Cucsa.165620 (gene) Cucumber (Gy14) v1

NameCucsa.165620
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionPlant protein 1589 of unknown function
Locationscaffold01153 : 959813 .. 960344 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGATTCTTCTGCTGCTTACATTCATATGGTAACGTTTTCACTTTCTCTTTCATATTAATTACTATAAATGTCTATCTTCTTTATATATTCATTCCCTTTCCCTTATATATAGGTACAACACTTGATCGAAAAGTGCTTGATCTTCCATATGAATAAAGATGAGTGTATTGAAGCTCTCTCCAAACATGCTAACATCAGCCCCATCATCACATCTACTGGTTCGTACGTTCACATTTTTTCTCCTCTCTTCTTCCACTCCTCATCATTTTCATCACAACCTAGATCACCAGTACTACTGCAGACAAATTGTATACACACACACACACATATATATATAGATGTAGATTCTTTGATCTTATAGGTGATTGTTTTAATCTGTTGTTACAGTGTGGAAGGAGTTGGAGAAAGAAAATAGGGAATTCTTTGAAGCTTATTCAGAATGTAAGGGAAGAAATGATAGAATATTGGCTGAAGAAGAGACAAGGAAGTTAATCCAAAGGATGATGTCTAAACATAGTGATGACTAG

mRNA sequence

ATGGCTGATTCTTCTGCTGCTTACATTCATATGGTACAACACTTGATCGAAAAGTGCTTGATCTTCCATATGAATAAAGATGAGTGTATTGAAGCTCTCTCCAAACATGCTAACATCAGCCCCATCATCACATCTACTGTGTGGAAGGAGTTGGAGAAAGAAAATAGGGAATTCTTTGAAGCTTATTCAGAATGTAAGGGAAGAAATGATAGAATATTGGCTGAAGAAGAGACAAGGAAGTTAATCCAAAGGATGATGTCTAAACATAGTGATGACTAG

Coding sequence (CDS)

ATGGCTGATTCTTCTGCTGCTTACATTCATATGGTACAACACTTGATCGAAAAGTGCTTGATCTTCCATATGAATAAAGATGAGTGTATTGAAGCTCTCTCCAAACATGCTAACATCAGCCCCATCATCACATCTACTGTGTGGAAGGAGTTGGAGAAAGAAAATAGGGAATTCTTTGAAGCTTATTCAGAATGTAAGGGAAGAAATGATAGAATATTGGCTGAAGAAGAGACAAGGAAGTTAATCCAAAGGATGATGTCTAAACATAGTGATGACTAG

Protein sequence

MADSSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPIITSTVWKELEKENREFFEAYSECKGRNDRILAEEETRKLIQRMMSKHSDD*
BLAST of Cucsa.165620 vs. TrEMBL
Match: A0A0A0KQ71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G179770 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 1.8e-45
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1

Query: 1  MADSSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPIITSTVWKELEKENREFFE 60
          MADSSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPIITSTVWKELEKENREFFE
Sbjct: 1  MADSSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPIITSTVWKELEKENREFFE 60

Query: 61 AYSECKGRNDRILAEEETRKLIQRMMSKHSDD 93
          AYSECKGRNDRILAEEETRKLIQRMMSKHSDD
Sbjct: 61 AYSECKGRNDRILAEEETRKLIQRMMSKHSDD 92

BLAST of Cucsa.165620 vs. TrEMBL
Match: U5G530_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s21830g PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 4.4e-31
Identity = 66/91 (72.53%), Postives = 83/91 (91.21%), Query Frame = 1

Query: 1  MADSSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPIITSTVWKELEKENREFFE 60
          M DSSA+YIHMVQHLIEKCLIF+M K+EC+EALSKHANI P+ITSTVWKELEKEN+EFFE
Sbjct: 1  MGDSSASYIHMVQHLIEKCLIFNMTKEECMEALSKHANIEPVITSTVWKELEKENKEFFE 60

Query: 61 AYSECKGRNDRILAEEETRKLIQRMMSKHSD 92
          AY++ K ++DR ++EEET ++IQRM+S+ S+
Sbjct: 61 AYAQSKSKDDR-MSEEETSRVIQRMISQQSE 90

BLAST of Cucsa.165620 vs. TrEMBL
Match: B9SAL5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1103690 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 4.4e-31
Identity = 67/92 (72.83%), Postives = 82/92 (89.13%), Query Frame = 1

Query: 1  MADSSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPIITSTVWKELEKENREFFE 60
          M DSSA+YIHMVQHLIEKCLIFHM K+EC+EALSKHANI+P+ITSTVW ELEKEN+EFFE
Sbjct: 1  MGDSSASYIHMVQHLIEKCLIFHMTKEECMEALSKHANITPVITSTVWNELEKENKEFFE 60

Query: 61 AYSECKGRNDRILAEEETRKLIQRMMSKHSDD 93
          AY E K ++DR ++EEET ++IQ+M+S+ S D
Sbjct: 61 AYIESKRKDDR-MSEEETSQMIQKMISESSKD 91

BLAST of Cucsa.165620 vs. TrEMBL
Match: W9R2B2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025422 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.1e-29
Identity = 64/92 (69.57%), Postives = 79/92 (85.87%), Query Frame = 1

Query: 1  MADSSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPIITSTVWKELEKENREFFE 60
          M DSSA+YIHMVQHLIEKCLIF MNK+EC+EALSKHANI P+ITSTVW ELEKEN+EFFE
Sbjct: 1  MGDSSASYIHMVQHLIEKCLIFRMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFE 60

Query: 61 AYSECKGRNDRILAEEETRKLIQRMMSKHSDD 93
          AY++ + + D+ ++EEET ++IQ+M S  S D
Sbjct: 61 AYAQSQSKEDK-MSEEETSQMIQKMFSDSSKD 91

BLAST of Cucsa.165620 vs. TrEMBL
Match: A0A151S7F0_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_027425 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 3.1e-29
Identity = 63/89 (70.79%), Postives = 80/89 (89.89%), Query Frame = 1

Query: 2  ADSSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPIITSTVWKELEKENREFFEA 61
          ++SSA+YIHMVQHLIEKCLIFHM+K+EC+EALSKHANI P+ITSTVW ELEKEN+EFFEA
Sbjct: 5  SNSSASYIHMVQHLIEKCLIFHMSKEECMEALSKHANIKPVITSTVWNELEKENKEFFEA 64

Query: 62 YSECKGRNDRILAEEETRKLIQRMMSKHS 91
          Y + K ++DR ++EEET ++IQ+M+S  S
Sbjct: 65 YKKVKSKDDR-MSEEETSQMIQKMISDSS 92

BLAST of Cucsa.165620 vs. TAIR10
Match: AT3G55240.1 (AT3G55240.1 Plant protein 1589 of unknown function)

HSP 1 Score: 133.3 bits (334), Expect = 7.9e-32
Identity = 65/96 (67.71%), Postives = 85/96 (88.54%), Query Frame = 1

Query: 1  MADSSAA-YIHMVQHLIEKCLIFHMNKDECIEALSKHANISPIITSTVWKELEKENREFF 60
          MADSS+A YIHMVQH+IEKCLIFHM+K+EC+EALSKHANI+P+ITSTVWKELEKEN+EFF
Sbjct: 1  MADSSSASYIHMVQHMIEKCLIFHMSKEECVEALSKHANITPVITSTVWKELEKENKEFF 60

Query: 61 EAYSECKGRNDRILAEEETRKLIQRMM---SKHSDD 93
          +AY E + + ++ ++EEET ++IQ+++   SK SDD
Sbjct: 61 KAYEERQSKQEQ-MSEEETNQMIQKIISDSSKESDD 95

BLAST of Cucsa.165620 vs. TAIR10
Match: AT5G02580.1 (AT5G02580.1 Plant protein 1589 of unknown function)

HSP 1 Score: 108.2 bits (269), Expect = 2.7e-24
Identity = 50/85 (58.82%), Postives = 67/85 (78.82%), Query Frame = 1

Query: 4  SSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPIITSTVWKELEKENREFFEAYS 63
          S A+YIH+V HLIE+C++F+M K+EC++AL KHANI PIITSTVWKEL KEN+EFFEAY 
Sbjct: 7  SQASYIHLVHHLIEECIVFNMGKEECMDALFKHANIKPIITSTVWKELAKENKEFFEAYE 66

Query: 64 ECKGRNDRILAEEETRKLIQRMMSK 89
              R + I  E+ET + I+ ++S+
Sbjct: 67 R---RREEIPTEKETARRIRDLLSR 88

BLAST of Cucsa.165620 vs. TAIR10
Match: AT3G28990.1 (AT3G28990.1 Plant protein 1589 of unknown function)

HSP 1 Score: 107.1 bits (266), Expect = 6.1e-24
Identity = 52/84 (61.90%), Postives = 68/84 (80.95%), Query Frame = 1

Query: 4  SSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPIITSTVWKELEKENREFFEAYS 63
          S A YIH+VQH+IE CL F+M+K+EC+EALS++ANI+PIITSTVWKEL KEN++FFE Y 
Sbjct: 5  SPAVYIHLVQHMIETCLTFNMSKEECMEALSENANINPIITSTVWKELVKENKDFFETY- 64

Query: 64 ECKGRNDRILAEEETRKLIQRMMS 88
          E K      ++EEET +LIQ ++S
Sbjct: 65 EQKLMKKESMSEEETNQLIQNIIS 87

BLAST of Cucsa.165620 vs. TAIR10
Match: AT1G10657.1 (AT1G10657.1 Plant protein 1589 of unknown function)

HSP 1 Score: 66.2 bits (160), Expect = 1.2e-11
Identity = 30/80 (37.50%), Postives = 46/80 (57.50%), Query Frame = 1

Query: 7   AYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPIITST-------------------- 63
           +YI MVQH+IE+C++  M +DEC++AL  HA+I P++T T                    
Sbjct: 22  SYIRMVQHMIERCILLRMTRDECVKALDHHASILPLVTLTVFSYILGFASVLQKKLHDIF 81

BLAST of Cucsa.165620 vs. TAIR10
Match: AT3G10250.1 (AT3G10250.1 Plant protein 1589 of unknown function)

HSP 1 Score: 63.5 bits (153), Expect = 7.7e-11
Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 1

Query: 9  IHMVQHLIEKCLIFHMNKDECIEALSKHANISPIITSTVWKELEKENREFFEAY 63
          I +VQ+LIE+CL  +MN+ E ++ L + A I P  T  VW++LE+ENREFF+AY
Sbjct: 14 IQLVQNLIERCLQLYMNQKEVVDTLLEQAKIEPGFTELVWQKLEEENREFFKAY 67

BLAST of Cucsa.165620 vs. NCBI nr
Match: gi|449459944|ref|XP_004147706.1| (PREDICTED: uncharacterized protein LOC101203417 [Cucumis sativus])

HSP 1 Score: 189.5 bits (480), Expect = 2.6e-45
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1

Query: 1  MADSSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPIITSTVWKELEKENREFFE 60
          MADSSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPIITSTVWKELEKENREFFE
Sbjct: 1  MADSSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPIITSTVWKELEKENREFFE 60

Query: 61 AYSECKGRNDRILAEEETRKLIQRMMSKHSDD 93
          AYSECKGRNDRILAEEETRKLIQRMMSKHSDD
Sbjct: 61 AYSECKGRNDRILAEEETRKLIQRMMSKHSDD 92

BLAST of Cucsa.165620 vs. NCBI nr
Match: gi|659123364|ref|XP_008461625.1| (PREDICTED: uncharacterized protein LOC103500185 [Cucumis melo])

HSP 1 Score: 183.0 bits (463), Expect = 2.5e-43
Identity = 90/93 (96.77%), Postives = 92/93 (98.92%), Query Frame = 1

Query: 1  MADSSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPIITSTVWKELEKENREFFE 60
          MADSSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISP+ITSTVWKELEKENREFFE
Sbjct: 1  MADSSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPVITSTVWKELEKENREFFE 60

Query: 61 AYSECKGRNDRILAEEETRKLIQR-MMSKHSDD 93
          AYSECKGRNDRILAEEETRKLIQR MMSKHSD+
Sbjct: 61 AYSECKGRNDRILAEEETRKLIQRMMMSKHSDE 93

BLAST of Cucsa.165620 vs. NCBI nr
Match: gi|255564072|ref|XP_002523034.1| (PREDICTED: uncharacterized protein LOC8260844 [Ricinus communis])

HSP 1 Score: 141.7 bits (356), Expect = 6.3e-31
Identity = 67/92 (72.83%), Postives = 82/92 (89.13%), Query Frame = 1

Query: 1  MADSSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPIITSTVWKELEKENREFFE 60
          M DSSA+YIHMVQHLIEKCLIFHM K+EC+EALSKHANI+P+ITSTVW ELEKEN+EFFE
Sbjct: 1  MGDSSASYIHMVQHLIEKCLIFHMTKEECMEALSKHANITPVITSTVWNELEKENKEFFE 60

Query: 61 AYSECKGRNDRILAEEETRKLIQRMMSKHSDD 93
          AY E K ++DR ++EEET ++IQ+M+S+ S D
Sbjct: 61 AYIESKRKDDR-MSEEETSQMIQKMISESSKD 91

BLAST of Cucsa.165620 vs. NCBI nr
Match: gi|743844026|ref|XP_011027103.1| (PREDICTED: uncharacterized protein LOC105127482 [Populus euphratica])

HSP 1 Score: 141.7 bits (356), Expect = 6.3e-31
Identity = 66/91 (72.53%), Postives = 83/91 (91.21%), Query Frame = 1

Query: 1  MADSSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPIITSTVWKELEKENREFFE 60
          M DSSA+YIHMVQHLIEKCLIF+M K+EC+EALSKHANI P+ITSTVWKELEKEN+EFFE
Sbjct: 1  MGDSSASYIHMVQHLIEKCLIFNMTKEECMEALSKHANIEPVITSTVWKELEKENKEFFE 60

Query: 61 AYSECKGRNDRILAEEETRKLIQRMMSKHSD 92
          AY++ K ++DR ++EEET ++IQRM+S+ S+
Sbjct: 61 AYAQSKSKDDR-MSEEETSRVIQRMISQQSE 90

BLAST of Cucsa.165620 vs. NCBI nr
Match: gi|566192088|ref|XP_006378740.1| (hypothetical protein POPTR_0010s21830g [Populus trichocarpa])

HSP 1 Score: 141.7 bits (356), Expect = 6.3e-31
Identity = 66/91 (72.53%), Postives = 83/91 (91.21%), Query Frame = 1

Query: 1  MADSSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPIITSTVWKELEKENREFFE 60
          M DSSA+YIHMVQHLIEKCLIF+M K+EC+EALSKHANI P+ITSTVWKELEKEN+EFFE
Sbjct: 1  MGDSSASYIHMVQHLIEKCLIFNMTKEECMEALSKHANIEPVITSTVWKELEKENKEFFE 60

Query: 61 AYSECKGRNDRILAEEETRKLIQRMMSKHSD 92
          AY++ K ++DR ++EEET ++IQRM+S+ S+
Sbjct: 61 AYAQSKSKDDR-MSEEETSRVIQRMISQQSE 90

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KQ71_CUCSA1.8e-45100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G179770 PE=4 SV=1[more]
U5G530_POPTR4.4e-3172.53Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s21830g PE=4 SV=1[more]
B9SAL5_RICCO4.4e-3172.83Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1103690 PE=4 SV=1[more]
W9R2B2_9ROSA1.1e-2969.57Uncharacterized protein OS=Morus notabilis GN=L484_025422 PE=4 SV=1[more]
A0A151S7F0_CAJCA3.1e-2970.79Uncharacterized protein OS=Cajanus cajan GN=KK1_027425 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G55240.17.9e-3267.71 Plant protein 1589 of unknown function[more]
AT5G02580.12.7e-2458.82 Plant protein 1589 of unknown function[more]
AT3G28990.16.1e-2461.90 Plant protein 1589 of unknown function[more]
AT1G10657.11.2e-1137.50 Plant protein 1589 of unknown function[more]
AT3G10250.17.7e-1151.85 Plant protein 1589 of unknown function[more]
Match NameE-valueIdentityDescription
gi|449459944|ref|XP_004147706.1|2.6e-45100.00PREDICTED: uncharacterized protein LOC101203417 [Cucumis sativus][more]
gi|659123364|ref|XP_008461625.1|2.5e-4396.77PREDICTED: uncharacterized protein LOC103500185 [Cucumis melo][more]
gi|255564072|ref|XP_002523034.1|6.3e-3172.83PREDICTED: uncharacterized protein LOC8260844 [Ricinus communis][more]
gi|743844026|ref|XP_011027103.1|6.3e-3172.53PREDICTED: uncharacterized protein LOC105127482 [Populus euphratica][more]
gi|566192088|ref|XP_006378740.1|6.3e-3172.53hypothetical protein POPTR_0010s21830g [Populus trichocarpa][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006476CHP01589_pln
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032502 developmental process
biological_process GO:0006635 fatty acid beta-oxidation
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0016829 lyase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.165620.1Cucsa.165620.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006476Conserved hypothetical protein CHP01589, plantPFAMPF09713A_thal_3526coord: 12..63
score: 6.9
IPR006476Conserved hypothetical protein CHP01589, plantTIGRFAMsTIGR01589TIGR01589coord: 9..63
score: 7.8
NoneNo IPR availablePANTHERPTHR31871FAMILY NOT NAMEDcoord: 1..91
score: 8.4
NoneNo IPR availablePANTHERPTHR31871:SF10GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K5K13coord: 1..91
score: 8.4

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.165620Cla020114Watermelon (97103) v1cgywmB310
Cucsa.165620Cla018239Watermelon (97103) v1cgywmB309
Cucsa.165620Csa4G293290Cucumber (Chinese Long) v2cgycuB250
Cucsa.165620Csa5G505220Cucumber (Chinese Long) v2cgycuB252
Cucsa.165620Csa5G179770Cucumber (Chinese Long) v2cgycuB251
Cucsa.165620MELO3C025477Melon (DHL92) v3.5.1cgymeB289
Cucsa.165620MELO3C003098Melon (DHL92) v3.5.1cgymeB295
Cucsa.165620MELO3C023827Melon (DHL92) v3.5.1cgymeB290
Cucsa.165620ClCG04G008500Watermelon (Charleston Gray)cgywcgB293
Cucsa.165620ClCG02G013460Watermelon (Charleston Gray)cgywcgB290
Cucsa.165620CSPI05G09280Wild cucumber (PI 183967)cgycpiB258
Cucsa.165620CSPI04G14310Wild cucumber (PI 183967)cgycpiB257
Cucsa.165620CSPI05G17220Wild cucumber (PI 183967)cgycpiB259
Cucsa.165620CmaCh04G002350Cucurbita maxima (Rimu)cgycmaB0471
Cucsa.165620CmaCh03G004470Cucurbita maxima (Rimu)cgycmaB0470
Cucsa.165620CmaCh04G012100Cucurbita maxima (Rimu)cgycmaB0472
Cucsa.165620CmoCh03G004600Cucurbita moschata (Rifu)cgycmoB0473
Cucsa.165620CmoCh04G002410Cucurbita moschata (Rifu)cgycmoB0474
Cucsa.165620CmoCh04G012840Cucurbita moschata (Rifu)cgycmoB0475
Cucsa.165620Lsi01G013950Bottle gourd (USVL1VR-Ls)cgylsiB273
Cucsa.165620Cp4.1LG01g04700Cucurbita pepo (Zucchini)cgycpeB0457
Cucsa.165620Cp4.1LG01g10650Cucurbita pepo (Zucchini)cgycpeB0458
Cucsa.165620Cp4.1LG10g08770Cucurbita pepo (Zucchini)cgycpeB0453
Cucsa.165620MELO3C025477.2Melon (DHL92) v3.6.1cgymedB284
Cucsa.165620MELO3C023827.2Melon (DHL92) v3.6.1cgymedB285
Cucsa.165620MELO3C003098.2Melon (DHL92) v3.6.1cgymedB288
Cucsa.165620CsaV3_4G024650Cucumber (Chinese Long) v3cgycucB263
Cucsa.165620CsaV3_5G006690Cucumber (Chinese Long) v3cgycucB264
Cucsa.165620CsaV3_5G026200Cucumber (Chinese Long) v3cgycucB265
Cucsa.165620Cla97C02G039130Watermelon (97103) v2cgywmbB290
Cucsa.165620Cla97C04G075200Watermelon (97103) v2cgywmbB293
Cucsa.165620Cla97C09G181630Watermelon (97103) v2cgywmbB296
Cucsa.165620Bhi03G001249Wax gourdcgywgoB336
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cucsa.165620Cucsa.065880Cucumber (Gy14) v1cgycgyB015