Cucsa.165620 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGATTCTTCTGCTGCTTACATTCATATGGTAACGTTTTCACTTTCTCTTTCATATTAATTACTATAAATGTCTATCTTCTTTATATATTCATTCCCTTTCCCTTATATATAGGTACAACACTTGATCGAAAAGTGCTTGATCTTCCATATGAATAAAGATGAGTGTATTGAAGCTCTCTCCAAACATGCTAACATCAGCCCCATCATCACATCTACTGGTTCGTACGTTCACATTTTTTCTCCTCTCTTCTTCCACTCCTCATCATTTTCATCACAACCTAGATCACCAGTACTACTGCAGACAAATTGTATACACACACACACACATATATATATAGATGTAGATTCTTTGATCTTATAGGTGATTGTTTTAATCTGTTGTTACAGTGTGGAAGGAGTTGGAGAAAGAAAATAGGGAATTCTTTGAAGCTTATTCAGAATGTAAGGGAAGAAATGATAGAATATTGGCTGAAGAAGAGACAAGGAAGTTAATCCAAAGGATGATGTCTAAACATAGTGATGACTAG ATGGCTGATTCTTCTGCTGCTTACATTCATATGGTACAACACTTGATCGAAAAGTGCTTGATCTTCCATATGAATAAAGATGAGTGTATTGAAGCTCTCTCCAAACATGCTAACATCAGCCCCATCATCACATCTACTGTGTGGAAGGAGTTGGAGAAAGAAAATAGGGAATTCTTTGAAGCTTATTCAGAATGTAAGGGAAGAAATGATAGAATATTGGCTGAAGAAGAGACAAGGAAGTTAATCCAAAGGATGATGTCTAAACATAGTGATGACTAG ATGGCTGATTCTTCTGCTGCTTACATTCATATGGTACAACACTTGATCGAAAAGTGCTTGATCTTCCATATGAATAAAGATGAGTGTATTGAAGCTCTCTCCAAACATGCTAACATCAGCCCCATCATCACATCTACTGTGTGGAAGGAGTTGGAGAAAGAAAATAGGGAATTCTTTGAAGCTTATTCAGAATGTAAGGGAAGAAATGATAGAATATTGGCTGAAGAAGAGACAAGGAAGTTAATCCAAAGGATGATGTCTAAACATAGTGATGACTAG MADSSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPIITSTVWKELEKENREFFEAYSECKGRNDRILAEEETRKLIQRMMSKHSDD*
BLAST of Cucsa.165620 vs. TrEMBL
Match: A0A0A0KQ71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G179770 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 1.8e-45 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1
BLAST of Cucsa.165620 vs. TrEMBL
Match: U5G530_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s21830g PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 4.4e-31 Identity = 66/91 (72.53%), Postives = 83/91 (91.21%), Query Frame = 1
BLAST of Cucsa.165620 vs. TrEMBL
Match: B9SAL5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1103690 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 4.4e-31 Identity = 67/92 (72.83%), Postives = 82/92 (89.13%), Query Frame = 1
BLAST of Cucsa.165620 vs. TrEMBL
Match: W9R2B2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025422 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 1.1e-29 Identity = 64/92 (69.57%), Postives = 79/92 (85.87%), Query Frame = 1
BLAST of Cucsa.165620 vs. TrEMBL
Match: A0A151S7F0_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_027425 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 3.1e-29 Identity = 63/89 (70.79%), Postives = 80/89 (89.89%), Query Frame = 1
BLAST of Cucsa.165620 vs. TAIR10
Match: AT3G55240.1 (AT3G55240.1 Plant protein 1589 of unknown function) HSP 1 Score: 133.3 bits (334), Expect = 7.9e-32 Identity = 65/96 (67.71%), Postives = 85/96 (88.54%), Query Frame = 1
BLAST of Cucsa.165620 vs. TAIR10
Match: AT5G02580.1 (AT5G02580.1 Plant protein 1589 of unknown function) HSP 1 Score: 108.2 bits (269), Expect = 2.7e-24 Identity = 50/85 (58.82%), Postives = 67/85 (78.82%), Query Frame = 1
BLAST of Cucsa.165620 vs. TAIR10
Match: AT3G28990.1 (AT3G28990.1 Plant protein 1589 of unknown function) HSP 1 Score: 107.1 bits (266), Expect = 6.1e-24 Identity = 52/84 (61.90%), Postives = 68/84 (80.95%), Query Frame = 1
BLAST of Cucsa.165620 vs. TAIR10
Match: AT1G10657.1 (AT1G10657.1 Plant protein 1589 of unknown function) HSP 1 Score: 66.2 bits (160), Expect = 1.2e-11 Identity = 30/80 (37.50%), Postives = 46/80 (57.50%), Query Frame = 1
BLAST of Cucsa.165620 vs. TAIR10
Match: AT3G10250.1 (AT3G10250.1 Plant protein 1589 of unknown function) HSP 1 Score: 63.5 bits (153), Expect = 7.7e-11 Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 1
BLAST of Cucsa.165620 vs. NCBI nr
Match: gi|449459944|ref|XP_004147706.1| (PREDICTED: uncharacterized protein LOC101203417 [Cucumis sativus]) HSP 1 Score: 189.5 bits (480), Expect = 2.6e-45 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1
BLAST of Cucsa.165620 vs. NCBI nr
Match: gi|659123364|ref|XP_008461625.1| (PREDICTED: uncharacterized protein LOC103500185 [Cucumis melo]) HSP 1 Score: 183.0 bits (463), Expect = 2.5e-43 Identity = 90/93 (96.77%), Postives = 92/93 (98.92%), Query Frame = 1
BLAST of Cucsa.165620 vs. NCBI nr
Match: gi|255564072|ref|XP_002523034.1| (PREDICTED: uncharacterized protein LOC8260844 [Ricinus communis]) HSP 1 Score: 141.7 bits (356), Expect = 6.3e-31 Identity = 67/92 (72.83%), Postives = 82/92 (89.13%), Query Frame = 1
BLAST of Cucsa.165620 vs. NCBI nr
Match: gi|743844026|ref|XP_011027103.1| (PREDICTED: uncharacterized protein LOC105127482 [Populus euphratica]) HSP 1 Score: 141.7 bits (356), Expect = 6.3e-31 Identity = 66/91 (72.53%), Postives = 83/91 (91.21%), Query Frame = 1
BLAST of Cucsa.165620 vs. NCBI nr
Match: gi|566192088|ref|XP_006378740.1| (hypothetical protein POPTR_0010s21830g [Populus trichocarpa]) HSP 1 Score: 141.7 bits (356), Expect = 6.3e-31 Identity = 66/91 (72.53%), Postives = 83/91 (91.21%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |