BLAST of Cucsa.160980 vs. Swiss-Prot
Match:
SIGC_ARATH (RNA polymerase sigma factor sigC OS=Arabidopsis thaliana GN=SIGC PE=2 SV=1)
HSP 1 Score: 383.6 bits (984), Expect = 3.0e-105
Identity = 212/444 (47.75%), Postives = 298/444 (67.12%), Query Frame = 1
Query: 41 FGILMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSR---TLKTSSFHDSS 100
+ +L +NL LEETF + +ERDI+LQ+ KLGA E F TCLSR + TS D++
Sbjct: 148 YNLLAKNLLALEETFVALDSVRMERDIMLQMGKLGAAELFKTCLSRYRGSSITSCLSDTT 207
Query: 101 GLPIEGGEDHNVNQKTNDQNDNVTVYSAKKAGRRSVKKRAM------DNADKIASRLLTT 160
L D N V+ + RR VKK+A +N D+ +S +
Sbjct: 208 ELV--------------DTTPNQQVFVSS---RRKVKKKARRSSVTAENGDQ-SSLPIGL 267
Query: 161 RAVKEKIHRSTVFSRKKSSNSSKRRLIVAINEAEMSTGVKVVANLERIRETLEKESGRIA 220
R I V ++ K+R ++ NE EMSTGVK+VA++ERIR LE+ESG++A
Sbjct: 268 RTTWNNIDVPRV---RRPPKYRKKRERISRNETEMSTGVKIVADMERIRTQLEEESGKVA 327
Query: 221 SMSCWAEAASVDIKDLQKQLQFGSFCRDELLRSTNSLVVFLAKKYRCSGLPMEDLVQAGA 280
S+SCWA AA ++ K L + L +G +CRDEL++ST SLV+FLA+ YR G+ EDL+QAG
Sbjct: 328 SLSCWAAAAGMNEKLLMRNLHYGWYCRDELVKSTRSLVLFLARNYRGLGIAHEDLIQAGY 387
Query: 281 LGVLQGVERFDPKRGFRISTYIQYWIRKSMSRVVARNSRGIQIPRSLTKAINQIQKARKV 340
+GVLQG ERFD RG++ STY+QYWIRKSMS +V+R++RG+ IP S+ + IN IQKARK
Sbjct: 388 VGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHIPSSIIRTINHIQKARKT 447
Query: 341 L--NHSGRRYSDDDIARATGLPLAKVRVASNCLKVVGSNDQKMGDGVNMKYMEFTADMSI 400
L +H + +D++IA+ TG + K+R A+ CLKVVGS D+K+GD K++EFT D ++
Sbjct: 448 LKTSHGIKYAADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKVGDCFTTKFLEFTPDTTM 507
Query: 401 QSPEETVKRKLMKKDIFNILQRLESRERQVLVLRYGLVDFEPKSLEEIGKLLHISKEWVR 460
+SPEE V R+ ++DI ++L+ LE RE+QV+VLRYGL D+ PKSLEEIGKLL +SKEW+R
Sbjct: 508 ESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKLLKVSKEWIR 567
Query: 461 KIEKKAMTKLKNEETVKHLSHYLD 474
KIE++AM KL+++ + L +YL+
Sbjct: 568 KIERRAMAKLRDQPNAEDLRYYLN 570
BLAST of Cucsa.160980 vs. Swiss-Prot
Match:
SIGB_ARATH (RNA polymerase sigma factor sigB OS=Arabidopsis thaliana GN=SIGB PE=2 SV=2)
HSP 1 Score: 214.9 bits (546), Expect = 1.9e-54
Identity = 122/399 (30.58%), Postives = 229/399 (57.39%), Query Frame = 1
Query: 81 NTCLSRTLKTSSFHDSSGLPIEGGEDHNVNQKTNDQNDNVTVYSAKKAGRRSVKKRAMDN 140
N +S + S+ + S +E + V + ++ V S ++ R++ + + ++
Sbjct: 171 NGIVSDKITASASNKESIGDLESEKQEEVELLEEQPSVSLAVRSTRQTERKARRAKGLEK 230
Query: 141 AD------KIASRLLTTRAVKEKIHRSTVFSRKKSSNSSKRRLIVAINEAEMSTGVKVVA 200
K S R V +++ + + + SS + L V E E+S G++ +
Sbjct: 231 TASGIPSVKTGSSPKKKRLVAQEVDHNDPLRYLRMTTSSSKLLTVR-EEHELSAGIQDLL 290
Query: 201 NLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGSFCRDELLRSTNSLVVFLAK 260
LER++ L + SGR + + WA AA VD K L++++ G+ C+D++++S LV+ +AK
Sbjct: 291 KLERLQTELTERSGRQPTFAQWASAAGVDQKSLRQRIHHGTLCKDKMIKSNIRLVISIAK 350
Query: 261 KYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRISTYIQYWIRKSMSRVVARNSRGIQI 320
Y+ +G+ ++DLVQ G G+++G E+FD +GF+ STY +WI++++ + ++ SR I++
Sbjct: 351 NYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRL 410
Query: 321 PRSLTKAINQIQKARKVL-NHSGRRYSDDDIARATGLPLAKVRVASNCLKVVGSNDQKMG 380
P + +A ++++ARK L + +G+ +++IA ATGL + ++ K S DQK+G
Sbjct: 411 PFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGLSMKRLMAVLLSPKPPRSLDQKIG 470
Query: 381 DGVNMKYMEFTADMSIQSPEETVKRKLMKKDIFNILQRLESRERQVLVLRYGLVDFEPKS 440
N+K E AD + E+ + ++ M++D+ +L L +RE+QV+ R+G+ D K+
Sbjct: 471 MNQNLKPSEVIADPEAVTSEDILIKEFMRQDLDKVLDSLGTREKQVIRWRFGMEDGRMKT 530
Query: 441 LEEIGKLLHISKEWVRKIEKKAMTKLKNEETVKHLSHYL 473
L+EIG+++ +S+E VR+IE A KLKN++ HL YL
Sbjct: 531 LQEIGEMMGVSRERVRQIESSAFRKLKNKKRNNHLQQYL 568
BLAST of Cucsa.160980 vs. Swiss-Prot
Match:
SIGA_NOSS1 (RNA polymerase sigma factor SigA OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=sigA PE=3 SV=1)
HSP 1 Score: 186.0 bits (471), Expect = 9.3e-46
Identity = 105/322 (32.61%), Postives = 190/322 (59.01%), Query Frame = 1
Query: 152 RAVKEKIHRSTVFSRKKSSNSSKRRLIVAINEAEMSTGVKVVANLERIRETLEKESGRIA 211
R +K H + R + RL+ A E E++ + + LER+RE L ++ R
Sbjct: 69 RTQSKKKHYTEDSIRLYLQEIGRIRLLRADEEIELARKIADLLELERVRERLSEKLERDP 128
Query: 212 SMSCWAEAASVDIKDLQKQLQFGSFCRDELLRSTNSLVVFLAKKYRCSGLPMEDLVQAGA 271
S WAEA + + + +L G +D++++S LVV +AKKY GL +DL+Q G+
Sbjct: 129 RDSEWAEAVQLPLPAFRYRLHIGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGS 188
Query: 272 LGVLQGVERFDPKRGFRISTYIQYWIRKSMSRVVARNSRGIQIPRSLTKAINQIQKARKV 331
LG+++ E+FD ++G++ STY +WIR++++R +A SR I++P L + I++I+K K+
Sbjct: 189 LGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKL 248
Query: 332 LNHS-GRRYSDDDIARATGLPLAKVRVASNCLKVVGSNDQKMGDGVNMKYMEFTADMSIQ 391
L+ GR+ ++++IA + + K+R + ++ S + +G + + +F + +
Sbjct: 249 LSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDF-IESDGE 308
Query: 392 SPEETVKRKLMKKDIFNILQRLESRERQVLVLRYGLVDFEPKSLEEIGKLLHISKEWVRK 451
+PE+ V + L+++D+ +L L RER VL LRYGL D K+LEEIG++ ++++E +R+
Sbjct: 309 TPEDQVSKNLLREDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQ 368
Query: 452 IEKKAMTKLKNEETVKHLSHYL 473
IE KA+ KL++ L Y+
Sbjct: 369 IEAKALRKLRHPNRNSVLKEYI 389
BLAST of Cucsa.160980 vs. Swiss-Prot
Match:
SIGA1_SYNE7 (RNA polymerase sigma factor SigA1 OS=Synechococcus elongatus (strain PCC 7942) GN=sigA1 PE=3 SV=2)
HSP 1 Score: 184.9 bits (468), Expect = 2.1e-45
Identity = 107/339 (31.56%), Postives = 198/339 (58.41%), Query Frame = 1
Query: 137 AMDNADKIASRLLTTRAVKEKIHRSTVFS--RKKSSNSSKRRLIVAINEAEMSTGVKVVA 196
A+D+ D + K K+ ++ R + RL+ A E E++ + +
Sbjct: 61 AIDDEDSVGEDEDAAAKAKAKVRKTYTEDSIRLYLQEIGRIRLLRADEEIELARQIADLL 120
Query: 197 NLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGSFCRDELLRSTNSLVVFLAK 256
LERIR+ L ++ R+ S + WA A + + +++L G +D++++S LVV +AK
Sbjct: 121 ALERIRDELLEQLDRLPSDAEWAAAVDSPLDEFRRRLFRGRRAKDKMVQSNLRLVVSIAK 180
Query: 257 KYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRISTYIQYWIRKSMSRVVARNSRGIQI 316
KY GL +DL+Q G+LG+++ E+FD ++G++ STY +WIR++++R +A SR I++
Sbjct: 181 KYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRL 240
Query: 317 PRSLTKAINQIQKARKVLNHS-GRRYSDDDIARATGLPLAKVRVASNCLKVVGSNDQKMG 376
P L + I++I+K K+L+ GR+ ++++IA + + K+R + ++ S + +G
Sbjct: 241 PVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIG 300
Query: 377 DGVNMKYMEFTADMSIQSPEETVKRKLMKKDIFNILQRLESRERQVLVLRYGLVDFEPKS 436
+ + +F + ++PE+ V + L+++D+ +L L RER VL LRYGL D K+
Sbjct: 301 KEEDSRLGDF-IEADGETPEDEVAKNLLREDLEGVLSTLSPRERDVLRLRYGLDDGRMKT 360
Query: 437 LEEIGKLLHISKEWVRKIEKKAMTKLKNEETVKHLSHYL 473
LEEIG+L ++++E +R+IE KA+ KL++ L Y+
Sbjct: 361 LEEIGQLFNVTRERIRQIEAKALRKLRHPNRNSILKEYI 398
BLAST of Cucsa.160980 vs. Swiss-Prot
Match:
SIGF_ARATH (RNA polymerase sigma factor sigF, chloroplastic OS=Arabidopsis thaliana GN=SIGF PE=1 SV=1)
HSP 1 Score: 170.2 bits (430), Expect = 5.3e-41
Identity = 92/300 (30.67%), Postives = 174/300 (58.00%), Query Frame = 1
Query: 175 RRLIVAINEAEMSTGVKVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFG 234
++L+ A EAE+ + ++ + LE+++ LE ++G ++ WAEA + L+ + G
Sbjct: 245 KQLLTAKEEAELISHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPVLKSDIHRG 304
Query: 235 SFCRDELLRSTNSLVVFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRISTYIQ 294
R++L+ + LVV +AK+Y+ GL +DL+Q G++G+++ VE+F P+ G R +TY
Sbjct: 305 RSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAY 364
Query: 295 YWIRKSMSRVVARNSRGIQIPRSLTKAINQIQKARKVLNHSGR-RYSDDDIARATGLPLA 354
+WIR+S+ + + +NSR I++P ++ + ++ +ARK G R S +++A G+
Sbjct: 365 WWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEELAGHVGVSTE 424
Query: 355 KVRVASNCLKVVGSNDQKMGDGVNMKYMEFTADMSIQSPEETVKRKLMKKDIFNILQRLE 414
K+ + S Q + + + E T D I++P +V ++LM+ + N+L L
Sbjct: 425 KLDKLLYNTRTPLSMQQPIWSDQDTTFQEITPDSGIETPTMSVGKQLMRNHVRNLLNVLS 484
Query: 415 SRERQVLVLRYGLVDFEPKSLEEIGKLLHISKEWVRKIEKKAMTKLKNEETVKHLSHYLD 474
+ER+++ LR+G+ + +SL EIG++ +SKE VR++E +A+ +LK L Y D
Sbjct: 485 PKERRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMNSHGLHAYAD 544
BLAST of Cucsa.160980 vs. TrEMBL
Match:
A0A0A0LLW1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G372830 PE=4 SV=1)
HSP 1 Score: 920.6 bits (2378), Expect = 7.7e-265
Identity = 473/473 (100.00%), Postives = 473/473 (100.00%), Query Frame = 1
Query: 1 MNSGAKSLGPMHYGIKSTRPSKVEDNFSSCTSLPTGKASPFGILMENLDVLEETFTESGM 60
MNSGAKSLGPMHYGIKSTRPSKVEDNFSSCTSLPTGKASPFGILMENLDVLEETFTESGM
Sbjct: 88 MNSGAKSLGPMHYGIKSTRPSKVEDNFSSCTSLPTGKASPFGILMENLDVLEETFTESGM 147
Query: 61 LSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDSSGLPIEGGEDHNVNQKTNDQNDNV 120
LSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDSSGLPIEGGEDHNVNQKTNDQNDNV
Sbjct: 148 LSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDSSGLPIEGGEDHNVNQKTNDQNDNV 207
Query: 121 TVYSAKKAGRRSVKKRAMDNADKIASRLLTTRAVKEKIHRSTVFSRKKSSNSSKRRLIVA 180
TVYSAKKAGRRSVKKRAMDNADKIASRLLTTRAVKEKIHRSTVFSRKKSSNSSKRRLIVA
Sbjct: 208 TVYSAKKAGRRSVKKRAMDNADKIASRLLTTRAVKEKIHRSTVFSRKKSSNSSKRRLIVA 267
Query: 181 INEAEMSTGVKVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGSFCRDE 240
INEAEMSTGVKVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGSFCRDE
Sbjct: 268 INEAEMSTGVKVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGSFCRDE 327
Query: 241 LLRSTNSLVVFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRISTYIQYWIRKS 300
LLRSTNSLVVFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRISTYIQYWIRKS
Sbjct: 328 LLRSTNSLVVFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRISTYIQYWIRKS 387
Query: 301 MSRVVARNSRGIQIPRSLTKAINQIQKARKVLNHSGRRYSDDDIARATGLPLAKVRVASN 360
MSRVVARNSRGIQIPRSLTKAINQIQKARKVLNHSGRRYSDDDIARATGLPLAKVRVASN
Sbjct: 388 MSRVVARNSRGIQIPRSLTKAINQIQKARKVLNHSGRRYSDDDIARATGLPLAKVRVASN 447
Query: 361 CLKVVGSNDQKMGDGVNMKYMEFTADMSIQSPEETVKRKLMKKDIFNILQRLESRERQVL 420
CLKVVGSNDQKMGDGVNMKYMEFTADMSIQSPEETVKRKLMKKDIFNILQRLESRERQVL
Sbjct: 448 CLKVVGSNDQKMGDGVNMKYMEFTADMSIQSPEETVKRKLMKKDIFNILQRLESRERQVL 507
Query: 421 VLRYGLVDFEPKSLEEIGKLLHISKEWVRKIEKKAMTKLKNEETVKHLSHYLD 474
VLRYGLVDFEPKSLEEIGKLLHISKEWVRKIEKKAMTKLKNEETVKHLSHYLD
Sbjct: 508 VLRYGLVDFEPKSLEEIGKLLHISKEWVRKIEKKAMTKLKNEETVKHLSHYLD 560
BLAST of Cucsa.160980 vs. TrEMBL
Match:
A0A061GKA9_THECC (RNApolymerase sigma-subunit C, putative OS=Theobroma cacao GN=TCM_037242 PE=4 SV=1)
HSP 1 Score: 506.1 bits (1302), Expect = 4.5e-140
Identity = 261/450 (58.00%), Postives = 346/450 (76.89%), Query Frame = 1
Query: 25 DNFSSCTSLPTGKASPFGILMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCL 84
D SS TS KAS + +LMENLDVLEETF +S +L+LER+I+LQL + GAL+ FNTCL
Sbjct: 399 DKSSSRTSPQACKASHYSLLMENLDVLEETFADSDVLTLEREILLQLGRFGALKLFNTCL 458
Query: 85 SRTLKTSSFHDSSGLPIEGGEDHNVNQKTNDQNDNVTVYSAKKAGRRSVKKRAMDNADKI 144
SRTLK S+ D S +P G D N+N + Q DN+ V S KK R+ +++RA++N I
Sbjct: 459 SRTLKASNILDLSDVPANSG-DCNMNLSVDGQKDNIVVCSRKKKQRKKIRERALENPTII 518
Query: 145 ASRLLTTRAVKEKIHRSTVFSRKKSSNSSKRRLIVAINEAEMSTGVKVVANLERIRETLE 204
+++L+ + + + + V S K+ S+S RRL +A NEAEMS GVKVVANLERIR TLE
Sbjct: 519 STQLMPSNTLHGRFQKPKVSSAKRVSDSRSRRLRIARNEAEMSKGVKVVANLERIRTTLE 578
Query: 205 KESGRIASMSCWAEAASVDIKDLQKQLQFGSFCRDELLRSTNSLVVFLAKKYRCSGLPME 264
+E+GR AS+SCWAEAA V K LQ+ L+FG +CRDELLRST SLV++ A+ YR G+ E
Sbjct: 579 EETGRAASLSCWAEAAGVSEKVLQQHLRFGWYCRDELLRSTRSLVLYFARNYRGLGIAHE 638
Query: 265 DLVQAGALGVLQGVERFDPKRGFRISTYIQYWIRKSMSRVVARNSRGIQIPRSLTKAINQ 324
DL+QAG+LGVLQG ERFD RG+R STY+Q+WIRKS+SR+VAR++RGIQ+P +L++AI Q
Sbjct: 639 DLIQAGSLGVLQGAERFDHTRGYRFSTYVQFWIRKSVSRIVARHARGIQVPCTLSRAIVQ 698
Query: 325 IQKARKVLNHSGRRYSDDD-IARATGLPLAKVRVASNCLKVVGSNDQKMGDGVNMKYMEF 384
IQKARK L+ S +Y D+D IA+ TGL LAK+R A+ C++VVGS DQK+GD +N KY+EF
Sbjct: 699 IQKARKALSKSHGKYPDEDAIAKFTGLSLAKIRSANKCMRVVGSIDQKIGDCMNAKYLEF 758
Query: 385 TADMSIQSPEETVKRKLMKKDIFNILQRLESRERQVLVLRYGLVDFEPKSLEEIGKLLHI 444
D+S++SPE+TV R+ MK+DI ++L L++RERQV+VLRYGL PKSLEEIG+L H+
Sbjct: 759 IPDLSVRSPEKTVMRQHMKEDIHDLLNGLDARERQVMVLRYGLKGSPPKSLEEIGRLFHV 818
Query: 445 SKEWVRKIEKKAMTKLKNEETVKHLSHYLD 474
SKEW+R+IE KAM KL+++ET ++LSHYLD
Sbjct: 819 SKEWIRRIEMKAMKKLRDKETCRNLSHYLD 847
BLAST of Cucsa.160980 vs. TrEMBL
Match:
A0A067KGK9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07709 PE=4 SV=1)
HSP 1 Score: 481.5 bits (1238), Expect = 1.2e-132
Identity = 258/474 (54.43%), Postives = 352/474 (74.26%), Query Frame = 1
Query: 4 GAKSLGPMHYGIKSTRPSKVEDNFSSCTSLPTGKASPFGILMENLDVLEETFTESGMLSL 63
G +SL ++ I + ED+F +S + S F +L+ENL++LEE+F +S +L L
Sbjct: 92 GKRSLSGLNDTIDDAQVFIKEDDFVPPSS-SKDRTSNFSLLLENLNILEESFADSDVLKL 151
Query: 64 ERDIVLQLTKLGALEFFNTCLSRTLK--TSSFHDSSGLPIEGGEDHNVNQKTNDQNDNVT 123
ERDI+LQL KLGAL+ FNTCL+RTL+ T++ D S LP E ++ + +N +
Sbjct: 152 ERDILLQLGKLGALKLFNTCLTRTLEVQTANVLDFSDLPTENIQECKRDGTSNGNVYKII 211
Query: 124 VYSAKKAGRRSVKKRA-MDNADKIASRLLTTRAVKEKIHRSTVFSRKKSSNSSKRRLIVA 183
V + KK R+S ++RA + N K+ L ++++ ++T F KK+SNS RRL++A
Sbjct: 212 VCTGKKEERKSRRERASLKNGHKVPCFPLPLKSIQNGRGKATSFD-KKTSNSKSRRLMIA 271
Query: 184 INEAEMSTGVKVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGSFCRDE 243
NEAEMS GVKV+ANLE+IR TLE+E+GR S+SCWAEAA +D+K LQ+QL FG +CRDE
Sbjct: 272 RNEAEMSRGVKVLANLEKIRTTLEQETGRAVSLSCWAEAAGLDMKVLQQQLHFGWYCRDE 331
Query: 244 LLRSTNSLVVFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRISTYIQYWIRKS 303
L+RST SLV+FLA+ YR G+ +EDL+QAG +GVLQG ERFD RG+R STY+QYWIRKS
Sbjct: 332 LVRSTRSLVLFLARNYRGMGIALEDLLQAGNMGVLQGAERFDDARGYRFSTYVQYWIRKS 391
Query: 304 MSRVVARNSRGIQIPRSLTKAINQIQKARKVLNHSGRRYSDD-DIARATGLPLAKVRVAS 363
MS++V+R++RGIQIP +L++AINQIQKARK L+ S +Y DD DIA TGL LAK+ AS
Sbjct: 392 MSKIVSRHARGIQIPCTLSRAINQIQKARKNLSASHGKYPDDEDIAEFTGLSLAKIESAS 451
Query: 364 NCLKVVGSNDQKMGDGVNMKYMEFTADMSIQSPEETVKRKLMKKDIFNILQRLESRERQV 423
CL+VVGS DQKMGD N KY+EF D +I+SPEE V R+ M KD+ ++L+ L++RERQV
Sbjct: 452 RCLRVVGSIDQKMGDCFNAKYLEFIHDTTIKSPEEAVMRQHMIKDMHDLLRGLDTRERQV 511
Query: 424 LVLRYGLVDFEPKSLEEIGKLLHISKEWVRKIEKKAMTKLKNEETVKHLSHYLD 474
L+LRYGL D +PKSLEEIG++ H+SKEWVR++EKK MT+L+NEET ++L +Y++
Sbjct: 512 LILRYGLKDHQPKSLEEIGRVFHVSKEWVRRLEKKVMTRLRNEETCRNLRYYVN 563
BLAST of Cucsa.160980 vs. TrEMBL
Match:
M5XDD1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003696mg PE=4 SV=1)
HSP 1 Score: 479.9 bits (1234), Expect = 3.5e-132
Identity = 253/451 (56.10%), Postives = 340/451 (75.39%), Query Frame = 1
Query: 24 EDNFSSCTSLPTGKASPFGILMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTC 83
E F S L AS F +L++NL+VLEETF S +L LE++I+LQL +LGAL+ F+ C
Sbjct: 106 EGKFISSKGLEACTASHFSLLLQNLNVLEETFATSDVLKLEKEILLQLARLGALKLFDIC 165
Query: 84 LSRTLKTSSFHDSSGLPIEGGEDHNVNQKTNDQNDNVTVYSAKKAGRRSVKKRAMDNADK 143
LSRTLKTSSF D S +P E+ + +K ++ + V S KK RRS +KR DNA
Sbjct: 166 LSRTLKTSSFLDLSDIPTVPVEEGKMERKEDNNVGEIIVRSGKKEERRS-RKRTSDNAI- 225
Query: 144 IASRLLTTRAVKEKIHRSTVFSRKKSSNSSKRRLIVAINEAEMSTGVKVVANLERIRETL 203
++S L + + + + + T+ S K++SN RRL ++ NEAEMS GVKV+A+LERI+ETL
Sbjct: 226 VSSNSLPPKTIWKGLKKPTLSSGKRASNYRSRRLTISKNEAEMSIGVKVIADLERIKETL 285
Query: 204 EKESGRIASMSCWAEAASVDIKDLQKQLQFGSFCRDELLRSTNSLVVFLAKKYRCSGLPM 263
EKE+G++A++ CWAEAA V K L + L+FG +C+DEL+RST SLV++LA+ YR G+ +
Sbjct: 286 EKETGKVATLRCWAEAAGVHEKVLLQHLRFGWYCQDELIRSTRSLVLYLARNYRGLGVAL 345
Query: 264 EDLVQAGALGVLQGVERFDPKRGFRISTYIQYWIRKSMSRVVARNSRGIQIPRSLTKAIN 323
+DL+QAG LG+LQG ERFD RG+R STY+QYWIRKSMSR+VA+++RG+QIP +L+KAIN
Sbjct: 346 DDLMQAGNLGLLQGAERFDHSRGYRFSTYVQYWIRKSMSRLVAQHARGVQIPFTLSKAIN 405
Query: 324 QIQKARKVLNHSGRRYSDD-DIARATGLPLAKVRVASNCLKVVGSNDQKMGDGVNMKYME 383
QIQKARK +S +Y DD +IA+ TGL LA++R AS CL+VVGS D KM + + YME
Sbjct: 406 QIQKARKANYNSHMKYPDDEEIAKITGLSLARIRSASTCLRVVGSVDHKMWESSDGTYME 465
Query: 384 FTADMSIQSPEETVKRKLMKKDIFNILQRLESRERQVLVLRYGLVDFEPKSLEEIGKLLH 443
FT D S++SPEETV R+ MKKDI ++L+ L RERQVLVLRYGL +++PKSLEEIG+L H
Sbjct: 466 FTPDTSLKSPEETVMRQHMKKDIHDLLKGLNLRERQVLVLRYGLNNYDPKSLEEIGRLFH 525
Query: 444 ISKEWVRKIEKKAMTKLKNEETVKHLSHYLD 474
+SKEW+RKIEKKA+ KL+ EE+ K+LSHYL+
Sbjct: 526 VSKEWIRKIEKKALMKLRVEESHKYLSHYLN 554
BLAST of Cucsa.160980 vs. TrEMBL
Match:
B9RRX0_RICCO (RNA polymerase sigma factor rpoD, putative OS=Ricinus communis GN=RCOM_0798990 PE=4 SV=1)
HSP 1 Score: 474.9 bits (1221), Expect = 1.1e-130
Identity = 251/478 (52.51%), Postives = 351/478 (73.43%), Query Frame = 1
Query: 1 MNSGAKSLGPMHYGIKSTRPSKV---EDNFSSCTSLPTGKASPFGILMENLDVLEETFTE 60
+N G +S H+G+ ++V ED F S +S + S F +L+ENL++LE++F +
Sbjct: 87 VNFGKRS----HFGLNIIGDAEVSLKEDIFVSPSSTKE-RTSRFSLLLENLNILEQSFAD 146
Query: 61 SGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDSSGLPIEGGEDHNVNQKTNDQN 120
S LE DI+LQL KLGAL+ FNTCL+RTL+T++ + S + E + N+N + +
Sbjct: 147 SDASKLEEDILLQLGKLGALKLFNTCLTRTLETTNVLEVSDVHTEIIGECNINGTSINNQ 206
Query: 121 DNVTVYSAKKAGRRSVKKRAMDN-ADKIASRLLTTRAVKEKIHRSTVFSRKKSSNSSKRR 180
V V++AKK R+S ++RA K S L +R ++ + TV S KK+S S RR
Sbjct: 207 IKVVVHTAKKEERKSRRERASARKGHKSPSLPLPSRPIQSGSEKPTVSSGKKASKSKSRR 266
Query: 181 LIVAINEAEMSTGVKVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGSF 240
LI+A NEAEM+ G+KV+A+LE+IR TLE+E+ R+ S+SCWAEAA +D+K LQ+QL FG +
Sbjct: 267 LIIARNEAEMARGIKVLADLEKIRTTLEEETERVVSLSCWAEAAGLDVKVLQQQLSFGWY 326
Query: 241 CRDELLRSTNSLVVFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRISTYIQYW 300
CRDEL++ST SLV++ A+ YR +G+ +EDL+QAG LGVL+G ERFD RG+R STY+QYW
Sbjct: 327 CRDELIKSTRSLVLYFARNYRGTGIALEDLLQAGNLGVLEGAERFDHTRGYRFSTYVQYW 386
Query: 301 IRKSMSRVVARNSRGIQIPRSLTKAINQIQKARKVLNHSGRRYSDDD-IARATGLPLAKV 360
IRKSMS++V+R +RGIQIP +L++AI QIQKARK L S +Y DDD IA+ TGL LAK+
Sbjct: 387 IRKSMSKIVSRLARGIQIPCTLSRAIYQIQKARKALTTSNGKYPDDDEIAKYTGLSLAKI 446
Query: 361 RVASNCLKVVGSNDQKMGDGVNMKYMEFTADMSIQSPEETVKRKLMKKDIFNILQRLESR 420
AS CL+VVGS DQK+G+ +N KY+EF D S+QSPEE V R+ M +D+ N+L+ L+SR
Sbjct: 447 ESASRCLRVVGSIDQKIGESLNAKYLEFLPDTSVQSPEEVVMRQHMIQDMHNLLRSLDSR 506
Query: 421 ERQVLVLRYGLVDFEPKSLEEIGKLLHISKEWVRKIEKKAMTKLKNEETVKHLSHYLD 474
ERQVL+LR+GL D++PKSLEEIG+ H+SKEWVR++EK+ MT+L+NEET ++L HY++
Sbjct: 507 ERQVLILRFGLNDYQPKSLEEIGRHFHVSKEWVRRLEKRVMTRLRNEETCRNLRHYIN 559
BLAST of Cucsa.160980 vs. TAIR10
Match:
AT3G53920.1 (AT3G53920.1 RNApolymerase sigma-subunit C)
HSP 1 Score: 383.6 bits (984), Expect = 1.7e-106
Identity = 212/444 (47.75%), Postives = 298/444 (67.12%), Query Frame = 1
Query: 41 FGILMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSR---TLKTSSFHDSS 100
+ +L +NL LEETF + +ERDI+LQ+ KLGA E F TCLSR + TS D++
Sbjct: 148 YNLLAKNLLALEETFVALDSVRMERDIMLQMGKLGAAELFKTCLSRYRGSSITSCLSDTT 207
Query: 101 GLPIEGGEDHNVNQKTNDQNDNVTVYSAKKAGRRSVKKRAM------DNADKIASRLLTT 160
L D N V+ + RR VKK+A +N D+ +S +
Sbjct: 208 ELV--------------DTTPNQQVFVSS---RRKVKKKARRSSVTAENGDQ-SSLPIGL 267
Query: 161 RAVKEKIHRSTVFSRKKSSNSSKRRLIVAINEAEMSTGVKVVANLERIRETLEKESGRIA 220
R I V ++ K+R ++ NE EMSTGVK+VA++ERIR LE+ESG++A
Sbjct: 268 RTTWNNIDVPRV---RRPPKYRKKRERISRNETEMSTGVKIVADMERIRTQLEEESGKVA 327
Query: 221 SMSCWAEAASVDIKDLQKQLQFGSFCRDELLRSTNSLVVFLAKKYRCSGLPMEDLVQAGA 280
S+SCWA AA ++ K L + L +G +CRDEL++ST SLV+FLA+ YR G+ EDL+QAG
Sbjct: 328 SLSCWAAAAGMNEKLLMRNLHYGWYCRDELVKSTRSLVLFLARNYRGLGIAHEDLIQAGY 387
Query: 281 LGVLQGVERFDPKRGFRISTYIQYWIRKSMSRVVARNSRGIQIPRSLTKAINQIQKARKV 340
+GVLQG ERFD RG++ STY+QYWIRKSMS +V+R++RG+ IP S+ + IN IQKARK
Sbjct: 388 VGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHIPSSIIRTINHIQKARKT 447
Query: 341 L--NHSGRRYSDDDIARATGLPLAKVRVASNCLKVVGSNDQKMGDGVNMKYMEFTADMSI 400
L +H + +D++IA+ TG + K+R A+ CLKVVGS D+K+GD K++EFT D ++
Sbjct: 448 LKTSHGIKYAADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKVGDCFTTKFLEFTPDTTM 507
Query: 401 QSPEETVKRKLMKKDIFNILQRLESRERQVLVLRYGLVDFEPKSLEEIGKLLHISKEWVR 460
+SPEE V R+ ++DI ++L+ LE RE+QV+VLRYGL D+ PKSLEEIGKLL +SKEW+R
Sbjct: 508 ESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKLLKVSKEWIR 567
Query: 461 KIEKKAMTKLKNEETVKHLSHYLD 474
KIE++AM KL+++ + L +YL+
Sbjct: 568 KIERRAMAKLRDQPNAEDLRYYLN 570
BLAST of Cucsa.160980 vs. TAIR10
Match:
AT1G08540.1 (AT1G08540.1 RNApolymerase sigma subunit 2)
HSP 1 Score: 214.9 bits (546), Expect = 1.1e-55
Identity = 122/399 (30.58%), Postives = 229/399 (57.39%), Query Frame = 1
Query: 81 NTCLSRTLKTSSFHDSSGLPIEGGEDHNVNQKTNDQNDNVTVYSAKKAGRRSVKKRAMDN 140
N +S + S+ + S +E + V + ++ V S ++ R++ + + ++
Sbjct: 171 NGIVSDKITASASNKESIGDLESEKQEEVELLEEQPSVSLAVRSTRQTERKARRAKGLEK 230
Query: 141 AD------KIASRLLTTRAVKEKIHRSTVFSRKKSSNSSKRRLIVAINEAEMSTGVKVVA 200
K S R V +++ + + + SS + L V E E+S G++ +
Sbjct: 231 TASGIPSVKTGSSPKKKRLVAQEVDHNDPLRYLRMTTSSSKLLTVR-EEHELSAGIQDLL 290
Query: 201 NLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGSFCRDELLRSTNSLVVFLAK 260
LER++ L + SGR + + WA AA VD K L++++ G+ C+D++++S LV+ +AK
Sbjct: 291 KLERLQTELTERSGRQPTFAQWASAAGVDQKSLRQRIHHGTLCKDKMIKSNIRLVISIAK 350
Query: 261 KYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRISTYIQYWIRKSMSRVVARNSRGIQI 320
Y+ +G+ ++DLVQ G G+++G E+FD +GF+ STY +WI++++ + ++ SR I++
Sbjct: 351 NYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRL 410
Query: 321 PRSLTKAINQIQKARKVL-NHSGRRYSDDDIARATGLPLAKVRVASNCLKVVGSNDQKMG 380
P + +A ++++ARK L + +G+ +++IA ATGL + ++ K S DQK+G
Sbjct: 411 PFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGLSMKRLMAVLLSPKPPRSLDQKIG 470
Query: 381 DGVNMKYMEFTADMSIQSPEETVKRKLMKKDIFNILQRLESRERQVLVLRYGLVDFEPKS 440
N+K E AD + E+ + ++ M++D+ +L L +RE+QV+ R+G+ D K+
Sbjct: 471 MNQNLKPSEVIADPEAVTSEDILIKEFMRQDLDKVLDSLGTREKQVIRWRFGMEDGRMKT 530
Query: 441 LEEIGKLLHISKEWVRKIEKKAMTKLKNEETVKHLSHYL 473
L+EIG+++ +S+E VR+IE A KLKN++ HL YL
Sbjct: 531 LQEIGEMMGVSRERVRQIESSAFRKLKNKKRNNHLQQYL 568
BLAST of Cucsa.160980 vs. TAIR10
Match:
AT2G36990.1 (AT2G36990.1 RNApolymerase sigma-subunit F)
HSP 1 Score: 170.2 bits (430), Expect = 3.0e-42
Identity = 92/300 (30.67%), Postives = 174/300 (58.00%), Query Frame = 1
Query: 175 RRLIVAINEAEMSTGVKVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFG 234
++L+ A EAE+ + ++ + LE+++ LE ++G ++ WAEA + L+ + G
Sbjct: 245 KQLLTAKEEAELISHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPVLKSDIHRG 304
Query: 235 SFCRDELLRSTNSLVVFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRISTYIQ 294
R++L+ + LVV +AK+Y+ GL +DL+Q G++G+++ VE+F P+ G R +TY
Sbjct: 305 RSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAY 364
Query: 295 YWIRKSMSRVVARNSRGIQIPRSLTKAINQIQKARKVLNHSGR-RYSDDDIARATGLPLA 354
+WIR+S+ + + +NSR I++P ++ + ++ +ARK G R S +++A G+
Sbjct: 365 WWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEELAGHVGVSTE 424
Query: 355 KVRVASNCLKVVGSNDQKMGDGVNMKYMEFTADMSIQSPEETVKRKLMKKDIFNILQRLE 414
K+ + S Q + + + E T D I++P +V ++LM+ + N+L L
Sbjct: 425 KLDKLLYNTRTPLSMQQPIWSDQDTTFQEITPDSGIETPTMSVGKQLMRNHVRNLLNVLS 484
Query: 415 SRERQVLVLRYGLVDFEPKSLEEIGKLLHISKEWVRKIEKKAMTKLKNEETVKHLSHYLD 474
+ER+++ LR+G+ + +SL EIG++ +SKE VR++E +A+ +LK L Y D
Sbjct: 485 PKERRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMNSHGLHAYAD 544
BLAST of Cucsa.160980 vs. TAIR10
Match:
AT5G13730.1 (AT5G13730.1 sigma factor 4)
HSP 1 Score: 150.6 bits (379), Expect = 2.4e-36
Identity = 100/304 (32.89%), Postives = 166/304 (54.61%), Query Frame = 1
Query: 172 SSKRRLIVAINEAEMSTGVKVVANLERIRETLEKE---SGRIASMSCWAEAASVDIKDLQ 231
+S+ + + E ++ +K A LE + ++E+ S +AS + ++ +I +
Sbjct: 117 ASRSGFLSRLEEVQLCLYLKEGAKLENLGTSVEENEMVSVLLASGRGKKKRSANEILCRR 176
Query: 232 KQLQFGSFCRDELLRSTNSLVVFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFR 291
K+ R+++ R LVV +A Y+ GL ++DL+Q G++G+L+G ERFDP RG++
Sbjct: 177 KE------AREKITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYK 236
Query: 292 ISTYIQYWIRKSMSRVVARNSRGIQIPRSLTKAINQIQKARKVLNHSGRRY-SDDDIARA 351
+STY+ +WI++++ R +A SR +++P S+ + ++ +A VL RR S ++IA
Sbjct: 237 LSTYVYWWIKQAILRAIAHKSRLVKLPGSMWELTAKVAEASNVLTRKLRRQPSCEEIAEH 296
Query: 352 TGLPLAKVRVASNCLKVVGSNDQKMGDGVNMKYMEFTADMSIQSPEETVKRKLMKKDIFN 411
L ++ VR+A + S D+ M E PEE VKR+ MK +I
Sbjct: 297 LNLNVSAVRLAVERSRSPVSLDRVASQNGRMTLQEIVRGPDETRPEEMVKREHMKHEIEQ 356
Query: 412 ILQRLESRERQVLVLRYGLVDFEPKSLEEIGKLLHISKEWVRKIEKKAMTKLKNEETVKH 471
+L L +RE +VL L +GL P S EEIGK L +S+E VR+I A+ KL+N V
Sbjct: 357 LLGSLTARESRVLGLYFGLNGETPMSFEEIGKSLKLSRERVRQINGIALKKLRNVHNVND 414
BLAST of Cucsa.160980 vs. TAIR10
Match:
AT1G64860.1 (AT1G64860.1 sigma factor A)
HSP 1 Score: 125.6 bits (314), Expect = 8.4e-29
Identity = 87/287 (30.31%), Postives = 150/287 (52.26%), Query Frame = 1
Query: 181 INEAEMSTGVKVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGSFCRDE 240
+ +S +K L+ + L+ G S A + + +LQ L R++
Sbjct: 203 VEVVRLSKKIKSGLRLDDHKSRLKDRLGCEPSDEQLAVSLKISRAELQAWLMECHLAREK 262
Query: 241 LLRSTNSLVVFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRISTYIQYWIRKS 300
L S LV+ +A++Y G M DLVQ G +G+L+G+E+FD +GFRISTY+ +WIR+
Sbjct: 263 LAMSNVRLVMSIAQRYDNLGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQG 322
Query: 301 MSRVVARNSRGIQIPRSLTKAINQIQKARKVLNHSGRRYSDDDIARATGLPLAKVRVASN 360
+SR + NSR +++P L + + I+ A+ L G S D IA + + KVR A+
Sbjct: 323 VSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEKGITPSIDRIAESLNMSQKKVRNATE 382
Query: 361 CLKVVGSNDQKMGDGVN----MKYMEFTADMSIQ-SPEETVKRKLMKKDIFNILQ-RLES 420
+ V S D+ +N + + AD ++ +P +K+++ ++ L
Sbjct: 383 AVSKVFSLDRDAFPSLNGLPGETHHSYIADTRLENNPWHGYDDLALKEEVSKLISATLGE 442
Query: 421 RERQVLVLRYGLVDFEPKSLEEIGKLLHISKEWVRKIEKKAMTKLKN 462
RE++++ L YGL D E + E+I K + +S+E VR++ A+ KLK+
Sbjct: 443 REKEIIRLYYGL-DKECLTWEDISKRIGLSRERVRQVGLVALEKLKH 488
BLAST of Cucsa.160980 vs. NCBI nr
Match:
gi|778671949|ref|XP_004148429.2| (PREDICTED: RNA polymerase sigma factor sigC [Cucumis sativus])
HSP 1 Score: 920.6 bits (2378), Expect = 1.1e-264
Identity = 473/473 (100.00%), Postives = 473/473 (100.00%), Query Frame = 1
Query: 1 MNSGAKSLGPMHYGIKSTRPSKVEDNFSSCTSLPTGKASPFGILMENLDVLEETFTESGM 60
MNSGAKSLGPMHYGIKSTRPSKVEDNFSSCTSLPTGKASPFGILMENLDVLEETFTESGM
Sbjct: 88 MNSGAKSLGPMHYGIKSTRPSKVEDNFSSCTSLPTGKASPFGILMENLDVLEETFTESGM 147
Query: 61 LSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDSSGLPIEGGEDHNVNQKTNDQNDNV 120
LSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDSSGLPIEGGEDHNVNQKTNDQNDNV
Sbjct: 148 LSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDSSGLPIEGGEDHNVNQKTNDQNDNV 207
Query: 121 TVYSAKKAGRRSVKKRAMDNADKIASRLLTTRAVKEKIHRSTVFSRKKSSNSSKRRLIVA 180
TVYSAKKAGRRSVKKRAMDNADKIASRLLTTRAVKEKIHRSTVFSRKKSSNSSKRRLIVA
Sbjct: 208 TVYSAKKAGRRSVKKRAMDNADKIASRLLTTRAVKEKIHRSTVFSRKKSSNSSKRRLIVA 267
Query: 181 INEAEMSTGVKVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGSFCRDE 240
INEAEMSTGVKVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGSFCRDE
Sbjct: 268 INEAEMSTGVKVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGSFCRDE 327
Query: 241 LLRSTNSLVVFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRISTYIQYWIRKS 300
LLRSTNSLVVFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRISTYIQYWIRKS
Sbjct: 328 LLRSTNSLVVFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRISTYIQYWIRKS 387
Query: 301 MSRVVARNSRGIQIPRSLTKAINQIQKARKVLNHSGRRYSDDDIARATGLPLAKVRVASN 360
MSRVVARNSRGIQIPRSLTKAINQIQKARKVLNHSGRRYSDDDIARATGLPLAKVRVASN
Sbjct: 388 MSRVVARNSRGIQIPRSLTKAINQIQKARKVLNHSGRRYSDDDIARATGLPLAKVRVASN 447
Query: 361 CLKVVGSNDQKMGDGVNMKYMEFTADMSIQSPEETVKRKLMKKDIFNILQRLESRERQVL 420
CLKVVGSNDQKMGDGVNMKYMEFTADMSIQSPEETVKRKLMKKDIFNILQRLESRERQVL
Sbjct: 448 CLKVVGSNDQKMGDGVNMKYMEFTADMSIQSPEETVKRKLMKKDIFNILQRLESRERQVL 507
Query: 421 VLRYGLVDFEPKSLEEIGKLLHISKEWVRKIEKKAMTKLKNEETVKHLSHYLD 474
VLRYGLVDFEPKSLEEIGKLLHISKEWVRKIEKKAMTKLKNEETVKHLSHYLD
Sbjct: 508 VLRYGLVDFEPKSLEEIGKLLHISKEWVRKIEKKAMTKLKNEETVKHLSHYLD 560
BLAST of Cucsa.160980 vs. NCBI nr
Match:
gi|659088439|ref|XP_008444981.1| (PREDICTED: RNA polymerase sigma factor sigC [Cucumis melo])
HSP 1 Score: 851.3 bits (2198), Expect = 8.2e-244
Identity = 437/473 (92.39%), Postives = 452/473 (95.56%), Query Frame = 1
Query: 1 MNSGAKSLGPMHYGIKSTRPSKVEDNFSSCTSLPTGKASPFGILMENLDVLEETFTESGM 60
MNSGAKSL +HYGIKSTRPSKVEDNFSS TS+PTGKASPFGILMENLDVLEETF ESGM
Sbjct: 88 MNSGAKSLSSLHYGIKSTRPSKVEDNFSSPTSMPTGKASPFGILMENLDVLEETFAESGM 147
Query: 61 LSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDSSGLPIEGGEDHNVNQKTNDQNDNV 120
LSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHD S LP+E GEDHNVNQKTNDQN +V
Sbjct: 148 LSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPVEDGEDHNVNQKTNDQNCDV 207
Query: 121 TVYSAKKAGRRSVKKRAMDNADKIASRLLTTRAVKEKIHRSTVFSRKKSSNSSKRRLIVA 180
TVYS K+AGRRSVKKRAMDNADK+ASR L TRAVKEKIH ST+FSRKKSSNSSKRRL+VA
Sbjct: 208 TVYSGKRAGRRSVKKRAMDNADKVASRPLATRAVKEKIHSSTIFSRKKSSNSSKRRLVVA 267
Query: 181 INEAEMSTGVKVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGSFCRDE 240
NEAEMSTG+KVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFG FCRDE
Sbjct: 268 RNEAEMSTGIKVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRDE 327
Query: 241 LLRSTNSLVVFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRISTYIQYWIRKS 300
LLRSTNSLV+FLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFR STYIQYWIRKS
Sbjct: 328 LLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKS 387
Query: 301 MSRVVARNSRGIQIPRSLTKAINQIQKARKVLNHSGRRYSDDDIARATGLPLAKVRVASN 360
MSRVVARNSRGIQIP SLTKAINQIQKARKVLN GRRYSDDDIARATGLPLAKVRVASN
Sbjct: 388 MSRVVARNSRGIQIPWSLTKAINQIQKARKVLNQGGRRYSDDDIARATGLPLAKVRVASN 447
Query: 361 CLKVVGSNDQKMGDGVNMKYMEFTADMSIQSPEETVKRKLMKKDIFNILQRLESRERQVL 420
CLKVVGS DQKMGDG+NMKYMEFTAD SIQSPEETVKRKLMKKDIFNILQ LESRERQVL
Sbjct: 448 CLKVVGSVDQKMGDGLNMKYMEFTADTSIQSPEETVKRKLMKKDIFNILQGLESRERQVL 507
Query: 421 VLRYGLVDFEPKSLEEIGKLLHISKEWVRKIEKKAMTKLKNEETVKHLSHYLD 474
VLRYGL+DF+PKSLEEIGKLLH+SKEWVRKIEKKAMTKLKNEETVK+LSHYLD
Sbjct: 508 VLRYGLMDFQPKSLEEIGKLLHVSKEWVRKIEKKAMTKLKNEETVKNLSHYLD 560
BLAST of Cucsa.160980 vs. NCBI nr
Match:
gi|590573790|ref|XP_007012219.1| (RNApolymerase sigma-subunit C, putative [Theobroma cacao])
HSP 1 Score: 506.1 bits (1302), Expect = 6.5e-140
Identity = 261/450 (58.00%), Postives = 346/450 (76.89%), Query Frame = 1
Query: 25 DNFSSCTSLPTGKASPFGILMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCL 84
D SS TS KAS + +LMENLDVLEETF +S +L+LER+I+LQL + GAL+ FNTCL
Sbjct: 399 DKSSSRTSPQACKASHYSLLMENLDVLEETFADSDVLTLEREILLQLGRFGALKLFNTCL 458
Query: 85 SRTLKTSSFHDSSGLPIEGGEDHNVNQKTNDQNDNVTVYSAKKAGRRSVKKRAMDNADKI 144
SRTLK S+ D S +P G D N+N + Q DN+ V S KK R+ +++RA++N I
Sbjct: 459 SRTLKASNILDLSDVPANSG-DCNMNLSVDGQKDNIVVCSRKKKQRKKIRERALENPTII 518
Query: 145 ASRLLTTRAVKEKIHRSTVFSRKKSSNSSKRRLIVAINEAEMSTGVKVVANLERIRETLE 204
+++L+ + + + + V S K+ S+S RRL +A NEAEMS GVKVVANLERIR TLE
Sbjct: 519 STQLMPSNTLHGRFQKPKVSSAKRVSDSRSRRLRIARNEAEMSKGVKVVANLERIRTTLE 578
Query: 205 KESGRIASMSCWAEAASVDIKDLQKQLQFGSFCRDELLRSTNSLVVFLAKKYRCSGLPME 264
+E+GR AS+SCWAEAA V K LQ+ L+FG +CRDELLRST SLV++ A+ YR G+ E
Sbjct: 579 EETGRAASLSCWAEAAGVSEKVLQQHLRFGWYCRDELLRSTRSLVLYFARNYRGLGIAHE 638
Query: 265 DLVQAGALGVLQGVERFDPKRGFRISTYIQYWIRKSMSRVVARNSRGIQIPRSLTKAINQ 324
DL+QAG+LGVLQG ERFD RG+R STY+Q+WIRKS+SR+VAR++RGIQ+P +L++AI Q
Sbjct: 639 DLIQAGSLGVLQGAERFDHTRGYRFSTYVQFWIRKSVSRIVARHARGIQVPCTLSRAIVQ 698
Query: 325 IQKARKVLNHSGRRYSDDD-IARATGLPLAKVRVASNCLKVVGSNDQKMGDGVNMKYMEF 384
IQKARK L+ S +Y D+D IA+ TGL LAK+R A+ C++VVGS DQK+GD +N KY+EF
Sbjct: 699 IQKARKALSKSHGKYPDEDAIAKFTGLSLAKIRSANKCMRVVGSIDQKIGDCMNAKYLEF 758
Query: 385 TADMSIQSPEETVKRKLMKKDIFNILQRLESRERQVLVLRYGLVDFEPKSLEEIGKLLHI 444
D+S++SPE+TV R+ MK+DI ++L L++RERQV+VLRYGL PKSLEEIG+L H+
Sbjct: 759 IPDLSVRSPEKTVMRQHMKEDIHDLLNGLDARERQVMVLRYGLKGSPPKSLEEIGRLFHV 818
Query: 445 SKEWVRKIEKKAMTKLKNEETVKHLSHYLD 474
SKEW+R+IE KAM KL+++ET ++LSHYLD
Sbjct: 819 SKEWIRRIEMKAMKKLRDKETCRNLSHYLD 847
BLAST of Cucsa.160980 vs. NCBI nr
Match:
gi|658058623|ref|XP_008365120.1| (PREDICTED: RNA polymerase sigma factor sigC-like [Malus domestica])
HSP 1 Score: 485.7 bits (1249), Expect = 9.1e-134
Identity = 253/451 (56.10%), Postives = 341/451 (75.61%), Query Frame = 1
Query: 24 EDNFSSCTSLPTGKASPFGILMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTC 83
+ +F S L A+ F +L++NLD LEETF S +L LE +I+ QL +LGAL+ FN
Sbjct: 109 DGDFRSSKGLEACSAAHFSLLLKNLDALEETFANSDVLKLENEILSQLGRLGALQLFNAY 168
Query: 84 LSRTLKTSSFHDSSGLPIEGGEDHNVNQKTNDQNDNVTVYSAKKAGRRSVKKRAMDNADK 143
LSRTL +SSF D S +P E++ +++K ++ V+S KK RRS +KRA DNA +
Sbjct: 169 LSRTLTSSSFXDLSDIPTVPIEEYKMDKKVDNDRGKTIVWSGKKEERRS-RKRASDNA-R 228
Query: 144 IASRLLTTRAVKEKIHRSTVFSRKKSSNSSKRRLIVAINEAEMSTGVKVVANLERIRETL 203
++S LL+ + E TV S K++S S +RR + +NEAE+STGVKV+A LER++ TL
Sbjct: 229 VSSELLSPKTTWEGFKPPTVSSAKRASXSRRRRXTIVLNEAELSTGVKVIAKLERVKATL 288
Query: 204 EKESGRIASMSCWAEAASVDIKDLQKQLQFGSFCRDELLRSTNSLVVFLAKKYRCSGLPM 263
EKE+G +A++SCWAEAA V K L ++L FG +C+DEL+RST SLV++LA+ YR G+ M
Sbjct: 289 EKETGTVATLSCWAEAAGVHKKVLLQKLHFGWYCQDELIRSTRSLVLYLARSYRGLGVAM 348
Query: 264 EDLVQAGALGVLQGVERFDPKRGFRISTYIQYWIRKSMSRVVARNSRGIQIPRSLTKAIN 323
+DL+QAG LG+LQG ER+DP RG+R STY++YWI+KSMSR+VAR++RGIQIP +L+KAIN
Sbjct: 349 DDLLQAGNLGLLQGAERYDPSRGYRFSTYVRYWIKKSMSRLVARHARGIQIPFTLSKAIN 408
Query: 324 QIQKARKVLNHSGRRYSDDD-IARATGLPLAKVRVASNCLKVVGSNDQKMGDGVNMKYME 383
QIQKARK +S +Y DDD IA+ TGL LA+++ AS CL+VVGS D+KM D +ME
Sbjct: 409 QIQKARKATYNSQMKYPDDDEIAKITGLSLARIKSASTCLRVVGSIDEKMWDSSAGTFME 468
Query: 384 FTADMSIQSPEETVKRKLMKKDIFNILQRLESRERQVLVLRYGLVDFEPKSLEEIGKLLH 443
FTAD SI+SPEETV R+ MKKDI ++L+ L S+ERQVLVLRYGL +++PKSLEEIGKL
Sbjct: 469 FTADKSIKSPEETVTRQHMKKDIHDLLKCLNSKERQVLVLRYGLNNYDPKSLEEIGKLFD 528
Query: 444 ISKEWVRKIEKKAMTKLKNEETVKHLSHYLD 474
+SKEW+RKIEKKA+TKL+++ET + LSHYL+
Sbjct: 529 VSKEWIRKIEKKALTKLRDDETHRSLSHYLN 557
BLAST of Cucsa.160980 vs. NCBI nr
Match:
gi|643724937|gb|KDP34138.1| (hypothetical protein JCGZ_07709 [Jatropha curcas])
HSP 1 Score: 481.5 bits (1238), Expect = 1.7e-132
Identity = 258/474 (54.43%), Postives = 352/474 (74.26%), Query Frame = 1
Query: 4 GAKSLGPMHYGIKSTRPSKVEDNFSSCTSLPTGKASPFGILMENLDVLEETFTESGMLSL 63
G +SL ++ I + ED+F +S + S F +L+ENL++LEE+F +S +L L
Sbjct: 92 GKRSLSGLNDTIDDAQVFIKEDDFVPPSS-SKDRTSNFSLLLENLNILEESFADSDVLKL 151
Query: 64 ERDIVLQLTKLGALEFFNTCLSRTLK--TSSFHDSSGLPIEGGEDHNVNQKTNDQNDNVT 123
ERDI+LQL KLGAL+ FNTCL+RTL+ T++ D S LP E ++ + +N +
Sbjct: 152 ERDILLQLGKLGALKLFNTCLTRTLEVQTANVLDFSDLPTENIQECKRDGTSNGNVYKII 211
Query: 124 VYSAKKAGRRSVKKRA-MDNADKIASRLLTTRAVKEKIHRSTVFSRKKSSNSSKRRLIVA 183
V + KK R+S ++RA + N K+ L ++++ ++T F KK+SNS RRL++A
Sbjct: 212 VCTGKKEERKSRRERASLKNGHKVPCFPLPLKSIQNGRGKATSFD-KKTSNSKSRRLMIA 271
Query: 184 INEAEMSTGVKVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGSFCRDE 243
NEAEMS GVKV+ANLE+IR TLE+E+GR S+SCWAEAA +D+K LQ+QL FG +CRDE
Sbjct: 272 RNEAEMSRGVKVLANLEKIRTTLEQETGRAVSLSCWAEAAGLDMKVLQQQLHFGWYCRDE 331
Query: 244 LLRSTNSLVVFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRISTYIQYWIRKS 303
L+RST SLV+FLA+ YR G+ +EDL+QAG +GVLQG ERFD RG+R STY+QYWIRKS
Sbjct: 332 LVRSTRSLVLFLARNYRGMGIALEDLLQAGNMGVLQGAERFDDARGYRFSTYVQYWIRKS 391
Query: 304 MSRVVARNSRGIQIPRSLTKAINQIQKARKVLNHSGRRYSDD-DIARATGLPLAKVRVAS 363
MS++V+R++RGIQIP +L++AINQIQKARK L+ S +Y DD DIA TGL LAK+ AS
Sbjct: 392 MSKIVSRHARGIQIPCTLSRAINQIQKARKNLSASHGKYPDDEDIAEFTGLSLAKIESAS 451
Query: 364 NCLKVVGSNDQKMGDGVNMKYMEFTADMSIQSPEETVKRKLMKKDIFNILQRLESRERQV 423
CL+VVGS DQKMGD N KY+EF D +I+SPEE V R+ M KD+ ++L+ L++RERQV
Sbjct: 452 RCLRVVGSIDQKMGDCFNAKYLEFIHDTTIKSPEEAVMRQHMIKDMHDLLRGLDTRERQV 511
Query: 424 LVLRYGLVDFEPKSLEEIGKLLHISKEWVRKIEKKAMTKLKNEETVKHLSHYLD 474
L+LRYGL D +PKSLEEIG++ H+SKEWVR++EKK MT+L+NEET ++L +Y++
Sbjct: 512 LILRYGLKDHQPKSLEEIGRVFHVSKEWVRRLEKKVMTRLRNEETCRNLRYYVN 563
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| SIGC_ARATH | 3.0e-105 | 47.75 | RNA polymerase sigma factor sigC OS=Arabidopsis thaliana GN=SIGC PE=2 SV=1 | [more] |
| SIGB_ARATH | 1.9e-54 | 30.58 | RNA polymerase sigma factor sigB OS=Arabidopsis thaliana GN=SIGB PE=2 SV=2 | [more] |
| SIGA_NOSS1 | 9.3e-46 | 32.61 | RNA polymerase sigma factor SigA OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=... | [more] |
| SIGA1_SYNE7 | 2.1e-45 | 31.56 | RNA polymerase sigma factor SigA1 OS=Synechococcus elongatus (strain PCC 7942) G... | [more] |
| SIGF_ARATH | 5.3e-41 | 30.67 | RNA polymerase sigma factor sigF, chloroplastic OS=Arabidopsis thaliana GN=SIGF ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LLW1_CUCSA | 7.7e-265 | 100.00 | Uncharacterized protein OS=Cucumis sativus GN=Csa_2G372830 PE=4 SV=1 | [more] |
| A0A061GKA9_THECC | 4.5e-140 | 58.00 | RNApolymerase sigma-subunit C, putative OS=Theobroma cacao GN=TCM_037242 PE=4 SV... | [more] |
| A0A067KGK9_JATCU | 1.2e-132 | 54.43 | Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07709 PE=4 SV=1 | [more] |
| M5XDD1_PRUPE | 3.5e-132 | 56.10 | Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003696mg PE=4 SV=1 | [more] |
| B9RRX0_RICCO | 1.1e-130 | 52.51 | RNA polymerase sigma factor rpoD, putative OS=Ricinus communis GN=RCOM_0798990 P... | [more] |
