Carg22479 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22479
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	RNA polymerase sigma factor sigC
Location	Cucurbita_argyrosperma_scaffold_156 : 56490 .. 60012 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAAGAATCCAGCTAAAGATATAGTTTCAGGAGTATATTTGCATCATGTCAGATGGATCTTATATGTTATTACCATTCTCATCACTCTTATATCTCAGATAAACAATAAGGCAAGGCCACAAGGTCATTTGCATTATGGGTTAAAATGCACCAGGCCGTCCAGAGTAGACGACAATTTTTCTGCTGGTACGAGCTTGCCTACTGGCAAAGTGTCGTCTTTTGGCATGTTGATGAAAAACATTGATGTTTTGGAGGAAACTTTTGCTGAATCAGGCATGCTAAGCTTGGGAAGAGATGGCCAAAATGACTTAGCCATTGAGGACGGTGGATATCATAACGTAAACCCAAAAACAGATGGCCAAAATGATGACGTCGTAGTTTACTCTGGTAAAAGAGCAGGAAGAAGATCAGTAAAAGAGAGAGCAGTGGATAATGCTGATAAAGTAGCTTCCCAGCTGCTAACTACACGAGCGGGTAAAGAAAAATTTCGTAATTCCTCGATATTTTCAAGAAAAAGAGCGTTTAAAAGACCAAACGTTGCACGAAATGAAGTTGAAATATCCACAGGGGTTAAGGTTGATTCATCTCTGATATGCTCACAATCATCTTTTCAATACTTATTATGCTAAGCTTCTGTCTCATTGCAGGTAGTTGCAAATTTAGAAAGAATTAGAGAAACTTTAGAGAAGGAAACTGGAAAAATATCAAGCATGAGTTGCTGGGCCAATGCTGCTGGTGTTGATAAAAAGGACCTCCAAAAACAGCTGCAATTTGGTTGGTTCTGTCAAGATGAACTCTTAAGGACTACTAATTCATTAGTTCGGTTCCTTTCGAAGAAGTATCAATGCTCTGGACTACCAATGGAGGACTTAGTTCAGGTCGATTCATTTCCGTTTTATGAGAAAATGGAGAGGATATGCATCTTGATGTTTATGTTCTTGTATTTTCATAGGCAGGAGCTGTTGGTGTTCTGCAAGGTGTGGAAAGGTTTGACCCGAAAAGGGGTTTTACATTGTCAACCTATATCCATTACTGGATAAGGAAATTGATGTCGAGCGTTGTTGCACGAAATTCAAGGGGAATTCAAATTCCAGTATGATTCTGTTTTCACCAGGAGGTGATTTTTCGTAAAGTTTTCATATTCATGTATAACTGACTGTCTTTATAATTCTTTGTAGTGGTCATTGACCAAGGCAATGAATCAGATTCAGAAAGCTCGAAAGGTCTTGAACAACGGTAGTAGTCGATATTCTGATGACGATATAGCGAAGGCCACTGGTCTTCCTTTGGCTAAGGTTAGACTTGTTAACAATTGCTTAAGAGTTGTGGGTTCGATTGATCAGAAGAGGAGTGATGGCCTAAACGTGAAATATATGGTATGATTCTCTCTTCCATACAAGGTTATTGTGAGATCCCATATCGGCTGGGGAGGAGAACGAAACATCTTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGTGTTTTACTTGAGGGGAAGCCCGAATGAGAAAGCCCAAAGAGGACGACATCTGCTAGTGGTTGGTTTGGGTTGTTACAAATAGTATTAGAGGCAGACACTGGGCAGCGTGTCAGTGAGGAAGGTGAGTCTCGAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAAACACCTTTTATAAGGGTGTGAAAACTTCTCTCTAGTAGACGCATTTTAAAACCTTGAGGGGAAGCTGGAAAGGGAAAGTCCAAAGAATACAATATCTACTAACGGCGGGCGGACTTGGGCTGTTACACTTTTAGATTAATGTTACAAATTACAATATATATGAAAACTCTGATCTGATATTTTATGTTCTTTAAGAGTTGCTCTTATGGTGCAGAAATTTGCAGCAGATACTTCAATACAAAGCCCAGAAGAGACCGTGAAGCGAAAACTCATGAAGATCGACATCTTTAATCTTCTTGTAAGGGTTGGAATCAAGGGAGAGGCAGGTCCTGGCTATGCGATACGGACTTGTCGATTTCCGACCCAAGTCACTTGAGGAAACTGGGAAACTTCTGCAGATAAGCAAGGAGTGGGTTCGAAAAATAGAAAAGAAAGCCATTACAAAGCTGAAAAATGAAGAGACTGTGAGGAACTTGAGCCATTATTTGGCTTGATATACTTCTTTCAGCCAATCTTTTCAGAACTTGCAGCAGGCCAAGGAAGCCAAGGTTCATACTAAGAAAGCTACTGTCACAAGAAATCACGACGAATTGTTCATATCTCAATCATCGACGTTTCGAGCAAAGAATTCTGTACAGTTCCATACGCAGACACACCAACCCACTGCTTCCAGGTTCGTGTTTTCTAACTTAAAATATGTCCTTTATTTCCATCATGCACTGCTGAGGCAGTAGATAAAGATGTTGACCTGGGCATGGGCAAACCTTCTACATAGCTACATATATAGCAATTTTAAGCCATATGGCTCCAAATATATTGCATTGTATTACATGTACAGAGCGATTCATTCCATTGTTTTAGAGCTGTATGTCTGGTTGAGCTCAGCTGATTTATCAGTACTAAGTGTCTATTAGCTTTTGTGTTGGCATGTGAATTCAGACCAAGTTCTTCGTGACTTTGCTGATAAGAAATTTGAGATTATATAATGTGAGATCCCACGTCGGATGGAGAGGGGAATGAAACATTCCTTTAAAGGTGTGGAAACCTCTCCCTAGCAGATATGTTTTAAAACCGTGAGGTTGACGGCGATACGTATGGGCTAAAGCGAACAATATTTGCTAGTGGTGGACTTGAGTTGTTACAAATGGTATCAGAGTCAGACACCAAATGGTGTGTCAGTGAGGACGCTGACCTCCAACAGGATGGATTGTGAGATCTCACATCAGTTGGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTTTCTCTAGCAAACACATTTTAAAATCTTTAGGAGAAGCTCAAAAGGAAGTACTCAAAGAGGACAATATCGGCTAGTGGTGGGCATGGACGGTTACATATATGCTGTAAGATCCTTCTTACAAGGGTGTAGAAACTTCTTCCTAGAGCATTTTAAATCCTTAAGGGGAAGCCGGAAAGAGAAACTCAAAGAGAACAATATCTACTAGCAGTGTTGTTAGATATATAATACCTTTCTTCCTCGGGAAGAAATGTACGAATGAAACGGTGAATAGTTTGTTTTGTTTGACAACTTTGGTAGAAGCATCAAGCAGGTCAGGTCAGAAATAAATGCTATAATTTATTATTATCAATTGGTTTTCTTGATGAAGGGAAAGCTGACAACAATTGAATCAATGGACGAGTTAACTTACTTTTCTTTTCTTTTTTTTTCTTTCTATGTAATATTTATTATAAAATTCTTTTAAAAAATTTATGACGATAGCGAGAGGTCTATTGCATTTATTACATCATCGATTGTCAAATCAACGGTCTAAATTTTTCGGTATTTGAGTATAGTTTCAGTTTGGATCTAATGAATTATCCAGGTTGA

mRNA sequence

ATGGATAAGAATCCAGCTAAAGATATAGTTTCAGGAGTATATTTGCATCATGTCAGATGGATCTTATATGTTATTACCATTCTCATCACTCTTATATCTCAGATAAACAATAAGGCAAGGCCACAAGGTCATTTGCATTATGGGTTAAAATGCACCAGGCCGTCCAGAGTAGACGACAATTTTTCTGCTGGTACGAGCTTGCCTACTGGCAAAGTGTCGTCTTTTGGCATGTTGATGAAAAACATTGATGTTTTGGAGGAAACTTTTGCTGAATCAGGCATGCTAAGCTTGGGAAGAGATGGCCAAAATGACTTAGCCATTGAGGACGGTGGATATCATAACGTAAACCCAAAAACAGATGGCCAAAATGATGACGTCGTAGTTTACTCTGGTAAAAGAGCAGGAAGAAGATCAGTAAAAGAGAGAGCAGTGGATAATGCTGATAAAGTAGCTTCCCAGCTGCTAACTACACGAGCGGGTAAAGAAAAATTTCGTAATTCCTCGATATTTTCAAGAAAAAGAGCGTTTAAAAGACCAAACGTTGCACGAAATGAAGTTGAAATATCCACAGGGGTTAAGGTAGTTGCAAATTTAGAAAGAATTAGAGAAACTTTAGAGAAGGAAACTGGAAAAATATCAAGCATGAGTTGCTGGGCCAATGCTGCTGGTGTTGATAAAAAGGACCTCCAAAAACAGCTGCAATTTGGTTGGTTCTGTCAAGATGAACTCTTAAGGACTACTAATTCATTAGTTCGGTTCCTTTCGAAGAAGTATCAATGCTCTGGACTACCAATGGAGGACTTAGTTCAGGCAGGAGCTGTTGGTGTTCTGCAAGGTGTGGAAAGGTTTGACCCGAAAAGGGGTTTTACATTGTCAACCTATATCCATTACTGGATAAGGAAATTGATGTCGAGCGTTGTTGCACGAAATTCAAGGGGAATTCAAATTCCATGGTCATTGACCAAGGCAATGAATCAGATTCAGAAAGCTCGAAAGGTCTTGAACAACGGTAGTAGTCGATATTCTGATGACGATATAGCGAAGGCCACTGGTCTTCCTTTGGCTAAGGTCCTGGCTATGCGATACGGACTTGTCGATTTCCGACCCAAGTCACTTGAGGAAACTGGGAAACTTCTGCAGATAAGCAAGGAGTGGGTTCGAAAAATAGAAAAGAAAGCCATTACAAAGCTGAAAAATGAAGAGACTAACTTGCAGCAGGCCAAGGAAGCCAAGGTTCATACTAAGAAAGCTACTGTCACAAGAAATCACGACGAATTGTTCATATCTCAATCATCGACGTTTCGAGCAAAGAATTCTGTACAGTTCCATACGCAGACACACCAACCCACTGCTTCCAGTTTGGATCTAATGAATTATCCAGGTTGA

Coding sequence (CDS)

ATGGATAAGAATCCAGCTAAAGATATAGTTTCAGGAGTATATTTGCATCATGTCAGATGGATCTTATATGTTATTACCATTCTCATCACTCTTATATCTCAGATAAACAATAAGGCAAGGCCACAAGGTCATTTGCATTATGGGTTAAAATGCACCAGGCCGTCCAGAGTAGACGACAATTTTTCTGCTGGTACGAGCTTGCCTACTGGCAAAGTGTCGTCTTTTGGCATGTTGATGAAAAACATTGATGTTTTGGAGGAAACTTTTGCTGAATCAGGCATGCTAAGCTTGGGAAGAGATGGCCAAAATGACTTAGCCATTGAGGACGGTGGATATCATAACGTAAACCCAAAAACAGATGGCCAAAATGATGACGTCGTAGTTTACTCTGGTAAAAGAGCAGGAAGAAGATCAGTAAAAGAGAGAGCAGTGGATAATGCTGATAAAGTAGCTTCCCAGCTGCTAACTACACGAGCGGGTAAAGAAAAATTTCGTAATTCCTCGATATTTTCAAGAAAAAGAGCGTTTAAAAGACCAAACGTTGCACGAAATGAAGTTGAAATATCCACAGGGGTTAAGGTAGTTGCAAATTTAGAAAGAATTAGAGAAACTTTAGAGAAGGAAACTGGAAAAATATCAAGCATGAGTTGCTGGGCCAATGCTGCTGGTGTTGATAAAAAGGACCTCCAAAAACAGCTGCAATTTGGTTGGTTCTGTCAAGATGAACTCTTAAGGACTACTAATTCATTAGTTCGGTTCCTTTCGAAGAAGTATCAATGCTCTGGACTACCAATGGAGGACTTAGTTCAGGCAGGAGCTGTTGGTGTTCTGCAAGGTGTGGAAAGGTTTGACCCGAAAAGGGGTTTTACATTGTCAACCTATATCCATTACTGGATAAGGAAATTGATGTCGAGCGTTGTTGCACGAAATTCAAGGGGAATTCAAATTCCATGGTCATTGACCAAGGCAATGAATCAGATTCAGAAAGCTCGAAAGGTCTTGAACAACGGTAGTAGTCGATATTCTGATGACGATATAGCGAAGGCCACTGGTCTTCCTTTGGCTAAGGTCCTGGCTATGCGATACGGACTTGTCGATTTCCGACCCAAGTCACTTGAGGAAACTGGGAAACTTCTGCAGATAAGCAAGGAGTGGGTTCGAAAAATAGAAAAGAAAGCCATTACAAAGCTGAAAAATGAAGAGACTAACTTGCAGCAGGCCAAGGAAGCCAAGGTTCATACTAAGAAAGCTACTGTCACAAGAAATCACGACGAATTGTTCATATCTCAATCATCGACGTTTCGAGCAAAGAATTCTGTACAGTTCCATACGCAGACACACCAACCCACTGCTTCCAGTTTGGATCTAATGAATTATCCAGGTTGA

Protein sequence

MDKNPAKDIVSGVYLHHVRWILYVITILITLISQINNKARPQGHLHYGLKCTRPSRVDDNFSAGTSLPTGKVSSFGMLMKNIDVLEETFAESGMLSLGRDGQNDLAIEDGGYHNVNPKTDGQNDDVVVYSGKRAGRRSVKERAVDNADKVASQLLTTRAGKEKFRNSSIFSRKRAFKRPNVARNEVEISTGVKVVANLERIRETLEKETGKISSMSCWANAAGVDKKDLQKQLQFGWFCQDELLRTTNSLVRFLSKKYQCSGLPMEDLVQAGAVGVLQGVERFDPKRGFTLSTYIHYWIRKLMSSVVARNSRGIQIPWSLTKAMNQIQKARKVLNNGSSRYSDDDIAKATGLPLAKVLAMRYGLVDFRPKSLEETGKLLQISKEWVRKIEKKAITKLKNEETNLQQAKEAKVHTKKATVTRNHDELFISQSSTFRAKNSVQFHTQTHQPTASSLDLMNYPG

Homology

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BLAST of Carg22479 vs. NCBI nr
Match: XP_023002340.1 (RNA polymerase sigma factor sigC-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 605.5 bits (1560), Expect = 1.5e-169
Identity = 312/346 (90.17%), Postives = 319/346 (92.20%), Query Frame = 0


Query: 32  ISQINNKARPQGHLHYGLKCTRPSRVDDNFSAGTSLPTGKVSSFGMLMKNIDVLEETFAE 91
           + +INNKARP GHLHYGLK TRPSRVD+NFSAGTSLPTGK SSFGMLMKNIDVLEETFAE
Sbjct: 84  VIEINNKARPPGHLHYGLKGTRPSRVDNNFSAGTSLPTGKASSFGMLMKNIDVLEETFAE 143

Query: 92  SGMLSLGRDGQNDLAIEDGGYHNVNPKTDGQNDDVVVYSGKRAGRRSVKERAVDNADKVA 151
           SGMLS+GRDGQNDLAIEDGGYHNVNPKTDGQNDDVVVYSGKRAGRRSVKERAVDNADKVA
Sbjct: 144 SGMLSMGRDGQNDLAIEDGGYHNVNPKTDGQNDDVVVYSGKRAGRRSVKERAVDNADKVA 203

Query: 152 SQLLTTRAGKEKFRNSSIFSRKRAFKRPNVARNEVEISTGVKVVANLERIRETLEKETGK 211
           SQLLTTRA KEKFRNSSIFSRKRAFKR  VA+NEVEISTGVKVVANLERIRETLEK TGK
Sbjct: 204 SQLLTTRAAKEKFRNSSIFSRKRAFKRLTVAQNEVEISTGVKVVANLERIRETLEKATGK 263

Query: 212 ISSMSCWANAAGVDKKDLQKQLQFGWFCQDELLRTTNSLVRFLSKKYQCSGLPMEDLVQA 271
           ISSMSCWANAAGVD KDLQ QLQFGWFCQDELLRTTNSLVRFLSKKY+CSGLPMEDLVQA
Sbjct: 264 ISSMSCWANAAGVDIKDLQNQLQFGWFCQDELLRTTNSLVRFLSKKYRCSGLPMEDLVQA 323

Query: 272 GAVGVLQGVERFDPKRGFTLSTYIHYWIRKLMSSVVARNSRGIQIPWSLTKAMNQIQKAR 331
           GAVGVLQGVERFDPKRGF  STYIHYWIRK MSSVVARNSR IQIPWSLTKAMNQIQKAR
Sbjct: 324 GAVGVLQGVERFDPKRGFRFSTYIHYWIRKSMSSVVARNSREIQIPWSLTKAMNQIQKAR 383

Query: 332 KVLNNGSSRYSDDDIAKATGLPLAKVLAMRYGLVDFRPKSLEETGK 378
           KVLNNGSSRYSDDDIAKATGLPLAK  A      D   +S EET K
Sbjct: 384 KVLNNGSSRYSDDDIAKATGLPLAKEFA-----ADTSIQSPEETVK 424

[Close]

BLAST of Carg22479 vs. NCBI nr
Match: XP_023002341.1 (RNA polymerase sigma factor sigC-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 605.5 bits (1560), Expect = 1.5e-169
Identity = 306/327 (93.58%), Postives = 313/327 (95.72%), Query Frame = 0


Query: 32  ISQINNKARPQGHLHYGLKCTRPSRVDDNFSAGTSLPTGKVSSFGMLMKNIDVLEETFAE 91
           + +INNKARP GHLHYGLK TRPSRVD+NFSAGTSLPTGK SSFGMLMKNIDVLEETFAE
Sbjct: 84  VIEINNKARPPGHLHYGLKGTRPSRVDNNFSAGTSLPTGKASSFGMLMKNIDVLEETFAE 143

Query: 92  SGMLSLGRDGQNDLAIEDGGYHNVNPKTDGQNDDVVVYSGKRAGRRSVKERAVDNADKVA 151
           SGMLS+GRDGQNDLAIEDGGYHNVNPKTDGQNDDVVVYSGKRAGRRSVKERAVDNADKVA
Sbjct: 144 SGMLSMGRDGQNDLAIEDGGYHNVNPKTDGQNDDVVVYSGKRAGRRSVKERAVDNADKVA 203

Query: 152 SQLLTTRAGKEKFRNSSIFSRKRAFKRPNVARNEVEISTGVKVVANLERIRETLEKETGK 211
           SQLLTTRA KEKFRNSSIFSRKRAFKR  VA+NEVEISTGVKVVANLERIRETLEK TGK
Sbjct: 204 SQLLTTRAAKEKFRNSSIFSRKRAFKRLTVAQNEVEISTGVKVVANLERIRETLEKATGK 263

Query: 212 ISSMSCWANAAGVDKKDLQKQLQFGWFCQDELLRTTNSLVRFLSKKYQCSGLPMEDLVQA 271
           ISSMSCWANAAGVD KDLQ QLQFGWFCQDELLRTTNSLVRFLSKKY+CSGLPMEDLVQA
Sbjct: 264 ISSMSCWANAAGVDIKDLQNQLQFGWFCQDELLRTTNSLVRFLSKKYRCSGLPMEDLVQA 323

Query: 272 GAVGVLQGVERFDPKRGFTLSTYIHYWIRKLMSSVVARNSRGIQIPWSLTKAMNQIQKAR 331
           GAVGVLQGVERFDPKRGF  STYIHYWIRK MSSVVARNSR IQIPWSLTKAMNQIQKAR
Sbjct: 324 GAVGVLQGVERFDPKRGFRFSTYIHYWIRKSMSSVVARNSREIQIPWSLTKAMNQIQKAR 383

Query: 332 KVLNNGSSRYSDDDIAKATGLPLAKVL 359
           KVLNNGSSRYSDDDIAKATGLPLAKV+
Sbjct: 384 KVLNNGSSRYSDDDIAKATGLPLAKVI 410

[Close]

BLAST of Carg22479 vs. NCBI nr
Match: XP_023002339.1 (RNA polymerase sigma factor sigC-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 604.7 bits (1558), Expect = 2.5e-169
Identity = 306/326 (93.87%), Postives = 312/326 (95.71%), Query Frame = 0


Query: 32  ISQINNKARPQGHLHYGLKCTRPSRVDDNFSAGTSLPTGKVSSFGMLMKNIDVLEETFAE 91
           + +INNKARP GHLHYGLK TRPSRVD+NFSAGTSLPTGK SSFGMLMKNIDVLEETFAE
Sbjct: 84  VIEINNKARPPGHLHYGLKGTRPSRVDNNFSAGTSLPTGKASSFGMLMKNIDVLEETFAE 143

Query: 92  SGMLSLGRDGQNDLAIEDGGYHNVNPKTDGQNDDVVVYSGKRAGRRSVKERAVDNADKVA 151
           SGMLS+GRDGQNDLAIEDGGYHNVNPKTDGQNDDVVVYSGKRAGRRSVKERAVDNADKVA
Sbjct: 144 SGMLSMGRDGQNDLAIEDGGYHNVNPKTDGQNDDVVVYSGKRAGRRSVKERAVDNADKVA 203

Query: 152 SQLLTTRAGKEKFRNSSIFSRKRAFKRPNVARNEVEISTGVKVVANLERIRETLEKETGK 211
           SQLLTTRA KEKFRNSSIFSRKRAFKR  VA+NEVEISTGVKVVANLERIRETLEK TGK
Sbjct: 204 SQLLTTRAAKEKFRNSSIFSRKRAFKRLTVAQNEVEISTGVKVVANLERIRETLEKATGK 263

Query: 212 ISSMSCWANAAGVDKKDLQKQLQFGWFCQDELLRTTNSLVRFLSKKYQCSGLPMEDLVQA 271
           ISSMSCWANAAGVD KDLQ QLQFGWFCQDELLRTTNSLVRFLSKKY+CSGLPMEDLVQA
Sbjct: 264 ISSMSCWANAAGVDIKDLQNQLQFGWFCQDELLRTTNSLVRFLSKKYRCSGLPMEDLVQA 323

Query: 272 GAVGVLQGVERFDPKRGFTLSTYIHYWIRKLMSSVVARNSRGIQIPWSLTKAMNQIQKAR 331
           GAVGVLQGVERFDPKRGF  STYIHYWIRK MSSVVARNSR IQIPWSLTKAMNQIQKAR
Sbjct: 324 GAVGVLQGVERFDPKRGFRFSTYIHYWIRKSMSSVVARNSREIQIPWSLTKAMNQIQKAR 383

Query: 332 KVLNNGSSRYSDDDIAKATGLPLAKV 358
           KVLNNGSSRYSDDDIAKATGLPLAKV
Sbjct: 384 KVLNNGSSRYSDDDIAKATGLPLAKV 409

[Close]

BLAST of Carg22479 vs. NCBI nr
Match: XP_023538504.1 (RNA polymerase sigma factor sigC-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 570.1 bits (1468), Expect = 6.9e-159
Identity = 292/324 (90.12%), Postives = 299/324 (92.28%), Query Frame = 0


Query: 34  QINNKARPQGHLHYGLKCTRPSRVDDNFSAGTSLPTGKVSSFGMLMKNIDVLEETFAESG 93
           +INNKARP GHLHYGLKCTRPSRVDDNFSAGTSLPTGK SSFGMLMKNIDVLEETFAESG
Sbjct: 86  EINNKARPLGHLHYGLKCTRPSRVDDNFSAGTSLPTGKASSFGMLMKNIDVLEETFAESG 145

Query: 94  MLSLGRDGQNDLAIEDGGYHNVNPKTDGQNDDVVVYSGKRAGRRSVKERAVDNADKVASQ 153
           MLSLGRDGQNDLAIEDGGYHNV+PKTDGQNDDVVVYSGKRAGRRSVK+RAVDNADKVASQ
Sbjct: 146 MLSLGRDGQNDLAIEDGGYHNVHPKTDGQNDDVVVYSGKRAGRRSVKKRAVDNADKVASQ 205

Query: 154 LLTTRAGKEKFRNSSIFSRKRAFKRPNVARNEVEISTGVKVVANLERIRETLEKETGKIS 213
            LTTRA KEKFRNSSIFSRKRAFKRP VARNEVEISTGVKVVANLERIRETLEKETGKIS
Sbjct: 206 PLTTRAAKEKFRNSSIFSRKRAFKRPTVARNEVEISTGVKVVANLERIRETLEKETGKIS 265

Query: 214 SMSCWANAAGVDKKDLQKQLQFGWFCQDELLRTTNSLVRFLSKKYQCSGLPMEDLVQAGA 273
           SMSCWANAAGVD KDLQKQLQFGWFCQDELLRTTNSLVRFLSKKY+CSGLPMEDLVQAGA
Sbjct: 266 SMSCWANAAGVDIKDLQKQLQFGWFCQDELLRTTNSLVRFLSKKYRCSGLPMEDLVQAGA 325

Query: 274 VGVLQGVERFDPKRGFTLSTYIHYWIRKLMSSVVARNSRGIQIPWSLTKAMNQIQKARKV 333
           VGVLQGVERFDPKRGF  STYIHYWIRK MSSVVARNSR +    +        +  RK 
Sbjct: 326 VGVLQGVERFDPKRGFRFSTYIHYWIRKSMSSVVARNSRVVIDQGN--------ESDRKA 385

Query: 334 LNNGSSRYSDDDIAKATGLPLAKV 358
           LNNGSSRYSDDDIAKATGLPLAKV
Sbjct: 386 LNNGSSRYSDDDIAKATGLPLAKV 401

[Close]

BLAST of Carg22479 vs. NCBI nr
Match: XP_023538506.1 (RNA polymerase sigma factor sigC-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 568.5 bits (1464), Expect = 2.0e-158
Identity = 291/323 (90.09%), Postives = 298/323 (92.26%), Query Frame = 0


Query: 34  QINNKARPQGHLHYGLKCTRPSRVDDNFSAGTSLPTGKVSSFGMLMKNIDVLEETFAESG 93
           +INNKARP GHLHYGLKCTRPSRVDDNFSAGTSLPTGK SSFGMLMKNIDVLEETFAESG
Sbjct: 86  EINNKARPLGHLHYGLKCTRPSRVDDNFSAGTSLPTGKASSFGMLMKNIDVLEETFAESG 145

Query: 94  MLSLGRDGQNDLAIEDGGYHNVNPKTDGQNDDVVVYSGKRAGRRSVKERAVDNADKVASQ 153
           MLSLGRDGQNDLAIEDGGYHNV+PKTDGQNDDVVVYSGKRAGRRSVK+RAVDNADKVASQ
Sbjct: 146 MLSLGRDGQNDLAIEDGGYHNVHPKTDGQNDDVVVYSGKRAGRRSVKKRAVDNADKVASQ 205

Query: 154 LLTTRAGKEKFRNSSIFSRKRAFKRPNVARNEVEISTGVKVVANLERIRETLEKETGKIS 213
            LTTRA KEKFRNSSIFSRKRAFKRP VARNEVEISTGVKVVANLERIRETLEKETGKIS
Sbjct: 206 PLTTRAAKEKFRNSSIFSRKRAFKRPTVARNEVEISTGVKVVANLERIRETLEKETGKIS 265

Query: 214 SMSCWANAAGVDKKDLQKQLQFGWFCQDELLRTTNSLVRFLSKKYQCSGLPMEDLVQAGA 273
           SMSCWANAAGVD KDLQKQLQFGWFCQDELLRTTNSLVRFLSKKY+CSGLPMEDLVQAGA
Sbjct: 266 SMSCWANAAGVDIKDLQKQLQFGWFCQDELLRTTNSLVRFLSKKYRCSGLPMEDLVQAGA 325

Query: 274 VGVLQGVERFDPKRGFTLSTYIHYWIRKLMSSVVARNSRGIQIPWSLTKAMNQIQKARKV 333
           VGVLQGVERFDPKRGF  STYIHYWIRK MSSVVARNSR +    +        +  RK 
Sbjct: 326 VGVLQGVERFDPKRGFRFSTYIHYWIRKSMSSVVARNSRVVIDQGN--------ESDRKA 385

Query: 334 LNNGSSRYSDDDIAKATGLPLAK 357
           LNNGSSRYSDDDIAKATGLPLAK
Sbjct: 386 LNNGSSRYSDDDIAKATGLPLAK 400

[Close]

BLAST of Carg22479 vs. TAIR10
Match: AT3G53920.1 (RNApolymerase sigma-subunit C)

HSP 1 Score: 238.0 bits (606), Expect = 1.1e-62
Identity = 155/430 (36.05%), Postives = 230/430 (53.49%), Query Frame = 0


Query: 62  SAGTSLPTGKVSSFGMLMKNIDVLEETFA--------ESGMLSLGRDGQNDLAIEDGGYH 121
           SA  S  +  +  + +L KN+  LEETF            ML +G+ G  +L       +
Sbjct: 135 SAERSYSSRSMLQYNLLAKNLLALEETFVALDSVRMERDIMLQMGKLGAAELFKTCLSRY 194

Query: 122 NVNPKTDGQNDDVVVYSGKR------AGRRSVKERA------VDNADKVASQLLTTRAGK 181
             +  T   +D   +           + RR VK++A       +N D+ +  +     G 
Sbjct: 195 RGSSITSCLSDTTELVDTTPNQQVFVSSRRKVKKKARRSSVTAENGDQSSLPI-----GL 254

Query: 182 EKFRNSSIFSR-----KRAFKRPNVARNEVEISTGVKVVANLERIRETLEKETGKISSMS 241
               N+    R     K   KR  ++RNE E+STGVK+VA++ERIR  LE+E+GK++S+S
Sbjct: 255 RTTWNNIDVPRVRRPPKYRKKRERISRNETEMSTGVKIVADMERIRTQLEEESGKVASLS 314

Query: 242 CWANAAGVDKKDLQKQLQFGWFCQDELLRTTNSLVRFLSKKYQCSGLPMEDLVQAGAVGV 301
           CWA AAG+++K L + L +GW+C+DEL+++T SLV FL++ Y+  G+  EDL+QAG VGV
Sbjct: 315 CWAAAAGMNEKLLMRNLHYGWYCRDELVKSTRSLVLFLARNYRGLGIAHEDLIQAGYVGV 374

Query: 302 LQGVERFDPKRGFTLSTYIHYWIRKLMSSVVARNSRGIQIPWSLTKAMNQIQKARKVL-- 361
           LQG ERFD  RG+  STY+ YWIRK MS++V+R++RG+ IP S+ + +N IQKARK L  
Sbjct: 375 LQGAERFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHIPSSIIRTINHIQKARKTLKT 434

Query: 362 NNGSSRYSDDDIAKATGLPLAK-------------------------------------- 401
           ++G    +D++IAK TG  + K                                      
Sbjct: 435 SHGIKYAADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKVGDCFTTKFLEFTPDTTMESP 494

[Close]

BLAST of Carg22479 vs. TAIR10
Match: AT1G08540.1 (RNApolymerase sigma subunit 2)

HSP 1 Score: 147.1 bits (370), Expect = 2.6e-35
Identity = 85/291 (29.21%), Postives = 159/291 (54.64%), Query Frame = 0


Query: 183 RNEVEISTGVKVVANLERIRETLEKETGKISSMSCWANAAGVDKKDLQKQLQFGWFCQDE 242
           R E E+S G++ +  LER++  L + +G+  + + WA+AAGVD+K L++++  G  C+D+
Sbjct: 276 REEHELSAGIQDLLKLERLQTELTERSGRQPTFAQWASAAGVDQKSLRQRIHHGTLCKDK 335

Query: 243 LLRTTNSLVRFLSKKYQCSGLPMEDLVQAGAVGVLQGVERFDPKRGFTLSTYIHYWIRKL 302
           ++++   LV  ++K YQ +G+ ++DLVQ G  G+++G E+FD  +GF  STY H+WI++ 
Sbjct: 336 MIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQA 395

Query: 303 MSSVVARNSRGIQIPWSLTKAMNQIQKARKVLNNGSSRY-SDDDIAKATGLPLAKVLAM- 362
           +   ++  SR I++P+ + +A  ++++ARK L + + ++  +++IA+ATGL + +++A+ 
Sbjct: 396 VRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGLSMKRLMAVL 455

Query: 363 ------------------------------------------------------------ 407
                                                                       
Sbjct: 456 LSPKPPRSLDQKIGMNQNLKPSEVIADPEAVTSEDILIKEFMRQDLDKVLDSLGTREKQV 515

[Close]

BLAST of Carg22479 vs. TAIR10
Match: AT2G36990.1 (RNApolymerase sigma-subunit F)

HSP 1 Score: 104.4 bits (259), Expect = 1.9e-22
Identity = 77/331 (23.26%), Postives = 153/331 (46.22%), Query Frame = 0


Query: 136 RRSVKERAVDNADKVASQLLTTRAGKEKFRNS---SIFSRKRAFKRPNVARNEVEISTGV 195
           RR+ K   VD+   V  +    +  K+   N     +F      K+   A+ E E+ + +
Sbjct: 201 RRAPKSNDVDDEGYVPQKTSAKKKYKQGADNDDALQLFLWGPETKQLLTAKEEAELISHI 260

Query: 196 KVVANLERIRETLEKETGKISSMSCWANAAGVDKKDLQKQLQFGWFCQDELLRTTNSLVR 255
           + +  LE+++  LE + G   ++  WA A G+    L+  +  G   +++L+     LV 
Sbjct: 261 QHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPVLKSDIHRGRSSREKLITANLRLVV 320

Query: 256 FLSKKYQCSGLPMEDLVQAGAVGVLQGVERFDPKRGFTLSTYIHYWIRKLMSSVVARNSR 315
            ++K+YQ  GL  +DL+Q G++G+++ VE+F P+ G   +TY ++WIR+ +   + +NSR
Sbjct: 321 HIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSIRKSIFQNSR 380

Query: 316 GIQIPWSLTKAMNQIQKARKV-LNNGSSRYSDDDIAKATGL--------------PLA-- 375
            I++P ++   + ++ +ARK  +  G+ R S +++A   G+              PL+  
Sbjct: 381 TIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEELAGHVGVSTEKLDKLLYNTRTPLSMQ 440

Query: 376 ------------------------------------------------KVLAMRYGLVDF 399
                                                           +++ +R+G+   
Sbjct: 441 QPIWSDQDTTFQEITPDSGIETPTMSVGKQLMRNHVRNLLNVLSPKERRIIKLRFGIDGG 500

[Close]

BLAST of Carg22479 vs. TAIR10
Match: AT5G13730.1 (sigma factor 4)

HSP 1 Score: 90.9 bits (224), Expect = 2.2e-18
Identity = 73/280 (26.07%), Postives = 127/280 (45.36%), Query Frame = 0


Query: 185 EVEISTGVKVVANLERIRETLEKETGKISSMSCWANAAGVDKKDLQKQLQFGWFCQDELL 244
           EV++   +K  A LE +  ++E E   +S +   A+  G  K+   + L      ++++ 
Sbjct: 128 EVQLCLYLKEGAKLENLGTSVE-ENEMVSVL--LASGRGKKKRSANEILCRRKEAREKIT 187

Query: 245 RTTNSLVRFLSKKYQCSGLPMEDLVQAGAVGVLQGVERFDPKRGFTLSTYIHYWIRKLMS 304
           R    LV  ++  YQ  GL ++DL+Q G++G+L+G ERFDP RG+ LSTY+++WI++ + 
Sbjct: 188 RCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWWIKQAIL 247

Query: 305 SVVARNSRGIQIPWSLTKAMNQIQKARKVLNNGSSRY-SDDDIAKATGLPL--------- 364
             +A  SR +++P S+ +   ++ +A  VL     R  S ++IA+   L +         
Sbjct: 248 RAIAHKSRLVKLPGSMWELTAKVAEASNVLTRKLRRQPSCEEIAEHLNLNVSAVRLAVER 307

Query: 365 -------------------------------------------------------AKVLA 400
                                                                  ++VL 
Sbjct: 308 SRSPVSLDRVASQNGRMTLQEIVRGPDETRPEEMVKREHMKHEIEQLLGSLTARESRVLG 367

[Close]

BLAST of Carg22479 vs. TAIR10
Match: AT1G64860.1 (sigma factor A)

HSP 1 Score: 88.6 bits (218), Expect = 1.1e-17
Identity = 51/172 (29.65%), Postives = 91/172 (52.91%), Query Frame = 0


Query: 186 VEISTGVKVVANLERIRETLEKETGKISSMSCWANAAGVDKKDLQKQLQFGWFCQDELLR 245
           V +S  +K    L+  +  L+   G   S    A +  + + +LQ  L      +++L  
Sbjct: 206 VRLSKKIKSGLRLDDHKSRLKDRLGCEPSDEQLAVSLKISRAELQAWLMECHLAREKLAM 265

Query: 246 TTNSLVRFLSKKYQCSGLPMEDLVQAGAVGVLQGVERFDPKRGFTLSTYIHYWIRKLMSS 305
           +   LV  ++++Y   G  M DLVQ G +G+L+G+E+FD  +GF +STY+++WIR+ +S 
Sbjct: 266 SNVRLVMSIAQRYDNLGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSR 325

Query: 306 VVARNSRGIQIPWSLTKAMNQIQKARKVLNNGSSRYSDDDIAKATGLPLAKV 358
            +  NSR +++P  L + +  I+ A+  L       S D IA++  +   KV
Sbjct: 326 ALVDNSRTLRLPTHLHERLGLIRNAKLRLQEKGITPSIDRIAESLNMSQKKV 377

[Close]

BLAST of Carg22479 vs. Swiss-Prot
Match: sp|O24621|SIGC_ARATH (RNA polymerase sigma factor sigC OS=Arabidopsis thaliana OX=3702 GN=SIGC PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.0e-61
Identity = 155/430 (36.05%), Postives = 230/430 (53.49%), Query Frame = 0


Query: 62  SAGTSLPTGKVSSFGMLMKNIDVLEETFA--------ESGMLSLGRDGQNDLAIEDGGYH 121
           SA  S  +  +  + +L KN+  LEETF            ML +G+ G  +L       +
Sbjct: 135 SAERSYSSRSMLQYNLLAKNLLALEETFVALDSVRMERDIMLQMGKLGAAELFKTCLSRY 194

Query: 122 NVNPKTDGQNDDVVVYSGKR------AGRRSVKERA------VDNADKVASQLLTTRAGK 181
             +  T   +D   +           + RR VK++A       +N D+ +  +     G 
Sbjct: 195 RGSSITSCLSDTTELVDTTPNQQVFVSSRRKVKKKARRSSVTAENGDQSSLPI-----GL 254

Query: 182 EKFRNSSIFSR-----KRAFKRPNVARNEVEISTGVKVVANLERIRETLEKETGKISSMS 241
               N+    R     K   KR  ++RNE E+STGVK+VA++ERIR  LE+E+GK++S+S
Sbjct: 255 RTTWNNIDVPRVRRPPKYRKKRERISRNETEMSTGVKIVADMERIRTQLEEESGKVASLS 314

Query: 242 CWANAAGVDKKDLQKQLQFGWFCQDELLRTTNSLVRFLSKKYQCSGLPMEDLVQAGAVGV 301
           CWA AAG+++K L + L +GW+C+DEL+++T SLV FL++ Y+  G+  EDL+QAG VGV
Sbjct: 315 CWAAAAGMNEKLLMRNLHYGWYCRDELVKSTRSLVLFLARNYRGLGIAHEDLIQAGYVGV 374

Query: 302 LQGVERFDPKRGFTLSTYIHYWIRKLMSSVVARNSRGIQIPWSLTKAMNQIQKARKVL-- 361
           LQG ERFD  RG+  STY+ YWIRK MS++V+R++RG+ IP S+ + +N IQKARK L  
Sbjct: 375 LQGAERFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHIPSSIIRTINHIQKARKTLKT 434

Query: 362 NNGSSRYSDDDIAKATGLPLAK-------------------------------------- 401
           ++G    +D++IAK TG  + K                                      
Sbjct: 435 SHGIKYAADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKVGDCFTTKFLEFTPDTTMESP 494

[Close]

BLAST of Carg22479 vs. Swiss-Prot
Match: sp|O22056|SIGB_ARATH (RNA polymerase sigma factor sigB OS=Arabidopsis thaliana OX=3702 GN=SIGB PE=2 SV=2)

HSP 1 Score: 147.1 bits (370), Expect = 4.7e-34
Identity = 85/291 (29.21%), Postives = 159/291 (54.64%), Query Frame = 0


Query: 183 RNEVEISTGVKVVANLERIRETLEKETGKISSMSCWANAAGVDKKDLQKQLQFGWFCQDE 242
           R E E+S G++ +  LER++  L + +G+  + + WA+AAGVD+K L++++  G  C+D+
Sbjct: 276 REEHELSAGIQDLLKLERLQTELTERSGRQPTFAQWASAAGVDQKSLRQRIHHGTLCKDK 335

Query: 243 LLRTTNSLVRFLSKKYQCSGLPMEDLVQAGAVGVLQGVERFDPKRGFTLSTYIHYWIRKL 302
           ++++   LV  ++K YQ +G+ ++DLVQ G  G+++G E+FD  +GF  STY H+WI++ 
Sbjct: 336 MIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQA 395

Query: 303 MSSVVARNSRGIQIPWSLTKAMNQIQKARKVLNNGSSRY-SDDDIAKATGLPLAKVLAM- 362
           +   ++  SR I++P+ + +A  ++++ARK L + + ++  +++IA+ATGL + +++A+ 
Sbjct: 396 VRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGLSMKRLMAVL 455

Query: 363 ------------------------------------------------------------ 407
                                                                       
Sbjct: 456 LSPKPPRSLDQKIGMNQNLKPSEVIADPEAVTSEDILIKEFMRQDLDKVLDSLGTREKQV 515

[Close]

BLAST of Carg22479 vs. Swiss-Prot
Match: sp|P38023|SIGA1_SYNE7 (RNA polymerase sigma factor SigA1 OS=Synechococcus elongatus (strain PCC 7942) OX=1140 GN=sigA1 PE=3 SV=2)

HSP 1 Score: 117.5 bits (293), Expect = 4.0e-25
Identity = 77/286 (26.92%), Postives = 141/286 (49.30%), Query Frame = 0


Query: 182 ARNEVEISTGVKVVANLERIRETLEKETGKISSMSCWANAAGVDKKDLQKQLQFGWFCQD 241
           A  E+E++  +  +  LERIR+ L ++  ++ S + WA A      + +++L  G   +D
Sbjct: 106 ADEEIELARQIADLLALERIRDELLEQLDRLPSDAEWAAAVDSPLDEFRRRLFRGRRAKD 165

Query: 242 ELLRTTNSLVRFLSKKYQCSGLPMEDLVQAGAVGVLQGVERFDPKRGFTLSTYIHYWIRK 301
           +++++   LV  ++KKY   GL  +DL+Q G++G+++  E+FD ++G+  STY  +WIR+
Sbjct: 166 KMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQ 225

Query: 302 LMSSVVARNSRGIQIPWSLTKAMNQIQKARKVLNNGSSRYSDDD---------------I 361
            ++  +A  SR I++P  L + +++I+K  K+L+    R   ++               I
Sbjct: 226 AITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFI 285

Query: 362 AKATGLPLA-------------------------------------------------KV 404
           AK+  LP++                                                  V
Sbjct: 286 AKSAQLPISLETPIGKEEDSRLGDFIEADGETPEDEVAKNLLREDLEGVLSTLSPRERDV 345

[Close]

BLAST of Carg22479 vs. Swiss-Prot
Match: sp|P26683|SIGA_NOSS1 (RNA polymerase sigma factor SigA OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=sigA PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 8.9e-25
Identity = 83/321 (25.86%), Postives = 151/321 (47.04%), Query Frame = 0


Query: 149 KVASQLLTTRAGKEKFRNSSIFSRKRAFKRPNVAR--NEVEISTGVKVVANLERIRETLE 208
           K A     T++ K+ +   SI    +   R  + R   E+E++  +  +  LER+RE L 
Sbjct: 62  KAAKSRRRTQSKKKHYTEDSIRLYLQEIGRIRLLRADEEIELARKIADLLELERVRERLS 121

Query: 209 KETGKISSMSCWANAAGVDKKDLQKQLQFGWFCQDELLRTTNSLVRFLSKKYQCSGLPME 268
           ++  +    S WA A  +     + +L  G   +D+++++   LV  ++KKY   GL  +
Sbjct: 122 EKLERDPRDSEWAEAVQLPLPAFRYRLHIGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQ 181

Query: 269 DLVQAGAVGVLQGVERFDPKRGFTLSTYIHYWIRKLMSSVVARNSRGIQIPWSLTKAMNQ 328
           DL+Q G++G+++  E+FD ++G+  STY  +WIR+ ++  +A  SR I++P  L + +++
Sbjct: 182 DLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISR 241

Query: 329 IQKARKVLNNGSSRYSDDD---------------IAKATGLPLA---------------- 388
           I+K  K+L+    R   ++               IAK+  LP++                
Sbjct: 242 IKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDF 301

Query: 389 ---------------------------------KVLAMRYGLVDFRPKSLEETGKLLQIS 404
                                             VL +RYGL D R K+LEE G++  ++
Sbjct: 302 IESDGETPEDQVSKNLLREDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVT 361

[Close]

BLAST of Carg22479 vs. Swiss-Prot
Match: sp|Q31QG5|SIGA3_SYNE7 (RNA polymerase sigma factor SigA3 OS=Synechococcus elongatus (strain PCC 7942) OX=1140 GN=sigA3 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 5.4e-22
Identity = 76/287 (26.48%), Postives = 139/287 (48.43%), Query Frame = 0


Query: 185 EVEISTGVKVVANLERIRETLEKETG-KISSMSCWANAAGVDKKDLQKQLQFGWFCQDEL 244
           EV +   V+    L+ +R+TL+ E G +  S   WA AAG+  ++L++Q   G   + ++
Sbjct: 30  EVVLGKRVQQWMKLQELRQTLQSEEGDRDPSDLEWAAAAGLSIEELRQQQHLGEQAKRKM 89

Query: 245 LRTTNSLVRFLSKKYQCSGLPMEDLVQAGAVGVLQGVERFDPKRGFTLSTYIHYWIRKLM 304
           +     LV  ++KKY    + + DL+Q G +G+ +GVE+FDP +G+  STY ++WIR+ +
Sbjct: 90  IEANLRLVVSVAKKYLKRNMDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAI 149

Query: 305 SSVVARNSRGIQIPWSLTKAMNQIQKARKVLNNGSSRYSD-DDIAKATGL---------- 364
           +  +A  +R I++P  +T+ +N+I+K ++ L+    R +   ++A A  L          
Sbjct: 150 TRAIAEKARTIRLPIHITEKLNKIKKMQRQLSQQLGRTATLPELAAALDLTPAQVRDYLE 209

Query: 365 ----PLA-------------------------------------------------KVLA 407
               PL+                                                 +V+A
Sbjct: 210 KARHPLSLDLRVGDNQDTELGDLLETDCTTPEEFTLQASMRRDIDRLLDQLTEQQRQVIA 269

[Close]

BLAST of Carg22479 vs. TrEMBL
Match: tr|A0A1S3BBM8|A0A1S3BBM8_CUCME (RNA polymerase sigma factor sigC OS=Cucumis melo OX=3656 GN=LOC103488161 PE=4 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 1.2e-143
Identity = 286/465 (61.51%), Postives = 326/465 (70.11%), Query Frame = 0


Query: 34  QINNKARPQGHLHYGLKCTRPSRVDDNFSAGTSLPTGKVSSFGMLMKNIDVLEETFAESG 93
           ++N+ A+    LHYG+K TRPS+V+DNFS+ TS+PTGK S FG+LM+N+DVLEETFAESG
Sbjct: 87  EMNSGAKSLSSLHYGIKSTRPSKVEDNFSSPTSMPTGKASPFGILMENLDVLEETFAESG 146

Query: 94  MLSLGRD----------------------------GQNDLAIEDGGYHNVNPKTDGQNDD 153
           MLSL RD                              +DL +EDG  HNVN KT+ QN D
Sbjct: 147 MLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPVEDGEDHNVNQKTNDQNCD 206

Query: 154 VVVYSGKRAGRRSVKERAVDNADKVASQLLTTRAGKEKFRNSSIFSRKRAF----KRPNV 213
           V VYSGKRAGRRSVK+RA+DNADKVAS+ L TRA KEK  +S+IFSRK++     +R  V
Sbjct: 207 VTVYSGKRAGRRSVKKRAMDNADKVASRPLATRAVKEKIHSSTIFSRKKSSNSSKRRLVV 266

Query: 214 ARNEVEISTGVKVVANLERIRETLEKETGKISSMSCWANAAGVDKKDLQKQLQFGWFCQD 273
           ARNE E+STG+KVVANLERIRETLEKE+G+I+SMSCWA AA VD KDLQKQLQFGWFC+D
Sbjct: 267 ARNEAEMSTGIKVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGWFCRD 326

Query: 274 ELLRTTNSLVRFLSKKYQCSGLPMEDLVQAGAVGVLQGVERFDPKRGFTLSTYIHYWIRK 333
           ELLR+TNSLV FL+KKY+CSGLPMEDLVQAGA+GVLQGVERFDPKRGF  STYI YWIRK
Sbjct: 327 ELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRK 386

Query: 334 LMSSVVARNSRGIQIPWSLTKAMNQIQKARKVLNNGSSRYSDDDIAKATGLPLAK----- 393
            MS VVARNSRGIQIPWSLTKA+NQIQKARKVLN G  RYSDDDIA+ATGLPLAK     
Sbjct: 387 SMSRVVARNSRGIQIPWSLTKAINQIQKARKVLNQGGRRYSDDDIARATGLPLAKVRVAS 446

Query: 394 -----------------------------------------------------------V 403
                                                                      V
Sbjct: 447 NCLKVVGSVDQKMGDGLNMKYMEFTADTSIQSPEETVKRKLMKKDIFNILQGLESRERQV 506

[Close]

BLAST of Carg22479 vs. TrEMBL
Match: tr|A0A0A0LLW1|A0A0A0LLW1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G372830 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.2e-138
Identity = 282/465 (60.65%), Postives = 322/465 (69.25%), Query Frame = 0


Query: 34  QINNKARPQGHLHYGLKCTRPSRVDDNFSAGTSLPTGKVSSFGMLMKNIDVLEETFAESG 93
           ++N+ A+  G +HYG+K TRPS+V+DNFS+ TSLPTGK S FG+LM+N+DVLEETF ESG
Sbjct: 87  EMNSGAKSLGPMHYGIKSTRPSKVEDNFSSCTSLPTGKASPFGILMENLDVLEETFTESG 146

Query: 94  MLSLGRD----------------------------GQNDLAIEDGGYHNVNPKTDGQNDD 153
           MLSL RD                              + L IE G  HNVN KT+ QND+
Sbjct: 147 MLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDSSGLPIEGGEDHNVNQKTNDQNDN 206

Query: 154 VVVYSGKRAGRRSVKERAVDNADKVASQLLTTRAGKEKFRNSSIFSRKRAF----KRPNV 213
           V VYS K+AGRRSVK+RA+DNADK+AS+LLTTRA KEK   S++FSRK++     +R  V
Sbjct: 207 VTVYSAKKAGRRSVKKRAMDNADKIASRLLTTRAVKEKIHRSTVFSRKKSSNSSKRRLIV 266

Query: 214 ARNEVEISTGVKVVANLERIRETLEKETGKISSMSCWANAAGVDKKDLQKQLQFGWFCQD 273
           A NE E+STGVKVVANLERIRETLEKE+G+I+SMSCWA AA VD KDLQKQLQFG FC+D
Sbjct: 267 AINEAEMSTGVKVVANLERIRETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGSFCRD 326

Query: 274 ELLRTTNSLVRFLSKKYQCSGLPMEDLVQAGAVGVLQGVERFDPKRGFTLSTYIHYWIRK 333
           ELLR+TNSLV FL+KKY+CSGLPMEDLVQAGA+GVLQGVERFDPKRGF +STYI YWIRK
Sbjct: 327 ELLRSTNSLVVFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRISTYIQYWIRK 386

Query: 334 LMSSVVARNSRGIQIPWSLTKAMNQIQKARKVLNNGSSRYSDDDIAKATGLPLAK----- 393
            MS VVARNSRGIQIP SLTKA+NQIQKARKVLN+   RYSDDDIA+ATGLPLAK     
Sbjct: 387 SMSRVVARNSRGIQIPRSLTKAINQIQKARKVLNHSGRRYSDDDIARATGLPLAKVRVAS 446

Query: 394 -----------------------------------------------------------V 403
                                                                      V
Sbjct: 447 NCLKVVGSNDQKMGDGVNMKYMEFTADMSIQSPEETVKRKLMKKDIFNILQRLESRERQV 506

[Close]

BLAST of Carg22479 vs. TrEMBL
Match: tr|A0A061GKA9|A0A061GKA9_THECC (RNApolymerase sigma-subunit C, putative OS=Theobroma cacao OX=3641 GN=TCM_037242 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 8.0e-79
Identity = 180/440 (40.91%), Postives = 253/440 (57.50%), Query Frame = 0


Query: 59  DNFSAGTSLPTGKVSSFGMLMKNIDVLEETFAESGMLSLGRD------------------ 118
           D  S+ TS    K S + +LM+N+DVLEETFA+S +L+L R+                  
Sbjct: 399 DKSSSRTSPQACKASHYSLLMENLDVLEETFADSDVLTLEREILLQLGRFGALKLFNTCL 458

Query: 119 -----GQNDLAIED----GGYHNVNPKTDGQNDDVVVYSGKRAGRRSVKERAVDNADKVA 178
                  N L + D     G  N+N   DGQ D++VV S K+  R+ ++ERA++N   ++
Sbjct: 459 SRTLKASNILDLSDVPANSGDCNMNLSVDGQKDNIVVCSRKKKQRKKIRERALENPTIIS 518

Query: 179 SQLLTTRAGKEKFRNSSIFSRKRA----FKRPNVARNEVEISTGVKVVANLERIRETLEK 238
           +QL+ +     +F+   + S KR      +R  +ARNE E+S GVKVVANLERIR TLE+
Sbjct: 519 TQLMPSNTLHGRFQKPKVSSAKRVSDSRSRRLRIARNEAEMSKGVKVVANLERIRTTLEE 578

Query: 239 ETGKISSMSCWANAAGVDKKDLQKQLQFGWFCQDELLRTTNSLVRFLSKKYQCSGLPMED 298
           ETG+ +S+SCWA AAGV +K LQ+ L+FGW+C+DELLR+T SLV + ++ Y+  G+  ED
Sbjct: 579 ETGRAASLSCWAEAAGVSEKVLQQHLRFGWYCRDELLRSTRSLVLYFARNYRGLGIAHED 638

Query: 299 LVQAGAVGVLQGVERFDPKRGFTLSTYIHYWIRKLMSSVVARNSRGIQIPWSLTKAMNQI 358
           L+QAG++GVLQG ERFD  RG+  STY+ +WIRK +S +VAR++RGIQ+P +L++A+ QI
Sbjct: 639 LIQAGSLGVLQGAERFDHTRGYRFSTYVQFWIRKSVSRIVARHARGIQVPCTLSRAIVQI 698

Query: 359 QKARKVLNNGSSRYSDDD-IAKATGLPLAK------------------------------ 403
           QKARK L+    +Y D+D IAK TGL LAK                              
Sbjct: 699 QKARKALSKSHGKYPDEDAIAKFTGLSLAKIRSANKCMRVVGSIDQKIGDCMNAKYLEFI 758

[Close]

BLAST of Carg22479 vs. TrEMBL
Match: tr|A0A0G2SWU1|A0A0G2SWU1_9ROSI (Sigma factor OS=Hypseocharis bilobata OX=253189 GN=sig3 PE=2 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 1.4e-78
Identity = 188/469 (40.09%), Postives = 258/469 (55.01%), Query Frame = 0


Query: 32  ISQINNKARPQGHLHYGLKCTRPSRVDDNFSAGTSLPTGKVSSFGMLMKNIDVLEETFAE 91
           + ++ +  R  G LH  ++ T     +   S+GTSL   + + F +LM+N+DVLEETFA+
Sbjct: 86  MGEMQSNKRSYGGLHSIIEDTLMHVGEGISSSGTSLRVSRPAHFSLLMENLDVLEETFAD 145

Query: 92  SGMLSLGRD-----------------------------GQNDLAIEDGGYHNVNPKTDGQ 151
             +L L RD                               +D+  ED     VN     +
Sbjct: 146 KNVLRLERDILLQLGRLGALKLFNIFLSSRTIETSNIFDLSDVPTEDIKDCKVNSTKHER 205

Query: 152 NDDVVVYSGKRAGRRSVKERAVDNADKVASQLLTTRAGKEKFRNSSIFSRKRAFKRPN-- 211
               + +SGK+  R+S + R  +N+ K++S LL ++  +  F+  SI S KRA    +  
Sbjct: 206 ITKKIFHSGKKEKRKSRRARVSENSKKISSLLLPSKTIQSGFQQPSISSAKRASNSRSRI 265

Query: 212 --VARNEVEISTGVKVVANLERIRETLEKETGKISSMSCWANAAGVDKKDLQKQLQFGWF 271
             +ARNE E++ GVK +A LERIR TLE  TG+++S+SCWA AAG+D K L+++L FGW+
Sbjct: 266 LMIARNEAEMARGVKEIAELERIRTTLEDGTGQVASISCWAEAAGLDPKVLRQRLHFGWY 325

Query: 272 CQDELLRTTNSLVRFLSKKYQCSGLPMEDLVQAGAVGVLQGVERFDPKRGFTLSTYIHYW 331
           CQDELLR+T SL+ +L++ Y+  G+  EDL+QAG +GVLQG ERFD  RGF  STY+ +W
Sbjct: 326 CQDELLRSTRSLIIYLTRYYRGVGVAFEDLLQAGKMGVLQGAERFDHTRGFKFSTYVQFW 385

Query: 332 IRKLMSSVVARNSRGIQIPWSLTKAMNQIQKARKVLNNGSSRYSDD-DIAKATGLPLA-- 391
           IRK MS VV R+SR +QIP+SL++A+NQIQKA+K L N   +Y DD +IAK TGL LA  
Sbjct: 386 IRKSMSMVVTRDSRNMQIPYSLSQAINQIQKAQKALMNSHGKYPDDTEIAKFTGLSLAKI 445

Query: 392 ------------------------------------------------------------ 403
                                                                       
Sbjct: 446 ASAKKCPRFVGSLDRKVGDSLKGNYLEILPDKSMKSPEEALMRQHMRNYLHDLLKDLDPK 505

[Close]

BLAST of Carg22479 vs. TrEMBL
Match: tr|A0A2P4I0D2|A0A2P4I0D2_QUESU (Rna polymerase sigma factor sigc OS=Quercus suber OX=58331 GN=CFP56_41806 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 2.0e-77
Identity = 183/452 (40.49%), Postives = 260/452 (57.52%), Query Frame = 0


Query: 58  DDNFSAGTSLPTGKVSSFGMLMKNIDVLEETFAESGMLSLGRD----------------- 117
           +  F++ TSL  GK ++F +L++N+ VLEETF +S +L L RD                 
Sbjct: 110 EGKFTSCTSLQGGKEANFNLLIENLHVLEETFVDSDVLRLERDIMQQLGRLGAINLFNTC 169

Query: 118 ----GQNDLAIE------DGGYHNVNPKTD--------GQNDD----VVVYSGKRAGRRS 177
                QN   ++      D   H    KTD        G+ DD    VVV S K+ G   
Sbjct: 170 LSRTVQNSNLLDLSDIPTDYTEHEKKSKTDEHAEDEMKGKTDDCIGKVVVRSRKKRGXXX 229

Query: 178 VKERAVDNADKVASQLLTTRAGKEKFRNSSIFSRKRA----FKRPNVARNEVEISTGVKV 237
                ++NA + +  LL ++  +++F   ++ S KRA     +R  ++RNE E+STGVKV
Sbjct: 230 XXXXTLENACETSLLLLPSKIIQQRFGQPNVSSAKRASSSRSRRLKISRNEAEMSTGVKV 289

Query: 238 VANLERIRETLEKETGKISSMSCWANAAGVDKKDLQKQLQFGWFCQDELLRTTNSLVRFL 297
           VANLERIR TLE+ETG+++++SCWA AAG+D+K LQ+ L FGW+C+DE++R+T SLV +L
Sbjct: 290 VANLERIRRTLEEETGRVATISCWAEAAGLDEKVLQQNLHFGWYCRDEIIRSTRSLVLYL 349

Query: 298 SKKYQCSGLPMEDLVQAGAVGVLQGVERFDPKRGFTLSTYIHYWIRKLMSSVVARNSRGI 357
           ++ Y+  G+ +EDL+QAG +GVLQG ERFD  RG+  STY+ YWIRK MS +VA+++RGI
Sbjct: 350 ARNYRGLGIALEDLIQAGNLGVLQGAERFDHTRGYRFSTYVQYWIRKSMSRMVAQHARGI 409

Query: 358 QIPWSLTKAMNQIQKARKVLNNGSSRYSDDD-IAKATGLPLAKV---------------- 402
           QIP++L  A+NQIQKA+  LN+G  +Y DDD IAK TGL LAK+                
Sbjct: 410 QIPYTLCSAINQIQKAKTALNSGHKKYPDDDEIAKHTGLSLAKIRSASKCLRVVGSIDQK 469

The following BLAST results are available for this feature:

BLAST of Carg22479 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023002340.1	1.5e-169	90.17	RNA polymerase sigma factor sigC-like isoform X2 [Cucurbita maxima]	[more]
XP_023002341.1	1.5e-169	93.58	RNA polymerase sigma factor sigC-like isoform X3 [Cucurbita maxima]	[more]
XP_023002339.1	2.5e-169	93.87	RNA polymerase sigma factor sigC-like isoform X1 [Cucurbita maxima]	[more]
XP_023538504.1	6.9e-159	90.12	RNA polymerase sigma factor sigC-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023538506.1	2.0e-158	90.09	RNA polymerase sigma factor sigC-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg22479 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G53920.1	1.1e-62	36.05	RNApolymerase sigma-subunit C	[more]
AT1G08540.1	2.6e-35	29.21	RNApolymerase sigma subunit 2	[more]
AT2G36990.1	1.9e-22	23.26	RNApolymerase sigma-subunit F	[more]
AT5G13730.1	2.2e-18	26.07	sigma factor 4	[more]
AT1G64860.1	1.1e-17	29.65	sigma factor A	[more]

BLAST of Carg22479 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O24621\|SIGC_ARATH	2.0e-61	36.05	RNA polymerase sigma factor sigC OS=Arabidopsis thaliana OX=3702 GN=SIGC PE=2 SV...	[more]
sp\|O22056\|SIGB_ARATH	4.7e-34	29.21	RNA polymerase sigma factor sigB OS=Arabidopsis thaliana OX=3702 GN=SIGB PE=2 SV...	[more]
sp\|P38023\|SIGA1_SYNE7	4.0e-25	26.92	RNA polymerase sigma factor SigA1 OS=Synechococcus elongatus (strain PCC 7942) O...	[more]
sp\|P26683\|SIGA_NOSS1	8.9e-25	25.86	RNA polymerase sigma factor SigA OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UT...	[more]
sp\|Q31QG5\|SIGA3_SYNE7	5.4e-22	26.48	RNA polymerase sigma factor SigA3 OS=Synechococcus elongatus (strain PCC 7942) O...	[more]

BLAST of Carg22479 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BBM8\|A0A1S3BBM8_CUCME	1.2e-143	61.51	RNA polymerase sigma factor sigC OS=Cucumis melo OX=3656 GN=LOC103488161 PE=4 SV...	[more]
tr\|A0A0A0LLW1\|A0A0A0LLW1_CUCSA	1.2e-138	60.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G372830 PE=4 SV=1	[more]
tr\|A0A061GKA9\|A0A061GKA9_THECC	8.0e-79	40.91	RNApolymerase sigma-subunit C, putative OS=Theobroma cacao OX=3641 GN=TCM_037242...	[more]
tr\|A0A0G2SWU1\|A0A0G2SWU1_9ROSI	1.4e-78	40.09	Sigma factor OS=Hypseocharis bilobata OX=253189 GN=sig3 PE=2 SV=1	[more]
tr\|A0A2P4I0D2\|A0A2P4I0D2_QUESU	2.0e-77	40.49	Rna polymerase sigma factor sigc OS=Quercus suber OX=58331 GN=CFP56_41806 PE=4 S...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006352	DNA-templated transcription, initiation
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR013325	RNA_pol_sigma_r2
IPR013324	RNA_pol_sigma_r3/r4-like
IPR007630	RNA_pol_sigma70_r4
IPR014284	RNA_pol_sigma-70_dom
IPR007627	RNA_pol_sigma70_r2
IPR036388	WH-like_DNA-bd_sf
IPR000943	RNA_pol_sigma70

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006352	DNA-templated transcription, initiation
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22479-RA	Carg22479-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 390..417
None	No IPR available	GENE3D	G3DSA:1.10.601.10		coord: 131..315 e-value: 1.9E-21 score: 79.0
None	No IPR available	PANTHER	PTHR30603	RNA POLYMERASE SIGMA FACTOR RPO	coord: 65..357
None	No IPR available	PANTHER	PTHR30603:SF13	RNA POLYMERASE SIGMA FACTOR SIGC	coord: 65..357
None	No IPR available	PANTHER	PTHR30603	RNA POLYMERASE SIGMA FACTOR RPO	coord: 356..405
None	No IPR available	PANTHER	PTHR30603:SF13	RNA POLYMERASE SIGMA FACTOR SIGC	coord: 356..405
IPR000943	RNA polymerase sigma-70	PRINTS	PR00046	SIGMA70FCT	coord: 371..386 score: 35.24 coord: 386..397 score: 50.86 coord: 267..280 score: 41.8 coord: 291..299 score: 53.69
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	G3DSA:1.10.10.10		coord: 354..412 e-value: 9.1E-14 score: 52.9
IPR007627	RNA polymerase sigma-70 region 2	PFAM	PF04542	Sigma70_r2	coord: 249..312 e-value: 1.3E-12 score: 47.2
IPR014284	RNA polymerase sigma-70 like domain	TIGRFAM	TIGR02937	TIGR02937	coord: 241..399 e-value: 9.2E-17 score: 59.1
IPR007630	RNA polymerase sigma-70 region 4	PFAM	PF04545	Sigma70_r4	coord: 356..398 e-value: 2.1E-10 score: 39.8
IPR013324	RNA polymerase sigma factor, region 3/4-like	SUPERFAMILY	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors	coord: 356..400
IPR013325	RNA polymerase sigma factor, region 2	SUPERFAMILY	SSF88946	Sigma2 domain of RNA polymerase sigma factors	coord: 183..312

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22479	Cla022188	Watermelon (97103) v1	carwmB0819
Carg22479	Csa2G372830	Cucumber (Chinese Long) v2	carcuB0836
Carg22479	MELO3C011121	Melon (DHL92) v3.5.1	carmeB0815
Carg22479	ClCG08G012020	Watermelon (Charleston Gray)	carwcgB0796
Carg22479	CSPI02G21980	Wild cucumber (PI 183967)	carcpiB0858
Carg22479	Cucsa.160980	Cucumber (Gy14) v1	carcgyB0938
Carg22479	CmaCh05G005750	Cucurbita maxima (Rimu)	carcmaB1142
Carg22479	CmaCh12G002340	Cucurbita maxima (Rimu)	carcmaB1140
Carg22479	Cp4.1LG11g04970	Cucurbita pepo (Zucchini)	carcpeB1152
Carg22479	Cp4.1LG07g02680	Cucurbita pepo (Zucchini)	carcpeB1153
Carg22479	CsGy2G021740	Cucumber (Gy14) v2	carcgybB0811
Carg22479	MELO3C011121.2	Melon (DHL92) v3.6.1	carmedB0826
Carg22479	CsaV3_2G030610	Cucumber (Chinese Long) v3	carcucB0861
Carg22479	Cla97C08G155170	Watermelon (97103) v2	carwmbB0856
Carg22479	Bhi04G000724	Wax gourd	carwgoB0956

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg22479	Carg08264	Silver-seed gourd	carcarB070

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22479	Cucurbita moschata (Rifu)	carcmoB1111
Carg22479	Bottle gourd (USVL1VR-Ls)	carlsiB752