Cucsa.158230 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCTTGATAACTACAAAACCCTCTCTCTCTCTCTCTCTTTCTGTCTCAAAGTAACAAAAAAGTTTGGTAGAGAGAGAAAGATTATGGTTCACCCTAAACTTTTCTCAACTCTTCTTCTCCTTTCATGTTTTCTTCTTCTTTCTTTCACTCATGGTACTCAAACTTCTTCTTCTATTTATTTTCTAATCCTTTTTTCATGTATATTTCTATATATATATTCGTCTCCTGAGCTCACATCGTTTATTTTTAATTTTTTTTCTCAAGGATTAAAAGTGGAAATGATTGAATCTTTGGGACATGGAAGCAATGTTAGAATTAGTCCATCACTCAAGGTGTGATTTTCTTTTTCAACAGTTGATAAAAGGGTATGTTTTTGTTTTAAAATTTTGGAATAATAATAATTTGATTATTGTGTTAACTTAGCAGGGAATTGGTGGAAAATCAAGAAAAATGATGATTGAAATAATGGATTATGCAGATCCAGGGCCAAATACTAATACAAGAAGTGGGTATCTTAATCCTCCTCCTCCTCCTTCACCAGCTACTTAATTAATTTGTAATAGTTTTTCTTTTCTTTTTCTAATAAAAAGACCACAGCTAATAATATATATTGTTTAATTTCTGTGAGGTTTTTCATATCTAAGATATATTATGAATATTATTTTTCTTTTAACTTATTTATTCCAAGTGTAATTCATGCATGGTGGTGAGATAAATTGGAGGTTTTGTTGTCTTTT TCCTTGATAACTACAAAACCctctctctctctctctctttctgtctcAAAGTAACAAAAAAGTTTGGTAGAGAGAGAAAGATTATGGTTCACCCTAAACTTTTCTCAACTCTTCTTCTCCTTTCATGTTTTCTTCTTCTTTCTTTCACTCATGGATTAAAAGTGGAAATGATTGAATCTTTGGGACATGGAAGCAATGTTAGAATTAGTCCATCACTCAAGGGAATTGGTGGAAAATCAAGAAAAATGATGATTGAAATAATGGATTATGCAGATCCAGGGCCAAATACTAATACAAGAAGTGGGTATCTTAATCCTCCTCCTCCTCCTTCACCAGCTACTTAATTAATTTGTAATAGTTTTTCTTTTCTTTTTCTAATAAAAAGACCACAGCTAATAATATATATTGTTTAATTTCTGTGAGGTTTTTCATATCTAAGATATATTATGAATATTATTTTTCTTTTAACTTATTTATTCCAAGTGTAATTCATGCATGGTGGTGAGATAAATTGGAGGTTTTGTTGTCTTTT ATGGTTCACCCTAAACTTTTCTCAACTCTTCTTCTCCTTTCATGTTTTCTTCTTCTTTCTTTCACTCATGGATTAAAAGTGGAAATGATTGAATCTTTGGGACATGGAAGCAATGTTAGAATTAGTCCATCACTCAAGGGAATTGGTGGAAAATCAAGAAAAATGATGATTGAAATAATGGATTATGCAGATCCAGGGCCAAATACTAATACAAGAAGTGGGTATCTTAATCCTCCTCCTCCTCCTTCACCAGCTACTTAA MVHPKLFSTLLLLSCFLLLSFTHGLKVEMIESLGHGSNVRISPSLKGIGGKSRKMMIEIMDYADPGPNTNTRSGYLNPPPPPSPAT*
BLAST of Cucsa.158230 vs. TrEMBL
Match: A0A0A0KSB7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G636600 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 3.0e-42 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1
BLAST of Cucsa.158230 vs. TrEMBL
Match: A0A0A0LCS0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G825030 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 4.9e-08 Identity = 39/89 (43.82%), Postives = 51/89 (57.30%), Query Frame = 1
BLAST of Cucsa.158230 vs. TrEMBL
Match: V4UXA1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013233mg PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 7.0e-07 Identity = 35/76 (46.05%), Postives = 47/76 (61.84%), Query Frame = 1
BLAST of Cucsa.158230 vs. TrEMBL
Match: A0A0B0N658_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_14499 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.2e-06 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 1
BLAST of Cucsa.158230 vs. TrEMBL
Match: A0A0D2TB26_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G079400 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.2e-06 Identity = 38/82 (46.34%), Postives = 49/82 (59.76%), Query Frame = 1
BLAST of Cucsa.158230 vs. NCBI nr
Match: gi|700197291|gb|KGN52468.1| (hypothetical protein Csa_5G636600 [Cucumis sativus]) HSP 1 Score: 178.7 bits (452), Expect = 4.3e-42 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1
BLAST of Cucsa.158230 vs. NCBI nr
Match: gi|778685535|ref|XP_011652234.1| (PREDICTED: uncharacterized protein LOC105435001 [Cucumis sativus]) HSP 1 Score: 65.1 bits (157), Expect = 7.0e-08 Identity = 39/89 (43.82%), Postives = 51/89 (57.30%), Query Frame = 1
BLAST of Cucsa.158230 vs. NCBI nr
Match: gi|567877159|ref|XP_006431169.1| (hypothetical protein CICLE_v10013233mg [Citrus clementina]) HSP 1 Score: 61.2 bits (147), Expect = 1.0e-06 Identity = 35/76 (46.05%), Postives = 47/76 (61.84%), Query Frame = 1
BLAST of Cucsa.158230 vs. NCBI nr
Match: gi|763773712|gb|KJB40835.1| (hypothetical protein B456_007G079400 [Gossypium raimondii]) HSP 1 Score: 60.5 bits (145), Expect = 1.7e-06 Identity = 38/82 (46.34%), Postives = 49/82 (59.76%), Query Frame = 1
BLAST of Cucsa.158230 vs. NCBI nr
Match: gi|728830510|gb|KHG09953.1| (hypothetical protein F383_14499 [Gossypium arboreum]) HSP 1 Score: 60.5 bits (145), Expect = 1.7e-06 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |