Cucsa.157520 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.157520
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Phosphopantothenoylcysteine decarboxylase
Location	scaffold01141 : 464376 .. 465563 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGTCAGCAACAGGCAAAGAAAACCCCGCGTTCTTCTTGCTGCTTGTGGGAGTGTTGCGGCATTGAAGTTTAGAACCATATGCCAATGTTTTtCTGAATGGGCCGACGTTCGAGCGGTTGCCACAAGAGCAGCGCTGTTCTTCATCGATCGACAAGCCCTCCCAAAGAACGTCTTTCTTTACATCGACGACGATGATTGGTCCAGTTGGAAGAAAATTGGTGACAATGTCCTTCACATTCATCTTTGCAACTGGGCTGATATTATGGTTATCGCTCCACTCTCGGCAAACACACTTGGAAAGGTTATATTATATGATTGATCATTATTTATACAAGTCTTGCCTTTCAGTCTCTACTTCAAGCTAAACATATAACTTAACTACCCATAACTAAACTTATATTGTAATTAACAGGCAGAGCATCATTGTCACTTGGTGCCCTTTAGTTTTGTGCAGCTTTTGACGGATGTCCCATAGCTCTTCATTTAACTAAAAAaTTTATGTTTCGTGCATTAAGAATCTTGGACCAACTTTAATTTTGATGGACTCAACTTCTTAAGTTGGGGCAACTAGATATTGTGCATTTGGCTTGTATTTATTCTGATTCAACTTACTTGACGAACACCCTTTCTGTTTTCTAATCAGAAGTACAAATCTTGGCATTCTTTTTAAATTTCTTCTCCAAATATTTTAGTTTCTTTTACTCTAGGTCCTGGTATGAACATTGGCTATGTAGTTGGTTTGTTATTTAGGTTCTCATGTTTATCTGTCATTACACCAATGGGGTTTTGATCCAAATAAATCTTGTGGTTTAGTAAACTTTATCAATGTCCATGTTTCTTATCAGATCGCGGGAGGATTGTGTGATAATCTATTAACTTGCATAGTACGAGCATGGGACTACACCAAGCCTATATTTGTTGCACCAGCCATGAACGCCTTGATGTGGAATAATTCTTTCACTGAAAGACATCTTGTGCTTGTTGATGATCTTGGAATTACGCTTATACGACCAGTGGCAGATGGAATGGAACGATGCAATGGTGTCATGGCCGAACCAAGCCACATTTATGCAACTGTGGTTCTCTTCATGGAATTACAACGTAAGAAAAaCAAAaCAGCCCACCAGTAACTGTAAAATCGTGGAAGATGGCCATTTTTtCTTtAAGTTGATTGGCAAATGGG

mRNA sequence

ATGCAAGTCAGCAACAGGCAAAGAAAACCCCGCGTTCTTCTTGCTGCTTGTGGGAGTGTTGCGGCATTGAAGTTTAGAACCATATGCCAATGTTTTTCTGAATGGGCCGACGTTCGAGCGGTTGCCACAAGAGCAGCGCTGTTCTTCATCGATCGACAAGCCCTCCCAAAGAACGTCTTTCTTTACATCGACGACGATGATTGGTCCAGTTGGAAGAAAATTGGTGACAATGTCCTTCACATTCATCTTTGCAACTGGGCTGATATTATGGTTATCGCTCCACTCTCGGCAAACACACTTGGAAAGATCGCGGGAGGATTGTGTGATAATCTATTAACTTGCATAGTACGAGCATGGGACTACACCAAGCCTATATTTGTTGCACCAGCCATGAACGCCTTGATGTGGAATAATTCTTTCACTGAAAGACATCTTGTGCTTGTTGATGATCTTGGAATTACGCTTATACGACCAGTGGCAGATGGAATGGAACGATGCAATGGTGTCATGGCCGAACCAAGCCACATTTATGCAACTGTGGTTCTCTTCATGGAATTACAACGTAAGAAAAACAAAACAGCCCACCAGTAACTGTAAAATCGTGGAAGATGGCCATTTTTTCTTTAAGTTGATTGGCAAATGGG

Coding sequence (CDS)

ATGCAAGTCAGCAACAGGCAAAGAAAACCCCGCGTTCTTCTTGCTGCTTGTGGGAGTGTTGCGGCATTGAAGTTTAGAACCATATGCCAATGTTTTtCTGAATGGGCCGACGTTCGAGCGGTTGCCACAAGAGCAGCGCTGTTCTTCATCGATCGACAAGCCCTCCCAAAGAACGTCTTTCTTTACATCGACGACGATGATTGGTCCAGTTGGAAGAAAATTGGTGACAATGTCCTTCACATTCATCTTTGCAACTGGGCTGATATTATGGTTATCGCTCCACTCTCGGCAAACACACTTGGAAAGATCGCGGGAGGATTGTGTGATAATCTATTAACTTGCATAGTACGAGCATGGGACTACACCAAGCCTATATTTGTTGCACCAGCCATGAACGCCTTGATGTGGAATAATTCTTTCACTGAAAGACATCTTGTGCTTGTTGATGATCTTGGAATTACGCTTATACGACCAGTGGCAGATGGAATGGAACGATGCAATGGTGTCATGGCCGAACCAAGCCACATTTATGCAACTGTGGTTCTCTTCATGGAATTACAACGTAAGAAAAaCAAAaCAGCCCACCAGTAA

Protein sequence

MQVSNRQRKPRVLLAACGSVAALKFRTICQCFSEWADVRAVATRAALFFIDRQALPKNVFLYIDDDDWSSWKKIGDNVLHIHLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYTKPIFVAPAMNALMWNNSFTERHLVLVDDLGITLIRPVADGMERCNGVMAEPSHIYATVVLFMELQRKKNKTAHQ*

Homology

[Close]

BLAST of Cucsa.157520 vs. Swiss-Prot
Match: HAL3B_ARATH (Probable phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana GN=HAL3B PE=2 SV=2)

HSP 1 Score: 273.9 bits (699), Expect = 1.4e-72
Identity = 130/195 (66.67%), Postives = 159/195 (81.54%), Query Frame = 1


Query: 1   MQVSNRQRKPRVLLAACGSVAALKFRTICQCFSEWADVRAVATRAALFFIDRQALPKNVF 60
           M+V    RKPR+LLAA GSVA++KF  +C CFSEWA+V+AVA++++L F+D+ +LP+NV 
Sbjct: 3   MEVDTVTRKPRILLAASGSVASIKFSNLCHCFSEWAEVKAVASKSSLNFVDKPSLPQNVT 62

Query: 61  LYIDDDDWSSWKKIGDNVLHIHLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120
           LY D+D+WSSW KIGD VLHI L  WAD+M+IAPLSANTL KIAGGLCDNLLTCIVRAWD
Sbjct: 63  LYTDEDEWSSWNKIGDPVLHIELRRWADVMIIAPLSANTLAKIAGGLCDNLLTCIVRAWD 122

Query: 121 YTKPIFVAPAMNALMWNNSFTERHLVLVDDLGITLIRPVADGM---ERCNGVMAEPSHIY 180
           Y+KP+FVAPAMN LMWNN FTERHLVL+D+LGITLI P+   +   +  NG MAEPS IY
Sbjct: 123 YSKPLFVAPAMNTLMWNNPFTERHLVLLDELGITLIPPIKKKLACGDYGNGAMAEPSLIY 182

Query: 181 ATVVLFMELQRKKNK 193
           +TV LF E Q +K +
Sbjct: 183 STVRLFWESQARKQR 197

[Close]

BLAST of Cucsa.157520 vs. Swiss-Prot
Match: HAL3A_ARATH (Phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana GN=HAL3A PE=1 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.0e-71
Identity = 129/190 (67.89%), Postives = 155/190 (81.58%), Query Frame = 1


Query: 1   MQVSNRQRKPRVLLAACGSVAALKFRTICQCFSEWADVRAVATRAALFFIDRQALPKNVF 60
           M+V+   RKPRVLLAA GSVAA+KF  +C CF+EWA+VRAV T+++L F+D+ +LP+ V 
Sbjct: 11  MEVNTTPRKPRVLLAASGSVAAIKFGNLCHCFTEWAEVRAVVTKSSLHFLDKLSLPQEVT 70

Query: 61  LYIDDDDWSSWKKIGDNVLHIHLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120
           LY D+D+WSSW KIGD VLHI L  WAD++VIAPLSANTLGKIAGGLCDNLLTCI+RAWD
Sbjct: 71  LYTDEDEWSSWNKIGDPVLHIELRRWADVLVIAPLSANTLGKIAGGLCDNLLTCIIRAWD 130

Query: 121 YTKPIFVAPAMNALMWNNSFTERHLVLVDDLGITLIRPVADGM---ERCNGVMAEPSHIY 180
           YTKP+FVAPAMN LMWNN FTERHL+ +D+LGITLI P+   +   +  NG MAEPS IY
Sbjct: 131 YTKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPPIKKRLACGDYGNGAMAEPSLIY 190

Query: 181 ATVVLFMELQ 188
           +TV LF E Q
Sbjct: 191 STVRLFWESQ 200

[Close]

BLAST of Cucsa.157520 vs. Swiss-Prot
Match: HAL3_ORYSJ (Phosphopantothenoylcysteine decarboxylase OS=Oryza sativa subsp. japonica GN=HAL3 PE=1 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 1.5e-66
Identity = 124/182 (68.13%), Postives = 146/182 (80.22%), Query Frame = 1


Query: 9   KPRVLLAACGSVAALKFRTICQCFSEWADVRAVATRAALFFIDRQALPKNVFLYIDDDDW 68
           KPRVLLAA GSVAA+KF ++C+ FSEWA+VRAVAT+A+L FIDR +LP N+ LY DDD+W
Sbjct: 20  KPRVLLAASGSVAAIKFESLCRSFSEWAEVRAVATKASLHFIDRTSLPSNIILYTDDDEW 79

Query: 69  SSWKKIGDNVLHIHLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYTKPIFVA 128
           S+WKKIGD VLHI L  WADIMVIAPLSANTL KIAGGLCDNLLTCIVRAWDY+KP+FVA
Sbjct: 80  STWKKIGDEVLHIELRKWADIMVIAPLSANTLAKIAGGLCDNLLTCIVRAWDYSKPLFVA 139

Query: 129 PAMNALMWNNSFTERHLVLVDDLGITLIRPVADGM---ERCNGVMAEPSHIYATVVLFME 188
           PAMN  MWNN FT RHL  ++ LGI+L+ P+   +   +  NG MAEPS I +TV L  +
Sbjct: 140 PAMNTFMWNNPFTSRHLETINLLGISLVPPITKRLACGDYGNGAMAEPSVIDSTVRLACK 199

[Close]

BLAST of Cucsa.157520 vs. Swiss-Prot
Match: COAC_MOUSE (Phosphopantothenoylcysteine decarboxylase OS=Mus musculus GN=Ppcdc PE=1 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.4e-32
Identity = 79/183 (43.17%), Postives = 104/183 (56.83%), Query Frame = 1


Query: 3   VSNRQRKPRVLLAACGSVAALKFRTICQCFSE--WADVRAVATRAALFFIDRQALPKNVF 62
           V + +RK RVL+   GSVAALK   +     +    +V  V T  A  F   Q +P  V 
Sbjct: 11  VPSEERKFRVLVGVTGSVAALKLPLLVSKLLDVPGLEVTVVTTERAKHFYSPQDVP--VT 70

Query: 63  LYIDDDDWSSWKKIGDNVLHIHLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 122
           LY D D+W  WK+  D VLHI L  WAD+M++APL ANTLGK+A G+CDNLLTC++RAWD
Sbjct: 71  LYSDADEWEMWKRRSDPVLHIDLRRWADLMLVAPLDANTLGKVASGICDNLLTCVIRAWD 130

Query: 123 YTKPIFVAPAMNALMWNNSFTERHLVLVDDLGITLIRPVADGM---ERCNGVMAEPSHIY 181
             KP+   PAMN  MW +  T + +  +   G   I  V+  +   ++  G MAE   I 
Sbjct: 131 LNKPLLFCPAMNTAMWEHPLTAQQVAQLKAFGYVEIPCVSKKLVCGDQGLGAMAEVETIV 190

[Close]

BLAST of Cucsa.157520 vs. Swiss-Prot
Match: COAC_HUMAN (Phosphopantothenoylcysteine decarboxylase OS=Homo sapiens GN=PPCDC PE=1 SV=2)

HSP 1 Score: 132.5 bits (332), Expect = 5.1e-30
Identity = 79/184 (42.93%), Postives = 102/184 (55.43%), Query Frame = 1


Query: 7   QRKPRVLLAACGSVAALKFRTICQCFSE--WADVRAVATRAALFFIDRQALPKNVFLYID 66
           +RK  VL+   GSVAALK   +     +    +V  V T  A  F   Q +P  V LY D
Sbjct: 15  ERKFHVLVGVTGSVAALKLPLLVSKLLDIPGLEVAVVTTERAKHFYSPQDIP--VTLYSD 74

Query: 67  DDDWSSWKKIGDNVLHIHLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYTKP 126
            D+W  WK   D VLHI L  WAD++++APL ANTLGK+A G+CDNLLTC++RAWD +KP
Sbjct: 75  ADEWEIWKSRSDPVLHIDLRRWADLLLVAPLDANTLGKVASGICDNLLTCVMRAWDRSKP 134

Query: 127 IFVAPAMNALMWNNSFTERHLVLVDDLGITLIRPVADGM---ERCNGVMAEPSHIYATV- 184
           +   PAMN  MW +  T + +  +   G   I  VA  +   +   G MAE   I   V 
Sbjct: 135 LLFCPAMNTAMWEHPITAQQVDQLKAFGYVEIPCVAKKLVCGDEGLGAMAEVGTIVDKVK 194

[Close]

BLAST of Cucsa.157520 vs. TrEMBL
Match: A0A0A0LP03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G002720 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 4.5e-110
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 1


Query: 1   MQVSNRQRKPRVLLAACGSVAALKFRTICQCFSEWADVRAVATRAALFFIDRQALPKNVF 60
           MQVSNRQRKPRVLLAACGSVAALKFRTICQCFSEWADVRAVATRAALFFIDRQALPKNVF
Sbjct: 1   MQVSNRQRKPRVLLAACGSVAALKFRTICQCFSEWADVRAVATRAALFFIDRQALPKNVF 60

Query: 61  LYIDDDDWSSWKKIGDNVLHIHLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120
           LYIDDDDWSSWKKIGDNVLHIHLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD
Sbjct: 61  LYIDDDDWSSWKKIGDNVLHIHLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120

Query: 121 YTKPIFVAPAMNALMWNNSFTERHLVLVDDLGITLIRPVADGMERCNGVMAEPSHIYATV 180
           YTKPIFVAPAMNALMWNNSFTERHLVLVDDLGITLIRPVADGMERCNGVMAEPSHIYATV
Sbjct: 121 YTKPIFVAPAMNALMWNNSFTERHLVLVDDLGITLIRPVADGMERCNGVMAEPSHIYATV 180

Query: 181 VLFMELQRKKNKTAHQ 197
           VLFMELQRKKNKTAHQ
Sbjct: 181 VLFMELQRKKNKTAHQ 196

[Close]

BLAST of Cucsa.157520 vs. TrEMBL
Match: A0A022R063_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a013844mg PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 4.9e-72
Identity = 133/187 (71.12%), Postives = 156/187 (83.42%), Query Frame = 1


Query: 8   RKPRVLLAACGSVAALKFRTICQCFSEWADVRAVATRAALFFIDRQALPKNVFLYIDDDD 67
           RKPR+LLAA GSVAA+KF  +C CFSEWA+V+AVAT+A+L F+DR +LPK+V LY D+D+
Sbjct: 19  RKPRILLAASGSVAAIKFANLCHCFSEWAEVKAVATKASLHFVDRASLPKDVTLYTDEDE 78

Query: 68  WSSWKKIGDNVLHIHLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYTKPIFV 127
           WS+WKKIGD VLHI L  WADIMVIAPLSANTLGKIAGGLCDNLL+CI+RAWDYTKP+FV
Sbjct: 79  WSTWKKIGDGVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLSCIIRAWDYTKPMFV 138

Query: 128 APAMNALMWNNSFTERHLVLVDDLGITLIRPVADGM---ERCNGVMAEPSHIYATVVLFM 187
           APAMN LMWNN FTERHL+ +DDLGI+LI PV   +   +  NG MAEPS IY+TV LF 
Sbjct: 139 APAMNTLMWNNPFTERHLMAIDDLGISLIPPVKKRLACGDYGNGAMAEPSLIYSTVRLFF 198

Query: 188 ELQRKKN 192
           E + K N
Sbjct: 199 ETREKSN 205

[Close]

BLAST of Cucsa.157520 vs. TrEMBL
Match: A0A059A1H2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K01291 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.1e-71
Identity = 132/181 (72.93%), Postives = 154/181 (85.08%), Query Frame = 1


Query: 8   RKPRVLLAACGSVAALKFRTICQCFSEWADVRAVATRAALFFIDRQALPKNVFLYIDDDD 67
           RKPR+LLAA GSVAA+KF  +C CFSEWA+V+AVAT+A+L FIDR +LP++V LY D+D+
Sbjct: 21  RKPRILLAASGSVAAIKFANLCHCFSEWAEVKAVATKASLHFIDRASLPRDVVLYTDEDE 80

Query: 68  WSSWKKIGDNVLHIHLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYTKPIFV 127
           WSSW KIGD+VLHI L  WADIM+IAPLSANTLGKIAGGLCDNLLTCIVRAWDYTKP+FV
Sbjct: 81  WSSWSKIGDSVLHIELRRWADIMIIAPLSANTLGKIAGGLCDNLLTCIVRAWDYTKPLFV 140

Query: 128 APAMNALMWNNSFTERHLVLVDDLGITLIRPVADGM---ERCNGVMAEPSHIYATVVLFM 186
           APAMN  MWNN FTERHL+ VD+LGI+LI PV+  +   +  NG MAEPSHIY+TV LF 
Sbjct: 141 APAMNTFMWNNPFTERHLMTVDELGISLIPPVSKRLACGDYGNGAMAEPSHIYSTVRLFY 200

[Close]

BLAST of Cucsa.157520 vs. TrEMBL
Match: B9SJW3_RICCO (Phosphopentothenoylcysteine decarboxylase, putative OS=Ricinus communis GN=RCOM_0576840 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.4e-71
Identity = 133/188 (70.74%), Postives = 156/188 (82.98%), Query Frame = 1


Query: 1   MQVSNRQRKPRVLLAACGSVAALKFRTICQCFSEWADVRAVATRAALFFIDRQALPKNVF 60
           MQV+   RKPR+LLAA GSVAA+KF  +C CFSEWA+VRAVAT+A+L FIDR +LPK+V 
Sbjct: 14  MQVNASPRKPRILLAASGSVAAIKFGNLCHCFSEWAEVRAVATKASLHFIDRASLPKDVV 73

Query: 61  LYIDDDDWSSWKKIGDNVLHIHLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120
           LY D+D+WSSW KIGD+VLHI L  WADIMVIAPLSANTLGKIAGGLCDNLLTC+VRAWD
Sbjct: 74  LYTDEDEWSSWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCVVRAWD 133

Query: 121 YTKPIFVAPAMNALMWNNSFTERHLVLVDDLGITLIRPVADGM---ERCNGVMAEPSHIY 180
           Y KP+FVAPAMN  MWNN FTERHL+ +D+LGI+LI PV   +   +  NG MAEPS IY
Sbjct: 134 YNKPLFVAPAMNTFMWNNPFTERHLMSIDELGISLIPPVTKRLACGDYGNGAMAEPSLIY 193

Query: 181 ATVVLFME 186
           +T+ LF+E
Sbjct: 194 STIRLFLE 201

[Close]

BLAST of Cucsa.157520 vs. TrEMBL
Match: V7AQM2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G086000g PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 1.9e-71
Identity = 135/188 (71.81%), Postives = 153/188 (81.38%), Query Frame = 1


Query: 1   MQVSNRQRKPRVLLAACGSVAALKFRTICQCFSEWADVRAVATRAALFFIDRQALPKNVF 60
           M V    RKPR+LLAA GSVAA+KF  +C CFSEWADVRAVAT A+L FIDR ++PK+V 
Sbjct: 14  MAVDGAPRKPRILLAASGSVAAVKFANLCHCFSEWADVRAVATSASLHFIDRASMPKDVT 73

Query: 61  LYIDDDDWSSWKKIGDNVLHIHLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120
           LY DD++WSSW K+GDNVLHI L  WADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD
Sbjct: 74  LYTDDNEWSSWMKLGDNVLHIELRKWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 133

Query: 121 YTKPIFVAPAMNALMWNNSFTERHLVLVDDLGITLIRPVADGM---ERCNGVMAEPSHIY 180
           Y+KP FVAPAMN LMWNN FTERHL+ +D+LGI+LI PV   +   +  NG MAEPS IY
Sbjct: 134 YSKPFFVAPAMNTLMWNNPFTERHLISIDELGISLIPPVTKRLACGDYGNGAMAEPSTIY 193

Query: 181 ATVVLFME 186
           +TV LF E
Sbjct: 194 STVRLFYE 201

[Close]

BLAST of Cucsa.157520 vs. TAIR10
Match: AT1G48605.1 (AT1G48605.1 Flavoprotein)

HSP 1 Score: 273.9 bits (699), Expect = 7.9e-74
Identity = 130/195 (66.67%), Postives = 159/195 (81.54%), Query Frame = 1


Query: 1   MQVSNRQRKPRVLLAACGSVAALKFRTICQCFSEWADVRAVATRAALFFIDRQALPKNVF 60
           M+V    RKPR+LLAA GSVA++KF  +C CFSEWA+V+AVA++++L F+D+ +LP+NV 
Sbjct: 3   MEVDTVTRKPRILLAASGSVASIKFSNLCHCFSEWAEVKAVASKSSLNFVDKPSLPQNVT 62

Query: 61  LYIDDDDWSSWKKIGDNVLHIHLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120
           LY D+D+WSSW KIGD VLHI L  WAD+M+IAPLSANTL KIAGGLCDNLLTCIVRAWD
Sbjct: 63  LYTDEDEWSSWNKIGDPVLHIELRRWADVMIIAPLSANTLAKIAGGLCDNLLTCIVRAWD 122

Query: 121 YTKPIFVAPAMNALMWNNSFTERHLVLVDDLGITLIRPVADGM---ERCNGVMAEPSHIY 180
           Y+KP+FVAPAMN LMWNN FTERHLVL+D+LGITLI P+   +   +  NG MAEPS IY
Sbjct: 123 YSKPLFVAPAMNTLMWNNPFTERHLVLLDELGITLIPPIKKKLACGDYGNGAMAEPSLIY 182

Query: 181 ATVVLFMELQRKKNK 193
           +TV LF E Q +K +
Sbjct: 183 STVRLFWESQARKQR 197

[Close]

BLAST of Cucsa.157520 vs. TAIR10
Match: AT3G18030.1 (AT3G18030.1 HAL3-like protein A)

HSP 1 Score: 270.0 bits (689), Expect = 1.1e-72
Identity = 129/190 (67.89%), Postives = 155/190 (81.58%), Query Frame = 1


Query: 1   MQVSNRQRKPRVLLAACGSVAALKFRTICQCFSEWADVRAVATRAALFFIDRQALPKNVF 60
           M+V+   RKPRVLLAA GSVAA+KF  +C CF+EWA+VRAV T+++L F+D+ +LP+ V 
Sbjct: 11  MEVNTTPRKPRVLLAASGSVAAIKFGNLCHCFTEWAEVRAVVTKSSLHFLDKLSLPQEVT 70

Query: 61  LYIDDDDWSSWKKIGDNVLHIHLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120
           LY D+D+WSSW KIGD VLHI L  WAD++VIAPLSANTLGKIAGGLCDNLLTCI+RAWD
Sbjct: 71  LYTDEDEWSSWNKIGDPVLHIELRRWADVLVIAPLSANTLGKIAGGLCDNLLTCIIRAWD 130

Query: 121 YTKPIFVAPAMNALMWNNSFTERHLVLVDDLGITLIRPVADGM---ERCNGVMAEPSHIY 180
           YTKP+FVAPAMN LMWNN FTERHL+ +D+LGITLI P+   +   +  NG MAEPS IY
Sbjct: 131 YTKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPPIKKRLACGDYGNGAMAEPSLIY 190

Query: 181 ATVVLFMELQ 188
           +TV LF E Q
Sbjct: 191 STVRLFWESQ 200

[Close]

BLAST of Cucsa.157520 vs. NCBI nr
Match: gi|778655401|ref|XP_011652837.1| (PREDICTED: probable phosphopantothenoylcysteine decarboxylase [Cucumis sativus])

HSP 1 Score: 405.2 bits (1040), Expect = 6.5e-110
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 1


Query: 1   MQVSNRQRKPRVLLAACGSVAALKFRTICQCFSEWADVRAVATRAALFFIDRQALPKNVF 60
           MQVSNRQRKPRVLLAACGSVAALKFRTICQCFSEWADVRAVATRAALFFIDRQALPKNVF
Sbjct: 1   MQVSNRQRKPRVLLAACGSVAALKFRTICQCFSEWADVRAVATRAALFFIDRQALPKNVF 60

Query: 61  LYIDDDDWSSWKKIGDNVLHIHLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120
           LYIDDDDWSSWKKIGDNVLHIHLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD
Sbjct: 61  LYIDDDDWSSWKKIGDNVLHIHLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120

Query: 121 YTKPIFVAPAMNALMWNNSFTERHLVLVDDLGITLIRPVADGMERCNGVMAEPSHIYATV 180
           YTKPIFVAPAMNALMWNNSFTERHLVLVDDLGITLIRPVADGMERCNGVMAEPSHIYATV
Sbjct: 121 YTKPIFVAPAMNALMWNNSFTERHLVLVDDLGITLIRPVADGMERCNGVMAEPSHIYATV 180

Query: 181 VLFMELQRKKNKTAHQ 197
           VLFMELQRKKNKTAHQ
Sbjct: 181 VLFMELQRKKNKTAHQ 196

[Close]

BLAST of Cucsa.157520 vs. NCBI nr
Match: gi|659128948|ref|XP_008464452.1| (PREDICTED: probable phosphopantothenoylcysteine decarboxylase [Cucumis melo])

HSP 1 Score: 367.1 bits (941), Expect = 2.0e-98
Identity = 175/196 (89.29%), Postives = 187/196 (95.41%), Query Frame = 1


Query: 1   MQVSNRQRKPRVLLAACGSVAALKFRTICQCFSEWADVRAVATRAALFFIDRQALPKNVF 60
           MQV+N QR+PR+LLAACGSVAALKFRTICQCFSEWADVRAVATRAALFFIDRQ+LPKNVF
Sbjct: 1   MQVNNWQRRPRILLAACGSVAALKFRTICQCFSEWADVRAVATRAALFFIDRQSLPKNVF 60

Query: 61  LYIDDDDWSSWKKIGDNVLHIHLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120
           LY DDDDWSSW+KIGD  LHIHLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD
Sbjct: 61  LYNDDDDWSSWRKIGDECLHIHLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWD 120

Query: 121 YTKPIFVAPAMNALMWNNSFTERHLVLVDDLGITLIRPVADGMERCNGVMAEPSHIYATV 180
           Y KPIFVAPAMNALMW NSFTERHLV VDDLGITLIRPVA+ +E+CNGVMAEPSHI ATV
Sbjct: 121 YNKPIFVAPAMNALMWKNSFTERHLVSVDDLGITLIRPVANAVEQCNGVMAEPSHISATV 180

Query: 181 VLFMELQRKKNKTAHQ 197
           +LF+ELQRK+NKTA+Q
Sbjct: 181 ILFIELQRKRNKTANQ 196

[Close]

BLAST of Cucsa.157520 vs. NCBI nr
Match: gi|848884123|ref|XP_012842340.1| (PREDICTED: probable phosphopantothenoylcysteine decarboxylase [Erythranthe guttata])

HSP 1 Score: 278.9 bits (712), Expect = 7.0e-72
Identity = 133/187 (71.12%), Postives = 156/187 (83.42%), Query Frame = 1


Query: 8   RKPRVLLAACGSVAALKFRTICQCFSEWADVRAVATRAALFFIDRQALPKNVFLYIDDDD 67
           RKPR+LLAA GSVAA+KF  +C CFSEWA+V+AVAT+A+L F+DR +LPK+V LY D+D+
Sbjct: 19  RKPRILLAASGSVAAIKFANLCHCFSEWAEVKAVATKASLHFVDRASLPKDVTLYTDEDE 78

Query: 68  WSSWKKIGDNVLHIHLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYTKPIFV 127
           WS+WKKIGD VLHI L  WADIMVIAPLSANTLGKIAGGLCDNLL+CI+RAWDYTKP+FV
Sbjct: 79  WSTWKKIGDGVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLSCIIRAWDYTKPMFV 138

Query: 128 APAMNALMWNNSFTERHLVLVDDLGITLIRPVADGM---ERCNGVMAEPSHIYATVVLFM 187
           APAMN LMWNN FTERHL+ +DDLGI+LI PV   +   +  NG MAEPS IY+TV LF 
Sbjct: 139 APAMNTLMWNNPFTERHLMAIDDLGISLIPPVKKRLACGDYGNGAMAEPSLIYSTVRLFF 198

Query: 188 ELQRKKN 192
           E + K N
Sbjct: 199 ETREKSN 205

[Close]

BLAST of Cucsa.157520 vs. NCBI nr
Match: gi|702491679|ref|XP_010036009.1| (PREDICTED: probable phosphopantothenoylcysteine decarboxylase [Eucalyptus grandis])

HSP 1 Score: 277.7 bits (709), Expect = 1.6e-71
Identity = 132/181 (72.93%), Postives = 154/181 (85.08%), Query Frame = 1


Query: 8   RKPRVLLAACGSVAALKFRTICQCFSEWADVRAVATRAALFFIDRQALPKNVFLYIDDDD 67
           RKPR+LLAA GSVAA+KF  +C CFSEWA+V+AVAT+A+L FIDR +LP++V LY D+D+
Sbjct: 21  RKPRILLAASGSVAAIKFANLCHCFSEWAEVKAVATKASLHFIDRASLPRDVVLYTDEDE 80

Query: 68  WSSWKKIGDNVLHIHLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYTKPIFV 127
           WSSW KIGD+VLHI L  WADIM+IAPLSANTLGKIAGGLCDNLLTCIVRAWDYTKP+FV
Sbjct: 81  WSSWSKIGDSVLHIELRRWADIMIIAPLSANTLGKIAGGLCDNLLTCIVRAWDYTKPLFV 140

Query: 128 APAMNALMWNNSFTERHLVLVDDLGITLIRPVADGM---ERCNGVMAEPSHIYATVVLFM 186
           APAMN  MWNN FTERHL+ VD+LGI+LI PV+  +   +  NG MAEPSHIY+TV LF 
Sbjct: 141 APAMNTFMWNNPFTERHLMTVDELGISLIPPVSKRLACGDYGNGAMAEPSHIYSTVRLFY 200

[Close]

BLAST of Cucsa.157520 vs. NCBI nr
Match: gi|747046609|ref|XP_011100508.1| (PREDICTED: probable phosphopantothenoylcysteine decarboxylase [Sesamum indicum])

HSP 1 Score: 277.7 bits (709), Expect = 1.6e-71
Identity = 133/187 (71.12%), Postives = 156/187 (83.42%), Query Frame = 1


Query: 2   QVSNRQRKPRVLLAACGSVAALKFRTICQCFSEWADVRAVATRAALFFIDRQALPKNVFL 61
           QV+N  RKPR+LLAA GSVAA+KF  +C CFSEWA+V+AVAT+A+L F+DR ++PK+V L
Sbjct: 15  QVNNASRKPRILLAASGSVAAIKFANLCHCFSEWAEVKAVATKASLHFVDRVSVPKDVTL 74

Query: 62  YIDDDDWSSWKKIGDNVLHIHLCNWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDY 121
           Y D+D+WSSW KIGD+VLHI L  WADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDY
Sbjct: 75  YTDEDEWSSWNKIGDSVLHIELRKWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDY 134

Query: 122 TKPIFVAPAMNALMWNNSFTERHLVLVDDLGITLIRPVADGM---ERCNGVMAEPSHIYA 181
           TKP+FVAPAMN  MW N FTERHL+++DDLGI+LI PV   +   +  NG MAEPS IY+
Sbjct: 135 TKPMFVAPAMNTFMWTNPFTERHLMVIDDLGISLIPPVTKRLACGDYGNGAMAEPSLIYS 194

Query: 182 TVVLFME 186
           TV LF E
Sbjct: 195 TVRLFFE 201

The following BLAST results are available for this feature:

BLAST of Cucsa.157520 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HAL3B_ARATH	1.4e-72	66.67	Probable phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana GN=HA...	[more]
HAL3A_ARATH	2.0e-71	67.89	Phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana GN=HAL3A PE=1 ...	[more]
HAL3_ORYSJ	1.5e-66	68.13	Phosphopantothenoylcysteine decarboxylase OS=Oryza sativa subsp. japonica GN=HAL...	[more]
COAC_MOUSE	1.4e-32	43.17	Phosphopantothenoylcysteine decarboxylase OS=Mus musculus GN=Ppcdc PE=1 SV=1	[more]
COAC_HUMAN	5.1e-30	42.93	Phosphopantothenoylcysteine decarboxylase OS=Homo sapiens GN=PPCDC PE=1 SV=2	[more]

BLAST of Cucsa.157520 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LP03_CUCSA	4.5e-110	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G002720 PE=4 SV=1	[more]
A0A022R063_ERYGU	4.9e-72	71.12	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a013844mg PE=4 SV=1	[more]
A0A059A1H2_EUCGR	1.1e-71	72.93	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K01291 PE=4 SV=1	[more]
B9SJW3_RICCO	1.4e-71	70.74	Phosphopentothenoylcysteine decarboxylase, putative OS=Ricinus communis GN=RCOM_...	[more]
V7AQM2_PHAVU	1.9e-71	71.81	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G086000g PE=4 SV=1	[more]

BLAST of Cucsa.157520 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G48605.1	7.9e-74	66.67	Flavoprotein	[more]
AT3G18030.1	1.1e-72	67.89	HAL3-like protein A	[more]

BLAST of Cucsa.157520 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778655401\|ref\|XP_011652837.1\|	6.5e-110	100.00	PREDICTED: probable phosphopantothenoylcysteine decarboxylase [Cucumis sativus]	[more]
gi\|659128948\|ref\|XP_008464452.1\|	2.0e-98	89.29	PREDICTED: probable phosphopantothenoylcysteine decarboxylase [Cucumis melo]	[more]
gi\|848884123\|ref\|XP_012842340.1\|	7.0e-72	71.12	PREDICTED: probable phosphopantothenoylcysteine decarboxylase [Erythranthe gutta...	[more]
gi\|702491679\|ref\|XP_010036009.1\|	1.6e-71	72.93	PREDICTED: probable phosphopantothenoylcysteine decarboxylase [Eucalyptus grandi...	[more]
gi\|747046609\|ref\|XP_011100508.1\|	1.6e-71	71.12	PREDICTED: probable phosphopantothenoylcysteine decarboxylase [Sesamum indicum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003382	Flavoprotein

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015940	pantothenate biosynthetic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004633	phosphopantothenoylcysteine decarboxylase activity
molecular_function	GO:0003824	catalytic activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.157520.1	Cucsa.157520.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003382	Flavoprotein	GENE3D	G3DSA:3.40.50.1950		coord: 10..181 score: 8.3
IPR003382	Flavoprotein	PFAM	PF02441	Flavoprotein	coord: 11..141 score: 2.2
IPR003382	Flavoprotein	unknown	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	coord: 9..183 score: 8.37
None	No IPR available	PANTHER	PTHR14359	HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY	coord: 8..189 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.157520	Cla019257	Watermelon (97103) v1	cgywmB279
Cucsa.157520	Cla002583	Watermelon (97103) v1	cgywmB278
Cucsa.157520	Csa1G050090	Cucumber (Chinese Long) v2	cgycuB225
Cucsa.157520	Csa1G002720	Cucumber (Chinese Long) v2	cgycuB224
Cucsa.157520	MELO3C002329	Melon (DHL92) v3.5.1	cgymeB262
Cucsa.157520	MELO3C026216	Melon (DHL92) v3.5.1	cgymeB263
Cucsa.157520	ClCG06G017690	Watermelon (Charleston Gray)	cgywcgB263
Cucsa.157520	ClCG03G003440	Watermelon (Charleston Gray)	cgywcgB262
Cucsa.157520	CSPI01G00730	Wild cucumber (PI 183967)	cgycpiB229
Cucsa.157520	CSPI01G09150	Wild cucumber (PI 183967)	cgycpiB230
Cucsa.157520	CmaCh10G000760	Cucurbita maxima (Rimu)	cgycmaB0433
Cucsa.157520	CmaCh11G000510	Cucurbita maxima (Rimu)	cgycmaB0434
Cucsa.157520	CmaCh13G007770	Cucurbita maxima (Rimu)	cgycmaB0435
Cucsa.157520	CmoCh18G001870	Cucurbita moschata (Rifu)	cgycmoB0435
Cucsa.157520	CmoCh13G008090	Cucurbita moschata (Rifu)	cgycmoB0434
Cucsa.157520	CmoCh11G000530	Cucurbita moschata (Rifu)	cgycmoB0433
Cucsa.157520	CmoCh10G000750	Cucurbita moschata (Rifu)	cgycmoB0432
Cucsa.157520	Lsi06G016190	Bottle gourd (USVL1VR-Ls)	cgylsiB250
Cucsa.157520	Lsi02G004680	Bottle gourd (USVL1VR-Ls)	cgylsiB249
Cucsa.157520	Cp4.1LG18g08890	Cucurbita pepo (Zucchini)	cgycpeB0420
Cucsa.157520	Cp4.1LG04g15960	Cucurbita pepo (Zucchini)	cgycpeB0422
Cucsa.157520	MELO3C026216.2	Melon (DHL92) v3.6.1	cgymedB262
Cucsa.157520	MELO3C002329.2	Melon (DHL92) v3.6.1	cgymedB261
Cucsa.157520	CsaV3_1G009240	Cucumber (Chinese Long) v3	cgycucB237
Cucsa.157520	CsaV3_1G000770	Cucumber (Chinese Long) v3	cgycucB236
Cucsa.157520	Cla97C06G127390	Watermelon (97103) v2	cgywmbB264
Cucsa.157520	Cla97C03G054520	Watermelon (97103) v2	cgywmbB263
Cucsa.157520	Bhi02G000414	Wax gourd	cgywgoB305
Cucsa.157520	Carg20183	Silver-seed gourd	carcgyB1161
Cucsa.157520	Carg07574	Silver-seed gourd	carcgyB1122
Cucsa.157520	Carg10298	Silver-seed gourd	carcgyB0422

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None