CsaV3_1G009240 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTATCCAAAATCTGCTAATGCAGAACGGGAGGTAATGCAAGTTAATAATGTTCAGAGGAAACCAAGGATTTTACTTGCTGCCAGTGGAAGTGTAGCTTCGATTAAATTTGGGAATCTCTACCATTCTTTTGCTGAATGGGCAGACGTTAGAGCAGTGGCTACTAGGGCCTCTTTACACTTCATCGATCGAGCATCTCTTCCTAAGGATGCTGTTCTTTACACCGATGAGGATGAGTGGACTGGTTGGAACAAAATTGGAGACAGTGTTCTTCATATTGAGCTTCGCCGGTGGGCCGATATCATGGTTATTGCCCCTTTATCTGCAAACACGCTCGGCAAGGTACAGTATTTTGACCAATGTTTAATTCTGATCTCATTCTTCAATATATTTCAAGATGGGGATGAATGTTACTCACACTTAGCACACAAAATATGGAATGTGGCTTCTCCCCAAGATTAGGTTGGTCCAGAAGTCTATCGTCTTTGTGATTATCTGAATTGGTTTATGGTTTGTTTCTTTGTTTTGTCAGTTCCATCTTGGTTTAAGATGTGTTGATGTCCAGCCTGTTTGTGTACATTTTTTAATGCTGCTTAGTAACTGTTATTATGTGTATAGATACGCATCCATCTATATTGGATTTGGCTCACGTGATCCATTATGACTGGTACCATATGTCTTTAGGAATTATTTTGCTGCTTTTCATGAAGCTTCTTCAGCTCAAGGCTCTAATCACTGAAGAATGTAGAGTCCTTAAAATATTTTGATCAATGGATTCTATTCCTATCGTTTGTTGCTTGCCTATTGCTTTACGTTTTTGTTAAATAATATAATATTAAATTTACCTTCAACCTTCTCCTCATGTTTTTGGGTTAGTCGGTGATTTGAGATGGTATTAGACCAACTAGTTTAAAAGCTATGTGTTCAAACTTCTGCAGTGTTATATACTCTCCAATTCATATTGATATAATAATAAATCCTCTTGTCTACATATTATACATTATACTTGAGTGAGTCAGGAACCCTTTTTTTCTTATTTTGTTCTGTATCTTTTCATGGTAGCTTCTATCTGGATTTGTGAATACTTTTCGAGACATAACATTGCTACCTTAAAAAAAAATTCCTCTTGAACTTGATCCTATCACTTGCATTTTTTTCCTCCAGATTGCTGGTGGATTATGCGACAATCTATTGACTTGCGTTGTGCGAGCATGGGACTATAACAAACCACTCTTTGTTGCGCCTGCAATGAATACCTTTATGTGGACCAACCCTTTCACTGAGCGGCATCTCATTGCAATCGATGAACTTGGGATAACTCTTATACCACCTGTTACGAAGAGGCTGGCTTGTGGGGACTATGGCAATGGTGCAATGGCTGAACCTTCCTTAATCTTCTCTACTGTGAGACTCTTCTATGAGTCACGAATGCAACAAAGTGCCAAAAATGGTGAGTAG ATGGCGTATCCAAAATCTGCTAATGCAGAACGGGAGGTAATGCAAGTTAATAATGTTCAGAGGAAACCAAGGATTTTACTTGCTGCCAGTGGAAGTGTAGCTTCGATTAAATTTGGGAATCTCTACCATTCTTTTGCTGAATGGGCAGACGTTAGAGCAGTGGCTACTAGGGCCTCTTTACACTTCATCGATCGAGCATCTCTTCCTAAGGATGCTGTTCTTTACACCGATGAGGATGAGTGGACTGGTTGGAACAAAATTGGAGACAGTGTTCTTCATATTGAGCTTCGCCGGTGGGCCGATATCATGGTTATTGCCCCTTTATCTGCAAACACGCTCGGCAAGATTGCTGGTGGATTATGCGACAATCTATTGACTTGCGTTGTGCGAGCATGGGACTATAACAAACCACTCTTTGTTGCGCCTGCAATGAATACCTTTATGTGGACCAACCCTTTCACTGAGCGGCATCTCATTGCAATCGATGAACTTGGGATAACTCTTATACCACCTGTTACGAAGAGGCTGGCTTGTGGGGACTATGGCAATGGTGCAATGGCTGAACCTTCCTTAATCTTCTCTACTGTGAGACTCTTCTATGAGTCACGAATGCAACAAAGTGCCAAAAATGGTGAGTAG ATGGCGTATCCAAAATCTGCTAATGCAGAACGGGAGGTAATGCAAGTTAATAATGTTCAGAGGAAACCAAGGATTTTACTTGCTGCCAGTGGAAGTGTAGCTTCGATTAAATTTGGGAATCTCTACCATTCTTTTGCTGAATGGGCAGACGTTAGAGCAGTGGCTACTAGGGCCTCTTTACACTTCATCGATCGAGCATCTCTTCCTAAGGATGCTGTTCTTTACACCGATGAGGATGAGTGGACTGGTTGGAACAAAATTGGAGACAGTGTTCTTCATATTGAGCTTCGCCGGTGGGCCGATATCATGGTTATTGCCCCTTTATCTGCAAACACGCTCGGCAAGATTGCTGGTGGATTATGCGACAATCTATTGACTTGCGTTGTGCGAGCATGGGACTATAACAAACCACTCTTTGTTGCGCCTGCAATGAATACCTTTATGTGGACCAACCCTTTCACTGAGCGGCATCTCATTGCAATCGATGAACTTGGGATAACTCTTATACCACCTGTTACGAAGAGGCTGGCTTGTGGGGACTATGGCAATGGTGCAATGGCTGAACCTTCCTTAATCTTCTCTACTGTGAGACTCTTCTATGAGTCACGAATGCAACAAAGTGCCAAAAATGGTGAGTAG MAYPKSANAEREVMQVNNVQRKPRILLAASGSVASIKFGNLYHSFAEWADVRAVATRASLHFIDRASLPKDAVLYTDEDEWTGWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCVVRAWDYNKPLFVAPAMNTFMWTNPFTERHLIAIDELGITLIPPVTKRLACGDYGNGAMAEPSLIFSTVRLFYESRMQQSAKNGE
BLAST of CsaV3_1G009240 vs. NCBI nr
Match: XP_004152508.1 (PREDICTED: probable phosphopantothenoylcysteine decarboxylase [Cucumis sativus] >XP_008439274.1 PREDICTED: probable phosphopantothenoylcysteine decarboxylase [Cucumis melo] >ADN33971.1 phosphopentothenoylcysteine decarboxylase [Cucumis melo subsp. melo] >KGN64370.1 hypothetical protein Csa_1G050090 [Cucumis sativus]) HSP 1 Score: 438.3 bits (1126), Expect = 1.4e-119 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of CsaV3_1G009240 vs. NCBI nr
Match: XP_022923809.1 (probable phosphopantothenoylcysteine decarboxylase [Cucurbita moschata] >XP_022923810.1 probable phosphopantothenoylcysteine decarboxylase [Cucurbita moschata] >XP_022923811.1 probable phosphopantothenoylcysteine decarboxylase [Cucurbita moschata] >XP_023001532.1 probable phosphopantothenoylcysteine decarboxylase [Cucurbita maxima] >XP_023001533.1 probable phosphopantothenoylcysteine decarboxylase [Cucurbita maxima] >XP_023001534.1 probable phosphopantothenoylcysteine decarboxylase [Cucurbita maxima] >XP_023520156.1 probable phosphopantothenoylcysteine decarboxylase [Cucurbita pepo subsp. pepo] >XP_023520157.1 probable phosphopantothenoylcysteine decarboxylase [Cucurbita pepo subsp. pepo]) HSP 1 Score: 421.8 bits (1083), Expect = 1.4e-114 Identity = 202/212 (95.28%), Postives = 207/212 (97.64%), Query Frame = 0
BLAST of CsaV3_1G009240 vs. NCBI nr
Match: XP_023542771.1 (probable phosphopantothenoylcysteine decarboxylase [Cucurbita pepo subsp. pepo]) HSP 1 Score: 419.1 bits (1076), Expect = 9.1e-114 Identity = 200/212 (94.34%), Postives = 207/212 (97.64%), Query Frame = 0
BLAST of CsaV3_1G009240 vs. NCBI nr
Match: XP_022137667.1 (probable phosphopantothenoylcysteine decarboxylase [Momordica charantia] >XP_022137668.1 probable phosphopantothenoylcysteine decarboxylase [Momordica charantia] >XP_022137670.1 probable phosphopantothenoylcysteine decarboxylase [Momordica charantia] >XP_022137671.1 probable phosphopantothenoylcysteine decarboxylase [Momordica charantia] >XP_022137672.1 probable phosphopantothenoylcysteine decarboxylase [Momordica charantia] >XP_022137673.1 probable phosphopantothenoylcysteine decarboxylase [Momordica charantia]) HSP 1 Score: 417.2 bits (1071), Expect = 3.5e-113 Identity = 199/212 (93.87%), Postives = 207/212 (97.64%), Query Frame = 0
BLAST of CsaV3_1G009240 vs. NCBI nr
Match: XP_022994166.1 (probable phosphopantothenoylcysteine decarboxylase [Cucurbita maxima] >XP_022994167.1 probable phosphopantothenoylcysteine decarboxylase [Cucurbita maxima]) HSP 1 Score: 416.4 bits (1069), Expect = 5.9e-113 Identity = 198/212 (93.40%), Postives = 205/212 (96.70%), Query Frame = 0
BLAST of CsaV3_1G009240 vs. TAIR10
Match: AT3G18030.1 (HAL3-like protein A) HSP 1 Score: 343.6 bits (880), Expect = 8.8e-95 Identity = 154/202 (76.24%), Postives = 180/202 (89.11%), Query Frame = 0
BLAST of CsaV3_1G009240 vs. TAIR10
Match: AT1G48605.1 (Flavoprotein) HSP 1 Score: 333.2 bits (853), Expect = 1.2e-91 Identity = 150/193 (77.72%), Postives = 177/193 (91.71%), Query Frame = 0
BLAST of CsaV3_1G009240 vs. Swiss-Prot
Match: sp|Q9SWE5|HAL3A_ARATH (Phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana OX=3702 GN=HAL3A PE=1 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 1.6e-93 Identity = 154/202 (76.24%), Postives = 180/202 (89.11%), Query Frame = 0
BLAST of CsaV3_1G009240 vs. Swiss-Prot
Match: sp|P94063|HAL3B_ARATH (Probable phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana OX=3702 GN=HAL3B PE=2 SV=2) HSP 1 Score: 333.2 bits (853), Expect = 2.1e-90 Identity = 150/193 (77.72%), Postives = 177/193 (91.71%), Query Frame = 0
BLAST of CsaV3_1G009240 vs. Swiss-Prot
Match: sp|Q69K55|HAL3_ORYSJ (Phosphopantothenoylcysteine decarboxylase OS=Oryza sativa subsp. japonica OX=39947 GN=HAL3 PE=1 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 1.9e-83 Identity = 143/177 (80.79%), Postives = 161/177 (90.96%), Query Frame = 0
BLAST of CsaV3_1G009240 vs. Swiss-Prot
Match: sp|Q8BZB2|COAC_MOUSE (Phosphopantothenoylcysteine decarboxylase OS=Mus musculus OX=10090 GN=Ppcdc PE=1 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 5.5e-46 Identity = 93/196 (47.45%), Postives = 122/196 (62.24%), Query Frame = 0
BLAST of CsaV3_1G009240 vs. Swiss-Prot
Match: sp|Q96CD2|COAC_HUMAN (Phosphopantothenoylcysteine decarboxylase OS=Homo sapiens OX=9606 GN=PPCDC PE=1 SV=2) HSP 1 Score: 181.0 bits (458), Expect = 1.4e-44 Identity = 91/193 (47.15%), Postives = 118/193 (61.14%), Query Frame = 0
BLAST of CsaV3_1G009240 vs. TrEMBL
Match: tr|A0A1S3AZ24|A0A1S3AZ24_CUCME (probable phosphopantothenoylcysteine decarboxylase OS=Cucumis melo OX=3656 GN=LOC103484104 PE=4 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 9.6e-120 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of CsaV3_1G009240 vs. TrEMBL
Match: tr|E5GBX2|E5GBX2_CUCME (Phosphopentothenoylcysteine decarboxylase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 9.6e-120 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of CsaV3_1G009240 vs. TrEMBL
Match: tr|A0A0A0LR29|A0A0A0LR29_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050090 PE=4 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 9.6e-120 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of CsaV3_1G009240 vs. TrEMBL
Match: tr|B9SJW3|B9SJW3_RICCO (Phosphopentothenoylcysteine decarboxylase, putative OS=Ricinus communis OX=3988 GN=RCOM_0576840 PE=4 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 9.0e-102 Identity = 181/205 (88.29%), Postives = 192/205 (93.66%), Query Frame = 0
BLAST of CsaV3_1G009240 vs. TrEMBL
Match: tr|A0A2R6PUM2|A0A2R6PUM2_ACTCH (Phosphopantothenoylcysteine decarboxylase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc26802 PE=4 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 1.7e-100 Identity = 178/210 (84.76%), Postives = 189/210 (90.00%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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