Csa1G050090 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G050090
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPhosphopantothenoylcysteine decarboxylase; contains IPR003382 (Flavoprotein)
LocationChr1 : 5733531 .. 5734991 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTATCCAAAATCTGCTAATGCAGAACGGGAGGTAATGCAAGTTAATAATGTTCAGAGGAAACCAAGGATTTTACTTGCTGCCAGTGGAAGTGTAGCTTCGATTAAATTTGGGAATCTCTACCATTCTTTTGCTGAATGGGCAGACGTTAGAGCAGTGGCTACTAGGGCCTCTTTACACTTCATCGATCGAGCATCTCTTCCTAAGGATGCTGTTCTTTACACCGATGAGGATGAGTGGACTGGTTGGAACAAAATTGGAGACAGTGTTCTTCATATTGAGCTTCGCCGGTGGGCCGATATCATGGTTATTGCCCCTTTATCTGCAAACACGCTCGGCAAGGTACAGTATTTTGACCAATGTTTAATTCTGATCTCATTCTTCAATATATTTCAAGATGGGGATGAATGTTACTCACACTTAGCACACAAAATATGGAATGTGGCTTCTCCCCAAGATTAGGTTGGTCCAGAAGTCTATCGTCTTTGTGATTATCTGAATTGGTTTATGGTTTGTTTCTTTGTTTTGTCAGTTCCATCTTGGTTTAAGATGTGTTGATGTCCAGCCTGTTTGTGTACATTTTTTAATGCTGCTTAGTAACTGTTATTATGTGTATAGATACGCATCCATCTATATTGGATTTGGCTCACGTGATCCATTATGACTGGTACCATATGTCTTTAGGAATTATTTTGCTGCTTTTCATGAAGCTTCTTCAGCTCAAGGCTCTAATCACTGAAGAATGTAGAGTCCTTAAAATATTTTGATCAATGGATTCTATTCCTATCGTTTGTTGCTTGCCTATTGCTTTACGTTTTTGTTAAATAATATAATATTAAATTTACCTTCAACCTTCTCCTCATGTTTTTGGGTTAGTCGGTGATTTGAGATGGTATTAGACCAACTAGTTTAAAAGCTATGTGTTCAAACTTCTGCAGTGTTATATACTCTCCAATTCATATTGATATAATAATAAATCCTCTTGTCTACATATTATACATTATACTTGAGTGAGTCAGGAACCCTTTTTTTCTTATTTTGTTCTGTATCTTTTCATGGTAGCTTCTATCTGGATTTGTGAATACTTTTCGAGACATAACATTGCTACCTTAAAAAAAAATTCCTCTTGAACTTGATCCTATCACTTGCATTTTTTTCCTCCAGATTGCTGGTGGATTATGCGACAATCTATTGACTTGCGTTGTGCGAGCATGGGACTATAACAAACCACTCTTTGTTGCGCCTGCAATGAATACCTTTATGTGGACCAACCCTTTCACTGAGCGGCATCTCATTGCAATCGATGAACTTGGGATAACTCTTATACCACCTGTTACGAAGAGGCTGGCTTGTGGGGACTATGGCAATGGTGCAATGGCTGAACCTTCCTTAATCTTCTCTACTGTGAGACTCTTCTATGAGTCACGAATGCAACAAAGTGCCAAAAATGGTGAGTAG

mRNA sequence

ATGGCGTATCCAAAATCTGCTAATGCAGAACGGGAGGTAATGCAAGTTAATAATGTTCAGAGGAAACCAAGGATTTTACTTGCTGCCAGTGGAAGTGTAGCTTCGATTAAATTTGGGAATCTCTACCATTCTTTTGCTGAATGGGCAGACGTTAGAGCAGTGGCTACTAGGGCCTCTTTACACTTCATCGATCGAGCATCTCTTCCTAAGGATGCTGTTCTTTACACCGATGAGGATGAGTGGACTGGTTGGAACAAAATTGGAGACAGTGTTCTTCATATTGAGCTTCGCCGGTGGGCCGATATCATGGTTATTGCCCCTTTATCTGCAAACACGCTCGGCAAGATTGCTGGTGGATTATGCGACAATCTATTGACTTGCGTTGTGCGAGCATGGGACTATAACAAACCACTCTTTGTTGCGCCTGCAATGAATACCTTTATGTGGACCAACCCTTTCACTGAGCGGCATCTCATTGCAATCGATGAACTTGGGATAACTCTTATACCACCTGTTACGAAGAGGCTGGCTTGTGGGGACTATGGCAATGGTGCAATGGCTGAACCTTCCTTAATCTTCTCTACTGTGAGACTCTTCTATGAGTCACGAATGCAACAAAGTGCCAAAAATGGTGAGTAG

Coding sequence (CDS)

ATGGCGTATCCAAAATCTGCTAATGCAGAACGGGAGGTAATGCAAGTTAATAATGTTCAGAGGAAACCAAGGATTTTACTTGCTGCCAGTGGAAGTGTAGCTTCGATTAAATTTGGGAATCTCTACCATTCTTTTGCTGAATGGGCAGACGTTAGAGCAGTGGCTACTAGGGCCTCTTTACACTTCATCGATCGAGCATCTCTTCCTAAGGATGCTGTTCTTTACACCGATGAGGATGAGTGGACTGGTTGGAACAAAATTGGAGACAGTGTTCTTCATATTGAGCTTCGCCGGTGGGCCGATATCATGGTTATTGCCCCTTTATCTGCAAACACGCTCGGCAAGATTGCTGGTGGATTATGCGACAATCTATTGACTTGCGTTGTGCGAGCATGGGACTATAACAAACCACTCTTTGTTGCGCCTGCAATGAATACCTTTATGTGGACCAACCCTTTCACTGAGCGGCATCTCATTGCAATCGATGAACTTGGGATAACTCTTATACCACCTGTTACGAAGAGGCTGGCTTGTGGGGACTATGGCAATGGTGCAATGGCTGAACCTTCCTTAATCTTCTCTACTGTGAGACTCTTCTATGAGTCACGAATGCAACAAAGTGCCAAAAATGGTGAGTAG

Protein sequence

MAYPKSANAEREVMQVNNVQRKPRILLAASGSVASIKFGNLYHSFAEWADVRAVATRASLHFIDRASLPKDAVLYTDEDEWTGWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCVVRAWDYNKPLFVAPAMNTFMWTNPFTERHLIAIDELGITLIPPVTKRLACGDYGNGAMAEPSLIFSTVRLFYESRMQQSAKNGE*
Homology
[Close]
BLAST of Csa1G050090 vs. Swiss-Prot
Match: HAL3A_ARATH (Phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana GN=HAL3A PE=1 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 6.6e-92
Identity = 154/202 (76.24%), Postives = 178/202 (88.12%), Query Frame = 1 

Query: 5   KSANAEREVMQVNNVQRKPRILLAASGSVASIKFGNLYHSFAEWADVRAVATRASLHFID 64
           ++   +R+ M+VN   RKPR+LLAASGSVA+IKFGNL H F EWA+VRAV T++SLHF+D
Sbjct: 2   ENGKRDRQDMEVNTTPRKPRVLLAASGSVAAIKFGNLCHCFTEWAEVRAVVTKSSLHFLD 61

Query: 65  RASLPKDAVLYTDEDEWTGWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNL 124
           + SLP++  LYTDEDEW+ WNKIGD VLHIELRRWAD++VIAPLSANTLGKIAGGLCDNL
Sbjct: 62  KLSLPQEVTLYTDEDEWSSWNKIGDPVLHIELRRWADVLVIAPLSANTLGKIAGGLCDNL 121

Query: 125 LTCVVRAWDYNKPLFVAPAMNTFMWTNPFTERHLIAIDELGITLIPPVTKRLACGDYGNG 184
           LTC++RAWDY KPLFVAPAMNT MW NPFTERHL+++DELGITLIPP+ KRLACGDYGNG
Sbjct: 122 LTCIIRAWDYTKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPPIKKRLACGDYGNG 181

Query: 185 AMAEPSLIFSTVRLFYESRMQQ 207
           AMAEPSLI+STVRLF+ES+  Q
Sbjct: 182 AMAEPSLIYSTVRLFWESQAHQ 203

[Close]
BLAST of Csa1G050090 vs. Swiss-Prot
Match: HAL3B_ARATH (Probable phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana GN=HAL3B PE=2 SV=2)

HSP 1 Score: 327.4 bits (838), Expect = 1.2e-88
Identity = 150/193 (77.72%), Postives = 175/193 (90.67%), Query Frame = 1 

Query: 14  MQVNNVQRKPRILLAASGSVASIKFGNLYHSFAEWADVRAVATRASLHFIDRASLPKDAV 73
           M+V+ V RKPRILLAASGSVASIKF NL H F+EWA+V+AVA+++SL+F+D+ SLP++  
Sbjct: 3   MEVDTVTRKPRILLAASGSVASIKFSNLCHCFSEWAEVKAVASKSSLNFVDKPSLPQNVT 62

Query: 74  LYTDEDEWTGWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCVVRAWD 133
           LYTDEDEW+ WNKIGD VLHIELRRWAD+M+IAPLSANTL KIAGGLCDNLLTC+VRAWD
Sbjct: 63  LYTDEDEWSSWNKIGDPVLHIELRRWADVMIIAPLSANTLAKIAGGLCDNLLTCIVRAWD 122

Query: 134 YNKPLFVAPAMNTFMWTNPFTERHLIAIDELGITLIPPVTKRLACGDYGNGAMAEPSLIF 193
           Y+KPLFVAPAMNT MW NPFTERHL+ +DELGITLIPP+ K+LACGDYGNGAMAEPSLI+
Sbjct: 123 YSKPLFVAPAMNTLMWNNPFTERHLVLLDELGITLIPPIKKKLACGDYGNGAMAEPSLIY 182

Query: 194 STVRLFYESRMQQ 207
           STVRLF+ES+ ++
Sbjct: 183 STVRLFWESQARK 195

[Close]
BLAST of Csa1G050090 vs. Swiss-Prot
Match: HAL3_ORYSJ (Phosphopantothenoylcysteine decarboxylase OS=Oryza sativa subsp. japonica GN=HAL3 PE=1 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 1.4e-81
Identity = 143/177 (80.79%), Postives = 159/177 (89.83%), Query Frame = 1 

Query: 22  KPRILLAASGSVASIKFGNLYHSFAEWADVRAVATRASLHFIDRASLPKDAVLYTDEDEW 81
           KPR+LLAASGSVA+IKF +L  SF+EWA+VRAVAT+ASLHFIDR SLP + +LYTD+DEW
Sbjct: 20  KPRVLLAASGSVAAIKFESLCRSFSEWAEVRAVATKASLHFIDRTSLPSNIILYTDDDEW 79

Query: 82  TGWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCVVRAWDYNKPLFVA 141
           + W KIGD VLHIELR+WADIMVIAPLSANTL KIAGGLCDNLLTC+VRAWDY+KPLFVA
Sbjct: 80  STWKKIGDEVLHIELRKWADIMVIAPLSANTLAKIAGGLCDNLLTCIVRAWDYSKPLFVA 139

Query: 142 PAMNTFMWTNPFTERHLIAIDELGITLIPPVTKRLACGDYGNGAMAEPSLIFSTVRL 199
           PAMNTFMW NPFT RHL  I+ LGI+L+PP+TKRLACGDYGNGAMAEPS+I STVRL
Sbjct: 140 PAMNTFMWNNPFTSRHLETINLLGISLVPPITKRLACGDYGNGAMAEPSVIDSTVRL 196

[Close]
BLAST of Csa1G050090 vs. Swiss-Prot
Match: COAC_MOUSE (Phosphopantothenoylcysteine decarboxylase OS=Mus musculus GN=Ppcdc PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.9e-44
Identity = 93/196 (47.45%), Postives = 120/196 (61.22%), Query Frame = 1 

Query: 16  VNNVQRKPRILLAASGSVASIKFGNLYHSFAE--WADVRAVATRASLHFIDRASLPKDAV 75
           V + +RK R+L+  +GSVA++K   L     +    +V  V T  + HF     +P    
Sbjct: 11  VPSEERKFRVLVGVTGSVAALKLPLLVSKLLDVPGLEVTVVTTERAKHFYSPQDVP--VT 70

Query: 76  LYTDEDEWTGWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCVVRAWD 135
           LY+D DEW  W +  D VLHI+LRRWAD+M++APL ANTLGK+A G+CDNLLTCV+RAWD
Sbjct: 71  LYSDADEWEMWKRRSDPVLHIDLRRWADLMLVAPLDANTLGKVASGICDNLLTCVIRAWD 130

Query: 136 YNKPLFVAPAMNTFMWTNPFTERHLIAIDELGITLIPPVTKRLACGDYGNGAMAEPSLIF 195
            NKPL   PAMNT MW +P T + +  +   G   IP V+K+L CGD G GAMAE   I 
Sbjct: 131 LNKPLLFCPAMNTAMWEHPLTAQQVAQLKAFGYVEIPCVSKKLVCGDQGLGAMAEVETIV 190

Query: 196 STVR--LFYESRMQQS 208
           + V+  L     +QQS
Sbjct: 191 AKVQAVLSQHGSIQQS 204

[Close]
BLAST of Csa1G050090 vs. Swiss-Prot
Match: COAC_HUMAN (Phosphopantothenoylcysteine decarboxylase OS=Homo sapiens GN=PPCDC PE=1 SV=2)

HSP 1 Score: 174.9 bits (442), Expect = 9.6e-43
Identity = 91/193 (47.15%), Postives = 116/193 (60.10%), Query Frame = 1 

Query: 19  VQRKPRILLAASGSVASIKFGNLYHSFAE--WADVRAVATRASLHFIDRASLPKDAVLYT 78
           ++RK  +L+  +GSVA++K   L     +    +V  V T  + HF     +P    LY+
Sbjct: 14  MERKFHVLVGVTGSVAALKLPLLVSKLLDIPGLEVAVVTTERAKHFYSPQDIP--VTLYS 73

Query: 79  DEDEWTGWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCVVRAWDYNK 138
           D DEW  W    D VLHI+LRRWAD++++APL ANTLGK+A G+CDNLLTCV+RAWD +K
Sbjct: 74  DADEWEIWKSRSDPVLHIDLRRWADLLLVAPLDANTLGKVASGICDNLLTCVMRAWDRSK 133

Query: 139 PLFVAPAMNTFMWTNPFTERHLIAIDELGITLIPPVTKRLACGDYGNGAMAEPSLIFSTV 198
           PL   PAMNT MW +P T + +  +   G   IP V K+L CGD G GAMAE   I   V
Sbjct: 134 PLLFCPAMNTAMWEHPITAQQVDQLKAFGYVEIPCVAKKLVCGDEGLGAMAEVGTIVDKV 193

Query: 199 R--LFYESRMQQS 208
           +  LF  S  QQS
Sbjct: 194 KEVLFQHSGFQQS 204

[Close]
BLAST of Csa1G050090 vs. TrEMBL
Match: E5GBX2_CUCME (Phosphopentothenoylcysteine decarboxylase OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 3.7e-118
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 1 

Query: 1   MAYPKSANAEREVMQVNNVQRKPRILLAASGSVASIKFGNLYHSFAEWADVRAVATRASL 60
           MAYPKSANAEREVMQVNNVQRKPRILLAASGSVASIKFGNLYHSFAEWADVRAVATRASL
Sbjct: 1   MAYPKSANAEREVMQVNNVQRKPRILLAASGSVASIKFGNLYHSFAEWADVRAVATRASL 60

Query: 61  HFIDRASLPKDAVLYTDEDEWTGWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGL 120
           HFIDRASLPKDAVLYTDEDEWTGWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGL
Sbjct: 61  HFIDRASLPKDAVLYTDEDEWTGWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGL 120

Query: 121 CDNLLTCVVRAWDYNKPLFVAPAMNTFMWTNPFTERHLIAIDELGITLIPPVTKRLACGD 180
           CDNLLTCVVRAWDYNKPLFVAPAMNTFMWTNPFTERHLIAIDELGITLIPPVTKRLACGD
Sbjct: 121 CDNLLTCVVRAWDYNKPLFVAPAMNTFMWTNPFTERHLIAIDELGITLIPPVTKRLACGD 180

Query: 181 YGNGAMAEPSLIFSTVRLFYESRMQQSAKNGE 213
           YGNGAMAEPSLIFSTVRLFYESRMQQSAKNGE
Sbjct: 181 YGNGAMAEPSLIFSTVRLFYESRMQQSAKNGE 212

[Close]
BLAST of Csa1G050090 vs. TrEMBL
Match: A0A0A0LR29_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050090 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 3.7e-118
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 1 

Query: 1   MAYPKSANAEREVMQVNNVQRKPRILLAASGSVASIKFGNLYHSFAEWADVRAVATRASL 60
           MAYPKSANAEREVMQVNNVQRKPRILLAASGSVASIKFGNLYHSFAEWADVRAVATRASL
Sbjct: 1   MAYPKSANAEREVMQVNNVQRKPRILLAASGSVASIKFGNLYHSFAEWADVRAVATRASL 60

Query: 61  HFIDRASLPKDAVLYTDEDEWTGWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGL 120
           HFIDRASLPKDAVLYTDEDEWTGWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGL
Sbjct: 61  HFIDRASLPKDAVLYTDEDEWTGWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGL 120

Query: 121 CDNLLTCVVRAWDYNKPLFVAPAMNTFMWTNPFTERHLIAIDELGITLIPPVTKRLACGD 180
           CDNLLTCVVRAWDYNKPLFVAPAMNTFMWTNPFTERHLIAIDELGITLIPPVTKRLACGD
Sbjct: 121 CDNLLTCVVRAWDYNKPLFVAPAMNTFMWTNPFTERHLIAIDELGITLIPPVTKRLACGD 180

Query: 181 YGNGAMAEPSLIFSTVRLFYESRMQQSAKNGE 213
           YGNGAMAEPSLIFSTVRLFYESRMQQSAKNGE
Sbjct: 181 YGNGAMAEPSLIFSTVRLFYESRMQQSAKNGE 212

[Close]
BLAST of Csa1G050090 vs. TrEMBL
Match: B9SJW3_RICCO (Phosphopentothenoylcysteine decarboxylase, putative OS=Ricinus communis GN=RCOM_0576840 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 2.7e-100
Identity = 181/205 (88.29%), Postives = 192/205 (93.66%), Query Frame = 1 

Query: 1   MAYPKSANAEREVMQVNNVQRKPRILLAASGSVASIKFGNLYHSFAEWADVRAVATRASL 60
           MAY +SA AERE MQVN   RKPRILLAASGSVA+IKFGNL H F+EWA+VRAVAT+ASL
Sbjct: 1   MAYSESATAEREPMQVNASPRKPRILLAASGSVAAIKFGNLCHCFSEWAEVRAVATKASL 60

Query: 61  HFIDRASLPKDAVLYTDEDEWTGWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGL 120
           HFIDRASLPKD VLYTDEDEW+ WNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGL
Sbjct: 61  HFIDRASLPKDVVLYTDEDEWSSWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGL 120

Query: 121 CDNLLTCVVRAWDYNKPLFVAPAMNTFMWTNPFTERHLIAIDELGITLIPPVTKRLACGD 180
           CDNLLTCVVRAWDYNKPLFVAPAMNTFMW NPFTERHL++IDELGI+LIPPVTKRLACGD
Sbjct: 121 CDNLLTCVVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDELGISLIPPVTKRLACGD 180

Query: 181 YGNGAMAEPSLIFSTVRLFYESRMQ 206
           YGNGAMAEPSLI+ST+RLF ESR Q
Sbjct: 181 YGNGAMAEPSLIYSTIRLFLESRPQ 205

[Close]
BLAST of Csa1G050090 vs. TrEMBL
Match: W9RGR9_9ROSA (Phosphopantothenoylcysteine decarboxylase OS=Morus notabilis GN=L484_008185 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 1.5e-98
Identity = 177/201 (88.06%), Postives = 189/201 (94.03%), Query Frame = 1 

Query: 10  EREVMQVNNVQRKPRILLAASGSVASIKFGNLYHSFAEWADVRAVATRASLHFIDRASLP 69
           ERE MQVN   R+PRILLAASGSVA+IKFGNL HSFAEWA+VRAVATRASLHFIDRASLP
Sbjct: 9   EREPMQVNAAPRRPRILLAASGSVAAIKFGNLCHSFAEWAEVRAVATRASLHFIDRASLP 68

Query: 70  KDAVLYTDEDEWTGWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCVV 129
           KDAVLYTDEDEW+ W+KIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTC+V
Sbjct: 69  KDAVLYTDEDEWSSWSKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIV 128

Query: 130 RAWDYNKPLFVAPAMNTFMWTNPFTERHLIAIDELGITLIPPVTKRLACGDYGNGAMAEP 189
           RAWDY KP+FVAPAMNTFMW NPFTERHL++IDELGI+LIPPV+KRLACGDYGNGAMAEP
Sbjct: 129 RAWDYTKPIFVAPAMNTFMWNNPFTERHLMSIDELGISLIPPVSKRLACGDYGNGAMAEP 188

Query: 190 SLIFSTVRLFYESRMQQSAKN 211
           SLI+STVRLF ESR QQ  KN
Sbjct: 189 SLIYSTVRLFVESRNQQGGKN 209

[Close]
BLAST of Csa1G050090 vs. TrEMBL
Match: A0A067KFL2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09314 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 6.2e-97
Identity = 174/205 (84.88%), Postives = 188/205 (91.71%), Query Frame = 1 

Query: 1   MAYPKSANAEREVMQVNNVQRKPRILLAASGSVASIKFGNLYHSFAEWADVRAVATRASL 60
           MAY + A  ERE +Q   V RKPRILLAASGSVA+IKFGNL H F+EWA+V+AVATRASL
Sbjct: 1   MAYSEPATTEREPVQGTAVPRKPRILLAASGSVAAIKFGNLCHCFSEWAEVKAVATRASL 60

Query: 61  HFIDRASLPKDAVLYTDEDEWTGWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGL 120
           HFIDRASLPKD VLYTDEDEW+ WNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGL
Sbjct: 61  HFIDRASLPKDVVLYTDEDEWSSWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGL 120

Query: 121 CDNLLTCVVRAWDYNKPLFVAPAMNTFMWTNPFTERHLIAIDELGITLIPPVTKRLACGD 180
           CDNLLTC+VRAWDYNKPLFVAPAMNTFMW NPFTE+HL++IDELGI+LIPPV KRLACGD
Sbjct: 121 CDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTEKHLMSIDELGISLIPPVPKRLACGD 180

Query: 181 YGNGAMAEPSLIFSTVRLFYESRMQ 206
           YGNGAMAEPSLI+ST+RLF ESR Q
Sbjct: 181 YGNGAMAEPSLIYSTIRLFLESRTQ 205

[Close]
BLAST of Csa1G050090 vs. TAIR10
Match: AT3G18030.1 (AT3G18030.1 HAL3-like protein A)

HSP 1 Score: 338.2 bits (866), Expect = 3.7e-93
Identity = 154/202 (76.24%), Postives = 178/202 (88.12%), Query Frame = 1 

Query: 5   KSANAEREVMQVNNVQRKPRILLAASGSVASIKFGNLYHSFAEWADVRAVATRASLHFID 64
           ++   +R+ M+VN   RKPR+LLAASGSVA+IKFGNL H F EWA+VRAV T++SLHF+D
Sbjct: 2   ENGKRDRQDMEVNTTPRKPRVLLAASGSVAAIKFGNLCHCFTEWAEVRAVVTKSSLHFLD 61

Query: 65  RASLPKDAVLYTDEDEWTGWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNL 124
           + SLP++  LYTDEDEW+ WNKIGD VLHIELRRWAD++VIAPLSANTLGKIAGGLCDNL
Sbjct: 62  KLSLPQEVTLYTDEDEWSSWNKIGDPVLHIELRRWADVLVIAPLSANTLGKIAGGLCDNL 121

Query: 125 LTCVVRAWDYNKPLFVAPAMNTFMWTNPFTERHLIAIDELGITLIPPVTKRLACGDYGNG 184
           LTC++RAWDY KPLFVAPAMNT MW NPFTERHL+++DELGITLIPP+ KRLACGDYGNG
Sbjct: 122 LTCIIRAWDYTKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPPIKKRLACGDYGNG 181

Query: 185 AMAEPSLIFSTVRLFYESRMQQ 207
           AMAEPSLI+STVRLF+ES+  Q
Sbjct: 182 AMAEPSLIYSTVRLFWESQAHQ 203

[Close]
BLAST of Csa1G050090 vs. TAIR10
Match: AT1G48605.1 (AT1G48605.1 Flavoprotein)

HSP 1 Score: 327.4 bits (838), Expect = 6.5e-90
Identity = 150/193 (77.72%), Postives = 175/193 (90.67%), Query Frame = 1 

Query: 14  MQVNNVQRKPRILLAASGSVASIKFGNLYHSFAEWADVRAVATRASLHFIDRASLPKDAV 73
           M+V+ V RKPRILLAASGSVASIKF NL H F+EWA+V+AVA+++SL+F+D+ SLP++  
Sbjct: 3   MEVDTVTRKPRILLAASGSVASIKFSNLCHCFSEWAEVKAVASKSSLNFVDKPSLPQNVT 62

Query: 74  LYTDEDEWTGWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCVVRAWD 133
           LYTDEDEW+ WNKIGD VLHIELRRWAD+M+IAPLSANTL KIAGGLCDNLLTC+VRAWD
Sbjct: 63  LYTDEDEWSSWNKIGDPVLHIELRRWADVMIIAPLSANTLAKIAGGLCDNLLTCIVRAWD 122

Query: 134 YNKPLFVAPAMNTFMWTNPFTERHLIAIDELGITLIPPVTKRLACGDYGNGAMAEPSLIF 193
           Y+KPLFVAPAMNT MW NPFTERHL+ +DELGITLIPP+ K+LACGDYGNGAMAEPSLI+
Sbjct: 123 YSKPLFVAPAMNTLMWNNPFTERHLVLLDELGITLIPPIKKKLACGDYGNGAMAEPSLIY 182

Query: 194 STVRLFYESRMQQ 207
           STVRLF+ES+ ++
Sbjct: 183 STVRLFWESQARK 195

[Close]
BLAST of Csa1G050090 vs. NCBI nr
Match: gi|449469602|ref|XP_004152508.1| (PREDICTED: probable phosphopantothenoylcysteine decarboxylase [Cucumis sativus])

HSP 1 Score: 432.2 bits (1110), Expect = 5.3e-118
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 1 

Query: 1   MAYPKSANAEREVMQVNNVQRKPRILLAASGSVASIKFGNLYHSFAEWADVRAVATRASL 60
           MAYPKSANAEREVMQVNNVQRKPRILLAASGSVASIKFGNLYHSFAEWADVRAVATRASL
Sbjct: 1   MAYPKSANAEREVMQVNNVQRKPRILLAASGSVASIKFGNLYHSFAEWADVRAVATRASL 60

Query: 61  HFIDRASLPKDAVLYTDEDEWTGWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGL 120
           HFIDRASLPKDAVLYTDEDEWTGWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGL
Sbjct: 61  HFIDRASLPKDAVLYTDEDEWTGWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGL 120

Query: 121 CDNLLTCVVRAWDYNKPLFVAPAMNTFMWTNPFTERHLIAIDELGITLIPPVTKRLACGD 180
           CDNLLTCVVRAWDYNKPLFVAPAMNTFMWTNPFTERHLIAIDELGITLIPPVTKRLACGD
Sbjct: 121 CDNLLTCVVRAWDYNKPLFVAPAMNTFMWTNPFTERHLIAIDELGITLIPPVTKRLACGD 180

Query: 181 YGNGAMAEPSLIFSTVRLFYESRMQQSAKNGE 213
           YGNGAMAEPSLIFSTVRLFYESRMQQSAKNGE
Sbjct: 181 YGNGAMAEPSLIFSTVRLFYESRMQQSAKNGE 212

[Close]
BLAST of Csa1G050090 vs. NCBI nr
Match: gi|255570655|ref|XP_002526282.1| (PREDICTED: phosphopantothenoylcysteine decarboxylase [Ricinus communis])

HSP 1 Score: 372.9 bits (956), Expect = 3.8e-100
Identity = 181/205 (88.29%), Postives = 192/205 (93.66%), Query Frame = 1 

Query: 1   MAYPKSANAEREVMQVNNVQRKPRILLAASGSVASIKFGNLYHSFAEWADVRAVATRASL 60
           MAY +SA AERE MQVN   RKPRILLAASGSVA+IKFGNL H F+EWA+VRAVAT+ASL
Sbjct: 1   MAYSESATAEREPMQVNASPRKPRILLAASGSVAAIKFGNLCHCFSEWAEVRAVATKASL 60

Query: 61  HFIDRASLPKDAVLYTDEDEWTGWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGL 120
           HFIDRASLPKD VLYTDEDEW+ WNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGL
Sbjct: 61  HFIDRASLPKDVVLYTDEDEWSSWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGL 120

Query: 121 CDNLLTCVVRAWDYNKPLFVAPAMNTFMWTNPFTERHLIAIDELGITLIPPVTKRLACGD 180
           CDNLLTCVVRAWDYNKPLFVAPAMNTFMW NPFTERHL++IDELGI+LIPPVTKRLACGD
Sbjct: 121 CDNLLTCVVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDELGISLIPPVTKRLACGD 180

Query: 181 YGNGAMAEPSLIFSTVRLFYESRMQ 206
           YGNGAMAEPSLI+ST+RLF ESR Q
Sbjct: 181 YGNGAMAEPSLIYSTIRLFLESRPQ 205

[Close]
BLAST of Csa1G050090 vs. NCBI nr
Match: gi|703119739|ref|XP_010101940.1| (Phosphopantothenoylcysteine decarboxylase [Morus notabilis])

HSP 1 Score: 367.1 bits (941), Expect = 2.1e-98
Identity = 177/201 (88.06%), Postives = 189/201 (94.03%), Query Frame = 1 

Query: 10  EREVMQVNNVQRKPRILLAASGSVASIKFGNLYHSFAEWADVRAVATRASLHFIDRASLP 69
           ERE MQVN   R+PRILLAASGSVA+IKFGNL HSFAEWA+VRAVATRASLHFIDRASLP
Sbjct: 9   EREPMQVNAAPRRPRILLAASGSVAAIKFGNLCHSFAEWAEVRAVATRASLHFIDRASLP 68

Query: 70  KDAVLYTDEDEWTGWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCVV 129
           KDAVLYTDEDEW+ W+KIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTC+V
Sbjct: 69  KDAVLYTDEDEWSSWSKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIV 128

Query: 130 RAWDYNKPLFVAPAMNTFMWTNPFTERHLIAIDELGITLIPPVTKRLACGDYGNGAMAEP 189
           RAWDY KP+FVAPAMNTFMW NPFTERHL++IDELGI+LIPPV+KRLACGDYGNGAMAEP
Sbjct: 129 RAWDYTKPIFVAPAMNTFMWNNPFTERHLMSIDELGISLIPPVSKRLACGDYGNGAMAEP 188

Query: 190 SLIFSTVRLFYESRMQQSAKN 211
           SLI+STVRLF ESR QQ  KN
Sbjct: 189 SLIYSTVRLFVESRNQQGGKN 209

[Close]
BLAST of Csa1G050090 vs. NCBI nr
Match: gi|802620831|ref|XP_012075726.1| (PREDICTED: probable phosphopantothenoylcysteine decarboxylase [Jatropha curcas])

HSP 1 Score: 361.7 bits (927), Expect = 8.9e-97
Identity = 174/205 (84.88%), Postives = 188/205 (91.71%), Query Frame = 1 

Query: 1   MAYPKSANAEREVMQVNNVQRKPRILLAASGSVASIKFGNLYHSFAEWADVRAVATRASL 60
           MAY + A  ERE +Q   V RKPRILLAASGSVA+IKFGNL H F+EWA+V+AVATRASL
Sbjct: 1   MAYSEPATTEREPVQGTAVPRKPRILLAASGSVAAIKFGNLCHCFSEWAEVKAVATRASL 60

Query: 61  HFIDRASLPKDAVLYTDEDEWTGWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGL 120
           HFIDRASLPKD VLYTDEDEW+ WNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGL
Sbjct: 61  HFIDRASLPKDVVLYTDEDEWSSWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGL 120

Query: 121 CDNLLTCVVRAWDYNKPLFVAPAMNTFMWTNPFTERHLIAIDELGITLIPPVTKRLACGD 180
           CDNLLTC+VRAWDYNKPLFVAPAMNTFMW NPFTE+HL++IDELGI+LIPPV KRLACGD
Sbjct: 121 CDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTEKHLMSIDELGISLIPPVPKRLACGD 180

Query: 181 YGNGAMAEPSLIFSTVRLFYESRMQ 206
           YGNGAMAEPSLI+ST+RLF ESR Q
Sbjct: 181 YGNGAMAEPSLIYSTIRLFLESRTQ 205

[Close]
BLAST of Csa1G050090 vs. NCBI nr
Match: gi|567895062|ref|XP_006440019.1| (hypothetical protein CICLE_v10022229mg [Citrus clementina])

HSP 1 Score: 360.5 bits (924), Expect = 2.0e-96
Identity = 172/205 (83.90%), Postives = 188/205 (91.71%), Query Frame = 1 

Query: 1   MAYPKSANAEREVMQVNNVQRKPRILLAASGSVASIKFGNLYHSFAEWADVRAVATRASL 60
           MAY +  + +RE MQVN   RKPRILLAASGSVA+IKFGNL H F+EWA+VRAVAT++SL
Sbjct: 1   MAYSEPTSTDREAMQVNTGLRKPRILLAASGSVAAIKFGNLCHCFSEWAEVRAVATKSSL 60

Query: 61  HFIDRASLPKDAVLYTDEDEWTGWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGL 120
           HFIDRA+LPKD + YTDEDEW  WNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGL
Sbjct: 61  HFIDRAALPKDVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGL 120

Query: 121 CDNLLTCVVRAWDYNKPLFVAPAMNTFMWTNPFTERHLIAIDELGITLIPPVTKRLACGD 180
           CDNLLTC+VRAWDYNKPLFVAPAMNTFMW NPFTERHL++IDELGI+LIPPV+KRLACGD
Sbjct: 121 CDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDELGISLIPPVSKRLACGD 180

Query: 181 YGNGAMAEPSLIFSTVRLFYESRMQ 206
           YGNGAMAEPSLI+STVRLF ESR Q
Sbjct: 181 YGNGAMAEPSLIYSTVRLFAESRNQ 205

The following BLAST results are available for this feature:
BLAST of Csa1G050090 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HAL3A_ARATH6.6e-9276.24Phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana GN=HAL3A PE=1 ... [more]
HAL3B_ARATH1.2e-8877.72Probable phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana GN=HA... [more]
HAL3_ORYSJ1.4e-8180.79Phosphopantothenoylcysteine decarboxylase OS=Oryza sativa subsp. japonica GN=HAL... [more]
COAC_MOUSE3.9e-4447.45Phosphopantothenoylcysteine decarboxylase OS=Mus musculus GN=Ppcdc PE=1 SV=1[more]
COAC_HUMAN9.6e-4347.15Phosphopantothenoylcysteine decarboxylase OS=Homo sapiens GN=PPCDC PE=1 SV=2[more]
BLAST of Csa1G050090 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GBX2_CUCME3.7e-118100.00Phosphopentothenoylcysteine decarboxylase OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0LR29_CUCSA3.7e-118100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050090 PE=4 SV=1[more]
B9SJW3_RICCO2.7e-10088.29Phosphopentothenoylcysteine decarboxylase, putative OS=Ricinus communis GN=RCOM_... [more]
W9RGR9_9ROSA1.5e-9888.06Phosphopantothenoylcysteine decarboxylase OS=Morus notabilis GN=L484_008185 PE=4... [more]
A0A067KFL2_JATCU6.2e-9784.88Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09314 PE=4 SV=1[more]
BLAST of Csa1G050090 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G18030.13.7e-9376.24 HAL3-like protein A[more]
AT1G48605.16.5e-9077.72 Flavoprotein[more]
BLAST of Csa1G050090 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449469602|ref|XP_004152508.1|5.3e-118100.00PREDICTED: probable phosphopantothenoylcysteine decarboxylase [Cucumis sativus][more]
gi|255570655|ref|XP_002526282.1|3.8e-10088.29PREDICTED: phosphopantothenoylcysteine decarboxylase [Ricinus communis][more]
gi|703119739|ref|XP_010101940.1|2.1e-9888.06Phosphopantothenoylcysteine decarboxylase [Morus notabilis][more]
gi|802620831|ref|XP_012075726.1|8.9e-9784.88PREDICTED: probable phosphopantothenoylcysteine decarboxylase [Jatropha curcas][more]
gi|567895062|ref|XP_006440019.1|2.0e-9683.90hypothetical protein CICLE_v10022229mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003382Flavoprotein
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015940 pantothenate biosynthetic process
biological_process GO:0006631 fatty acid metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004633 phosphopantothenoylcysteine decarboxylase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0008126 acetylesterase activity
molecular_function GO:0016788 hydrolase activity, acting on ester bonds
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU094329cucumber EST collection version 3.0transcribed_cluster
CU144295cucumber EST collection version 3.0transcribed_cluster
CU161130cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G050090.1Csa1G050090.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU144295CU144295transcribed_cluster
CU161130CU161130transcribed_cluster
CU094329CU094329transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003382FlavoproteinGENE3DG3DSA:3.40.50.1950coord: 23..197
score: 1.7
IPR003382FlavoproteinPFAMPF02441Flavoproteincoord: 24..154
score: 3.6
IPR003382FlavoproteinunknownSSF52507Homo-oligomeric flavin-containing Cys decarboxylases, HFCDcoord: 22..199
score: 4.84
NoneNo IPR availablePANTHERPTHR14359HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILYcoord: 1..212
score: 9.9E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G050090Cla002583Watermelon (97103) v1cuwmB008
Csa1G050090MELO3C002329Melon (DHL92) v3.5.1cumeB027
Csa1G050090ClCG03G003440Watermelon (Charleston Gray)cuwcgB035
Csa1G050090Lsi02G004680Bottle gourd (USVL1VR-Ls)culsiB022
Csa1G050090MELO3C002329.2Melon (DHL92) v3.6.1cumedB022
Csa1G050090Cla97C03G054520Watermelon (97103) v2cuwmbB032
Csa1G050090Bhi08G001379Wax gourdcuwgoB030
Csa1G050090CSPI01G09150Wild cucumber (PI 183967)cpicuB000
Csa1G050090Cucsa.157520Cucumber (Gy14) v1cgycuB225
Csa1G050090Cucsa.391710Cucumber (Gy14) v1cgycuB547
Csa1G050090CmaCh18G002100Cucurbita maxima (Rimu)cmacuB390
Csa1G050090CmaCh10G000760Cucurbita maxima (Rimu)cmacuB071
Csa1G050090CmoCh10G000750Cucurbita moschata (Rifu)cmocuB061
Csa1G050090CmoCh18G001870Cucurbita moschata (Rifu)cmocuB380
Csa1G050090CmoCh13G008090Cucurbita moschata (Rifu)cmocuB189
Csa1G050090Cp4.1LG18g08890Cucurbita pepo (Zucchini)cpecuB359
Csa1G050090CsGy1G009180Cucumber (Gy14) v2cgybcuB001
Csa1G050090Carg10298Silver-seed gourdcarcuB0393
Csa1G050090Carg06771Silver-seed gourdcarcuB0523
Csa1G050090Carg07574Silver-seed gourdcarcuB1017
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G050090Cucurbita pepo (Zucchini)cpecuB515
Csa1G050090Bottle gourd (USVL1VR-Ls)culsiB085
Csa1G050090Watermelon (97103) v2cuwmbB087
Csa1G050090Cucumber (Chinese Long) v2cucuB007
Csa1G050090Cucurbita maxima (Rimu)cmacuB204
Csa1G050090Watermelon (Charleston Gray)cuwcgB089
Csa1G050090Cucurbita pepo (Zucchini)cpecuB029