Cucsa.147970 (gene) Cucumber (Gy14) v1

NameCucsa.147970
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionWound-responsive family protein, putative
Locationscaffold01107 : 265245 .. 266274 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGGGGGTTTCTATGTTTTTTCAATCAACGCAATAACGGTGAACGAGTTGTGTGAGTGAGCGAGTGAGTTAACTCAGTTTATCTTAAAAAGAACTTTGTGTTAAGTGTTTGAGGTTGAAGATGAGTTACCTGAACAGAGTTGGAATGGCGGCCAGTGTGGCTGTGGCTCAAGGCCATACCGAGATCGGACACAAGTGGAAGTCTGGACTTAAATCTCTTCGACAAGGTCGGAGACTTTTGTCCTCCGGCGATAATTCGGCGGATCTCCGTCCACTGTCCAGTTTGGTTGGATCGGAAGGCTCTGGAAGTGTGCGGAGCTGTGACGTTGACGAGAGGATAGCACAATCGGAGGATTCTCTCCGGAGAGTTATGTACTTGAACTGTTGGGGCCAAGGGTGATTGGCTTCTAGGTCACTTTTGGTGACATGTAGAGAGATCTGGTCGGCGATCGTTGATCGACGATCAGATTTGGAGCTACTCGAGCGAGATGGAATTCGAGGTATTTGATATGGGATTGACGCGATGAAGATTGAGTGATGATTGATCAATAACCTTGAAAATTATTTGGAAAAATCGCTATGTAGCTTTGGGATAATTGTACAGAAGAAAAAGGGAAATGAATCGGTTTCTTTGAAATATAATAAATCTCGATTCTGTTTTTCTTTGCTTAATTTGAAGTTTATGTGCAACTAAGTGAGGTTAAATTCAACTGAACTGAATCCAGAACCCAGATCTGTTTAACTGACTACCTTTTGATGAATCAAATCGAAAATTTGTTTGGATCTGAACTAATTTTAGGGTTTAGAAGCTCTTCATATTTAAAAGATTTTTCACCGAGATCTGCTGGAGAAGATGGTAACCAAGATGGCAACAAGCCAACTTTTTGAGATTCAATTTCTTTTATTTTCTTTAAGTCAAGTTGTCTGGGGGATGGAAATTTCATTTGAATCTTCAGATAATTTATAATTTTGTTATGTGAATTAGCTTCATACTTTGCTTCCAAGGATTTCCTATGCAAAATTATTCTTTT

mRNA sequence

TGGGGGGTTTCTATGTTTTTTCAATCAACGCAATAACGGTGAACGAGTTGTGTGAGTGAGCGAGTGAGTTAACTCAGTTTATCTTAAAAAGAACTTTGTGTTAAGTGTTTGAGGTTGAAGATGAGTTACCTGAACAGAGTTGGAATGGCGGCCAGTGTGGCTGTGGCTCAAGGCCATACCGAGATCGGACACAAGTGGAAGTCTGGACTTAAATCTCTTCGACAAGGTCGGAGACTTTTGTCCTCCGGCGATAATTCGGCGGATCTCCGTCCACTGTCCAGTTTGGTTGGATCGGAAGGCTCTGGAAGTGTGCGGAGCTGTGACGTTGACGAGAGGATAGCACAATCGGAGGATTCTCTCCGGAGAGTTATGTACTTGAACTGTTGGGGCCAAGGGTGATTGGCTTCTAGGTCACTTTTGGTGACATGTAGAGAGATCTGGTCGGCGATCGTTGATCGACGATCAGATTTGGAGCTACTCGAGCGAGATGGAATTCGAGGTATTTGATATGGGATTGACGCGATGAAGATTGAGTGATGATTGATCAATAACCTTGAAAATTATTTGGAAAAATCGCTATGTAGCTTTGGGATAATTGTACAGAAGAAAAAGGGAAATGAATCGGTTTCTTTGAAATATAATAAATCTCGATTCTGTTTTTCTTTGCTTAATTTGAAGTTTATGTGCAACTAAGTGAGGTTAAATTCAACTGAACTGAATCCAGAACCCAGATCTGTTTAACTGACTACCTTTTGATGAATCAAATCGAAAATTTGTTTGGATCTGAACTAATTTTAGGGTTTAGAAGCTCTTCATATTTAAAAGATTTTTCACCGAGATCTGCTGGAGAAGATGGTAACCAAGATGGCAACAAGCCAACTTTTTGAGATTCAATTTCTTTTATTTTCTTTAAGTCAAGTTGTCTGGGGGATGGAAATTTCATTTGAATCTTCAGATAATTTATAATTTTGTTATGTGAATTAGCTTCATACTTTGCTTCCAAGGATTTCCTATGCAAAATTATTCTTTT

Coding sequence (CDS)

ATGAGTTACCTGAACAGAGTTGGAATGGCGGCCAGTGTGGCTGTGGCTCAAGGCCATACCGAGATCGGACACAAGTGGAAGTCTGGACTTAAATCTCTTCGACAAGGTCGGAGACTTTTGTCCTCCGGCGATAATTCGGCGGATCTCCGTCCACTGTCCAGTTTGGTTGGATCGGAAGGCTCTGGAAGTGTGCGGAGCTGTGACGTTGACGAGAGGATAGCACAATCGGAGGATTCTCTCCGGAGAGTTATGTACTTGAACTGTTGGGGCCAAGGGTGA

Protein sequence

MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGDNSADLRPLSSLVGSEGSGSVRSCDVDERIAQSEDSLRRVMYLNCWGQG*
BLAST of Cucsa.147970 vs. TrEMBL
Match: A0A0A0K6Z3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G046690 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 5.9e-44
Identity = 91/92 (98.91%), Postives = 92/92 (100.00%), Query Frame = 1

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGDNSADLRPLSSLVGSEG 60
          MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSG+NSADLRPLSSLVGSEG
Sbjct: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG 60

Query: 61 SGSVRSCDVDERIAQSEDSLRRVMYLNCWGQG 93
          SGSVRSCDVDERIAQSEDSLRRVMYLNCWGQG
Sbjct: 61 SGSVRSCDVDERIAQSEDSLRRVMYLNCWGQG 92

BLAST of Cucsa.147970 vs. TrEMBL
Match: A0A151RLL3_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_022629 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 9.8e-23
Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 1

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGDNSADLRPLSSLVGSEG 60
          MSYLNRV MAA+VAVAQGHT+ GHK K+ L S+   R  L SG   +DLRPLS +VGS+ 
Sbjct: 1  MSYLNRVWMAATVAVAQGHTDPGHKCKTALTSIHHNRSRLFSGGPLSDLRPLSGVVGSDV 60

Query: 61 SGSVR-SCDVDERIAQSEDSLRRVMYLNCWGQG 93
          +G+V  S DVD R+ Q++DSLR+VMYL+CWGQG
Sbjct: 61 AGAVAGSSDVDNRVRQADDSLRKVMYLSCWGQG 93

BLAST of Cucsa.147970 vs. TrEMBL
Match: A0A0B2P9R7_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_037964 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 9.8e-23
Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 1

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGDNSADLRPLSSLVGSEG 60
          MSYLNRV MAA+VAVAQGHT  GHK K+ L S+   R  L SG + +DLRPLS +VGS+ 
Sbjct: 1  MSYLNRVWMAATVAVAQGHTHPGHKCKTALTSIHHNRSRLFSGGSLSDLRPLSGVVGSDV 60

Query: 61 SGSVR-SCDVDERIAQSEDSLRRVMYLNCWGQG 93
          +GSV  S DV+ R+ Q++DSLR+VMYL+CWGQG
Sbjct: 61 AGSVAGSSDVENRVRQADDSLRKVMYLSCWGQG 93

BLAST of Cucsa.147970 vs. TrEMBL
Match: I1LUD2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G201000 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.3e-22
Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 1

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGDNSADLRPLSSLVGSEG 60
          MSYLNRV MAA+VAVAQGHT+ GHK K+ L S+   R  L SG   +DLRPLS +VGS+ 
Sbjct: 1  MSYLNRVWMAATVAVAQGHTDPGHKCKTALTSIHHNRSRLFSGGALSDLRPLSGVVGSDV 60

Query: 61 SGSVR-SCDVDERIAQSEDSLRRVMYLNCWGQG 93
          +GSV  S DV+ R+ Q++DSLR+VMYL+CWGQG
Sbjct: 61 AGSVAGSSDVENRVRQADDSLRKVMYLSCWGQG 93

BLAST of Cucsa.147970 vs. TrEMBL
Match: A0A0S3SHH3_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G093200 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.8e-22
Identity = 56/93 (60.22%), Postives = 73/93 (78.49%), Query Frame = 1

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGDNSADLRPLSSLVGSEG 60
          MSYLNRV MAA+VAVAQGHT+ G+K K+ L S+   R  L SG   +DLRPLS +VGS+G
Sbjct: 1  MSYLNRVWMAATVAVAQGHTDPGYKCKTALNSIHHNRSRLFSGGALSDLRPLSGVVGSDG 60

Query: 61 SGSVR-SCDVDERIAQSEDSLRRVMYLNCWGQG 93
          +G+V  S DV +R+ Q+++SLR+VMYL+CWGQG
Sbjct: 61 AGAVAGSSDVQKRVTQADESLRKVMYLSCWGQG 93

BLAST of Cucsa.147970 vs. TAIR10
Match: AT4G28240.1 (AT4G28240.1 Wound-responsive family protein)

HSP 1 Score: 67.8 bits (164), Expect = 4.1e-12
Identity = 43/94 (45.74%), Postives = 58/94 (61.70%), Query Frame = 1

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGDNSADLRPLSSLVGSEG 60
          MSYLN+V MAAS    QG+ + G K KSGL S  + +R LSS     DLRPL++   ++ 
Sbjct: 1  MSYLNKVWMAASFVAVQGNADHGVKLKSGLTSAHRLQRRLSS-----DLRPLAA---ADL 60

Query: 61 SGSVRSCDVDERIAQS--EDSLRRVMYLNCWGQG 93
          +G     +   R + S  ++SLR+VMYLNCW QG
Sbjct: 61 TGDSLPSEERRRTSSSTPDESLRQVMYLNCWAQG 86

BLAST of Cucsa.147970 vs. NCBI nr
Match: gi|659110677|ref|XP_008455353.1| (PREDICTED: uncharacterized protein LOC103495540 [Cucumis melo])

HSP 1 Score: 184.5 bits (467), Expect = 8.5e-44
Identity = 91/92 (98.91%), Postives = 92/92 (100.00%), Query Frame = 1

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGDNSADLRPLSSLVGSEG 60
          MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSG+NSADLRPLSSLVGSEG
Sbjct: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG 60

Query: 61 SGSVRSCDVDERIAQSEDSLRRVMYLNCWGQG 93
          SGSVRSCDVDERIAQSEDSLRRVMYLNCWGQG
Sbjct: 61 SGSVRSCDVDERIAQSEDSLRRVMYLNCWGQG 92

BLAST of Cucsa.147970 vs. NCBI nr
Match: gi|1012332018|gb|KYP43466.1| (hypothetical protein KK1_035112 [Cajanus cajan])

HSP 1 Score: 114.0 bits (284), Expect = 1.4e-22
Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 1

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGDNSADLRPLSSLVGSEG 60
          MSYLNRV MAA+VAVAQGHT+ GHK K+ L S+   R  L SG   +DLRPLS +VGS+ 
Sbjct: 1  MSYLNRVWMAATVAVAQGHTDPGHKCKTALTSIHHNRSRLFSGGPLSDLRPLSGVVGSDV 60

Query: 61 SGSVR-SCDVDERIAQSEDSLRRVMYLNCWGQG 93
          +G+V  S DVD R+ Q++DSLR+VMYL+CWGQG
Sbjct: 61 AGAVAGSSDVDNRVRQADDSLRKVMYLSCWGQG 93

BLAST of Cucsa.147970 vs. NCBI nr
Match: gi|734321859|gb|KHN04284.1| (hypothetical protein glysoja_037964 [Glycine soja])

HSP 1 Score: 114.0 bits (284), Expect = 1.4e-22
Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 1

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGDNSADLRPLSSLVGSEG 60
          MSYLNRV MAA+VAVAQGHT  GHK K+ L S+   R  L SG + +DLRPLS +VGS+ 
Sbjct: 1  MSYLNRVWMAATVAVAQGHTHPGHKCKTALTSIHHNRSRLFSGGSLSDLRPLSGVVGSDV 60

Query: 61 SGSVR-SCDVDERIAQSEDSLRRVMYLNCWGQG 93
          +GSV  S DV+ R+ Q++DSLR+VMYL+CWGQG
Sbjct: 61 AGSVAGSSDVENRVRQADDSLRKVMYLSCWGQG 93

BLAST of Cucsa.147970 vs. NCBI nr
Match: gi|356543792|ref|XP_003540344.1| (PREDICTED: uncharacterized protein LOC100817529 [Glycine max])

HSP 1 Score: 113.6 bits (283), Expect = 1.8e-22
Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 1

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGDNSADLRPLSSLVGSEG 60
          MSYLNRV MAA+VAVAQGHT+ GHK K+ L S+   R  L SG   +DLRPLS +VGS+ 
Sbjct: 1  MSYLNRVWMAATVAVAQGHTDPGHKCKTALTSIHHNRSRLFSGGALSDLRPLSGVVGSDV 60

Query: 61 SGSVR-SCDVDERIAQSEDSLRRVMYLNCWGQG 93
          +GSV  S DV+ R+ Q++DSLR+VMYL+CWGQG
Sbjct: 61 AGSVAGSSDVENRVRQADDSLRKVMYLSCWGQG 93

BLAST of Cucsa.147970 vs. NCBI nr
Match: gi|965605071|dbj|BAT92247.1| (hypothetical protein VIGAN_07093200 [Vigna angularis var. angularis])

HSP 1 Score: 112.5 bits (280), Expect = 4.1e-22
Identity = 56/93 (60.22%), Postives = 73/93 (78.49%), Query Frame = 1

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGDNSADLRPLSSLVGSEG 60
          MSYLNRV MAA+VAVAQGHT+ G+K K+ L S+   R  L SG   +DLRPLS +VGS+G
Sbjct: 1  MSYLNRVWMAATVAVAQGHTDPGYKCKTALNSIHHNRSRLFSGGALSDLRPLSGVVGSDG 60

Query: 61 SGSVR-SCDVDERIAQSEDSLRRVMYLNCWGQG 93
          +G+V  S DV +R+ Q+++SLR+VMYL+CWGQG
Sbjct: 61 AGAVAGSSDVQKRVTQADESLRKVMYLSCWGQG 93

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K6Z3_CUCSA5.9e-4498.91Uncharacterized protein OS=Cucumis sativus GN=Csa_7G046690 PE=4 SV=1[more]
A0A151RLL3_CAJCA9.8e-2362.37Uncharacterized protein OS=Cajanus cajan GN=KK1_022629 PE=4 SV=1[more]
A0A0B2P9R7_GLYSO9.8e-2362.37Uncharacterized protein OS=Glycine soja GN=glysoja_037964 PE=4 SV=1[more]
I1LUD2_SOYBN1.3e-2262.37Uncharacterized protein OS=Glycine max GN=GLYMA_12G201000 PE=4 SV=1[more]
A0A0S3SHH3_PHAAN2.8e-2260.22Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G093200 PE=... [more]
Match NameE-valueIdentityDescription
AT4G28240.14.1e-1245.74 Wound-responsive family protein[more]
Match NameE-valueIdentityDescription
gi|659110677|ref|XP_008455353.1|8.5e-4498.91PREDICTED: uncharacterized protein LOC103495540 [Cucumis melo][more]
gi|1012332018|gb|KYP43466.1|1.4e-2262.37hypothetical protein KK1_035112 [Cajanus cajan][more]
gi|734321859|gb|KHN04284.1|1.4e-2262.37hypothetical protein glysoja_037964 [Glycine soja][more]
gi|356543792|ref|XP_003540344.1|1.8e-2262.37PREDICTED: uncharacterized protein LOC100817529 [Glycine max][more]
gi|965605071|dbj|BAT92247.1|4.1e-2260.22hypothetical protein VIGAN_07093200 [Vigna angularis var. angularis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR022251DUF3774_wound-induced
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.147970.1Cucsa.147970.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022251Protein of unknown function wound-inducedPFAMPF12609DUF3774coord: 9..91
score: 9.4
NoneNo IPR availablePANTHERPTHR33090FAMILY NOT NAMEDcoord: 1..92
score: 9.9
NoneNo IPR availablePANTHERPTHR33090:SF1SUBFAMILY NOT NAMEDcoord: 1..92
score: 9.9

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.147970Melon (DHL92) v3.6.1cgymedB245
Cucsa.147970Melon (DHL92) v3.6.1cgymedB247
Cucsa.147970Silver-seed gourdcarcgyB0183
Cucsa.147970Silver-seed gourdcarcgyB0717
Cucsa.147970Silver-seed gourdcarcgyB0997
Cucsa.147970Cucumber (Chinese Long) v3cgycucB222
Cucsa.147970Cucumber (Chinese Long) v3cgycucB225
Cucsa.147970Cucumber (Chinese Long) v3cgycucB226
Cucsa.147970Watermelon (97103) v2cgywmbB247
Cucsa.147970Watermelon (97103) v2cgywmbB251
Cucsa.147970Wax gourdcgywgoB291
Cucsa.147970Wax gourdcgywgoB289
Cucsa.147970Cucumber (Gy14) v1cgycgyB005
Cucsa.147970Cucumber (Gy14) v1cgycgyB076
Cucsa.147970Cucurbita maxima (Rimu)cgycmaB0406
Cucsa.147970Cucurbita maxima (Rimu)cgycmaB0409
Cucsa.147970Cucurbita moschata (Rifu)cgycmoB0404
Cucsa.147970Cucurbita moschata (Rifu)cgycmoB0405
Cucsa.147970Cucurbita moschata (Rifu)cgycmoB0406
Cucsa.147970Cucurbita moschata (Rifu)cgycmoB0407
Cucsa.147970Cucurbita moschata (Rifu)cgycmoB0408
Cucsa.147970Cucurbita moschata (Rifu)cgycmoB0409
Cucsa.147970Wild cucumber (PI 183967)cgycpiB219
Cucsa.147970Melon (DHL92) v3.5.1cgymeB249
Cucsa.147970Watermelon (Charleston Gray)cgywcgB247
Cucsa.147970Watermelon (97103) v1cgywmB259
Cucsa.147970Watermelon (97103) v1cgywmB257
Cucsa.147970Cucurbita pepo (Zucchini)cgycpeB0393
Cucsa.147970Cucurbita pepo (Zucchini)cgycpeB0394
Cucsa.147970Cucurbita pepo (Zucchini)cgycpeB0396
Cucsa.147970Bottle gourd (USVL1VR-Ls)cgylsiB235
Cucsa.147970Bottle gourd (USVL1VR-Ls)cgylsiB238