Cucsa.143880 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.143880
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Methionine-tRNA ligase, putative
Location	scaffold01080 : 259102 .. 264354 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTGAAATTTATTTTATTTTCTATGCACTCTGTTCTTTCCTGGTTATGATCATTGTATAGTTAGTGCAAGTCTTGGGAATTATCTCCATACGCGAATTTGCGGAGATATGTAAATATAGTTTGCGTTTATTGGTTCATTTGTCCCATGATTTTCACCTTCGACACCATTTCTTTGTGGCTTTTTTCTTCTTCATGTTGTGTGTTGTTATTGGAATTTTGTTGCTGAAGTTAACTGCTATTGAATTCAGAATGCATTGATTGGAGAAAATGCGGAATGCGATTTTAGGGCTTATGTACTAAACATCTTGAAAGCTTCAAGAAATGGTGCCTCTGTGGATGATAATATTGAGGTAAGCGTAAATATTTTTCCAAGTTTTCCTTGAAAGTGAAAAGAATTAAAGAGTACAAAAGAGTTGATAAGATTCTACCCAAGTGACCCAAATGAAATTGTTACAAAATGCTCCATTAAGAAAAACATAAGAAAGGGACCAATTTCTAGGCTCCTTAGAGATTCATCAATTACTAGAGTCGAAACATTAGTGTGCCTCTAGAGTTTTCTCAAGTGTTTTTTGAACATTGGAGCTACCCACCCTCCCATTCTTCTTTCAATCCAAACTTTACAAACAGTAGGAAAAGTACAGTTTCACTGTTGAGTATAAATTTTTGTTTTATTTGGATGCCTGATGAAGGAGGGAAATTGAAATTTTCGAACATGGATCCAATAAAGTGCTAGAAGATATTAAAGATATTTTTATAGTATGTTTAACCACATGACATATCAAATAATAAAGAATTAGAATTCTCACAAGCAGACTTGCACCGCACACACTAAGCAGGGAACAAAATGTACGTTGGATTTTTTGTTTTGCACTCTCTACTAAGTGTAGGTTCCCTGCTAGGAAATGGACCAACAAAAACTTCAATCATCCTCAAGCACTTAGCTCTTGGTGCATGCTTAGAGAAGATATTTCTTACACTCAGGACCTTCCCAATGCATCTATTATGAAGGGCAGCGATATATTCACTTGAGATTTTATGGTTTAGATGTTCCTTTGGGGACACCTGATGACGTTAAATTTTTTGTTTTAGATTAAATTTTTGTTTGATCATTACTGTAAAGTGGTTATGGTGTTATATCTAAGAAGCAACCTTTTTGCAGGTGACAAAATGGATTACATTTGCAGATAGCTTTCCTGTAGATTCTAAGGCATGCTTTGACGTTCTCAAACAATTAAATGAAGAACTAGCTCCAAAGTCTGTACTTTTGGGTAAAGGATTGAAGCCATCTGAAGCTGATGTACTTGTGTTTTCAGTACTACACCCTTATGTGGTAAGCATTATTGCATTCCATGACAAGCTTTCTATTCTTAAAATCATTCTTTCCTTTCTTCACAGTCAGTTGGTCATCATTTCTTCATTTAATGTAGACAACTTTTATGTCCTGTTTTCATTTAATGTAGACATCCATCTTAAATCTATGTTGATCTTTTATGTTCAGTTCTTTGGATTCAAGAACTAGTTTGGTATAAGTTTGAAAAAATAACTTTTAGATTGAACAAAGTTGAGAATCAAGATTATAATGAGATGCAACCTGATTGATCACTGCTAGATTGGCCTTTCAAACGCAGAGATGGAAAAGTTGCCACATGTTTTAAGATGGATGGATTACATCCAGGTAGGCCTACTTCTTTAATGATTTGACTGCTTACCAATTGCATGCTGAGATTATTTGTGCTTTTGATTGTCAACTTTTGTTGCATACATGCCAAAATAGGAATTGTTATTGGCTTTTCTTAATTATTTATTCAATTAATGTATGCTTTGAATCCACTTTTATTGTGGCTTAAATATTATTCTGATTTAGTTCCATTACTCTGCCTATTAATACTTGTATAATTTTGTGTTTTAACAGAACAAAGAGAATTTTGGGGAGTTATTTCAGAAGATACTGCTACAGAAATGTGAATTTGATCCTCCAGTAAGTGCTCACTTAATTCTTTTGCATCTGCTAGTTTTTTGCACTTCAAAAAGCAAGGATGCTGAGTTCCCAACTCAGAAGTTGCGCTATGCCAGCTTGGAGCAGCAAAACAAAACTTTGTGAAGTGTATTTCCTTTTGGAAAATAAATTTTCCTTCAAAAAACTAAAACTTGGATTGATTTTTTCAAGTTTCACACATTCATGAAGTTTGTTCTCAAGAAATGTGCATTTCATTTATTAATAATATCGACATAATACTTATGATTGAAAAGTTGGGTTGAACAATTAAAAGTTTTATTAATTAAAGTTGCAGGGAAACAAAGTTGTTGCCAACAATGTTAATGAAGATTCAAATGCCAAGAAGTCTTCGCAAAGCACCAAGGTTTCAGAAAAGCCTCAAGTGAACCCAGACACTAAGAAAACTGATGCAGGGGTAAACCCTTGGTTCCTATACTGGCCTACTCTAGTCTACATTTTGATATTACAGGAAAATTTTATTCTGTTCTTTCTCTCTCTCCCCCCTGAACTTATCTCATCTTCTGAGAGAGATTATTTGTTGATGGAATGCTACTGTTCCAAATTTTGGTCAGAACTGGTGCTTTGACGGAACTGTGAAGGAAGATATTTTTTTATTGCTGAATAGTCTAGCTGTGGTTTTAAGAAAAATAAAGCCATCCTTTGTGAACTTTGGTTAGAGAGAAACCAGTGAATGTGAGCTGGGATGATGTTTTTAACTTAGCTCTGCTTTTATTCTAATCAACTTACTCTTTCACATTTTTTGGATAATCATACTTCTTTTGTGATAAACTCTAATTGGAATGGATTATTGTGAGCTCCTTGAGTCATTTTGATATTGAGCTTTTGGTTTCTTGATTTTAACTTAGTGATTCAGTGGAAAGTTTTGTTTTAGAGTAAAGAACGATAGGTAGAAGAAGAATATTTGCTTTTGAATTCAGATATGACTTGCTCGTAGCTGATAGTTCTCTTTTAGAGTTCAGTGTAGTTTTACTTCTTACGTGCTCAATTTTTGTGGTATGACTTTGATATCCTCTAACTTTTCCTTATTATCTAATTTTCACTCCTGCTTTTAACATTTTTGTTTTAAAATTTGTGGAACTGTTAGAAAAAAGAGAAGGAAAAAAAGGAAGCTGCTCCGGAAAAGAAGAAACCAGTTGAGACTGAAACAGCGGACAAAGAAAAGGAAGTTAGTGTTAGTTTGTTGAATATAAGAGTTGGCCTTATTCGCAAAGCATGGAAACATCCATCTGCTGACAGGTATGGCAAGCAATCTTCCTTTCATTGCTGCTTTCTGCACCACAATAACATTATTTACGTTGTCCTATTGAAGTTCGTTATTCTATCTGAAGCTTAAGTTTGTATCAATCATATTTTAATGATAACTTTTAATGGTTCAGTTTGTTGGTTGAGGAGATAGACGTTGGTGAGGCGAAAGTGCGGCAGGTTGTGAGTGGTCTGGCAAAATACTATAGTCCAGAGGAGTTAACTGTATGATTATATTTATGTCTTAGTTACTTGTGATGGATCGCTACACGTGCAGAGTTCAAAGTCTGATGTTATTCTATTAATATGTGCAGAACCGCCGTGTTGTTCTTATTACTAATGTTAAACCTGGAAAGCTACGAGATGTGATGTCAGAGGGATTGGTATGCTCTAATTTTCTTCTCATTAGAGTTGTTTGATCTTTTACAATCTGAATAGGGACAGTTTCAATTTGAGTGTGTTAGATACCTAGATTAGTATAGGGTTAGGGGTATAAGGGTAATTAGATATTTAGGCGGCTACTAACCGTAGTGGTTATAAATAAGAAGTTGGTGAGTGAAGAGGGGGAGTTGTTGAGTAGATAGGTTTTGAGTAGCATTCTCAATGGAGGGGGTCCCAAGTACCAAAAACTTGGATTATATTGTAGTTCTTAGTTAATTCTCAATATATGAAATATACTGATTTTTGTTAGGAAGTATCCTAACATGATGTTGTGTAGAAGTTGAGTCAACATCGTACTTATTCGAGTAATTATAAACCTCTCATGTTTTTTTGAGTCAATATCGTACTTATTCAATAGTTATAAACCTCTCAGGTGTTATGTGCATCTAATGAAGACCACACCGTCGTGGAACCTTTGCTTCCTCCAGAAGGAGCCAACATTGGTGAACAAATTTCATTTTCTGGGTAAGTTTTTTGAGAGATTACTCAATTTAGCTTCATTGTCAGGCTTGAACCTTTTATGAATCCCTGTGGAGATTAGATGTATATATTTTATACCCTAGATGATGTTTCAAGAATATTTTATTGGTCTTTTTCTTGGTGAATGAGTATTCCTTTTTCTTTTATGGAGGATGGAATGTAGATCCTCAAATCATATAAACATTGGTTGGTATTTATGCGATGTATGATTGATATTCTGAGTGTGTGTCACTTTTCTTTGTTGCTCTATAATTAATCTGTTTTTGATTTCGAATTGTGCTGATATGCGGTGTATTCATTATCTCGTAACTTGGTTTTAGGGTTGATGGAAAACCAGAAGATGTTCTTAACCCCAAAAAGAAGCAACTGGATAAGATTACACCGGTACGTCCACTCTTAACTAACACTCCTTTTCTACAAGCAACCTACCTCTTACATCAAACACAAATATGGTTGTTATTTTGATTGGATGCAGCATCTCTTCACCAACGACAAGGGGGAGGCAACGTTCAAAGGAATTCCTTTCATGACATCTGCAGGACCGTGCACATCGACGATCTCCAAGGGAAGTATCAAATGATAGAATGCATATTATTTATGAATGATATAGTAGAAGAGGAGGAACCCCTTATAACATTGTATACTATTTGGGAAACCAAAGAGAGTTTTGAAGACAAATGGTTATAGTTTTTGATGGTCTTAAAAATTGACATTTCCTGACATCTTCCAACTCTCACCTTCAGTTATGATGTAAAAGCCTTTGAATATGTTCACATTTTGATCAAAGTTTTGAGATTTCAAAAGACA

mRNA sequence

TGTGAAATTTATTTTATTTTCTATGCACTCTGTTCTTTCCTGGTTATGATCATTGTATAGTTAGTGCAAGTCTTGGGAATTATCTCCATACGCGAATTTGCGGAGATATGTAAATATAGTTTGCGTTTATTGGTTCATTTGTCCCATGATTTTCACCTTCGACACCATTTCTTTGTGGCTTTTTTCTTCTTCATGTTGTGTGTTGTTATTGGAATTTTGTTGCTGAAGTTAACTGCTATTGAATTCAGAATGCATTGATTGGAGAAAATGCGGAATGCGATTTTAGGGCTTATGTACTAAACATCTTGAAAGCTTCAAGAAATGGTGCCTCTGTGGATGATAATATTGAGGTGACAAAATGGATTACATTTGCAGATAGCTTTCCTGTAGATTCTAAGGCATGCTTTGACGTTCTCAAACAATTAAATGAAGAACTAGCTCCAAAGTCTGTACTTTTGGGTAAAGGATTGAAGCCATCTGAAGCTGATGTACTTGTGTTTTCAGTACTACACCCTTATGTGATTGGCCTTTCAAACGCAGAGATGGAAAAGTTGCCACATGTTTTAAGATGGATGGATTACATCCAGAACAAAGAGAATTTTGGGGAGTTATTTCAGAAGATACTGCTACAGAAATGTGAATTTGATCCTCCATTGCAGGGAAACAAAGTTGTTGCCAACAATGTTAATGAAGATTCAAATGCCAAGAAGTCTTCGCAAAGCACCAAGGTTTCAGAAAAGCCTCAAGTGAACCCAGACACTAAGAAAACTGATGCAGGGAAAAAAGAGAAGGAAAAAAAGGAAGCTGCTCCGGAAAAGAAGAAACCAGTTGAGACTGAAACAGCGGACAAAGAAAAGGAAGTTAGTGTTAGTTTGTTGAATATAAGAGTTGGCCTTATTCGCAAAGCATGGAAACATCCATCTGCTGACAGTTTGTTGGTTGAGGAGATAGACGTTGGTGAGGCGAAAGTGCGGCAGGTTGTGAGTGGTCTGGCAAAATACTATAGTCCAGAGGAGTTAACTAACCGCCGTGTTGTTCTTATTACTAATGTTAAACCTGGAAAGCTACGAGATGTGATGTCAGAGGGATTGGTGTTATGTGCATCTAATGAAGACCACACCGTCGTGGAACCTTTGCTTCCTCCAGAAGGAGCCAACATTGGTGAACAAATTTCATTTTCTGGGGTTGATGGAAAACCAGAAGATGTTCTTAACCCCAAAAAGAAGCAACTGGATAAGATTACACCGCATCTCTTCACCAACGACAAGGGGGAGGCAACGTTCAAAGGAATTCCTTTCATGACATCTGCAGGACCGTGCACATCGACGATCTCCAAGGGAAGTATCAAATGATAGAATGCATATTATTTATGAATGATATAGTAGAAGAGGAGGAACCCCTTATAACATTGTATACTATTTGGGAAACCAAAGAGAGTTTTGAAGACAAATGGTTATAGTTTTTGATGGTCTTAAAAATTGACATTTCCTGACATCTTCCAACTCTCACCTTCAGTTATGATGTAAAAGCCTTTGAATATGTTCACATTTTGATCAAAGTTTTGAGATTTCAAAAGACA

Coding sequence (CDS)

ATGGAAAAGTTGCCACATGTTTTAAGATGGATGGATTACATCCAGAACAAAGAGAATTTTGGGGAGTTATTTCAGAAGATACTGCTACAGAAATGTGAATTTGATCCTCCATTGCAGGGAAACAAAGTTGTTGCCAACAATGTTAATGAAGATTCAAATGCCAAGAAGTCTTCGCAAAGCACCAAGGTTTCAGAAAAGCCTCAAGTGAACCCAGACACTAAGAAAACTGATGCAGGGAAAAAAGAGAAGGAAAAAAAGGAAGCTGCTCCGGAAAAGAAGAAACCAGTTGAGACTGAAACAGCGGACAAAGAAAAGGAAGTTAGTGTTAGTTTGTTGAATATAAGAGTTGGCCTTATTCGCAAAGCATGGAAACATCCATCTGCTGACAGTTTGTTGGTTGAGGAGATAGACGTTGGTGAGGCGAAAGTGCGGCAGGTTGTGAGTGGTCTGGCAAAATACTATAGTCCAGAGGAGTTAACTAACCGCCGTGTTGTTCTTATTACTAATGTTAAACCTGGAAAGCTACGAGATGTGATGTCAGAGGGATTGGTGTTATGTGCATCTAATGAAGACCACACCGTCGTGGAACCTTTGCTTCCTCCAGAAGGAGCCAACATTGGTGAACAAATTTCATTTTCTGGGGTTGATGGAAAACCAGAAGATGTTCTTAACCCCAAAAAGAAGCAACTGGATAAGATTACACCGCATCTCTTCACCAACGACAAGGGGGAGGCAACGTTCAAAGGAATTCCTTTCATGACATCTGCAGGACCGTGCACATCGACGATCTCCAAGGGAAGTATCAAATGA

Protein sequence

MEKLPHVLRWMDYIQNKENFGELFQKILLQKCEFDPPLQGNKVVANNVNEDSNAKKSSQSTKVSEKPQVNPDTKKTDAGKKEKEKKEAAPEKKKPVETETADKEKEVSVSLLNIRVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYYSPEELTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTVVEPLLPPEGANIGEQISFSGVDGKPEDVLNPKKKQLDKITPHLFTNDKGEATFKGIPFMTSAGPCTSTISKGSIK*

Homology

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BLAST of Cucsa.143880 vs. Swiss-Prot
Match: SYM_ORYSJ (Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica GN=Os06g0508700 PE=2 SV=2)

HSP 1 Score: 186.4 bits (472), Expect = 5.9e-46
Identity = 102/230 (44.35%), Postives = 147/230 (63.91%), Query Frame = 1


Query: 166 NKVVANNVNEDSNAKKSSQSTKVSEKPQVNPDTKKTDAGKKEKEKKEAAPEKKKPVETET 225
           NK   +     S A+  +++ KV++K +    TK +D G+K+++KK++   K K  E + 
Sbjct: 582 NKFAGSQAERSSKAQADAEAKKVADKLK---GTKLSDGGQKKEQKKQSGGSKSKNAEVD- 641

Query: 226 ADKEKEVSVSLLNIRVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYYSPEELT 285
                 V+V+ L+IRVGLIRKA KHP ADSL VEEIDVGE   R VVSGL K+   EE+ 
Sbjct: 642 ------VTVAKLDIRVGLIRKAQKHPDADSLYVEEIDVGEEAPRTVVSGLVKFIPLEEMQ 701

Query: 286 NRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTVVEPLLPPEGANIGEQISFSGVDGKPE 345
           NR+V ++ N+KP  +R + S  +VL ASNEDHT VE + PPE A +GE+++F+G  G+PE
Sbjct: 702 NRKVCVLCNLKPVAMRGIKSHAMVLAASNEDHTKVELVEPPESAAVGERVTFAGYSGEPE 761

Query: 346 DVLNPKKKQLDKITPHLFTNDKGEATFKGIPFMTSAGPC-TSTISKGSIK 395
             LN K K  +K++  L +N +  A +K +PF TSAG C   +I+ G I+
Sbjct: 762 ASLNAKSKTWEKLSADLHSNGELVACYKDVPFTTSAGVCKVKSIASGEIR 801

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BLAST of Cucsa.143880 vs. Swiss-Prot
Match: ARC1_SCHPO (tRNA-aminoacylation cofactor arc1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC30C2.04 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.7e-43
Identity = 110/310 (35.48%), Postives = 177/310 (57.10%), Query Frame = 1


Query: 58  DNIEVTKWITFADSFPVDSKACFDVLKQLNEELAPKSVLLGKGLKPSEADVLVFSVLHPY 117
           +  ++ +W T A S P+++++   +++QL+E L   S  + +    S AD+ V++ +H Y
Sbjct: 104 EKAQILEWTTKAFS-PIETQS---IVEQLDEFLK-SSTFIAQDSGISVADLAVYARIHSY 163

Query: 118 VIGLSNAEMEKLPHVLRWMDYIQNKENFGELFQKILLQKCEFD---PPLQGNKVVANNVN 177
           + GLS  E  KL +V RW D+IQ++E+  E    + ++    D   P +Q   V+  +  
Sbjct: 164 ICGLSAKEGYKLNNVCRWFDFIQHQESVMEAANSMSMKLANIDLNAPKIQRPSVIKKDKK 223

Query: 178 EDSNAKKSSQST--KVSEKPQVNPDTKKTDAGKKEKEKKEAAPEKKKPVETETADKEKEV 237
           E    K S +++   V + P+     KK    KKEK+ K+   +KK+    E       V
Sbjct: 224 EKKEGKPSQEASVKSVEKAPKGLEGAKKEKQNKKEKKDKKDKKDKKEKAPKEPPKAATPV 283

Query: 238 SVSLLNIRVGLIRKAWKHPSADSLLVEEIDVGEAK-VRQVVSGLAKYYSPEELTNRRVVL 297
             S+++ R+G I KA KHP+ADSL V  I  G+A+  R V SGL KY   E++  R+V++
Sbjct: 284 P-SMIDFRIGFIEKAVKHPNADSLYVSTIHCGDAEGPRTVCSGLVKYIPLEQMQQRKVIV 343

Query: 298 ITNVKPGKLRDVMSEGLVLCASNEDHTVVEPLLPPEGANIGEQISFSGVD-GKPEDVLNP 357
           + N+KP  +R V S+ +V CAS+ D +VVE +LPPE A IG++++F G D  +PE  LNP
Sbjct: 344 VANLKPVNMRSVKSQAMVFCASSPDKSVVEFVLPPENAEIGDRLTFEGFDTEEPEAQLNP 403

Query: 358 KKKQLDKITP 361
           K+K  + I P
Sbjct: 404 KRKIWEAIQP 407

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BLAST of Cucsa.143880 vs. Swiss-Prot
Match: SYMC_ARATH (Methionine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana GN=At4g13780 PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 6.8e-42
Identity = 92/198 (46.46%), Postives = 133/198 (67.17%), Query Frame = 1


Query: 198 TKKTDAGKKEKEKKEAAPEKKKPVETETADKEKEVSVSLLNIRVGLIRKAWKHPSADSLL 257
           TK +DA K++   K     K +P        ++E++++ L+IRVG I KA KHP AD+L 
Sbjct: 606 TKLSDAKKQKASSKGGGKPKPQPAA------DREITMARLDIRVGKIVKAEKHPKADALY 665

Query: 258 VEEIDVGEAKVRQVVSGLAKYYSPEELTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDH 317
           VEEIDVG  ++R VVSGL KY   EE+ NR V ++ N+KP K+RD++S+ +VL AS+ D 
Sbjct: 666 VEEIDVGGGEIRTVVSGLVKYIPLEEMQNRMVCVLCNLKPAKMRDIVSQAMVLAASSSDG 725

Query: 318 TVVEPLLPPEGANIGEQISFSGVDGKPEDVLNPKKKQLDKITPHLFTNDKGEATFKGIPF 377
           + VE + PP+ ANIGE+++F G +G+P+DVLNPKKK  + +   L T +   A +K +PF
Sbjct: 726 SKVELVEPPKTANIGERVTFPGFEGEPDDVLNPKKKVWETLLVDLNTKENLVACYKDVPF 785

Query: 378 MTSAGPC-TSTISKGSIK 395
            TSAG C  S+IS G+I+
Sbjct: 786 TTSAGVCKVSSISNGTIR 797

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BLAST of Cucsa.143880 vs. Swiss-Prot
Match: AIMP1_HUMAN (Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Homo sapiens GN=AIMP1 PE=1 SV=2)

HSP 1 Score: 165.6 bits (418), Expect = 1.1e-39
Identity = 98/235 (41.70%), Postives = 139/235 (59.15%), Query Frame = 1


Query: 162 PLQGNKVVANNVNEDSNAKKSSQSTKVSEKPQVNPDTKKTDAGKKEKEKKEAAPEKKKPV 221
           PL  N +V+ NV + +     S  TK     Q+   T      K++ EKK    EKK+  
Sbjct: 85  PLHANSMVSENVIQSTAVTTVSSGTK----EQIKGGTGDEKKAKEKIEKKGEKKEKKQQS 144

Query: 222 ETETADKEKEVSVSLLNIRVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYYSP 281
              +AD  K + VS L++R+G I  A KHP ADSL VEE+DVGE   R VVSGL  +   
Sbjct: 145 IAGSADS-KPIDVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPL 204

Query: 282 EELTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTVVEPLLPPEGANIGEQISFSGVD 341
           E++ NR V+L+ N+KP K+R V+S+ +V+CAS+ +   +E L PP G+  G++I+F    
Sbjct: 205 EQMQNRMVILLCNLKPAKMRGVLSQAMVMCASSPEK--IEILAPPNGSVPGDRITFDAFP 264

Query: 342 GKPEDVLNPKKKQLDKITPHLFTNDKGEATFKGIPF-MTSAGPC-TSTISKGSIK 395
           G+P+  LNPKKK  ++I P L TND+  AT+KG+PF +   G C   T+S   IK
Sbjct: 265 GEPDKELNPKKKIWEQIQPDLHTNDECVATYKGVPFEVKGKGVCRAQTMSNSGIK 312

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BLAST of Cucsa.143880 vs. Swiss-Prot
Match: AIMP1_MOUSE (Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Mus musculus GN=Aimp1 PE=1 SV=2)

HSP 1 Score: 157.5 bits (397), Expect = 2.9e-37
Identity = 104/266 (39.10%), Postives = 149/266 (56.02%), Query Frame = 1


Query: 142 KENFGELFQKILLQ---------KCEFDPPLQGNKVVANNVNED-SNAKKSSQSTKVSEK 201
           K+   EL Q+++L          +     PLQ N   + +V +  S A  +S +TK    
Sbjct: 56  KKEIEELKQELILAEIHNGVEQVRVRLSTPLQTNCTASESVVQSPSVATTASPATK---- 115

Query: 202 PQVNPDTKKTDAGKKEKEKKEAAPEKKKPVETETADKE-KEVSVSLLNIRVGLIRKAWKH 261
                +  K    KK KEK E   EKK+  ++  A  + K +  S L++R+G I  A KH
Sbjct: 116 -----EQIKAGEEKKVKEKTEKKGEKKEKQQSAAASTDSKPIDASRLDLRIGCIVTAKKH 175

Query: 262 PSADSLLVEEIDVGEAKVRQVVSGLAKYYSPEELTNRRVVLITNVKPGKLRDVMSEGLVL 321
           P ADSL VEE+DVGEA  R VVSGL  +   E++ NR VVL+ N+KP K+R V+S+ +V+
Sbjct: 176 PDADSLYVEEVDVGEAAPRTVVSGLVNHVPLEQMQNRMVVLLCNLKPAKMRGVLSQAMVM 235

Query: 322 CASNEDHTVVEPLLPPEGANIGEQISFSGVDGKPEDVLNPKKKQLDKITPHLFTNDKGEA 381
           CAS+ +   VE L PP G+  G++I+F    G+P+  LNPKKK  ++I P L TN +  A
Sbjct: 236 CASSPEK--VEILAPPNGSVPGDRITFDAFPGEPDKELNPKKKIWEQIQPDLHTNAECVA 295

Query: 382 TFKGIPF-MTSAGPC-TSTISKGSIK 395
           T+KG PF +   G C   T++   IK
Sbjct: 296 TYKGAPFEVKGKGVCRAQTMANSGIK 310

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BLAST of Cucsa.143880 vs. TrEMBL
Match: A0A0A0KQP5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G223010 PE=4 SV=1)

HSP 1 Score: 780.8 bits (2015), Expect = 7.9e-223
Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 1


Query: 1   MVANGGSALDRKQLVASALAKHFALDHNALIGENAECDFRAYVLNILKASRNGASVDDNI 60
           MVANGGSALDRKQLVASALAKHFALDHNALIGENAECDFRAYVLNILKASRNGASVDDNI
Sbjct: 1   MVANGGSALDRKQLVASALAKHFALDHNALIGENAECDFRAYVLNILKASRNGASVDDNI 60

Query: 61  EVTKWITFADSFPVDSKACFDVLKQLNEELAPKSVLLGKGLKPSEADVLVFSVLHPYVIG 120
           EVTKWITFADSFPVDSKACFDVLKQLNEELAPKSVLLGKGLKPSEADVLVFSVLHPYVIG
Sbjct: 61  EVTKWITFADSFPVDSKACFDVLKQLNEELAPKSVLLGKGLKPSEADVLVFSVLHPYVIG 120

Query: 121 LSNAEMEKLPHVLRWMDYIQNKENFGELFQKILLQKCEFDPPLQGNKVVANNVNEDSNAK 180
           LSNAEMEKLPHVLRWMDYIQNKENFGELFQKILLQKCEFDPPLQGNKVVANNVNEDSNAK
Sbjct: 121 LSNAEMEKLPHVLRWMDYIQNKENFGELFQKILLQKCEFDPPLQGNKVVANNVNEDSNAK 180

Query: 181 KSSQSTKVSEKPQVNPDTKKTDAGKKEKEKKEAAPEKKKPVETETADKEKEVSVSLLNIR 240
           KSSQSTKVSEKPQVNPDTKKTDAGKKEKEKKEAAPEKKKPVETETADKEKEVSVSLLNIR
Sbjct: 181 KSSQSTKVSEKPQVNPDTKKTDAGKKEKEKKEAAPEKKKPVETETADKEKEVSVSLLNIR 240

Query: 241 VGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYYSPEELTNRRVVLITNVKPGKL 300
           VGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYYSPEELTNRRVVLITNVKPGKL
Sbjct: 241 VGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYYSPEELTNRRVVLITNVKPGKL 300

Query: 301 RDVMSEGLVLCASNEDHTVVEPLLPPEGANIGEQISFSGVDGKPEDVLNPKKKQLDKITP 360
           RDVMSEGLVLCASNEDHTVVEPLLPPEGANIGEQISFSGVDGKPEDVLNPKKKQLDKITP
Sbjct: 301 RDVMSEGLVLCASNEDHTVVEPLLPPEGANIGEQISFSGVDGKPEDVLNPKKKQLDKITP 360

Query: 361 HLFTNDKGEATFKGIPFMTSAGPCTSTISKGSIK 395
           HLFTNDKGEATFKGIPFMTSAGPCTSTISKGSIK
Sbjct: 361 HLFTNDKGEATFKGIPFMTSAGPCTSTISKGSIK 394

[Close]

BLAST of Cucsa.143880 vs. TrEMBL
Match: A0A061FTH7_THECC (OB-fold nucleic acid binding domain-containing protein isoform 3 OS=Theobroma cacao GN=TCM_045490 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 4.0e-142
Identity = 269/394 (68.27%), Postives = 311/394 (78.93%), Query Frame = 1


Query: 1   MVANGGSALDRKQLVASALAKHFALDHNALIGENAECDFRAYVLNILKASRNGASVDDNI 60
           M  +G +   R+QL+ S++ KHF+LD  A   E    D +   LNILK+S    S  +N 
Sbjct: 1   MATSGNNDPKRRQLIVSSICKHFSLDPKAFSSEVPGNDIKNLYLNILKSSGK-ESPKNND 60

Query: 61  EVTKWITFADSFPVDSKACFDVLKQLNEELAPKSVLLGKGLKPSEADVLVFSVLHPYVIG 120
           EV KWI FA+SFP DSKAC  VL +LN +LA KSVLLG G  PSEADV+VFS +H  VIG
Sbjct: 61  EVMKWIAFAESFPKDSKACHGVLNELNADLAQKSVLLGNGFTPSEADVIVFSAVHNSVIG 120

Query: 121 LSNAEMEKLPHVLRWMDYIQNKENFGELFQKILLQKCEFDPPLQGNKVVANNVNEDSNAK 180
           LSN+E +KLPHV+RWMDYIQ+KE+ G LFQKILL+K  F+P  Q  K  A     D NAK
Sbjct: 121 LSNSEKDKLPHVMRWMDYIQSKEDLGALFQKILLEKPGFEP--QRAKAAAKP-EIDLNAK 180

Query: 181 KSSQSTKVSEKPQVNPDTKKTDAGKKEKEKKEAAPEKKKPVETETADKEKEVSVSLLNIR 240
           K+ QSTK+++K     + KK+D+GKK K  KEA  EKKK  ETE +DK+KE+SVSLLNI+
Sbjct: 181 KTVQSTKIADKSVAEVNAKKSDSGKKAKGDKEAVQEKKKAPETEASDKDKELSVSLLNIQ 240

Query: 241 VGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYYSPEELTNRRVVLITNVKPGKL 300
           VGLI KAWKHPSADSLLVEEIDVGEAK+RQVVSGLAKY SPE+LTNRRVVLITNVKPGKL
Sbjct: 241 VGLICKAWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCSPEQLTNRRVVLITNVKPGKL 300

Query: 301 RDVMSEGLVLCASNEDHTVVEPLLPPEGANIGEQISFSGVDGKPEDVLNPKKKQLDKITP 360
           RDVMSEGLVLCASNEDHT VEPLLPPEGA  GE +SFSG+DGKP+DVLNPKKKQL+KITP
Sbjct: 301 RDVMSEGLVLCASNEDHTAVEPLLPPEGAKPGEHVSFSGIDGKPDDVLNPKKKQLEKITP 360

Query: 361 HLFTNDKGEATFKGIPFMTSAGPCTSTISKGSIK 395
           HLFT++KG ATFKGIPFMTSAGPCTS+I K SIK
Sbjct: 361 HLFTDEKGVATFKGIPFMTSAGPCTSSIPKASIK 390

[Close]

BLAST of Cucsa.143880 vs. TrEMBL
Match: A0A067JFS8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03314 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 2.6e-141
Identity = 266/389 (68.38%), Postives = 316/389 (81.23%), Query Frame = 1


Query: 2   VANGGSALDRKQLVASALAKHFALDHNALIGENAECDFRAYVLNILKASRNGASVDDNIE 61
           V +   +L RKQ VASAL+KH  L++ A +  + E + ++   NILK+S       +N E
Sbjct: 3   VVDESISLKRKQTVASALSKHLDLNYGASV--SGEDNIKSLYTNILKSSGKWLPQKENDE 62

Query: 62  VTKWITFADSFPVDSKACFDVLKQLNEELAPKSVLLGKGLKPSEADVLVFSVLHPYVIGL 121
           V KWI FA+SFP+DS+ACFD L +LN+ELAPKSV+LG GL PSE DV+VFSV+HP VI L
Sbjct: 63  VMKWIEFAESFPIDSQACFDALNRLNQELAPKSVILGNGLTPSEVDVIVFSVVHPSVIRL 122

Query: 122 SNAEMEKLPHVLRWMDYIQNKENFGELFQKILLQKCEFDPPLQGNKVVANNVNEDSNAKK 181
           S++E EKL +V+RWMDYIQNKE   +LF+KILL+K  F+P   G +  A     DSNAKK
Sbjct: 123 SHSEREKLTYVMRWMDYIQNKEELVDLFEKILLEKPLFEP--LGARDAAK-AEIDSNAKK 182

Query: 182 SSQSTKVSEKPQVNPDTKKTDAGKKEKEKKEAAPEKKKPVETETADKEKEVSVSLLNIRV 241
            SQ+TK +EK + + + KK+DAG K  E K+A  EKKKP +TE A+K+KEVSVSLLNI+V
Sbjct: 183 ISQNTKNTEKSEADKNVKKSDAGAKVTESKDAKQEKKKPPQTEPAEKDKEVSVSLLNIQV 242

Query: 242 GLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYYSPEELTNRRVVLITNVKPGKLR 301
           GLIRKAWKHPSADSLLVEEIDVGE+K+RQVVSGLAKY SP+ELTNRRVVLITNVK GKLR
Sbjct: 243 GLIRKAWKHPSADSLLVEEIDVGESKLRQVVSGLAKYCSPDELTNRRVVLITNVKSGKLR 302

Query: 302 DVMSEGLVLCASNEDHTVVEPLLPPEGANIGEQISFSGVDGKPEDVLNPKKKQLDKITPH 361
           DVMSEGLVLCASNEDH+VVEPLLPPEGA IGE+ISFSG+DGKPEDVLNPKKKQLDKITP+
Sbjct: 303 DVMSEGLVLCASNEDHSVVEPLLPPEGAKIGERISFSGIDGKPEDVLNPKKKQLDKITPN 362

Query: 362 LFTNDKGEATFKGIPFMTSAGPCTSTISK 391
           LFT+DKG AT+KGIPFMTS GPCTS+I K
Sbjct: 363 LFTDDKGVATYKGIPFMTSGGPCTSSIPK 386

[Close]

BLAST of Cucsa.143880 vs. TrEMBL
Match: M5X055_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006649mg PE=4 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 2.9e-140
Identity = 266/402 (66.17%), Postives = 319/402 (79.35%), Query Frame = 1


Query: 1   MVANGGSALDRKQLVASALAKHFALDHNALIGENAECDFRAYVLNILKASRNGASVDDNI 60
           M ANG ++LDRK+L+ASAL KHF LD        AE +  ++   ILK+++N ASV+   
Sbjct: 1   MAANGSTSLDRKRLIASALCKHFYLDPKTFPENIAEDEITSFYTTILKSAKNDASVEVQD 60

Query: 61  EVTKWITFADSFPVDSKACFDVLKQLNEELAPKSVLLGKGLKPSEADVLVFSVLHPYVIG 120
            V +WI +AD FP D +A F+VLK LN+ LA  SVLLG G  PSEADV+VF+V+H  VIG
Sbjct: 61  GVLQWIRYADGFPTDPQAFFEVLKGLNDTLADVSVLLGNGFTPSEADVIVFAVVHSSVIG 120

Query: 121 LSNAEMEKLPHVLRWMDYIQNKENFGELFQKILLQKCEFD----PPLQGNKVVANNVNED 180
           LSN++ +KLPH+LRW+D+IQNK +FG+L +KI+++K  FD      L+G K  A  V  D
Sbjct: 121 LSNSDRQKLPHLLRWVDHIQNKVDFGDLLKKIVIEKVPFDFLKLYALRGAKS-AGKVEID 180

Query: 181 SNAKKSSQSTKVSEKPQVNPDTKKTDAGKK----EKEKKEAAPEKKKPVETETADKEKEV 240
           SNAKK+ QS K ++KP+ + +TKK+DA  K    +K  K+A  EKKK  ETE  +K+KE+
Sbjct: 181 SNAKKTVQSAKSADKPEADLNTKKSDAEIKATGDKKTDKKATQEKKKSPETEAVEKDKEL 240

Query: 241 SVSLLNIRVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYYSPEELTNRRVVLI 300
           SVSLLNI+VGLIRKAWKHPSADSLLVEEIDVG+AK+RQVVSGLAKY SPEELTNR+VVLI
Sbjct: 241 SVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGDAKLRQVVSGLAKYCSPEELTNRKVVLI 300

Query: 301 TNVKPGKLRDVMSEGLVLCASNEDHTVVEPLLPPEGANIGEQISFSGVDGKPEDVLNPKK 360
           TNVKPGKLRDV SEGLVLCASNEDHT VEPLLPPEGA  GE++SFSGVDGKPEDVLNPKK
Sbjct: 301 TNVKPGKLRDVASEGLVLCASNEDHTRVEPLLPPEGARPGERVSFSGVDGKPEDVLNPKK 360

Query: 361 KQLDKITPHLFTNDKGEATFKGIPFMTSAGPCTSTISKGSIK 395
           KQL+KITPHLFT+DKG ATFKGIPFMTSAGPCTS+I K SIK
Sbjct: 361 KQLEKITPHLFTDDKGVATFKGIPFMTSAGPCTSSIPKASIK 401

[Close]

BLAST of Cucsa.143880 vs. TrEMBL
Match: D7T4B9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g03060 PE=4 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 3.8e-140
Identity = 261/386 (67.62%), Postives = 309/386 (80.05%), Query Frame = 1


Query: 9   LDRKQLVASALAKHFALDHNALIGENAECDFRAYVLNILKASRNGASVDDNIEVTKWITF 68
           L RKQ + S+L KH +LD    +    E D ++   NILK+S  G +  ++ EV+KWI+F
Sbjct: 12  LRRKQSIVSSLCKHLSLDPKIFLDSIVENDIKSLCANILKSS--GRAPKNSDEVSKWISF 71

Query: 69  ADSFPVDSKACFDVLKQLNEELAPKSVLLGKGLKPSEADVLVFSVLHPYVIGLSNAEMEK 128
           A+S+PVDSKACF  L  +NEELA KSVL+G GLKPSEADV+VFS+LHP+VIGL N E +K
Sbjct: 72  AESYPVDSKACFGALHVINEELAEKSVLMGDGLKPSEADVIVFSLLHPFVIGLPNTERQK 131

Query: 129 LPHVLRWMDYIQNKENFGELFQKILLQKCEFDPPLQGNKVVANNVNEDSNAKKSSQSTKV 188
           LPH++RWM+YIQ+KENFGELF KILL+    + P    K+V   +  D NAKK+ QSTK 
Sbjct: 132 LPHLVRWMEYIQSKENFGELFPKILLENDVIELPKP--KIVVK-LEADPNAKKTVQSTKN 191

Query: 189 SEKPQVNPDTKKTDAGKKEKEKKEAAPEKKKPVETETADKEKEVSVSLLNIRVGLIRKAW 248
           ++  + NP++KK+D  KK      AA +KKK  E E  +K+KEVS+SLLNI+VGLIRKAW
Sbjct: 192 ADNTEANPNSKKSDVVKKVTGNNAAAEQKKKLPEKEAVEKDKEVSISLLNIQVGLIRKAW 251

Query: 249 KHPSADSLLVEEIDVGEAKVRQVVSGLAKYYSPEELTNRRVVLITNVKPGKLRDVMSEGL 308
           KHPSADSLLVEEIDVG+AK+RQVVSGLAKY SPEELTNRRVVLITNVKPGKLRDVMSEGL
Sbjct: 252 KHPSADSLLVEEIDVGDAKLRQVVSGLAKYCSPEELTNRRVVLITNVKPGKLRDVMSEGL 311

Query: 309 VLCASNEDHTVVEPLLPPEGANIGEQISFSGVDGKPEDVLNPKKKQLDKITPHLFTNDKG 368
           VLCASNEDHT VEPLLPPEGA IGE++SFSG +GKPEDVLNPKKKQL+KITPHLFT+DKG
Sbjct: 312 VLCASNEDHTGVEPLLPPEGAKIGERVSFSGNEGKPEDVLNPKKKQLEKITPHLFTDDKG 371

Query: 369 EATFKGIPFMTSAGPCTSTISKGSIK 395
            ATFKGIPFMTS GPCT +I K SIK
Sbjct: 372 VATFKGIPFMTSGGPCTCSIPKASIK 392

[Close]

BLAST of Cucsa.143880 vs. TAIR10
Match: AT2G40660.1 (AT2G40660.1 Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 447.6 bits (1150), Expect = 8.0e-126
Identity = 239/390 (61.28%), Postives = 290/390 (74.36%), Query Frame = 1


Query: 12  KQLVASALAKHFALDHNALIGENAECDFRAYVLNILKASRNGASVDDNIEVTKWITFADS 71
           KQ++ SAL KHF+LD    +G   E D +    N+LKAS    S  +N +V KW+ FA+ 
Sbjct: 6   KQMILSALCKHFSLDPEPFVGGAGESDIKTLYSNVLKASGKEVSAQNN-DVLKWLDFAEG 65

Query: 72  FPVDSKACFDVLKQLNEELAPKSVLLGKGLKPSEADVLVFSVLHPYVIGLSNAEMEKLPH 131
           F  DSK  F  L++LN ELA KSVLLG GL PS ADV VFS LH  V+GLS+++ EK+PH
Sbjct: 66  FSSDSKDWFSALEKLNLELATKSVLLGNGLTPSAADVAVFSALHSSVLGLSDSDKEKVPH 125

Query: 132 VLRWMDYIQNKENFGELFQKI--LLQKCEFDPPLQGNKVVANNVNEDSNAKKSSQSTKVS 191
           V+RW++YIQNKE    LF  I   L +  F+ P    KV  N     SN+KK+++  K  
Sbjct: 126 VIRWVNYIQNKEELSTLFAPIPVKLPEFSFEVPKPAIKVETN-----SNSKKAAEGVKPV 185

Query: 192 EKPQVNPD--TKKTDAGKKEK---EKKEAAPEKKKPVETETADKEKEVSVSLLNIRVGLI 251
           +KP V P   TKKT+  + +K   ++K+A  EKKKP E E A KE E+SVSLLNI+VGLI
Sbjct: 186 DKPDVQPQLGTKKTEPEEPKKNAAKEKDAKKEKKKPAEPEPAKKEAELSVSLLNIQVGLI 245

Query: 252 RKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYYSPEELTNRRVVLITNVKPGKLRDVM 311
           RKAWKHPSADSLLVEEIDVGE KVRQVVSGLAK+ SPE+LTNR V LITNVKPGKLRDVM
Sbjct: 246 RKAWKHPSADSLLVEEIDVGEDKVRQVVSGLAKFCSPEDLTNRLVALITNVKPGKLRDVM 305

Query: 312 SEGLVLCASNEDHTVVEPLLPPEGANIGEQISFSGVDGKPEDVLNPKKKQLDKITPHLFT 371
           S+GLVLCAS+EDH+VVEPLLPP GA  GE++SFSG++GKPEDVLNPKKKQL+KITP L+T
Sbjct: 306 SQGLVLCASSEDHSVVEPLLPPAGAKPGERVSFSGIEGKPEDVLNPKKKQLEKITPGLYT 365

Query: 372 NDKGEATFKGIPFMTSAGPCTSTISKGSIK 395
           ++ G AT+KGI FMTSAGPCTS+I K +IK
Sbjct: 366 DENGVATYKGIQFMTSAGPCTSSIPKATIK 389

[Close]

BLAST of Cucsa.143880 vs. TAIR10
Match: AT4G13780.1 (AT4G13780.1 methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative)

HSP 1 Score: 172.9 bits (437), Expect = 3.8e-43
Identity = 92/198 (46.46%), Postives = 133/198 (67.17%), Query Frame = 1


Query: 198 TKKTDAGKKEKEKKEAAPEKKKPVETETADKEKEVSVSLLNIRVGLIRKAWKHPSADSLL 257
           TK +DA K++   K     K +P        ++E++++ L+IRVG I KA KHP AD+L 
Sbjct: 606 TKLSDAKKQKASSKGGGKPKPQPAA------DREITMARLDIRVGKIVKAEKHPKADALY 665

Query: 258 VEEIDVGEAKVRQVVSGLAKYYSPEELTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDH 317
           VEEIDVG  ++R VVSGL KY   EE+ NR V ++ N+KP K+RD++S+ +VL AS+ D 
Sbjct: 666 VEEIDVGGGEIRTVVSGLVKYIPLEEMQNRMVCVLCNLKPAKMRDIVSQAMVLAASSSDG 725

Query: 318 TVVEPLLPPEGANIGEQISFSGVDGKPEDVLNPKKKQLDKITPHLFTNDKGEATFKGIPF 377
           + VE + PP+ ANIGE+++F G +G+P+DVLNPKKK  + +   L T +   A +K +PF
Sbjct: 726 SKVELVEPPKTANIGERVTFPGFEGEPDDVLNPKKKVWETLLVDLNTKENLVACYKDVPF 785

Query: 378 MTSAGPC-TSTISKGSIK 395
            TSAG C  S+IS G+I+
Sbjct: 786 TTSAGVCKVSSISNGTIR 797

[Close]

BLAST of Cucsa.143880 vs. TAIR10
Match: AT3G59980.1 (AT3G59980.1 Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 114.0 bits (284), Expect = 2.1e-25
Identity = 70/181 (38.67%), Postives = 106/181 (58.56%), Query Frame = 1


Query: 213 AAPEKKKPVETETADKEKEVSVSLLNIRVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVV 272
           +A E +K  E++  ++  + + +LL+I+VG I KAW+H  ADSL VEE+D+GEA+ R + 
Sbjct: 85  SADESEKKSESQKEEENVKETANLLDIKVGRIVKAWQHEEADSLYVEEVDIGEAEPRIIC 144

Query: 273 SGLAKYYSPEELTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTVVEPLLPPEGANIG 332
           SGL KY   + L    VV++ N+KP  +R V S G++L AS+  H  VE L+PPEG+  G
Sbjct: 145 SGLVKYVPLDLLQGASVVVLANLKPRNMRGVKSCGMLLAASDAAHENVELLVPPEGSVPG 204

Query: 333 EQISFSGVDGKPEDVLNP-------KKKQLDKITPHLFTNDKGEATFKGIPFMTSAGPCT 387
           +++ F G +   E +  P       KKK  + + P L T+  G +  K     TS+G  T
Sbjct: 205 DRVWF-GNEEDLEQLPEPAPPNKVQKKKMWELVQPLLKTDASGVSMLKEHLMRTSSGLVT 264

[Close]

BLAST of Cucsa.143880 vs. NCBI nr
Match: gi|778701570|ref|XP_011655049.1| (PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 780.8 bits (2015), Expect = 1.1e-222
Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 1


Query: 1   MVANGGSALDRKQLVASALAKHFALDHNALIGENAECDFRAYVLNILKASRNGASVDDNI 60
           MVANGGSALDRKQLVASALAKHFALDHNALIGENAECDFRAYVLNILKASRNGASVDDNI
Sbjct: 1   MVANGGSALDRKQLVASALAKHFALDHNALIGENAECDFRAYVLNILKASRNGASVDDNI 60

Query: 61  EVTKWITFADSFPVDSKACFDVLKQLNEELAPKSVLLGKGLKPSEADVLVFSVLHPYVIG 120
           EVTKWITFADSFPVDSKACFDVLKQLNEELAPKSVLLGKGLKPSEADVLVFSVLHPYVIG
Sbjct: 61  EVTKWITFADSFPVDSKACFDVLKQLNEELAPKSVLLGKGLKPSEADVLVFSVLHPYVIG 120

Query: 121 LSNAEMEKLPHVLRWMDYIQNKENFGELFQKILLQKCEFDPPLQGNKVVANNVNEDSNAK 180
           LSNAEMEKLPHVLRWMDYIQNKENFGELFQKILLQKCEFDPPLQGNKVVANNVNEDSNAK
Sbjct: 121 LSNAEMEKLPHVLRWMDYIQNKENFGELFQKILLQKCEFDPPLQGNKVVANNVNEDSNAK 180

Query: 181 KSSQSTKVSEKPQVNPDTKKTDAGKKEKEKKEAAPEKKKPVETETADKEKEVSVSLLNIR 240
           KSSQSTKVSEKPQVNPDTKKTDAGKKEKEKKEAAPEKKKPVETETADKEKEVSVSLLNIR
Sbjct: 181 KSSQSTKVSEKPQVNPDTKKTDAGKKEKEKKEAAPEKKKPVETETADKEKEVSVSLLNIR 240

Query: 241 VGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYYSPEELTNRRVVLITNVKPGKL 300
           VGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYYSPEELTNRRVVLITNVKPGKL
Sbjct: 241 VGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYYSPEELTNRRVVLITNVKPGKL 300

Query: 301 RDVMSEGLVLCASNEDHTVVEPLLPPEGANIGEQISFSGVDGKPEDVLNPKKKQLDKITP 360
           RDVMSEGLVLCASNEDHTVVEPLLPPEGANIGEQISFSGVDGKPEDVLNPKKKQLDKITP
Sbjct: 301 RDVMSEGLVLCASNEDHTVVEPLLPPEGANIGEQISFSGVDGKPEDVLNPKKKQLDKITP 360

Query: 361 HLFTNDKGEATFKGIPFMTSAGPCTSTISKGSIK 395
           HLFTNDKGEATFKGIPFMTSAGPCTSTISKGSIK
Sbjct: 361 HLFTNDKGEATFKGIPFMTSAGPCTSTISKGSIK 394

[Close]

BLAST of Cucsa.143880 vs. NCBI nr
Match: gi|449457397|ref|XP_004146435.1| (PREDICTED: probable methionine--tRNA ligase isoform X2 [Cucumis sativus])

HSP 1 Score: 772.3 bits (1993), Expect = 4.0e-220
Identity = 392/394 (99.49%), Postives = 392/394 (99.49%), Query Frame = 1


Query: 1   MVANGGSALDRKQLVASALAKHFALDHNALIGENAECDFRAYVLNILKASRNGASVDDNI 60
           MVANGGSALDRKQLVASALAKHFALDHNALIGENAECDFRAYVLNILKASRNGASVDDNI
Sbjct: 1   MVANGGSALDRKQLVASALAKHFALDHNALIGENAECDFRAYVLNILKASRNGASVDDNI 60

Query: 61  EVTKWITFADSFPVDSKACFDVLKQLNEELAPKSVLLGKGLKPSEADVLVFSVLHPYVIG 120
           EVTKWITFADSFPVDSKACFDVLKQLNEELAPKSVLLGKGLKPSEADVLVFSVLHPYVIG
Sbjct: 61  EVTKWITFADSFPVDSKACFDVLKQLNEELAPKSVLLGKGLKPSEADVLVFSVLHPYVIG 120

Query: 121 LSNAEMEKLPHVLRWMDYIQNKENFGELFQKILLQKCEFDPPLQGNKVVANNVNEDSNAK 180
           LSNAEMEKLPHVLRWMDYIQNKENFGELFQKILLQKCEFDPP  GNKVVANNVNEDSNAK
Sbjct: 121 LSNAEMEKLPHVLRWMDYIQNKENFGELFQKILLQKCEFDPP--GNKVVANNVNEDSNAK 180

Query: 181 KSSQSTKVSEKPQVNPDTKKTDAGKKEKEKKEAAPEKKKPVETETADKEKEVSVSLLNIR 240
           KSSQSTKVSEKPQVNPDTKKTDAGKKEKEKKEAAPEKKKPVETETADKEKEVSVSLLNIR
Sbjct: 181 KSSQSTKVSEKPQVNPDTKKTDAGKKEKEKKEAAPEKKKPVETETADKEKEVSVSLLNIR 240

Query: 241 VGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYYSPEELTNRRVVLITNVKPGKL 300
           VGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYYSPEELTNRRVVLITNVKPGKL
Sbjct: 241 VGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYYSPEELTNRRVVLITNVKPGKL 300

Query: 301 RDVMSEGLVLCASNEDHTVVEPLLPPEGANIGEQISFSGVDGKPEDVLNPKKKQLDKITP 360
           RDVMSEGLVLCASNEDHTVVEPLLPPEGANIGEQISFSGVDGKPEDVLNPKKKQLDKITP
Sbjct: 301 RDVMSEGLVLCASNEDHTVVEPLLPPEGANIGEQISFSGVDGKPEDVLNPKKKQLDKITP 360

Query: 361 HLFTNDKGEATFKGIPFMTSAGPCTSTISKGSIK 395
           HLFTNDKGEATFKGIPFMTSAGPCTSTISKGSIK
Sbjct: 361 HLFTNDKGEATFKGIPFMTSAGPCTSTISKGSIK 392

[Close]

BLAST of Cucsa.143880 vs. NCBI nr
Match: gi|659114225|ref|XP_008456961.1| (PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 748.4 bits (1931), Expect = 6.2e-213
Identity = 376/394 (95.43%), Postives = 384/394 (97.46%), Query Frame = 1


Query: 1   MVANGGSALDRKQLVASALAKHFALDHNALIGENAECDFRAYVLNILKASRNGASVDDNI 60
           MVANGGSAL R+ LVASALAKHFALDHNALIGENAECDFR YVLNILK SRNGASVDDN 
Sbjct: 1   MVANGGSALGRRHLVASALAKHFALDHNALIGENAECDFRTYVLNILKTSRNGASVDDND 60

Query: 61  EVTKWITFADSFPVDSKACFDVLKQLNEELAPKSVLLGKGLKPSEADVLVFSVLHPYVIG 120
           EVTKWITFADSFPVDSKACFD+LKQLNEELAPKSVLLGKGLKPSEADVLVFSVLHPYVIG
Sbjct: 61  EVTKWITFADSFPVDSKACFDILKQLNEELAPKSVLLGKGLKPSEADVLVFSVLHPYVIG 120

Query: 121 LSNAEMEKLPHVLRWMDYIQNKENFGELFQKILLQKCEFDPPLQGNKVVANNVNEDSNAK 180
           LSNAEMEKLPHVLRWMDYIQNK+NFGELFQKILLQKCEF+PPLQGNKVVANNV+EDSNAK
Sbjct: 121 LSNAEMEKLPHVLRWMDYIQNKQNFGELFQKILLQKCEFNPPLQGNKVVANNVDEDSNAK 180

Query: 181 KSSQSTKVSEKPQVNPDTKKTDAGKKEKEKKEAAPEKKKPVETETADKEKEVSVSLLNIR 240
           KSSQSTKVSEKPQVNPDTKKTD GKKEKEKKEAAPEKKKPVETET DKEKEVSVSLLNI+
Sbjct: 181 KSSQSTKVSEKPQVNPDTKKTDVGKKEKEKKEAAPEKKKPVETETPDKEKEVSVSLLNIK 240

Query: 241 VGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYYSPEELTNRRVVLITNVKPGKL 300
           VGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKY SPEELTNR VVLITNVKPGKL
Sbjct: 241 VGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEELTNRHVVLITNVKPGKL 300

Query: 301 RDVMSEGLVLCASNEDHTVVEPLLPPEGANIGEQISFSGVDGKPEDVLNPKKKQLDKITP 360
           RDVMSEGLVLCASNEDHTVVEPLLPP+GA IGEQISFSGVDGKPEDVLNPKKKQLDKITP
Sbjct: 301 RDVMSEGLVLCASNEDHTVVEPLLPPKGAKIGEQISFSGVDGKPEDVLNPKKKQLDKITP 360

Query: 361 HLFTNDKGEATFKGIPFMTSAGPCTSTISKGSIK 395
           HLFTNDKGEATFKGIPFMTSAGPCTS+ISKGSIK
Sbjct: 361 HLFTNDKGEATFKGIPFMTSAGPCTSSISKGSIK 394

[Close]

BLAST of Cucsa.143880 vs. NCBI nr
Match: gi|659114227|ref|XP_008456962.1| (PREDICTED: probable methionine--tRNA ligase isoform X2 [Cucumis melo])

HSP 1 Score: 740.0 bits (1909), Expect = 2.2e-210
Identity = 374/394 (94.92%), Postives = 382/394 (96.95%), Query Frame = 1


Query: 1   MVANGGSALDRKQLVASALAKHFALDHNALIGENAECDFRAYVLNILKASRNGASVDDNI 60
           MVANGGSAL R+ LVASALAKHFALDHNALIGENAECDFR YVLNILK SRNGASVDDN 
Sbjct: 1   MVANGGSALGRRHLVASALAKHFALDHNALIGENAECDFRTYVLNILKTSRNGASVDDND 60

Query: 61  EVTKWITFADSFPVDSKACFDVLKQLNEELAPKSVLLGKGLKPSEADVLVFSVLHPYVIG 120
           EVTKWITFADSFPVDSKACFD+LKQLNEELAPKSVLLGKGLKPSEADVLVFSVLHPYVIG
Sbjct: 61  EVTKWITFADSFPVDSKACFDILKQLNEELAPKSVLLGKGLKPSEADVLVFSVLHPYVIG 120

Query: 121 LSNAEMEKLPHVLRWMDYIQNKENFGELFQKILLQKCEFDPPLQGNKVVANNVNEDSNAK 180
           LSNAEMEKLPHVLRWMDYIQNK+NFGELFQKILLQKCEF+PP  GNKVVANNV+EDSNAK
Sbjct: 121 LSNAEMEKLPHVLRWMDYIQNKQNFGELFQKILLQKCEFNPP--GNKVVANNVDEDSNAK 180

Query: 181 KSSQSTKVSEKPQVNPDTKKTDAGKKEKEKKEAAPEKKKPVETETADKEKEVSVSLLNIR 240
           KSSQSTKVSEKPQVNPDTKKTD GKKEKEKKEAAPEKKKPVETET DKEKEVSVSLLNI+
Sbjct: 181 KSSQSTKVSEKPQVNPDTKKTDVGKKEKEKKEAAPEKKKPVETETPDKEKEVSVSLLNIK 240

Query: 241 VGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYYSPEELTNRRVVLITNVKPGKL 300
           VGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKY SPEELTNR VVLITNVKPGKL
Sbjct: 241 VGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEELTNRHVVLITNVKPGKL 300

Query: 301 RDVMSEGLVLCASNEDHTVVEPLLPPEGANIGEQISFSGVDGKPEDVLNPKKKQLDKITP 360
           RDVMSEGLVLCASNEDHTVVEPLLPP+GA IGEQISFSGVDGKPEDVLNPKKKQLDKITP
Sbjct: 301 RDVMSEGLVLCASNEDHTVVEPLLPPKGAKIGEQISFSGVDGKPEDVLNPKKKQLDKITP 360

Query: 361 HLFTNDKGEATFKGIPFMTSAGPCTSTISKGSIK 395
           HLFTNDKGEATFKGIPFMTSAGPCTS+ISKGSIK
Sbjct: 361 HLFTNDKGEATFKGIPFMTSAGPCTSSISKGSIK 392

[Close]

BLAST of Cucsa.143880 vs. NCBI nr
Match: gi|802778397|ref|XP_012091136.1| (PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1 [Jatropha curcas])

HSP 1 Score: 523.1 bits (1346), Expect = 4.3e-145
Identity = 271/393 (68.96%), Postives = 321/393 (81.68%), Query Frame = 1


Query: 2   VANGGSALDRKQLVASALAKHFALDHNALIGENAECDFRAYVLNILKASRNGASVDDNIE 61
           V +   +L RKQ VASAL+KH  L++ A +  + E + ++   NILK+S       +N E
Sbjct: 3   VVDESISLKRKQTVASALSKHLDLNYGASV--SGEDNIKSLYTNILKSSGKWLPQKENDE 62

Query: 62  VTKWITFADSFPVDSKACFDVLKQLNEELAPKSVLLGKGLKPSEADVLVFSVLHPYVIGL 121
           V KWI FA+SFP+DS+ACFD L +LN+ELAPKSV+LG GL PSE DV+VFSV+HP VI L
Sbjct: 63  VMKWIEFAESFPIDSQACFDALNRLNQELAPKSVILGNGLTPSEVDVIVFSVVHPSVIRL 122

Query: 122 SNAEMEKLPHVLRWMDYIQNKENFGELFQKILLQKCEFDPPLQGNKVVANNVNEDSNAKK 181
           S++E EKL +V+RWMDYIQNKE   +LF+KILL+K  F+P LQG +  A     DSNAKK
Sbjct: 123 SHSEREKLTYVMRWMDYIQNKEELVDLFEKILLEKPLFEPLLQGARDAAK-AEIDSNAKK 182

Query: 182 SSQSTKVSEKPQVNPDTKKTDAGKKEKEKKEAAPEKKKPVETETADKEKEVSVSLLNIRV 241
            SQ+TK +EK + + + KK+DAG K  E K+A  EKKKP +TE A+K+KEVSVSLLNI+V
Sbjct: 183 ISQNTKNTEKSEADKNVKKSDAGAKVTESKDAKQEKKKPPQTEPAEKDKEVSVSLLNIQV 242

Query: 242 GLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYYSPEELTNRRVVLITNVKPGKLR 301
           GLIRKAWKHPSADSLLVEEIDVGE+K+RQVVSGLAKY SP+ELTNRRVVLITNVK GKLR
Sbjct: 243 GLIRKAWKHPSADSLLVEEIDVGESKLRQVVSGLAKYCSPDELTNRRVVLITNVKSGKLR 302

Query: 302 DVMSEGLVLCASNEDHTVVEPLLPPEGANIGEQISFSGVDGKPEDVLNPKKKQLDKITPH 361
           DVMSEGLVLCASNEDH+VVEPLLPPEGA IGE+ISFSG+DGKPEDVLNPKKKQLDKITP+
Sbjct: 303 DVMSEGLVLCASNEDHSVVEPLLPPEGAKIGERISFSGIDGKPEDVLNPKKKQLDKITPN 362

Query: 362 LFTNDKGEATFKGIPFMTSAGPCTSTISKGSIK 395
           LFT+DKG AT+KGIPFMTS GPCTS+I K SIK
Sbjct: 363 LFTDDKGVATYKGIPFMTSGGPCTSSIPKASIK 392

The following BLAST results are available for this feature:

BLAST of Cucsa.143880 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SYM_ORYSJ	5.9e-46	44.35	Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica GN=Os06g0508700...	[more]
ARC1_SCHPO	4.7e-43	35.48	tRNA-aminoacylation cofactor arc1 OS=Schizosaccharomyces pombe (strain 972 / ATC...	[more]
SYMC_ARATH	6.8e-42	46.46	Methionine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana GN=At4g13780 PE=2 S...	[more]
AIMP1_HUMAN	1.1e-39	41.70	Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Homo sa...	[more]
AIMP1_MOUSE	2.9e-37	39.10	Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Mus mus...	[more]

BLAST of Cucsa.143880 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQP5_CUCSA	7.9e-223	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G223010 PE=4 SV=1	[more]
A0A061FTH7_THECC	4.0e-142	68.27	OB-fold nucleic acid binding domain-containing protein isoform 3 OS=Theobroma ca...	[more]
A0A067JFS8_JATCU	2.6e-141	68.38	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03314 PE=4 SV=1	[more]
M5X055_PRUPE	2.9e-140	66.17	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006649mg PE=4 SV=1	[more]
D7T4B9_VITVI	3.8e-140	67.62	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g03060 PE=4 SV=...	[more]

BLAST of Cucsa.143880 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G40660.1	8.0e-126	61.28	Nucleic acid-binding, OB-fold-like protein	[more]
AT4G13780.1	3.8e-43	46.46	methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putat...	[more]
AT3G59980.1	2.1e-25	38.67	Nucleic acid-binding, OB-fold-like protein	[more]

BLAST of Cucsa.143880 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778701570\|ref\|XP_011655049.1\|	1.1e-222	100.00	PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1...	[more]
gi\|449457397\|ref\|XP_004146435.1\|	4.0e-220	99.49	PREDICTED: probable methionine--tRNA ligase isoform X2 [Cucumis sativus]	[more]
gi\|659114225\|ref\|XP_008456961.1\|	6.2e-213	95.43	PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1...	[more]
gi\|659114227\|ref\|XP_008456962.1\|	2.2e-210	94.92	PREDICTED: probable methionine--tRNA ligase isoform X2 [Cucumis melo]	[more]
gi\|802778397\|ref\|XP_012091136.1\|	4.3e-145	68.96	PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002547	tRNA-bd_dom
IPR010987	Glutathione-S-Trfase_C-like
IPR012340	NA-bd_OB-fold
IPR002547	tRNA-bd_dom
IPR010987	Glutathione-S-Trfase_C-like
IPR012340	NA-bd_OB-fold
IPR002547	tRNA-bd_dom
IPR010987	Glutathione-S-Trfase_C-like
IPR012340	NA-bd_OB-fold
IPR002547	tRNA-bd_dom
IPR010987	Glutathione-S-Trfase_C-like
IPR012340	NA-bd_OB-fold
IPR002547	tRNA-bd_dom
IPR010987	Glutathione-S-Trfase_C-like
IPR012340	NA-bd_OB-fold
IPR002547	tRNA-bd_dom
IPR012340	NA-bd_OB-fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0000049	tRNA binding
GO:0000049	tRNA binding
GO:0000049	tRNA binding
GO:0000049	tRNA binding
GO:0000049	tRNA binding
GO:0000049	tRNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0034968	histone lysine methylation
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0009791	post-embryonic development
biological_process	GO:0000338	protein deneddylation
biological_process	GO:0009220	pyrimidine ribonucleotide biosynthetic process
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0044763	single-organism cellular process
biological_process	GO:0044710	single-organism metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0000049	tRNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.143880.8	Cucsa.143880.8	mRNA
Cucsa.143880.7	Cucsa.143880.7	mRNA
Cucsa.143880.6	Cucsa.143880.6	mRNA
Cucsa.143880.5	Cucsa.143880.5	mRNA
Cucsa.143880.2	Cucsa.143880.2	mRNA
Cucsa.143880.1	Cucsa.143880.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002547	tRNA-binding domain	PFAM	PF01588	tRNA_bind	coord: 114..208 score: 3.5
IPR002547	tRNA-binding domain	PROFILE	PS50886	TRBD	coord: 108..211 score: 30
IPR012340	Nucleic acid-binding, OB-fold	GENE3D	G3DSA:2.40.50.140		coord: 109..265 score: 7.6
IPR012340	Nucleic acid-binding, OB-fold	unknown	SSF50249	Nucleic acid-binding proteins	coord: 107..260 score: 4.41
None	No IPR available	PANTHER	PTHR11586	FAMILY NOT NAMED	coord: 2..269 score: 7.6E
None	No IPR available	PANTHER	PTHR11586:SF1	NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN	coord: 2..269 score: 7.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.143880	Cla007299	Watermelon (97103) v1	cgywmB253
Cucsa.143880	Csa5G223010	Cucumber (Chinese Long) v2	cgycuB209
Cucsa.143880	MELO3C020154	Melon (DHL92) v3.5.1	cgymeB241
Cucsa.143880	ClCG07G005160	Watermelon (Charleston Gray)	cgywcgB244
Cucsa.143880	CSPI05G11610	Wild cucumber (PI 183967)	cgycpiB212
Cucsa.143880	CmaCh04G001010	Cucurbita maxima (Rimu)	cgycmaB0401
Cucsa.143880	CmoCh04G001000	Cucurbita moschata (Rifu)	cgycmoB0401
Cucsa.143880	Lsi04G010160	Bottle gourd (USVL1VR-Ls)	cgylsiB232
Cucsa.143880	Cp4.1LG01g05680	Cucurbita pepo (Zucchini)	cgycpeB0388
Cucsa.143880	MELO3C020154.2	Melon (DHL92) v3.6.1	cgymedB238
Cucsa.143880	CsaV3_5G011010	Cucumber (Chinese Long) v3	cgycucB217
Cucsa.143880	Cla97C07G133520	Watermelon (97103) v2	cgywmbB244
Cucsa.143880	Bhi07G000411	Wax gourd	cgywgoB283
Cucsa.143880	Carg24470	Silver-seed gourd	carcgyB1028

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.143880	Cucurbita pepo (Zucchini)	cgycpeB0387
Cucsa.143880	Bottle gourd (USVL1VR-Ls)	cgylsiB231
Cucsa.143880	Silver-seed gourd	carcgyB0745
Cucsa.143880	Watermelon (97103) v2	cgywmbB243
Cucsa.143880	Cucurbita maxima (Rimu)	cgycmaB0400
Cucsa.143880	Cucurbita moschata (Rifu)	cgycmoB0400