Carg24470 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24470
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Methionine--tRNA ligase
Location	Cucurbita_argyrosperma_scaffold_303 : 61352 .. 67868 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCAGTGATTGATCGACTCTCTGAGAAGAAAGAATTCTCAGCAGTTCATCGCTGAAAAGCTTGAAATGGCTGCCAATGGAGGTTCTGCGTTAGATAGGAAGCAGTTGGTCGCATCGGCGCTGGCCAAACACTTCTCCTTAGATTTTGTAAGCTTCTTCTCTCTTAACCTGCTGTCGAACGCTGTGAATCTCTGATCTTATACGGACCAATCTTCTCTCTTGTTTCACTCGACATTTATTGGTATTGGCTGCTCCATATTGTGAAATTGATTTGACTTTACGTGTCGGGGGAATAGTTCTATGCACTGTATTATTTTATGGATATGATCATGGTTTGTCTAGTTTCTCTTAGGAGTTAGATGAAGTCGTGGAATCATCTCCAGACATGAATTTTCGCAGTAAAATATGTTAATATAGTTTCCGTTGATTGCCTCATTTGTTTTTTGAAATGATTCATCCGTCCAACGATTACGAGCTTCGGTACCACTTGTTTACAATCTTTCTTTTCCGTGTTGTGCATTGTCATTGGAATTTTGTTACTGAAGTTAAATTGCTATTTGTTTCAGAGTTCATTAACCGGAGAAAGTATGGATTTTAAGACCTATGTAGTAAACCTCTTGAAAACATCAAGGAATGGTGCTTCTGTCGATGATAATGATGAGGTAAGGTCGAATATTTTTCACTATGCTGACTGTACTCGAATTTCATATCGTTAGAAATTTTTTATAGGCGCACGAATTTTCATGGAAGTGAAAAGAGTACAAATGATAAGAAAAGAATCCACCCCAATTTCACAAAGGAGATTTTCGCAAAGCTCTCCAATTGGGCAGAATTAGAAGAAACAGATCAGTTTCTAGAATCCTTTGAGAGAAGACATCAATGATAACAGTGAAAACAGTAGTGCCTCAAGAGTCATCCCAAGTTCTTTATGAGCCTTGAAGCTATACTCTTTTCTCAATCCAAACTTTACAAAGATTAGGAAAAATACAGTTTAACTGAAGAGTGTTAGCTTTTATTTTATTGGGGTCAGGGATGCCTGATGACAAGAGGGGAATAGAAAATCTCAAATATCGGTAGACCAACCAAAGTTCAAATCGAAGGTATTAAGGATTTTCTCCCAAACGTGCTTAACCAATGGACCAACCAATAAAAATTAATATGTATCCTCACAAGCAGACTTGCACCAGACACTAAGCGGGGAGCAAGAAAATATGTGGGAATTTGTGTTCTGCACTCTCTATCAAATGTAGATTCACTGCTAGAAAAGGGACCAAACGAAAGCTTTAACCTTCTGCATGCACTTAGTAGCGTCCATAGAGAAGATCTTTCTTCCCAAGGAACCTTGCCAATACATGTATTATGAAGGCCAGATATGCAGCCGTTTGAAATTTTTATGTTTTAGATTTCCCGAAGGGACATCTGATAAAATTGAAAATTTACGTTTTAGTGTAACTTTTTGTTTTATCATTACCATAACGGTTATGATGGTTGCTGCAGGTGATGAAATGGATTACATTTGCAGACAGCTTTCCTGTAGATTCTAAGGCATGCCTTGAGGTTCTCAAACAATTAAATGAAGAATTAGTTCAAAAGTCTGTACTTTTGGGTAATGGATTGAAGACATCTGAAGCTGATGTAATTGCATTTTCAGTACTACACCCTTCTGTGGTAAGCATTCTTGCATTTTATGACAAAATGTCTATATTTAAAATCATTCTTTTCTTTCAAGAATGTCATCATTTCTTCGTATAATGTATACACATTTCATTTCATGTTTTCATGCTTAGATCCTTGTTCAAATGGCCGATGGATCTTTTGCATGCGGTTCTTGGATTTCAAGGACTAGTTTTGCATAGGATTTCAAAAAATAACTTTTAGATTGACCGAAGTAGAGATTCCAGTGAGATCTGACCTTATTGATTACTGCTAGATTGGCCTTTCAACAGCAGAGAGAGAAAAGTTGCCACACATTTTAAGATGGATAGATTATATCCAGGTAGGCTACTTCTTTAATGCCTTGACGGCTTACCAATAGCATCTGAGAATATTTCTGGTTTTGATTGTTGATTCTATCGCAGACATGCAAAAATGAGTATTAATATTGGTTTTTTAGTCGTTTATTTATACTTTGAATCCACTTTTATTCTGGCTTCAATATTATTGTGGTTTAGTTCCATGACTTGAGCTAATTAATACTTGCATCATTTTGTGTTTTTAACAGAACAAAGAGAATATTGGGGAGTTGTTTCAAAAGATACAGCTAGAGAAATGCAACTTTGATCCTCCAGTAAGTGCGCAATTAATTCTTTTGCATCTGCTAGAGTTTTGCTCTTTAAGGAGCAAGGATGTTAAGTTCCAAAGTGAAAAGTATATTGTTTGCACTATCATACCATTATCATTAGAAACATCTAAGTTATGCCAAAAAATTATGTTTGGTTCACATAATATGGACTATAAATTTCCAGATCAAGTCAGCTAGTATTCTTCCCTTGTATGACCTAGCTACAATTTGACTTTGAAATTTAAATATTCGTTATTCATTGTTTTTCTCTATTCTAGTTGATTATCCTTGGGTTCTGTACCGTGTTGTCATTGTTCTTTGATTTTACCTGTTTGATGTTGTTAACTTCAAACTGCCAGTTGCTTTCACATTGTTTTCACTTCACTCTCAAATTGCAAGTTCTTGTTGGTTTCTAGTATTTGTGAATTTCGTTGTGCTTTTGCCCTGTTTTTGTGGGTTCCTCCATTTCTGGCTTAGCTGAAGCAGCAAAGCTTTTTAAGGTAGATGGATATTTCATAAAATATTTTTTTTTTCTCTCAAAAAACTAAAAGCTAGATTGATTTTTTCAAGTTTCATACAAATTCATGGAGTTTGTTCCCAAGAAGTGTGCATTTGAATTACTGATGGTTAATAACTCGCATTTTGAGAAATTCCGTTGCATGAACAAATTAAAAGTCTTATTAATTATAGTTGCAGGGCAAAGTTGTTGCCAACAATGTGGAGGAAGATTCAAACGCCAAGAAGTCTTCGCAAAGCACCAAGGTTTCAGATAAGCCTCAACTGAACCCAGACACTAAGAAAACTGATCCGGGGGTAAAGCCTACATTTCTTTATTGGCCTGCCTACTCATATTTTGGTAATATAAACTATTGAAAAAATGTTGCAAAGACCTTTATTGAAGGGAAACTGTTTTCTGTTCTATTTTTCATATCTTTTGAATAGTTTGGAGAGAATTCTCTCATCTTGTGAGAGAACATTACTTGTGCACTGTTCCAAATTTTGGGCAGAATTGGTGCTTTGATGGAATAGTGAAGGAAAGTATTTTACAGTTGTTGCATAGCCCAGCCATGGTTTTAAGAAAAAGAAATCCTTTCTTTGTGAACTTTGGTTAGAGAGGAATCAGTGAATCTTTAACAATAAAAGCAGGAGCAGGATTGATGTTTTTGAATTGGCCCTGGTTTTATTCTAATCGGTGTACACTTTCAAATTCTTTTGATAATTATACGTCCTTTATAATCAATTTTAATTGGATCAGATTATTGTGACGCCATATGGGGTATTTTGATATAGATCTTTTGGTTTCTTTTATTTTAACTTTTAATAGATTCAGTGAAAAGTTTGTTTAGAAAAAGGAAGCAAAGGAAGAAGAATGTTTTCTTTTGAACCAATATATTACTTGCACATAGTTGATAGTTCTATTTTAGTATTCAATGTATATTGACTTGTTGTGACCTGTTCAATTTCCGTGGTATAACTTGATATCCTCTAACTATTCTTTACTCCTGCCTTTTCTCATCATCATCATCTTTTTTGCAATTCATTCATTTACATATTTGTTTTTAATTTTATGAAACTGTTAGAAAAAAGAGAAGGACAAAAAAGAAGCTGCACCTGAAAAGAAGAAACCACTTGAAACAGAAACAACGGATAAAGAAAAGGAAGTTAGCGTTAGTTTGTTGAATATACGTGTTGGGCTTATTCGAAAAGCGTGGAAACATCCATCTGCTGACAGGTATGGTCAGCAATCTTCCTTCCATGTACTGCTTTCTGCGATAGCATTATTTACGTTGATCTATTGAAGTTCATTATTCTCCTCTGAGCTTAAAATTTGTATCAATCATACTGTGGTGATGATGGTTAATGATCCAGTTTGCTGGTTGAGGAGATAGATGTTGGAGAGGCCAATGTGCGGCAGGTTGTCAGTGGTCTGGCAAAGTTCTGTAGTCCAGAGGAATTGACGGTATGGTTACATTTACATGTTGGTCATGAGGAACTTGTAATGGATCCGCTGTACAAACAGAATTCAAAATTTGATGTATTATTGTATTAATCTGTGCAGAACCGCCACGTTGTTCTTATTACTAATGTAAAACCCGGAAAGCTACGAGATGTGATGTCCCAGGGATTGGTATTTTCTCTTTCCTTGGCAGTCTATTTTTTTTTTTTTTTTTTTTTTTGGACATACCATAATTGATTATTTTTGTCTTTTTTTAGGCTCCTGTACTTTACTGTGACGTATATGGATTAATATGAAGTTACCTTTCATTTTATATGTGAATACACCAAATTCTTAGCACTATTTCTCTAGTTCTGGTCTCGTTTCAGTTATTTCTTCTTACATTTTTAATGTGGACTTTGGATGTTTCATATGTTGTGTGGAAGTTGAGTTGATATGCTCACTTGTACATGGATTCATAAATCCCTCTCTCAGGTGTTATGTGCGTCTAATGAAGATCACACCATCGTGGAGCCTTTGCTTCCTCCTGAAGGAGCCAAAATTGGTGAACAAATTTCATTTGCAGGGTAAGTTTTTCAGAGATAACCCAATTTAACTGCATTACCTGACTTGCACCTCTATGAATTTTTGTGTAGAGTAGATGTTTATATATAATATACCCTTGAAGTTGTTTCAAGAATCTTTTTTCTTATCCAAAAGGGGGAAATTAGGTCTTGTCCTTGGTAAATGTAAATTCCTCCCTTTTTTCAGGATTATGTAAATCCTCGAATCATATAAACATTGGTTGGCATTCCTTCGGTGTATCATTGAGTATCTGACTGTTTTTCTTGATTGTTTTATAATTAATCTCTATTTGAATTGGGTCTCTGCTGTTATGTGGTGTATTGATTATCTCGTAATTTGATTTAGGGTTGATGGGAAGCCAGAAGATGTTCTCAATCCCAAAAAGAAACAACTGGATAAGATAACACCGGTACGTCCACTTTTAACCTTCCCTGTCCAAATAGGTTCAAAATTTTCAGGATGATGCAAAAAAAAAAAAAAACCGATTTAAATGACAAGGTCATAAAGTGGATGTTTTTTGAACAAAATAGGCAAGGTTGAACACTTGCCTTTTATTCTCTGGCTAAAGGGTCGTGGATTGTTGTGCCTTCTTAAATTGCATGCATTTAAACGTAAGAAGGGCGATTCAAAGGTCTTGTGTTGGGCAAACGAAATGAAAGCAGCAGCCAGTGTATTTGGAATAACTTTTGAAAAAAATGATTTTTAAATAATCTTTTTTTAAAAGAAAATAATAATCAATTTAACTTATGGAAGGATTTTAGATGACCAAAAGTGTTCTTTAATAAATGATAAGCACTTTAAAAATTGAATTAGTTTTAAACCTATTTTTGAAAAAACATTCGAGAGATGAACTATACATACACACACACACATATATAGAAGTCCTGGAAGTGATTAATAAAAAGAACTGCAGTAAAAAAAAAAAAAAAAAAAAAATCACATGTAGCTAATATAATCACTTTTAAATGTTGTGGATCCACTAAACGCACCTTTTATCTTGCTCTGCCAGCTGCAATCTATGCCTACTCACATCTTTCATTTTGCACCTATTATACTCAAATGGTTGTTATTTGGATGGATTCAGCATCTTTTCACCGACGACAAGGGCGTGGCGATGTACAAAGGAATACCATTCATGACATCTGCAGGAGCATGCACGTCGTCGATCCCGAAGGCAAGCATCAAATGATTGCAGCATAGCCATGGTAGAGGAGAGCTTCACAGCCAGAAGGATCCCTGAACACTGCGTTACTTGGCGAACAAAACAGAGTCACTTTTGAAGAGATTTGGCACTGGTTCATCAAATCAAATGGGCCTTCATAATTTCAGGTAATGTATCGTTGTAGTTCTTTTTGGTCTTAAAAATGACATTTTCTGATTTGAATTTATGATATTTAGAATTGACATTATGTTCGTATGATGTAAAAGGTCACATTTTTGTTTTAGATAAATCTCAATCTCCCAACAACCATATTTTGTTTATCTATCTTCGAATTACCCGTAACGATTTCAATTAATCTGTGTTTTTTTAACGTGTTTGGTAGCAGATATAGAATTTGGTTCTCAATTTAATTTCAATTGTTTATATGTATAAGCCATGAAAATAGTTGGTCGAATCTCTATTAGGCAGTAGTATAAAAGTGGGTTTGGAATTTTTTTTTATAAAAAACCTACATTTTCTGAAGGTGATTTTTGGTCACACAATTGACTAAATG

mRNA sequence

TATCAGTGATTGATCGACTCTCTGAGAAGAAAGAATTCTCAGCAGTTCATCGCTGAAAAGCTTGAAATGGCTGCCAATGGAGGTTCTGCGTTAGATAGGAAGCAGTTGGTCGCATCGGCGCTGGCCAAACACTTCTCCTTAGATTTTAGTTCATTAACCGGAGAAAGTATGGATTTTAAGACCTATGTAGTAAACCTCTTGAAAACATCAAGGAATGGTGCTTCTGTCGATGATAATGATGAGGTGATGAAATGGATTACATTTGCAGACAGCTTTCCTGTAGATTCTAAGGCATGCCTTGAGGTTCTCAAACAATTAAATGAAGAATTAGTTCAAAAGTCTGTACTTTTGGGTAATGGATTGAAGACATCTGAAGCTGATGTAATTGCATTTTCAGTACTACACCCTTCTGTGATTGGCCTTTCAACAGCAGAGAGAGAAAAGTTGCCACACATTTTAAGATGGATAGATTATATCCAGAACAAAGAGAATATTGGGGAGTTGTTTCAAAAGATACAGCTAGAGAAATGCAACTTTGATCCTCCATTGCAGGGCAAAGTTGTTGCCAACAATGTGGAGGAAGATTCAAACGCCAAGAAGTCTTCGCAAAGCACCAAGGTTTCAGATAAGCCTCAACTGAACCCAGACACTAAGAAAACTGATCCGGGGAAAAAAGAGAAGGACAAAAAAGAAGCTGCACCTGAAAAGAAGAAACCACTTGAAACAGAAACAACGGATAAAGAAAAGGAAGTTAGCGTTAGTTTGTTGAATATACGTGTTGGGCTTATTCGAAAAGCGTGGAAACATCCATCTGCTGACAGTTTGCTGGTTGAGGAGATAGATGTTGGAGAGGCCAATGTGCGGCAGGTTGTCAGTGGTCTGGCAAAGTTCTGTAGTCCAGAGGAATTGACGAACCGCCACGTTGTTCTTATTACTAATGTAAAACCCGGAAAGCTACGAGATGTGATGTCCCAGGGATTGGTGTTATGTGCGTCTAATGAAGATCACACCATCGTGGAGCCTTTGCTTCCTCCTGAAGGAGCCAAAATTGGTGAACAAATTTCATTTGCAGGGGTTGATGGGAAGCCAGAAGATGTTCTCAATCCCAAAAAGAAACAACTGGATAAGATAACACCGCATCTTTTCACCGACGACAAGGGCGTGGCGATGTACAAAGGAATACCATTCATGACATCTGCAGGAGCATGCACGTCGTCGATCCCGAAGGCAAGCATCAAATGATTGCAGCATAGCCATGGTAGAGGAGAGCTTCACAGCCAGAAGGATCCCTGAACACTGCGTTACTTGGCGAACAAAACAGAGTCACTTTTGAAGAGATTTGGCACTGGTTCATCAAATCAAATGGGCCTTCATAATTTCAGGTAATGTATCGTTGTAGTTCTTTTTGGTCTTAAAAATGACATTTTCTGATTTGAATTTATGATATTTAGAATTGACATTATGTTCGTATGATGTAAAAGGTCACATTTTTGTTTTAGATAAATCTCAATCTCCCAACAACCATATTTTGTTTATCTATCTTCGAATTACCCGTAACGATTTCAATTAATCTGTGTTTTTTTAACGTGTTTGGTAGCAGATATAGAATTTGGTTCTCAATTTAATTTCAATTGTTTATATGTATAAGCCATGAAAATAGTTGGTCGAATCTCTATTAGGCAGTAGTATAAAAGTGGGTTTGGAATTTTTTTTTATAAAAAACCTACATTTTCTGAAGGTGATTTTTGGTCACACAATTGACTAAATG

Coding sequence (CDS)

ATGGCTGCCAATGGAGGTTCTGCGTTAGATAGGAAGCAGTTGGTCGCATCGGCGCTGGCCAAACACTTCTCCTTAGATTTTAGTTCATTAACCGGAGAAAGTATGGATTTTAAGACCTATGTAGTAAACCTCTTGAAAACATCAAGGAATGGTGCTTCTGTCGATGATAATGATGAGGTGATGAAATGGATTACATTTGCAGACAGCTTTCCTGTAGATTCTAAGGCATGCCTTGAGGTTCTCAAACAATTAAATGAAGAATTAGTTCAAAAGTCTGTACTTTTGGGTAATGGATTGAAGACATCTGAAGCTGATGTAATTGCATTTTCAGTACTACACCCTTCTGTGATTGGCCTTTCAACAGCAGAGAGAGAAAAGTTGCCACACATTTTAAGATGGATAGATTATATCCAGAACAAAGAGAATATTGGGGAGTTGTTTCAAAAGATACAGCTAGAGAAATGCAACTTTGATCCTCCATTGCAGGGCAAAGTTGTTGCCAACAATGTGGAGGAAGATTCAAACGCCAAGAAGTCTTCGCAAAGCACCAAGGTTTCAGATAAGCCTCAACTGAACCCAGACACTAAGAAAACTGATCCGGGGAAAAAAGAGAAGGACAAAAAAGAAGCTGCACCTGAAAAGAAGAAACCACTTGAAACAGAAACAACGGATAAAGAAAAGGAAGTTAGCGTTAGTTTGTTGAATATACGTGTTGGGCTTATTCGAAAAGCGTGGAAACATCCATCTGCTGACAGTTTGCTGGTTGAGGAGATAGATGTTGGAGAGGCCAATGTGCGGCAGGTTGTCAGTGGTCTGGCAAAGTTCTGTAGTCCAGAGGAATTGACGAACCGCCACGTTGTTCTTATTACTAATGTAAAACCCGGAAAGCTACGAGATGTGATGTCCCAGGGATTGGTGTTATGTGCGTCTAATGAAGATCACACCATCGTGGAGCCTTTGCTTCCTCCTGAAGGAGCCAAAATTGGTGAACAAATTTCATTTGCAGGGGTTGATGGGAAGCCAGAAGATGTTCTCAATCCCAAAAAGAAACAACTGGATAAGATAACACCGCATCTTTTCACCGACGACAAGGGCGTGGCGATGTACAAAGGAATACCATTCATGACATCTGCAGGAGCATGCACGTCGTCGATCCCGAAGGCAAGCATCAAATGA

Protein sequence

MAANGGSALDRKQLVASALAKHFSLDFSSLTGESMDFKTYVVNLLKTSRNGASVDDNDEVMKWITFADSFPVDSKACLEVLKQLNEELVQKSVLLGNGLKTSEADVIAFSVLHPSVIGLSTAEREKLPHILRWIDYIQNKENIGELFQKIQLEKCNFDPPLQGKVVANNVEEDSNAKKSSQSTKVSDKPQLNPDTKKTDPGKKEKDKKEAAPEKKKPLETETTDKEKEVSVSLLNIRVGLIRKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVLITNVKPGKLRDVMSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNPKKKQLDKITPHLFTDDKGVAMYKGIPFMTSAGACTSSIPKASIK

Homology

[Close]

BLAST of Carg24470 vs. NCBI nr
Match: XP_022943002.1 (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 664.5 bits (1713), Expect = 2.3e-187
Identity = 388/391 (99.23%), Postives = 389/391 (99.49%), Query Frame = 0


Query: 1   MAANGGSALDRKQLVASALAKHFSLDFSSLTGESMDFKTYVVNLLKTSRNGASVDDNDEV 60
           MAANGGSALDRKQLVAS LAKHFSLDFSSLTGESMDFKTYVVNLLKTSRNGAS+DDNDEV
Sbjct: 1   MAANGGSALDRKQLVASVLAKHFSLDFSSLTGESMDFKTYVVNLLKTSRNGASIDDNDEV 60

Query: 61  MKWITFADSFPVDSKACLEVLKQLNEELVQKSVLLGNGLKTSEADVIAFSVLHPSVIGLS 120
           MKWITFADSFPVDSKACLEVLKQLNEELVQKSVLLGNGLKTSEADVI FSVLHPSVIGLS
Sbjct: 61  MKWITFADSFPVDSKACLEVLKQLNEELVQKSVLLGNGLKTSEADVIVFSVLHPSVIGLS 120

Query: 121 TAEREKLPHILRWIDYIQNKENIGELFQKIQLEKCNFDPPLQGKVVANNVEEDSNAKKSS 180
           TAEREKLPHILRWIDYIQNKENIGELFQKIQLEKCNFDPPLQGKVVANNVEEDSNAKKSS
Sbjct: 121 TAEREKLPHILRWIDYIQNKENIGELFQKIQLEKCNFDPPLQGKVVANNVEEDSNAKKSS 180

Query: 181 QSTKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSLLNIRVGL 240
           QSTKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSLLNIRVGL
Sbjct: 181 QSTKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSLLNIRVGL 240

Query: 241 IRKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVLITNVKPGKLRDV 300
           IRKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVLITNVKPGKLRDV
Sbjct: 241 IRKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVLITNVKPGKLRDV 300

Query: 301 MSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNPKKKQLDKITPHLF 360
           MSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNPKKKQLDKITPHLF
Sbjct: 301 MSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNPKKKQLDKITPHLF 360

Query: 361 TDDKGVAMYKGIPFMTSAGACTSSIPKASIK 392
           TDDKGVAMYKGIPFMTSAGACTSSIPKASIK
Sbjct: 361 TDDKGVAMYKGIPFMTSAGACTSSIPKASIK 391

[Close]

BLAST of Carg24470 vs. NCBI nr
Match: XP_023553860.1 (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 660.2 bits (1702), Expect = 4.3e-186
Identity = 386/391 (98.72%), Postives = 386/391 (98.72%), Query Frame = 0


Query: 1   MAANGGSALDRKQLVASALAKHFSLDFSSLTGESMDFKTYVVNLLKTSRNGASVDDNDEV 60
           MAANGGSALDRKQLVASALAKHFSLD SSLTGESMDFKTYVVNLLKTSRN ASVDDNDEV
Sbjct: 1   MAANGGSALDRKQLVASALAKHFSLDSSSLTGESMDFKTYVVNLLKTSRNRASVDDNDEV 60

Query: 61  MKWITFADSFPVDSKACLEVLKQLNEELVQKSVLLGNGLKTSEADVIAFSVLHPSVIGLS 120
           MKWITFADSFPVDSKACLEVLKQLNEELVQKSVLLGNGLKTSEADVI FSVLHPSVIGLS
Sbjct: 61  MKWITFADSFPVDSKACLEVLKQLNEELVQKSVLLGNGLKTSEADVIVFSVLHPSVIGLS 120

Query: 121 TAEREKLPHILRWIDYIQNKENIGELFQKIQLEKCNFDPPLQGKVVANNVEEDSNAKKSS 180
           TAEREKLPHILRWIDYIQNKENIGELFQKIQLEKCNFDPPLQGKVVANNVEEDSNAKKSS
Sbjct: 121 TAEREKLPHILRWIDYIQNKENIGELFQKIQLEKCNFDPPLQGKVVANNVEEDSNAKKSS 180

Query: 181 QSTKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSLLNIRVGL 240
           QSTKV  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSLLNIRVGL
Sbjct: 181 QSTKVSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSLLNIRVGL 240

Query: 241 IRKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVLITNVKPGKLRDV 300
           IRKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVLITNVKPGKLRDV
Sbjct: 241 IRKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVLITNVKPGKLRDV 300

Query: 301 MSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNPKKKQLDKITPHLF 360
           MSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNPKKKQLDKITPHLF
Sbjct: 301 MSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNPKKKQLDKITPHLF 360

Query: 361 TDDKGVAMYKGIPFMTSAGACTSSIPKASIK 392
           TDDKGVAMYKGIPFMTSAGACTSSIPKASIK
Sbjct: 361 TDDKGVAMYKGIPFMTSAGACTSSIPKASIK 391

[Close]

BLAST of Carg24470 vs. NCBI nr
Match: XP_022995904.1 (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 659.1 bits (1699), Expect = 9.6e-186
Identity = 387/391 (98.98%), Postives = 387/391 (98.98%), Query Frame = 0


Query: 1   MAANGGSALDRKQLVASALAKHFSLDFSSLTGESMDFKTYVVNLLKTSRNGASVDDNDEV 60
           MAANGGSALDRKQLVASALAKHFSLDFSSLTGESMDFKTYVVNLLKTSRNGASVDDNDEV
Sbjct: 1   MAANGGSALDRKQLVASALAKHFSLDFSSLTGESMDFKTYVVNLLKTSRNGASVDDNDEV 60

Query: 61  MKWITFADSFPVDSKACLEVLKQLNEELVQKSVLLGNGLKTSEADVIAFSVLHPSVIGLS 120
           MKWITFADSFPVDSKACLEVLKQLN ELV KSVLLGNGLKTSEADVI FSVLHPSVI LS
Sbjct: 61  MKWITFADSFPVDSKACLEVLKQLNAELVLKSVLLGNGLKTSEADVIVFSVLHPSVIALS 120

Query: 121 TAEREKLPHILRWIDYIQNKENIGELFQKIQLEKCNFDPPLQGKVVANNVEEDSNAKKSS 180
           TAEREKLPHILRWIDYIQNKENIGELFQKIQLEKCNFDPPLQGKVVANNVEEDSNAKKSS
Sbjct: 121 TAEREKLPHILRWIDYIQNKENIGELFQKIQLEKCNFDPPLQGKVVANNVEEDSNAKKSS 180

Query: 181 QSTKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSLLNIRVGL 240
           QSTKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSLLNIRVGL
Sbjct: 181 QSTKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSLLNIRVGL 240

Query: 241 IRKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVLITNVKPGKLRDV 300
           IRKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVLITNVKPGKLRDV
Sbjct: 241 IRKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVLITNVKPGKLRDV 300

Query: 301 MSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNPKKKQLDKITPHLF 360
           MSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNPKKKQLDKITPHLF
Sbjct: 301 MSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNPKKKQLDKITPHLF 360

Query: 361 TDDKGVAMYKGIPFMTSAGACTSSIPKASIK 392
           TDDKGVAMYKGIPFMTSAGACTSSIPKASIK
Sbjct: 361 TDDKGVAMYKGIPFMTSAGACTSSIPKASIK 391

[Close]

BLAST of Carg24470 vs. NCBI nr
Match: XP_022943003.1 (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X2 [Cucurbita moschata])

HSP 1 Score: 656.0 bits (1691), Expect = 8.1e-185
Identity = 380/391 (97.19%), Postives = 381/391 (97.44%), Query Frame = 0


Query: 1   MAANGGSALDRKQLVASALAKHFSLDFSSLTGESMDFKTYVVNLLKTSRNGASVDDNDEV 60
           MAANGGSALDRKQLVAS LAKHFSLDFSSLTGESMDFKTYVVNLLKTSRNGAS+DDNDEV
Sbjct: 1   MAANGGSALDRKQLVASVLAKHFSLDFSSLTGESMDFKTYVVNLLKTSRNGASIDDNDEV 60

Query: 61  MKWITFADSFPVDSKACLEVLKQLNEELVQKSVLLGNGLKTSEADVIAFSVLHPSVIGLS 120
           MKWITFADSFPVDSKACLEVLKQLNEELVQKSVLLGNGLKTSEADVI FSVLHPSVIGLS
Sbjct: 61  MKWITFADSFPVDSKACLEVLKQLNEELVQKSVLLGNGLKTSEADVIVFSVLHPSVIGLS 120

Query: 121 TAEREKLPHILRWIDYIQNKENIGELFQKIQLEKCNFDPPLQGKVVANNVEEDSNAKKSS 180
           TAEREKLPHILRWIDYIQNKENIGELFQKIQLEKCNFDPP  GKVVANNVEEDSNAKKSS
Sbjct: 121 TAEREKLPHILRWIDYIQNKENIGELFQKIQLEKCNFDPP--GKVVANNVEEDSNAKKSS 180

Query: 181 QSTKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSLLNIRVGL 240
           QSTKV      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSLLNIRVGL
Sbjct: 181 QSTKVSDKPQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSLLNIRVGL 240

Query: 241 IRKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVLITNVKPGKLRDV 300
           IRKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVLITNVKPGKLRDV
Sbjct: 241 IRKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVLITNVKPGKLRDV 300

Query: 301 MSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNPKKKQLDKITPHLF 360
           MSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNPKKKQLDKITPHLF
Sbjct: 301 MSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNPKKKQLDKITPHLF 360

Query: 361 TDDKGVAMYKGIPFMTSAGACTSSIPKASIK 392
           TDDKGVAMYKGIPFMTSAGACTSSIPKASIK
Sbjct: 361 TDDKGVAMYKGIPFMTSAGACTSSIPKASIK 389

[Close]

BLAST of Carg24470 vs. NCBI nr
Match: XP_023553867.1 (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 651.7 bits (1680), Expect = 1.5e-183
Identity = 381/391 (97.44%), Postives = 381/391 (97.44%), Query Frame = 0


Query: 1   MAANGGSALDRKQLVASALAKHFSLDFSSLTGESMDFKTYVVNLLKTSRNGASVDDNDEV 60
           MAANGGSALDRKQLVASALAKHFSLD SSLTGESMDFKTYVVNLLKTSRN ASVDDNDEV
Sbjct: 1   MAANGGSALDRKQLVASALAKHFSLDSSSLTGESMDFKTYVVNLLKTSRNRASVDDNDEV 60

Query: 61  MKWITFADSFPVDSKACLEVLKQLNEELVQKSVLLGNGLKTSEADVIAFSVLHPSVIGLS 120
           MKWITFADSFPVDSKACLEVLKQLNEELVQKSVLLGNGLKTSEADVI FSVLHPSVIGLS
Sbjct: 61  MKWITFADSFPVDSKACLEVLKQLNEELVQKSVLLGNGLKTSEADVIVFSVLHPSVIGLS 120

Query: 121 TAEREKLPHILRWIDYIQNKENIGELFQKIQLEKCNFDPPLQGKVVANNVEEDSNAKKSS 180
           TAEREKLPHILRWIDYIQNKENIGELFQKIQLEKCNFDPP  GKVVANNVEEDSNAKKSS
Sbjct: 121 TAEREKLPHILRWIDYIQNKENIGELFQKIQLEKCNFDPP--GKVVANNVEEDSNAKKSS 180

Query: 181 QSTKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSLLNIRVGL 240
           QSTKV     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSLLNIRVGL
Sbjct: 181 QSTKVSDKPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSLLNIRVGL 240

Query: 241 IRKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVLITNVKPGKLRDV 300
           IRKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVLITNVKPGKLRDV
Sbjct: 241 IRKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVLITNVKPGKLRDV 300

Query: 301 MSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNPKKKQLDKITPHLF 360
           MSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNPKKKQLDKITPHLF
Sbjct: 301 MSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNPKKKQLDKITPHLF 360

Query: 361 TDDKGVAMYKGIPFMTSAGACTSSIPKASIK 392
           TDDKGVAMYKGIPFMTSAGACTSSIPKASIK
Sbjct: 361 TDDKGVAMYKGIPFMTSAGACTSSIPKASIK 389

[Close]

BLAST of Carg24470 vs. TAIR10
Match: AT2G40660.1 (Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 402.5 bits (1033), Expect = 2.9e-112
Identity = 252/390 (64.62%), Postives = 295/390 (75.64%), Query Frame = 0


Query: 12  KQLVASALAKHFSLD---FSSLTGESMDFKTYVVNLLKTSRNGASVDDNDEVMKWITFAD 71
           KQ++ SAL KHFSLD   F    GES D KT   N+LK S    S  +ND V+KW+ FA+
Sbjct: 6   KQMILSALCKHFSLDPEPFVGGAGES-DIKTLYSNVLKASGKEVSAQNND-VLKWLDFAE 65

Query: 72  SFPVDSKACLEVLKQLNEELVQKSVLLGNGLKTSEADVIAFSVLHPSVIGLSTAEREKLP 131
            F  DSK     L++LN EL  KSVLLGNGL  S ADV  FS LH SV+GLS +++EK+P
Sbjct: 66  GFSSDSKDWFSALEKLNLELATKSVLLGNGLTPSAADVAVFSALHSSVLGLSDSDKEKVP 125

Query: 132 HILRWIDYIQNKENIGELFQKI--QLEKCNFDPPLQGKVVANNVEEDSNAKKSSQSTKV- 191
           H++RW++YIQNKE +  LF  I  +L + +F+ P      A  VE +SN+KK+++  K  
Sbjct: 126 HVIRWVNYIQNKEELSTLFAPIPVKLPEFSFEVPKP----AIKVETNSNSKKAAEGVKPV 185

Query: 192 ----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSLLNIRVGLI 251
                              XXXXXXXXXXXXXXXXXXXXXXXXXXXX+SVSLLNI+VGLI
Sbjct: 186 DKPDVQPQLGTKKTEPEEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSVSLLNIQVGLI 245

Query: 252 RKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVLITNVKPGKLRDVM 311
           RKAWKHPSADSLLVEEIDVGE  VRQVVSGLAKFCSPE+LTNR V LITNVKPGKLRDVM
Sbjct: 246 RKAWKHPSADSLLVEEIDVGEDKVRQVVSGLAKFCSPEDLTNRLVALITNVKPGKLRDVM 305

Query: 312 SQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNPKKKQLDKITPHLFT 371
           SQGLVLCAS+EDH++VEPLLPP GAK GE++SF+G++GKPEDVLNPKKKQL+KITP L+T
Sbjct: 306 SQGLVLCASSEDHSVVEPLLPPAGAKPGERVSFSGIEGKPEDVLNPKKKQLEKITPGLYT 365

Query: 372 DDKGVAMYKGIPFMTSAGACTSSIPKASIK 392
           D+ GVA YKGI FMTSAG CTSSIPKA+IK
Sbjct: 366 DENGVATYKGIQFMTSAGPCTSSIPKATIK 389

[Close]

BLAST of Carg24470 vs. TAIR10
Match: AT4G13780.1 (methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative)

HSP 1 Score: 162.5 bits (410), Expect = 5.1e-40
Identity = 83/164 (50.61%), Postives = 115/164 (70.12%), Query Frame = 0


Query: 229 VSVSLLNIRVGLIRKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVL 288
           ++++ L+IRVG I KA KHP AD+L VEEIDVG   +R VVSGL K+   EE+ NR V +
Sbjct: 634 ITMARLDIRVGKIVKAEKHPKADALYVEEIDVGGGEIRTVVSGLVKYIPLEEMQNRMVCV 693

Query: 289 ITNVKPGKLRDVMSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNPK 348
           + N+KP K+RD++SQ +VL AS+ D + VE + PP+ A IGE+++F G +G+P+DVLNPK
Sbjct: 694 LCNLKPAKMRDIVSQAMVLAASSSDGSKVELVEPPKTANIGERVTFPGFEGEPDDVLNPK 753

Query: 349 KKQLDKITPHLFTDDKGVAMYKGIPFMTSAGAC-TSSIPKASIK 392
           KK  + +   L T +  VA YK +PF TSAG C  SSI   +I+
Sbjct: 754 KKVWETLLVDLNTKENLVACYKDVPFTTSAGVCKVSSISNGTIR 797

[Close]

BLAST of Carg24470 vs. TAIR10
Match: AT3G59980.1 (Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 113.2 bits (282), Expect = 3.6e-25
Identity = 70/165 (42.42%), Postives = 98/165 (59.39%), Query Frame = 0


Query: 234 LNIRVGLIRKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVLITNVK 293
           L+I+VG I KAW+H  ADSL VEE+D+GEA  R + SGL K+   + L    VV++ N+K
Sbjct: 109 LDIKVGRIVKAWQHEEADSLYVEEVDIGEAEPRIICSGLVKYVPLDLLQGASVVVLANLK 168

Query: 294 PGKLRDVMSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNP------ 353
           P  +R V S G++L AS+  H  VE L+PPEG+  G+++ F G +   E +  P      
Sbjct: 169 PRNMRGVKSCGMLLAASDAAHENVELLVPPEGSVPGDRVWF-GNEEDLEQLPEPAPPNKV 228

Query: 354 -KKKQLDKITPHLFTDDKGVAMYKGIPFMTSAGACTS-SIPKASI 391
            KKK  + + P L TD  GV+M K     TS+G  TS S+  A+I
Sbjct: 229 QKKKMWELVQPLLKTDASGVSMLKEHLMRTSSGLVTSKSLRNANI 272

[Close]

BLAST of Carg24470 vs. Swiss-Prot
Match: sp|Q9ZTS1|SYM_ORYSJ (Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0508700 PE=2 SV=2)

HSP 1 Score: 167.2 bits (422), Expect = 3.7e-40
Identity = 88/164 (53.66%), Postives = 112/164 (68.29%), Query Frame = 0


Query: 229 VSVSLLNIRVGLIRKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVL 288
           V+V+ L+IRVGLIRKA KHP ADSL VEEIDVGE   R VVSGL KF   EE+ NR V +
Sbjct: 638 VTVAKLDIRVGLIRKAQKHPDADSLYVEEIDVGEEAPRTVVSGLVKFIPLEEMQNRKVCV 697

Query: 289 ITNVKPGKLRDVMSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNPK 348
           + N+KP  +R + S  +VL ASNEDHT VE + PPE A +GE+++FAG  G+PE  LN K
Sbjct: 698 LCNLKPVAMRGIKSHAMVLAASNEDHTKVELVEPPESAAVGERVTFAGYSGEPEASLNAK 757

Query: 349 KKQLDKITPHLFTDDKGVAMYKGIPFMTSAGAC-TSSIPKASIK 392
            K  +K++  L ++ + VA YK +PF TSAG C   SI    I+
Sbjct: 758 SKTWEKLSADLHSNGELVACYKDVPFTTSAGVCKVKSIASGEIR 801

[Close]

BLAST of Carg24470 vs. Swiss-Prot
Match: sp|Q9SVN5|SYMC_ARATH (Methionine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana OX=3702 GN=At4g13780 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 9.2e-39
Identity = 83/164 (50.61%), Postives = 115/164 (70.12%), Query Frame = 0


Query: 229 VSVSLLNIRVGLIRKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVL 288
           ++++ L+IRVG I KA KHP AD+L VEEIDVG   +R VVSGL K+   EE+ NR V +
Sbjct: 634 ITMARLDIRVGKIVKAEKHPKADALYVEEIDVGGGEIRTVVSGLVKYIPLEEMQNRMVCV 693

Query: 289 ITNVKPGKLRDVMSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNPK 348
           + N+KP K+RD++SQ +VL AS+ D + VE + PP+ A IGE+++F G +G+P+DVLNPK
Sbjct: 694 LCNLKPAKMRDIVSQAMVLAASSSDGSKVELVEPPKTANIGERVTFPGFEGEPDDVLNPK 753

Query: 349 KKQLDKITPHLFTDDKGVAMYKGIPFMTSAGAC-TSSIPKASIK 392
           KK  + +   L T +  VA YK +PF TSAG C  SSI   +I+
Sbjct: 754 KKVWETLLVDLNTKENLVACYKDVPFTTSAGVCKVSSISNGTIR 797

[Close]

BLAST of Carg24470 vs. Swiss-Prot
Match: sp|Q12904|AIMP1_HUMAN (Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Homo sapiens OX=9606 GN=AIMP1 PE=1 SV=2)

HSP 1 Score: 144.4 bits (363), Expect = 2.6e-33
Identity = 74/154 (48.05%), Postives = 103/154 (66.88%), Query Frame = 0


Query: 229 VSVSLLNIRVGLIRKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVL 288
           + VS L++R+G I  A KHP ADSL VEE+DVGE   R VVSGL      E++ NR V+L
Sbjct: 150 IDVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVIL 209

Query: 289 ITNVKPGKLRDVMSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNPK 348
           + N+KP K+R V+SQ +V+CAS+ +   +E L PP G+  G++I+F    G+P+  LNPK
Sbjct: 210 LCNLKPAKMRGVLSQAMVMCASSPEK--IEILAPPNGSVPGDRITFDAFPGEPDKELNPK 269

Query: 349 KKQLDKITPHLFTDDKGVAMYKGIPF-MTSAGAC 382
           KK  ++I P L T+D+ VA YKG+PF +   G C
Sbjct: 270 KKIWEQIQPDLHTNDECVATYKGVPFEVKGKGVC 301

[Close]

BLAST of Carg24470 vs. Swiss-Prot
Match: sp|P31230|AIMP1_MOUSE (Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Mus musculus OX=10090 GN=Aimp1 PE=1 SV=2)

HSP 1 Score: 141.0 bits (354), Expect = 2.9e-32
Identity = 75/154 (48.70%), Postives = 101/154 (65.58%), Query Frame = 0


Query: 229 VSVSLLNIRVGLIRKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVL 288
           +  S L++R+G I  A KHP ADSL VEE+DVGEA  R VVSGL      E++ NR VVL
Sbjct: 148 IDASRLDLRIGCIVTAKKHPDADSLYVEEVDVGEAAPRTVVSGLVNHVPLEQMQNRMVVL 207

Query: 289 ITNVKPGKLRDVMSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNPK 348
           + N+KP K+R V+SQ +V+CAS+ +   VE L PP G+  G++I+F    G+P+  LNPK
Sbjct: 208 LCNLKPAKMRGVLSQAMVMCASSPEK--VEILAPPNGSVPGDRITFDAFPGEPDKELNPK 267

Query: 349 KKQLDKITPHLFTDDKGVAMYKGIPF-MTSAGAC 382
           KK  ++I P L T+ + VA YKG PF +   G C
Sbjct: 268 KKIWEQIQPDLHTNAECVATYKGAPFEVKGKGVC 299

[Close]

BLAST of Carg24470 vs. Swiss-Prot
Match: sp|Q9P6K7|ARC1_SCHPO (tRNA-aminoacylation cofactor arc1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC30C2.04 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.9e-32
Identity = 134/319 (42.01%), Postives = 196/319 (61.44%), Query Frame = 0


Query: 59  EVMKWITFADSFPVDSKACLEVLKQLNEELVQKSVLLGNGLKTSEADVIAFSVLHPSVIG 118
           ++++W T A S P+++++ +E L    +E ++ S  +      S AD+  ++ +H  + G
Sbjct: 107 QILEWTTKAFS-PIETQSIVEQL----DEFLKSSTFIAQDSGISVADLAVYARIHSYICG 166

Query: 119 LSTAEREKLPHILRWIDYIQNKENIGELFQKIQLEKCNFD---PPLQ-GKVVANNVEEDS 178
           LS  E  KL ++ RW D+IQ++E++ E    + ++  N D   P +Q   V+  +     
Sbjct: 167 LSAKEGYKLNNVCRWFDFIQHQESVMEAANSMSMKLANIDLNAPKIQRPSVIKKDXXXXX 226

Query: 179 NAKKSSQSTKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSV-SL 238
                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    V S+
Sbjct: 227 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATPVPSM 286

Query: 239 LNIRVGLIRKAWKHPSADSLLVEEIDVGEA-NVRQVVSGLAKFCSPEELTNRHVVLITNV 298
           ++ R+G I KA KHP+ADSL V  I  G+A   R V SGL K+   E++  R V+++ N+
Sbjct: 287 IDFRIGFIEKAVKHPNADSLYVSTIHCGDAEGPRTVCSGLVKYIPLEQMQQRKVIVVANL 346

Query: 299 KPGKLRDVMSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVD-GKPEDVLNPKKKQ 358
           KP  +R V SQ +V CAS+ D ++VE +LPPE A+IG++++F G D  +PE  LNPK+K 
Sbjct: 347 KPVNMRSVKSQAMVFCASSPDKSVVEFVLPPENAEIGDRLTFEGFDTEEPEAQLNPKRKI 406

Query: 359 LDKITPHLFTDDKGVAMYK 371
            + I P   + +  +  YK
Sbjct: 407 WEAIQPGFTSGEDLICGYK 420

[Close]

BLAST of Carg24470 vs. TrEMBL
Match: tr|A0A1S3C4H5|A0A1S3C4H5_CUCME (aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496752 PE=4 SV=1)

HSP 1 Score: 568.5 bits (1464), Expect = 1.1e-158
Identity = 320/394 (81.22%), Postives = 345/394 (87.56%), Query Frame = 0


Query: 1   MAANGGSALDRKQLVASALAKHFSLDFSSLTGES--MDFKTYVVNLLKTSRNGASVDDND 60
           M ANGGSAL R+ LVASALAKHF+LD ++L GE+   DF+TYV+N+LKTSRNGASVDDND
Sbjct: 1   MVANGGSALGRRHLVASALAKHFALDHNALIGENAECDFRTYVLNILKTSRNGASVDDND 60

Query: 61  EVMKWITFADSFPVDSKACLEVLKQLNEELVQKSVLLGNGLKTSEADVIAFSVLHPSVIG 120
           EV KWITFADSFPVDSKAC ++LKQLNEEL  KSVLLG GLK SEADV+ FSVLHP VIG
Sbjct: 61  EVTKWITFADSFPVDSKACFDILKQLNEELAPKSVLLGKGLKPSEADVLVFSVLHPYVIG 120

Query: 121 LSTAEREKLPHILRWIDYIQNKENIGELFQKIQLEKCNFDPPLQG-KVVANNVEEDSNAK 180
           LS AE EKLPH+LRW+DYIQNK+N GELFQKI L+KC F+PPLQG KVVANNV+EDSNAK
Sbjct: 121 LSNAEMEKLPHVLRWMDYIQNKQNFGELFQKILLQKCEFNPPLQGNKVVANNVDEDSNAK 180

Query: 181 KSSQSTKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSLLNIR 240
           KSSQSTKV                 XXXXXXXXXXXXXXXXXXXXXXXXXX    LLNI+
Sbjct: 181 KSSQSTKVSEKPQVNPDTKKTDVGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNIK 240

Query: 241 VGLIRKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVLITNVKPGKL 300
           VGLIRKAWKHPSADSLLVEEIDVGEA VRQVVSGLAK+CSPEELTNRHVVLITNVKPGKL
Sbjct: 241 VGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEELTNRHVVLITNVKPGKL 300

Query: 301 RDVMSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNPKKKQLDKITP 360
           RDVMS+GLVLCASNEDHT+VEPLLPP+GAKIGEQISF+GVDGKPEDVLNPKKKQLDKITP
Sbjct: 301 RDVMSEGLVLCASNEDHTVVEPLLPPKGAKIGEQISFSGVDGKPEDVLNPKKKQLDKITP 360

Query: 361 HLFTDDKGVAMYKGIPFMTSAGACTSSIPKASIK 392
           HLFT+DKG A +KGIPFMTSAG CTSSI K SIK
Sbjct: 361 HLFTNDKGEATFKGIPFMTSAGPCTSSISKGSIK 394

[Close]

BLAST of Carg24470 vs. TrEMBL
Match: tr|A0A1S3C4E3|A0A1S3C4E3_CUCME (probable methionine--tRNA ligase isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496752 PE=4 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 1.1e-156
Identity = 317/393 (80.66%), Postives = 342/393 (87.02%), Query Frame = 0


Query: 1   MAANGGSALDRKQLVASALAKHFSLDFSSLTGES--MDFKTYVVNLLKTSRNGASVDDND 60
           M ANGGSAL R+ LVASALAKHF+LD ++L GE+   DF+TYV+N+LKTSRNGASVDDND
Sbjct: 1   MVANGGSALGRRHLVASALAKHFALDHNALIGENAECDFRTYVLNILKTSRNGASVDDND 60

Query: 61  EVMKWITFADSFPVDSKACLEVLKQLNEELVQKSVLLGNGLKTSEADVIAFSVLHPSVIG 120
           EV KWITFADSFPVDSKAC ++LKQLNEEL  KSVLLG GLK SEADV+ FSVLHP VIG
Sbjct: 61  EVTKWITFADSFPVDSKACFDILKQLNEELAPKSVLLGKGLKPSEADVLVFSVLHPYVIG 120

Query: 121 LSTAEREKLPHILRWIDYIQNKENIGELFQKIQLEKCNFDPPLQGKVVANNVEEDSNAKK 180
           LS AE EKLPH+LRW+DYIQNK+N GELFQKI L+KC F+PP   KVVANNV+EDSNAKK
Sbjct: 121 LSNAEMEKLPHVLRWMDYIQNKQNFGELFQKILLQKCEFNPP-GNKVVANNVDEDSNAKK 180

Query: 181 SSQSTKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSLLNIRV 240
           SSQSTKV                 XXXXXXXXXXXXXXXXXXXXXXXXXX    LLNI+V
Sbjct: 181 SSQSTKVSEKPQVNPDTKKTDVGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNIKV 240

Query: 241 GLIRKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVLITNVKPGKLR 300
           GLIRKAWKHPSADSLLVEEIDVGEA VRQVVSGLAK+CSPEELTNRHVVLITNVKPGKLR
Sbjct: 241 GLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEELTNRHVVLITNVKPGKLR 300

Query: 301 DVMSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNPKKKQLDKITPH 360
           DVMS+GLVLCASNEDHT+VEPLLPP+GAKIGEQISF+GVDGKPEDVLNPKKKQLDKITPH
Sbjct: 301 DVMSEGLVLCASNEDHTVVEPLLPPKGAKIGEQISFSGVDGKPEDVLNPKKKQLDKITPH 360

Query: 361 LFTDDKGVAMYKGIPFMTSAGACTSSIPKASIK 392
           LFT+DKG A +KGIPFMTSAG CTSSI K SIK
Sbjct: 361 LFTNDKGEATFKGIPFMTSAGPCTSSISKGSIK 392

[Close]

BLAST of Carg24470 vs. TrEMBL
Match: tr|A0A0A0KQP5|A0A0A0KQP5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G223010 PE=4 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 1.1e-156
Identity = 324/394 (82.23%), Postives = 343/394 (87.06%), Query Frame = 0


Query: 1   MAANGGSALDRKQLVASALAKHFSLDFSSLTGES--MDFKTYVVNLLKTSRNGASVDDND 60
           M ANGGSALDRKQLVASALAKHF+LD ++L GE+   DF+ YV+N+LK SRNGASVDDN 
Sbjct: 1   MVANGGSALDRKQLVASALAKHFALDHNALIGENAECDFRAYVLNILKASRNGASVDDNI 60

Query: 61  EVMKWITFADSFPVDSKACLEVLKQLNEELVQKSVLLGNGLKTSEADVIAFSVLHPSVIG 120
           EV KWITFADSFPVDSKAC +VLKQLNEEL  KSVLLG GLK SEADV+ FSVLHP VIG
Sbjct: 61  EVTKWITFADSFPVDSKACFDVLKQLNEELAPKSVLLGKGLKPSEADVLVFSVLHPYVIG 120

Query: 121 LSTAEREKLPHILRWIDYIQNKENIGELFQKIQLEKCNFDPPLQG-KVVANNVEEDSNAK 180
           LS AE EKLPH+LRW+DYIQNKEN GELFQKI L+KC FDPPLQG KVVANNV EDSNAK
Sbjct: 121 LSNAEMEKLPHVLRWMDYIQNKENFGELFQKILLQKCEFDPPLQGNKVVANNVNEDSNAK 180

Query: 181 KSSQSTKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSLLNIR 240
           KSSQSTKV              XXXXXXXXXXXXXXXXXXXXXXXXXXXXX    LLNIR
Sbjct: 181 KSSQSTKVSEKPQVNPDTKKTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNIR 240

Query: 241 VGLIRKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVLITNVKPGKL 300
           VGLIRKAWKHPSADSLLVEEIDVGEA VRQVVSGLAK+ SPEELTNR VVLITNVKPGKL
Sbjct: 241 VGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYYSPEELTNRRVVLITNVKPGKL 300

Query: 301 RDVMSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNPKKKQLDKITP 360
           RDVMS+GLVLCASNEDHT+VEPLLPPEGA IGEQISF+GVDGKPEDVLNPKKKQLDKITP
Sbjct: 301 RDVMSEGLVLCASNEDHTVVEPLLPPEGANIGEQISFSGVDGKPEDVLNPKKKQLDKITP 360

Query: 361 HLFTDDKGVAMYKGIPFMTSAGACTSSIPKASIK 392
           HLFT+DKG A +KGIPFMTSAG CTS+I K SIK
Sbjct: 361 HLFTNDKGEATFKGIPFMTSAGPCTSTISKGSIK 394

[Close]

BLAST of Carg24470 vs. TrEMBL
Match: tr|A0A2P4JJU0|A0A2P4JJU0_QUESU (Putative methionine--trna ligase OS=Quercus suber OX=58331 GN=CFP56_55206 PE=4 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 1.4e-132
Identity = 282/393 (71.76%), Postives = 319/393 (81.17%), Query Frame = 0


Query: 1   MAANGGSALDRKQLVASALAKHFSLDFSSLTGE--SMDFKTYVVNLLKTSRNGASVDDND 60
           MAANG   LDR Q +  +L KH SLD   L+ +    D K+  +N+LK+S  GA ++DND
Sbjct: 1   MAANGSFNLDRNQKIVLSLCKHLSLDPKILSDDVKENDIKSLYLNILKSS--GAPLNDND 60

Query: 61  EVMKWITFADSFPVDSKACLEVLKQLNEELVQKSVLLGNGLKTSEADVIAFSVLHPSVIG 120
           EVMKWITFA+SFP+DSK+C  VL  LN++L QKSVLLGNGLK SEADVI F+VLHP +IG
Sbjct: 61  EVMKWITFAESFPLDSKSCSGVLSGLNDDLAQKSVLLGNGLKPSEADVIVFAVLHPLLIG 120

Query: 121 LSTAEREKLPHILRWIDYIQNKENIGELFQKIQLEKCNFDPPLQGKVVANNVEEDSNAKK 180
           L  AE+EKL H+LRW+DYIQNKE+ GELF+KI LEK  F+P  QG      VE DS+AKK
Sbjct: 121 LPNAEKEKLSHVLRWVDYIQNKEDFGELFEKILLEKAKFEP--QGATNTVKVEVDSDAKK 180

Query: 181 SSQSTKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSLLNIRV 240
           + QSTK               XXXXXXXXXXXXXXXXXXXXXXXXXXX  +SVSLLNI+V
Sbjct: 181 TLQSTKSADKSVAAMNPKKKDXXXXXXXXXXXXXXXXXXXXXXXXXXXKDISVSLLNIQV 240

Query: 241 GLIRKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVLITNVKPGKLR 300
           GLI KAWKHPSADSLLVEEIDVG+A  RQVVSGLAKFC+P++L NR VVLITNVKPG LR
Sbjct: 241 GLIHKAWKHPSADSLLVEEIDVGDAKPRQVVSGLAKFCNPDDLKNRRVVLITNVKPGNLR 300

Query: 301 DVMSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNPKKKQLDKITPH 360
           DVMS+GLVLCASNEDHTIVEPLLPPEGAKIGE+ISF+G+DGKPEDVLNPKKKQL+KITPH
Sbjct: 301 DVMSEGLVLCASNEDHTIVEPLLPPEGAKIGERISFSGIDGKPEDVLNPKKKQLEKITPH 360

Query: 361 LFTDDKGVAMYKGIPFMTSAGACTSSIPKASIK 392
           LFTDDKGVA +KGIPFMTS G CTSSIPKASIK
Sbjct: 361 LFTDDKGVATFKGIPFMTSGGPCTSSIPKASIK 389

[Close]

BLAST of Carg24470 vs. TrEMBL
Match: tr|A0A2P5BN75|A0A2P5BN75_9ROSA (Ribosomal protein OS=Trema orientalis OX=63057 GN=TorRG33x02_315350 PE=4 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 9.3e-129
Identity = 265/393 (67.43%), Postives = 312/393 (79.39%), Query Frame = 0


Query: 9   LDRKQLVASALAKHFSLDFSSLTGESM--DFKTYVVNLLKTSRNGASVDDNDEVMKWITF 68
           L R +L+ SAL+KH SLD +   G+ +  D K+ + N+LK+S+NG   ++ND++ KWI F
Sbjct: 4   LSRNKLIVSALSKHLSLDSNQFLGDVLENDIKS-LYNILKSSKNGTPPENNDQITKWIAF 63

Query: 69  ADSFPVDSKACLEVLKQLNEELVQKSVLLGNGLKTSEADVIAFSVLHPSVIGLSTAEREK 128
           A++FP DS A  EVLK LNE+LV  SVLLGNGLK S+ DVI FSV+H SVIGLS ++REK
Sbjct: 64  AENFPTDSGASFEVLKGLNEDLVPISVLLGNGLKPSDVDVIVFSVIHSSVIGLSKSDREK 123

Query: 129 LPHILRWIDYIQNKENIGELFQKIQLEKCNFDPPLQGKVVANNVEEDSNAKKSSQSTK-- 188
           LPH+LRW+DYIQNK ++G+ F+KIQLEK  F+P  QG    + VE +S AKK+++STK  
Sbjct: 124 LPHLLRWVDYIQNKVDLGDAFEKIQLEKAKFEP--QGTKALDKVEIESGAKKTAESTKNA 183

Query: 189 ------VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSLLNIRV 248
                 VXXXXXXXXXXXXXXXXXXXX                       VSVSLLNI+V
Sbjct: 184 DKLEAEVXXXXXXXXXXXXXXXXXXXXANKEATQEKKKAPEAETVENEKEVSVSLLNIQV 243

Query: 249 GLIRKAWKHPSADSLLVEEIDVGEANVRQVVSGLAKFCSPEELTNRHVVLITNVKPGKLR 308
           GLI KAWKHPSADSLLVEEIDVGE  +RQVVSGLAK+C+PE+LTNR VVLITNVKPGKLR
Sbjct: 244 GLISKAWKHPSADSLLVEEIDVGEGKLRQVVSGLAKYCTPEQLTNRRVVLITNVKPGKLR 303

Query: 309 DVMSQGLVLCASNEDHTIVEPLLPPEGAKIGEQISFAGVDGKPEDVLNPKKKQLDKITPH 368
           DVMS+GLVLCASNEDHTIVEPLLPPEG+K+GE++SFAG+DGKPEDVLNPKKKQLDKITPH
Sbjct: 304 DVMSEGLVLCASNEDHTIVEPLLPPEGSKVGERVSFAGIDGKPEDVLNPKKKQLDKITPH 363

Query: 369 LFTDDKGVAMYKGIPFMTSAGACTSSIPKASIK 392
           LFTDDKGVA +KGIPF+TSAG CTSSIPKASIK
Sbjct: 364 LFTDDKGVATFKGIPFLTSAGPCTSSIPKASIK 393

The following BLAST results are available for this feature:

BLAST of Carg24470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943002.1	2.3e-187	99.23	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1...	[more]
XP_023553860.1	4.3e-186	98.72	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1...	[more]
XP_022995904.1	9.6e-186	98.98	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1...	[more]
XP_022943003.1	8.1e-185	97.19	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X2...	[more]
XP_023553867.1	1.5e-183	97.44	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X2...	[more]

BLAST of Carg24470 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G40660.1	2.9e-112	64.62	Nucleic acid-binding, OB-fold-like protein	[more]
AT4G13780.1	5.1e-40	50.61	methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS,...	[more]
AT3G59980.1	3.6e-25	42.42	Nucleic acid-binding, OB-fold-like protein	[more]

BLAST of Carg24470 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ZTS1\|SYM_ORYSJ	3.7e-40	53.66	Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica OX=39947 GN=Os0...	[more]
sp\|Q9SVN5\|SYMC_ARATH	9.2e-39	50.61	Methionine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana OX=3702 GN=At4g1378...	[more]
sp\|Q12904\|AIMP1_HUMAN	2.6e-33	48.05	Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Homo sa...	[more]
sp\|P31230\|AIMP1_MOUSE	2.9e-32	48.70	Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Mus mus...	[more]
sp\|Q9P6K7\|ARC1_SCHPO	2.9e-32	42.01	tRNA-aminoacylation cofactor arc1 OS=Schizosaccharomyces pombe (strain 972 / ATC...	[more]

BLAST of Carg24470 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C4H5\|A0A1S3C4H5_CUCME	1.1e-158	81.22	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1...	[more]
tr\|A0A1S3C4E3\|A0A1S3C4E3_CUCME	1.1e-156	80.66	probable methionine--tRNA ligase isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496...	[more]
tr\|A0A0A0KQP5\|A0A0A0KQP5_CUCSA	1.1e-156	82.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G223010 PE=4 SV=1	[more]
tr\|A0A2P4JJU0\|A0A2P4JJU0_QUESU	1.4e-132	71.76	Putative methionine--trna ligase OS=Quercus suber OX=58331 GN=CFP56_55206 PE=4 S...	[more]
tr\|A0A2P5BN75\|A0A2P5BN75_9ROSA	9.3e-129	67.43	Ribosomal protein OS=Trema orientalis OX=63057 GN=TorRG33x02_315350 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0000049	tRNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036282	Glutathione-S-Trfase_C_sf
IPR012340	NA-bd_OB-fold
IPR002547	tRNA-bd_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0000049	tRNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24470-RA	Carg24470-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.20.1050.130		coord: 15..158 e-value: 2.3E-13 score: 52.3
None	No IPR available	GENE3D	G3DSA:2.40.50.140		coord: 225..391 e-value: 1.4E-53 score: 183.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..226
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..226
None	No IPR available	PANTHER	PTHR11586:SF31	NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN	coord: 9..391
None	No IPR available	PANTHER	PTHR11586	FAMILY NOT NAMED	coord: 9..391
None	No IPR available	CDD	cd02799	tRNA_bind_EMAP-II_like	coord: 229..333 e-value: 1.54739E-54 score: 176.65
None	No IPR available	CDD	cd10304	GST_C_Arc1p_N_like	coord: 57..152 e-value: 6.88089E-32 score: 115.932
IPR002547	tRNA-binding domain	PFAM	PF01588	tRNA_bind	coord: 236..330 e-value: 2.9E-26 score: 91.3
IPR002547	tRNA-binding domain	PROSITE	PS50886	TRBD	coord: 230..333 score: 29.494
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	SSF50249	Nucleic acid-binding proteins	coord: 232..378
IPR036282	Glutathione S-transferase, C-terminal domain superfamily	SUPERFAMILY	SSF47616	GST C-terminal domain-like	coord: 40..148

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24470	Cla007299	Watermelon (97103) v1	carwmB0910
Carg24470	Csa5G223010	Cucumber (Chinese Long) v2	carcuB0926
Carg24470	MELO3C020154	Melon (DHL92) v3.5.1	carmeB0895
Carg24470	ClCG07G005160	Watermelon (Charleston Gray)	carwcgB0887
Carg24470	CSPI05G11610	Wild cucumber (PI 183967)	carcpiB0947
Carg24470	Cucsa.143880	Cucumber (Gy14) v1	carcgyB1028
Carg24470	CmaCh04G001010	Cucurbita maxima (Rimu)	carcmaB1249
Carg24470	CmoCh04G001000	Cucurbita moschata (Rifu)	carcmoB1219
Carg24470	Lsi04G010160	Bottle gourd (USVL1VR-Ls)	carlsiB828
Carg24470	Cp4.1LG01g05680	Cucurbita pepo (Zucchini)	carcpeB1258
Carg24470	CsGy5G008870	Cucumber (Gy14) v2	carcgybB0898
Carg24470	MELO3C020154.2	Melon (DHL92) v3.6.1	carmedB0903
Carg24470	CsaV3_5G011010	Cucumber (Chinese Long) v3	carcucB0948
Carg24470	Cla97C07G133520	Watermelon (97103) v2	carwmbB0953
Carg24470	Bhi07G000411	Wax gourd	carwgoB1053

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg24470	Silver-seed gourd	carcarB570
Carg24470	Cucurbita maxima (Rimu)	carcmaB1250
Carg24470	Cucurbita moschata (Rifu)	carcmoB1220
Carg24470	Cucurbita pepo (Zucchini)	carcpeB1259