Cucsa.137640 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCAGTAGTTTTCAACATTGGTTCAAAAATTGGCAAGAGCTTCGAAAGCATAAGTTAACAGCAAGTACTTTTGCTGGGGCAATTGGGTTTTGGCCTCGTCGAAGGACTCAACTATGGTTGGAGAAACTTGGGGCAATTGATCAATTTTGTGGTAATCTTGCTACTTGTTGGAGTAATATGAAAGAAGAAGAAGCACTCGAAAGATACAAGCTTATTACTGGAAACTCTGTTTTGTTTCCTGAATTTCAAGTCTATGGTAAAGCAAACTCGGAAGATGATTGGTTGGCTGCTTCACCTGATGGTGCAATTGATAAAATGGTTTATGGATTGCCTTCACGAGGTGTATTGGAGATTAAGTGCCCATTTTTTAACGGTGATTTGAGAAATGCTTTACCATGGTCACGAGTCCCTCGTTACTGTATTCCTCAGGCTCAAGGTTTGATGGAAATAATGGATAGGGATTGGATGGACTTTTATGTTTGGACTCCTAACGGTAGTAGTTTGTTTAGATTGTATCGAGATCCCGAATATTGGGATGTCTTGAAGATTGCTTTGTCGGATTTTTGGTGGAAGCATGTTCAACCTGCAAGGGAGATGTGTAGTAAATATGTCATTACAAATCCCCTCGTTGAGCTTAAGTCTCTTAGGCCGTCACCCAGGCATGAACTGTGTAGTTATATAGTTTGTGAGAGCAAACGGGTTGTCAATAATTCTAAGTTGCTCTTGCGTGAATTTGATGGGAGACTTCAAACCTAATTCATTGCAATCAATGGCTAAGCTTACAGTAAGGAATCTCAAACTCGAGCTTGAAGGGAGTTCTTGTTAACTCGAAAATTGCGGAATCTAACAATGATGTGAATGTTGTCAAACCAAGCACATCTCAAGTTTGACTACTACCCTTTTGCATCCATTGTTGACCCCCAGCCACGTGCTAGGGAAGTCCATCATTGCTTAGAGACATATTGAACATGCCGTGACACATATATCAGTCCCAATTCTAACTTCATTGGTGTGTAAGGATATGGTAGCAGCATGAAATGCAAAGGGCCATGGGGGAAGGTAAGCCTTTGGACTTCTGTTTGAAGGCTATTGATAATAGAAAAATCTGAACAC TCCAGTAGTTTTCAACATTGGTTCAAAAATTGGCAAGAGCTTCGAAAGCATAAGTTAACAGCAAGTACTTTTGCTGGGGCAATTGGGTTTTGGCCTCGTCGAAGGACTCAACTATGGTTGGAGAAACTTGGGGCAATTGATCAATTTTGTGGTAATCTTGCTACTTGTTGGAGTAATATGAAAGAAGAAGAAGCACTCGAAAGATACAAGCTTATTACTGGAAACTCTGTTTTGTTTCCTGAATTTCAAGTCTATGGTAAAGCAAACTCGGAAGATGATTGGTTGGCTGCTTCACCTGATGGTGCAATTGATAAAATGGTTTATGGATTGCCTTCACGAGGTGTATTGGAGATTAAGTGCCCATTTTTTAACGGTGATTTGAGAAATGCTTTACCATGGTCACGAGTCCCTCGTTACTGTATTCCTCAGGCTCAAGGTTTGATGGAAATAATGGATAGGGATTGGATGGACTTTTATGTTTGGACTCCTAACGGTAGTAGTTTGTTTAGATTGTATCGAGATCCCGAATATTGGGATGTCTTGAAGATTGCTTTGTCGGATTTTTGGTGGAAGCATGTTCAACCTGCAAGGGAGATGTGTAGTAAATATGTCATTACAAATCCCCTCGTTGAGCTTAAGTCTCTTAGGCCGTCACCCAGGCATGAACTGTGTAGTTATATAGTTTGTGAGAGCAAACGGGTTGTCAATAATTCTAAGTTGCTCTTGCGTGAATTTGATGGGAGACTTCAAACCTAATTCATTGCAATCAATGGCTAAGCTTACAGTAAGGAATCTCAAACTCGAGCTTGAAGGGAGTTCTTGTTAACTCGAAAATTGCGGAATCTAACAATGATGTGAATGTTGTCAAACCAAGCACATCTCAAGTTTGACTACTACCCTTTTGCATCCATTGTTGACCCCCAGCCACGTGCTAGGGAAGTCCATCATTGCTTAGAGACATATTGAACATGCCGTGACACATATATCAGTCCCAATTCTAACTTCATTGGTGTGTAAGGATATGGTAGCAGCATGAAATGCAAAGGGCCATGGGGGAAGGTAAGCCTTTGGACTTCTGTTTGAAGGCTATTGATAATAGAAAAATCTGAACAC ATGAAAGAAGAAGAAGCACTCGAAAGATACAAGCTTATTACTGGAAACTCTGTTTTGTTTCCTGAATTTCAAGTCTATGGTAAAGCAAACTCGGAAGATGATTGGTTGGCTGCTTCACCTGATGGTGCAATTGATAAAATGGTTTATGGATTGCCTTCACGAGGTGTATTGGAGATTAAGTGCCCATTTTTTAACGGTGATTTGAGAAATGCTTTACCATGGTCACGAGTCCCTCGTTACTGTATTCCTCAGGCTCAAGGTTTGATGGAAATAATGGATAGGGATTGGATGGACTTTTATGTTTGGACTCCTAACGGTAGTAGTTTGTTTAGATTGTATCGAGATCCCGAATATTGGGATGTCTTGAAGATTGCTTTGTCGGATTTTTGGTGGAAGCATGTTCAACCTGCAAGGGAGATGTGTAGTAAATATGTCATTACAAATCCCCTCGTTGAGCTTAAGTCTCTTAGGCCGTCACCCAGGCATGAACTGTGTAGTTATATAGTTTGTGAGAGCAAACGGGTTGTCAATAATTCTAAGTTGCTCTTGCGTGAATTTGATGGGAGACTTCAAACCTAA MKEEEALERYKLITGNSVLFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDLRNALPWSRVPRYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDFWWKHVQPAREMCSKYVITNPLVELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQT*
BLAST of Cucsa.137640 vs. TrEMBL
Match: A0A0A0KG47_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G405910 PE=4 SV=1) HSP 1 Score: 406.8 bits (1044), Expect = 1.5e-110 Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 1
BLAST of Cucsa.137640 vs. TrEMBL
Match: A0A0A0K4T5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G302370 PE=4 SV=1) HSP 1 Score: 396.7 bits (1018), Expect = 1.6e-107 Identity = 186/192 (96.88%), Postives = 189/192 (98.44%), Query Frame = 1
BLAST of Cucsa.137640 vs. TrEMBL
Match: A0A061F0P2_THECC (DNA-directed RNA polymerase subunit beta OS=Theobroma cacao GN=TCM_025578 PE=4 SV=1) HSP 1 Score: 332.4 bits (851), Expect = 3.6e-88 Identity = 152/191 (79.58%), Postives = 172/191 (90.05%), Query Frame = 1
BLAST of Cucsa.137640 vs. TrEMBL
Match: M5XB27_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024412mg PE=4 SV=1) HSP 1 Score: 330.1 bits (845), Expect = 1.8e-87 Identity = 146/190 (76.84%), Postives = 173/190 (91.05%), Query Frame = 1
BLAST of Cucsa.137640 vs. TrEMBL
Match: F6I2K8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0013g00380 PE=4 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 6.4e-85 Identity = 151/191 (79.06%), Postives = 168/191 (87.96%), Query Frame = 1
BLAST of Cucsa.137640 vs. TAIR10
Match: AT1G13810.1 (AT1G13810.1 Restriction endonuclease, type II-like superfamily protein) HSP 1 Score: 199.5 bits (506), Expect = 1.9e-51 Identity = 96/189 (50.79%), Postives = 125/189 (66.14%), Query Frame = 1
BLAST of Cucsa.137640 vs. TAIR10
Match: AT1G67660.1 (AT1G67660.1 Restriction endonuclease, type II-like superfamily protein) HSP 1 Score: 147.1 bits (370), Expect = 1.1e-35 Identity = 75/183 (40.98%), Postives = 104/183 (56.83%), Query Frame = 1
BLAST of Cucsa.137640 vs. NCBI nr
Match: gi|700192625|gb|KGN47829.1| (hypothetical protein Csa_6G405910 [Cucumis sativus]) HSP 1 Score: 406.8 bits (1044), Expect = 2.2e-110 Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 1
BLAST of Cucsa.137640 vs. NCBI nr
Match: gi|778722290|ref|XP_004149919.2| (PREDICTED: uncharacterized protein LOC101207616 [Cucumis sativus]) HSP 1 Score: 406.8 bits (1044), Expect = 2.2e-110 Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 1
BLAST of Cucsa.137640 vs. NCBI nr
Match: gi|659113272|ref|XP_008456487.1| (PREDICTED: uncharacterized protein LOC103496427 [Cucumis melo]) HSP 1 Score: 397.5 bits (1020), Expect = 1.3e-107 Identity = 185/192 (96.35%), Postives = 190/192 (98.96%), Query Frame = 1
BLAST of Cucsa.137640 vs. NCBI nr
Match: gi|700189240|gb|KGN44473.1| (hypothetical protein Csa_7G302370 [Cucumis sativus]) HSP 1 Score: 396.7 bits (1018), Expect = 2.3e-107 Identity = 186/192 (96.88%), Postives = 189/192 (98.44%), Query Frame = 1
BLAST of Cucsa.137640 vs. NCBI nr
Match: gi|778726529|ref|XP_011659114.1| (PREDICTED: uncharacterized protein LOC101215512 [Cucumis sativus]) HSP 1 Score: 396.7 bits (1018), Expect = 2.3e-107 Identity = 186/192 (96.88%), Postives = 189/192 (98.44%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |