Csa6G405910 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G405910
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRestriction endonuclease, type II-like protein; contains IPR011335 (Restriction endonuclease type II-like)
LocationChr6 : 18347498 .. 18348919 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCAATAGCAAAAAGATATTATTTGCCTGTAGTCAAGCTATTGGGAACTGTTCTTTACGAAATTTCAATTCTGTTTCTTTTTCTTCTTTACAATTTGAAACGGGTAATCACTATTCTGTTCTTCAGTCCAGTAGTTTTCAACATTGGTTCAAAAATTGGCAAGAGCTTCGAAAGCATAAGTTAACAGCAAGTACTTTTGCTGGGGCAATTGGGTTTTGGCCTCGTCGAAGGACTCAACTATGGTTGGAGAAACTTGGGGCAATTGATCAATTTTGTGGTAATCTTGCTACTTGTTGGAGTAATATGAAAGAAGAAGAAGCACTCGAAAGATACAAGCTTATTACTGGAAACTCTGTTTTGTTTCCTGAATTTCAAGTCTATGGTAAAGCAAACTCGGAAGATGATTGGTTGGCTGCTTCACCTGATGGTGCAATTGATAAAATGGTTTATGGATTGCCTTCACGAGGTGTGTTGGAGATTAAGTGCCCATTTTTTAACGGTGATTTGAGAAATGCTTTACCATGGTCACGAGTTCCTCGTTACTGTATTCCTCAGGCTCAAGGTTTGATGGAAATAATGGATAGGGATTGGATGGACTTTTATGTTTGGACTCCTAACGGTAGTAGTTTGTTTAGATTGTATCGAGATCCCGAATATTGGGATGTCTTGAAGATTGCTTTGTCGGATTTTTGGTGGAAGCATGTTCAACCTGCAAGGGAGATGTGTAGTAAATATGTCATTACAAATCCCCTCGTTGAGCTTAAGTCTCTTAGGCCGTCACCCAGGCATGAACTGTGTAGTTATATAGTTTGTGAGAGCAAACGGGTTGTCAATAATTCTAAGTTGCTCTTGCGTGAATTTGATGGGAGACTTCAAACCTAATTCATTGCAATCAATGGCTAAGCTTACAGTAAGGAATCTCAAACTCGAGCTTGAAGGGAGTTCTTGTTAACTCGAAAATTGCGGAATCTAACAATGATGTGAATGTTGTCAAACCAAGCACATCTCAAGTTTGACTACTACCCTTTTGCATCCATTGTTGACCCCCAGCCACGTGCTAGGGAAGTCCATCATTGCTTAGAGACATATTGAACATGCCGTGACACATATATCAGTCCCAATTCTAACTTCATTGGTGTGTAAGGATATGGTAGCAGCATGAAATGCAAAGGGCCATGGGGGAAGGTAAGCCTTTGGACTTCTGTTTGAAGGCTATTGATAATAGAAAAATCTGAACACTCATCCGTTTTCTTATTGAAAACACACAAACTAAGACTAAACTAAAGGAGACTCTGAGTTCAGATCAGAACTTAGACCTATGCATCTTAGAAATAATTGTAATTGTCTTTTGTTCTTGGGCAATGATATTGAATTAAAGGAGGAGGTTACATGATTCTTTATCACAATTAATATCTCTAT

mRNA sequence

ATGTTCAATAGCAAAAAGATATTATTTGCCTGTAGTCAAGCTATTGGGAACTGTTCTTTACGAAATTTCAATTCTGTTTCTTTTTCTTCTTTACAATTTGAAACGGGTAATCACTATTCTGTTCTTCAGTCCAGTAGTTTTCAACATTGGTTCAAAAATTGGCAAGAGCTTCGAAAGCATAAGTTAACAGCAAGTACTTTTGCTGGGGCAATTGGGTTTTGGCCTCGTCGAAGGACTCAACTATGGTTGGAGAAACTTGGGGCAATTGATCAATTTTGTGGTAATCTTGCTACTTGTTGGAGTAATATGAAAGAAGAAGAAGCACTCGAAAGATACAAGCTTATTACTGGAAACTCTGTTTTGTTTCCTGAATTTCAAGTCTATGGTAAAGCAAACTCGGAAGATGATTGGTTGGCTGCTTCACCTGATGGTGCAATTGATAAAATGGTTTATGGATTGCCTTCACGAGGTGTGTTGGAGATTAAGTGCCCATTTTTTAACGGTGATTTGAGAAATGCTTTACCATGGTCACGAGTTCCTCGTTACTGTATTCCTCAGGCTCAAGGTTTGATGGAAATAATGGATAGGGATTGGATGGACTTTTATGTTTGGACTCCTAACGGTAGTAGTTTGTTTAGATTGTATCGAGATCCCGAATATTGGGATGTCTTGAAGATTGCTTTGTCGGATTTTTGGTGGAAGCATGTTCAACCTGCAAGGGAGATGTGTAGTAAATATGTCATTACAAATCCCCTCGTTGAGCTTAAGTCTCTTAGGCCGTCACCCAGGCATGAACTGTGTAGTTATATAGTTTGTGAGAGCAAACGGGTTGTCAATAATTCTAAGTTGCTCTTGCGTGAATTTGATGGGAGACTTCAAACCTAA

Coding sequence (CDS)

ATGTTCAATAGCAAAAAGATATTATTTGCCTGTAGTCAAGCTATTGGGAACTGTTCTTTACGAAATTTCAATTCTGTTTCTTTTTCTTCTTTACAATTTGAAACGGGTAATCACTATTCTGTTCTTCAGTCCAGTAGTTTTCAACATTGGTTCAAAAATTGGCAAGAGCTTCGAAAGCATAAGTTAACAGCAAGTACTTTTGCTGGGGCAATTGGGTTTTGGCCTCGTCGAAGGACTCAACTATGGTTGGAGAAACTTGGGGCAATTGATCAATTTTGTGGTAATCTTGCTACTTGTTGGAGTAATATGAAAGAAGAAGAAGCACTCGAAAGATACAAGCTTATTACTGGAAACTCTGTTTTGTTTCCTGAATTTCAAGTCTATGGTAAAGCAAACTCGGAAGATGATTGGTTGGCTGCTTCACCTGATGGTGCAATTGATAAAATGGTTTATGGATTGCCTTCACGAGGTGTGTTGGAGATTAAGTGCCCATTTTTTAACGGTGATTTGAGAAATGCTTTACCATGGTCACGAGTTCCTCGTTACTGTATTCCTCAGGCTCAAGGTTTGATGGAAATAATGGATAGGGATTGGATGGACTTTTATGTTTGGACTCCTAACGGTAGTAGTTTGTTTAGATTGTATCGAGATCCCGAATATTGGGATGTCTTGAAGATTGCTTTGTCGGATTTTTGGTGGAAGCATGTTCAACCTGCAAGGGAGATGTGTAGTAAATATGTCATTACAAATCCCCTCGTTGAGCTTAAGTCTCTTAGGCCGTCACCCAGGCATGAACTGTGTAGTTATATAGTTTGTGAGAGCAAACGGGTTGTCAATAATTCTAAGTTGCTCTTGCGTGAATTTGATGGGAGACTTCAAACCTAA

Protein sequence

MFNSKKILFACSQAIGNCSLRNFNSVSFSSLQFETGNHYSVLQSSSFQHWFKNWQELRKHKLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDLRNALPWSRVPRYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDFWWKHVQPAREMCSKYVITNPLVELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQT*
Homology
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BLAST of Csa6G405910 vs. TrEMBL
Match: A0A0A0KG47_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G405910 PE=4 SV=1)

HSP 1 Score: 621.7 bits (1602), Expect = 4.6e-175
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 1 

Query: 1   MFNSKKILFACSQAIGNCSLRNFNSVSFSSLQFETGNHYSVLQSSSFQHWFKNWQELRKH 60
           MFNSKKILFACSQAIGNCSLRNFNSVSFSSLQFETGNHYSVLQSSSFQHWFKNWQELRKH
Sbjct: 1   MFNSKKILFACSQAIGNCSLRNFNSVSFSSLQFETGNHYSVLQSSSFQHWFKNWQELRKH 60

Query: 61  KLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSV 120
           KLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSV
Sbjct: 61  KLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSV 120

Query: 121 LFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDLRNALPWSRVP 180
           LFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDLRNALPWSRVP
Sbjct: 121 LFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDLRNALPWSRVP 180

Query: 181 RYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDFWWKHVQPAR 240
           RYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDFWWKHVQPAR
Sbjct: 181 RYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDFWWKHVQPAR 240

Query: 241 EMCSKYVITNPLVELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQT 295
           EMCSKYVITNPLVELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQT
Sbjct: 241 EMCSKYVITNPLVELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQT 294

[Close]
BLAST of Csa6G405910 vs. TrEMBL
Match: A0A0A0K4T5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G302370 PE=4 SV=1)

HSP 1 Score: 601.3 bits (1549), Expect = 6.4e-169
Identity = 283/294 (96.26%), Postives = 288/294 (97.96%), Query Frame = 1 

Query: 1   MFNSKKILFACSQAIGNCSLRNFNSVSFSSLQFETGNHYSVLQSSSFQHWFKNWQELRKH 60
           MFN KKILFACSQAIGNCS+RNFNSVS SSLQFET NHYSVLQS+SFQHWFKNWQELRKH
Sbjct: 9   MFNCKKILFACSQAIGNCSIRNFNSVSSSSLQFETVNHYSVLQSTSFQHWFKNWQELRKH 68

Query: 61  KLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSV 120
           KLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSV
Sbjct: 69  KLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSV 128

Query: 121 LFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDLRNALPWSRVP 180
           LFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGD+RNA PWSRVP
Sbjct: 129 LFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDMRNASPWSRVP 188

Query: 181 RYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDFWWKHVQPAR 240
            YCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRD EYWDVLKIALSDFWWKHVQPAR
Sbjct: 189 LYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDVEYWDVLKIALSDFWWKHVQPAR 248

Query: 241 EMCSKYVITNPLVELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQT 295
           EMCSKYV+TNPL+ELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQT
Sbjct: 249 EMCSKYVVTNPLIELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQT 302

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BLAST of Csa6G405910 vs. TrEMBL
Match: A0A061F0P2_THECC (DNA-directed RNA polymerase subunit beta OS=Theobroma cacao GN=TCM_025578 PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 2.6e-122
Identity = 204/255 (80.00%), Postives = 229/255 (89.80%), Query Frame = 1 

Query: 39  YSVLQSSSFQHWFKNWQELRKHKLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLAT 98
           +S+LQSSS QHWFKNWQE RK KLTASTF+GAIGFWP RR QLWLEK+GAI+ F GNLAT
Sbjct: 89  HSILQSSSLQHWFKNWQEQRKQKLTASTFSGAIGFWPCRRAQLWLEKIGAIEPFSGNLAT 148

Query: 99  CWSNMKEEEALERYKLITGNSVLFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGV 158
           CWSN+KEEEALERYKLITGN+V FPEFQVYGK ++E+ WLAASPDG +D+ VYGLP RGV
Sbjct: 149 CWSNIKEEEALERYKLITGNTVSFPEFQVYGKMDAEEGWLAASPDGLVDRFVYGLPLRGV 208

Query: 159 LEIKCPFFNGDLRNALPWSRVPRYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDP 218
           LEIKCPFF GD+  A PW R+P YCIPQAQGLMEIMDRDWMDFYVWTP GSSLFR+YRD 
Sbjct: 209 LEIKCPFFGGDMSKASPWRRIPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRIYRDV 268

Query: 219 EYWDVLKIALSDFWWKHVQPAREMCSKYVITNPLVELKSLRPSPRHELCSYIVCESKRVV 278
           EYWDVLK+ALSDFWWKHVQPA+E+CSKYVIT+PL ELKSLRP+PRHEL SYIV ESKRVV
Sbjct: 269 EYWDVLKVALSDFWWKHVQPAKEICSKYVITDPLRELKSLRPAPRHELLSYIVYESKRVV 328

Query: 279 NNSKLLLREFDGRLQ 294
           +NS LL+RE +G+L+
Sbjct: 329 DNSNLLIREINGQLK 343

[Close]
BLAST of Csa6G405910 vs. TrEMBL
Match: A0A067DVI9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019146mg PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.3e-121
Identity = 203/275 (73.82%), Postives = 238/275 (86.55%), Query Frame = 1 

Query: 19  SLRNFNSVSFSSLQFETGNHYSVLQSSSFQHWFKNWQELRKHKLTASTFAGAIGFWPRRR 78
           S ++F+S   +S  F +G  +S+LQSSS QHWFKNWQ+LRKHKLTASTFAGAIGFWPRRR
Sbjct: 70  SSKSFSSYIGNSPSFLSGESHSILQSSSLQHWFKNWQKLRKHKLTASTFAGAIGFWPRRR 129

Query: 79  TQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVYGKANSEDDWL 138
            QLWLEK+GAI+ F GNLATCWSN+KEE+ALERYKLITGN+V F EFQVY   + +DDWL
Sbjct: 130 VQLWLEKIGAIEPFLGNLATCWSNIKEEDALERYKLITGNTVYFTEFQVYRDKSRDDDWL 189

Query: 139 AASPDGAIDKMVYGLPSRGVLEIKCPFFNGDLRNALPWSRVPRYCIPQAQGLMEIMDRDW 198
           AASPDG +D+ VY LPS GVLEIKCPFFNG+L  A PW R+P Y IPQAQGLMEI+DRDW
Sbjct: 190 AASPDGLVDRFVYDLPSGGVLEIKCPFFNGELTRASPWKRIPLYYIPQAQGLMEILDRDW 249

Query: 199 MDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDFWWKHVQPAREMCSKYVITNPLVELKSL 258
           MDFYVWTPNGSSLFR+YRD EYWDV+K+ALSDFWWKHVQPAREMCSKYVI++PL +LK L
Sbjct: 250 MDFYVWTPNGSSLFRVYRDLEYWDVMKMALSDFWWKHVQPAREMCSKYVISDPLKQLKPL 309

Query: 259 RPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQ 294
           +P+PRHEL SY+V +SKR+++NS LL+RE  G+LQ
Sbjct: 310 KPTPRHELWSYLVYDSKRIIDNSSLLVREIGGKLQ 344

[Close]
BLAST of Csa6G405910 vs. TrEMBL
Match: V4SS59_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031987mg PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.3e-121
Identity = 203/275 (73.82%), Postives = 238/275 (86.55%), Query Frame = 1 

Query: 19  SLRNFNSVSFSSLQFETGNHYSVLQSSSFQHWFKNWQELRKHKLTASTFAGAIGFWPRRR 78
           S ++F+S   +S  F +G  +S+LQSSS QHWFKNWQ+LRKHKLTASTFAGAIGFWPRRR
Sbjct: 70  SSKSFSSYIGNSPSFLSGESHSILQSSSLQHWFKNWQKLRKHKLTASTFAGAIGFWPRRR 129

Query: 79  TQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVYGKANSEDDWL 138
            QLWLEK+GAI+ F GNLATCWSN+KEE+ALERYKLITGN+V F EFQVY   + +DDWL
Sbjct: 130 VQLWLEKIGAIEPFLGNLATCWSNIKEEDALERYKLITGNTVYFTEFQVYRDKSRDDDWL 189

Query: 139 AASPDGAIDKMVYGLPSRGVLEIKCPFFNGDLRNALPWSRVPRYCIPQAQGLMEIMDRDW 198
           AASPDG +D+ VY LPS GVLEIKCPFFNG+L  A PW R+P Y IPQAQGLMEI+DRDW
Sbjct: 190 AASPDGLVDRFVYDLPSGGVLEIKCPFFNGELTRASPWKRIPLYYIPQAQGLMEILDRDW 249

Query: 199 MDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDFWWKHVQPAREMCSKYVITNPLVELKSL 258
           MDFYVWTPNGSSLFR+YRD EYWDV+K+ALSDFWWKHVQPAREMCSKYVI++PL +LK L
Sbjct: 250 MDFYVWTPNGSSLFRVYRDLEYWDVMKMALSDFWWKHVQPAREMCSKYVISDPLKQLKPL 309

Query: 259 RPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQ 294
           +P+PRHEL SY+V +SKR+++NS LL+RE  G+LQ
Sbjct: 310 KPTPRHELWSYLVYDSKRIIDNSSLLVREIGGKLQ 344

[Close]
BLAST of Csa6G405910 vs. TAIR10
Match: AT1G13810.1 (AT1G13810.1 Restriction endonuclease, type II-like superfamily protein)

HSP 1 Score: 267.7 bits (683), Expect = 8.5e-72
Identity = 130/254 (51.18%), Postives = 165/254 (64.96%), Query Frame = 1 

Query: 40  SVLQSSSFQHWFKNWQELRKHKLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLATC 99
           +V+ +    HW KNW++LRK++LTAS FA AIGF P  R  LWLEK+GA   F GN AT 
Sbjct: 48  AVVVTEPTHHWRKNWEDLRKNRLTASNFARAIGFSPDGRRNLWLEKIGAAKPFAGNRATF 107

Query: 100 WSNMKEEEALERYKLITGNSVLFPEFQVYGKANS-EDDWLAASPDGAIDKMVYGLPSRGV 159
           W    E EALERY  +TGN +L PEF VY    S E++WL ASPDG I+ +  G+ S GV
Sbjct: 108 WDIENEVEALERYNELTGNEILIPEFVVYKNGESPEENWLGASPDGVINVVKDGVTSCGV 167

Query: 160 LEIKCPFFNGDLRNALPWSRVPRYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDP 219
           LE+KCPF N D     PW +VP  C+PQ QGLMEI+D DW+D Y WT NGSSLFR++RD 
Sbjct: 168 LEVKCPFDNRDNSKVYPWKKVPYNCVPQLQGLMEIVDTDWLDLYCWTRNGSSLFRVWRDT 227

Query: 220 EYWDVLKIALSDFWWKHVQPAREMCSKYVITNPLVELKSLRPSPRHELCSYIVCESKRVV 279
            +W+ +K AL DFW  HV PARE+ + + I +P V+L+  +P   HE C  I+  ++R+ 
Sbjct: 228 AFWEDMKPALFDFWQNHVLPAREIYNNFDIKDPQVKLREFKPKHWHEDCKKIMRGAERIS 287

Query: 280 NNSKLLLREFDGRL 293
            N+  L  E DG L
Sbjct: 288 ANANRLFYEIDGNL 301

[Close]
BLAST of Csa6G405910 vs. TAIR10
Match: AT1G67660.1 (AT1G67660.1 Restriction endonuclease, type II-like superfamily protein)

HSP 1 Score: 183.7 bits (465), Expect = 1.6e-46
Identity = 101/253 (39.92%), Postives = 135/253 (53.36%), Query Frame = 1 

Query: 40  SVLQSSSFQHWFKNWQELRKHKLTASTFAGAIGFWP-RRRTQLWLEKLGAID----QFCG 99
           S+L  S      + W  LRK KLT STF+ A+GFW   RR +LW EK+   D    +   
Sbjct: 107 SLLSPSDIPQKSEEWFALRKDKLTTSTFSTALGFWKGNRRAELWHEKVYDSDARVVEESA 166

Query: 100 NLATCWSNMKEEEALERYKLITGNSVLFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLP 159
             A  W    E  A+ERYK I G  V    F ++  +N E  WL ASPDG +D       
Sbjct: 167 RFAMNWGVQMESSAIERYKRIMGCEVGTMGFAIH--SNEEFHWLGASPDGILDCF----- 226

Query: 160 SRGVLEIKCPFFNGDLRNALPWSRVPRYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRL 219
             G+LE+KCP+  G     LPW +VP Y +PQ QG MEIMDR+W++ Y WT NGS++FR+
Sbjct: 227 --GILEVKCPYNKGKTETVLPWKKVPYYYMPQLQGQMEIMDREWVNLYCWTRNGSTVFRV 286

Query: 220 YRDPEYWDVLKIALSDFWWKHVQPAREMCSKYVITNPLVELKSLRPSPRHELCSYIVCES 279
            RD  YW ++   L +FWW+ V PARE     ++     E+K   P+  H+     + +S
Sbjct: 287 MRDRSYWRIIHDVLREFWWESVIPARE---ALLLGKEDEEVKKYEPTSTHKRTKLAIAKS 346

Query: 280 KRVVNNSKLLLRE 288
             +   SKL+ RE
Sbjct: 347 LNLAAESKLVCRE 347

[Close]
BLAST of Csa6G405910 vs. NCBI nr
Match: gi|700192625|gb|KGN47829.1| (hypothetical protein Csa_6G405910 [Cucumis sativus])

HSP 1 Score: 621.7 bits (1602), Expect = 6.6e-175
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 1 

Query: 1   MFNSKKILFACSQAIGNCSLRNFNSVSFSSLQFETGNHYSVLQSSSFQHWFKNWQELRKH 60
           MFNSKKILFACSQAIGNCSLRNFNSVSFSSLQFETGNHYSVLQSSSFQHWFKNWQELRKH
Sbjct: 1   MFNSKKILFACSQAIGNCSLRNFNSVSFSSLQFETGNHYSVLQSSSFQHWFKNWQELRKH 60

Query: 61  KLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSV 120
           KLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSV
Sbjct: 61  KLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSV 120

Query: 121 LFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDLRNALPWSRVP 180
           LFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDLRNALPWSRVP
Sbjct: 121 LFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDLRNALPWSRVP 180

Query: 181 RYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDFWWKHVQPAR 240
           RYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDFWWKHVQPAR
Sbjct: 181 RYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDFWWKHVQPAR 240

Query: 241 EMCSKYVITNPLVELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQT 295
           EMCSKYVITNPLVELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQT
Sbjct: 241 EMCSKYVITNPLVELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQT 294

[Close]
BLAST of Csa6G405910 vs. NCBI nr
Match: gi|659113272|ref|XP_008456487.1| (PREDICTED: uncharacterized protein LOC103496427 [Cucumis melo])

HSP 1 Score: 605.9 bits (1561), Expect = 3.7e-170
Identity = 283/294 (96.26%), Postives = 290/294 (98.64%), Query Frame = 1 

Query: 1   MFNSKKILFACSQAIGNCSLRNFNSVSFSSLQFETGNHYSVLQSSSFQHWFKNWQELRKH 60
           MFNSKKILFACSQAIGNCS+RNFNSVSFSSLQFETGNHYSVLQSSSFQHWFKNWQELRKH
Sbjct: 1   MFNSKKILFACSQAIGNCSIRNFNSVSFSSLQFETGNHYSVLQSSSFQHWFKNWQELRKH 60

Query: 61  KLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSV 120
           KLTASTFAGAIGFWPRRR QLWLEKLGAI+ FCGNLATCWSNMKEEEALERYKLITGNSV
Sbjct: 61  KLTASTFAGAIGFWPRRRAQLWLEKLGAIEPFCGNLATCWSNMKEEEALERYKLITGNSV 120

Query: 121 LFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDLRNALPWSRVP 180
           LFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGD+RNA PWS+VP
Sbjct: 121 LFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDMRNASPWSQVP 180

Query: 181 RYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDFWWKHVQPAR 240
           RYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDFWWKHVQPAR
Sbjct: 181 RYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDFWWKHVQPAR 240

Query: 241 EMCSKYVITNPLVELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQT 295
           E+CSKYVITNPL+ELKS RPSPRHELCSYIVCES+RVVNNSKLLLREFDGRLQT
Sbjct: 241 EICSKYVITNPLIELKSFRPSPRHELCSYIVCESRRVVNNSKLLLREFDGRLQT 294

[Close]
BLAST of Csa6G405910 vs. NCBI nr
Match: gi|778726529|ref|XP_011659114.1| (PREDICTED: uncharacterized protein LOC101215512 [Cucumis sativus])

HSP 1 Score: 601.3 bits (1549), Expect = 9.2e-169
Identity = 283/294 (96.26%), Postives = 288/294 (97.96%), Query Frame = 1 

Query: 1   MFNSKKILFACSQAIGNCSLRNFNSVSFSSLQFETGNHYSVLQSSSFQHWFKNWQELRKH 60
           MFN KKILFACSQAIGNCS+RNFNSVS SSLQFET NHYSVLQS+SFQHWFKNWQELRKH
Sbjct: 1   MFNCKKILFACSQAIGNCSIRNFNSVSSSSLQFETVNHYSVLQSTSFQHWFKNWQELRKH 60

Query: 61  KLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSV 120
           KLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSV
Sbjct: 61  KLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSV 120

Query: 121 LFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDLRNALPWSRVP 180
           LFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGD+RNA PWSRVP
Sbjct: 121 LFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDMRNASPWSRVP 180

Query: 181 RYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDFWWKHVQPAR 240
            YCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRD EYWDVLKIALSDFWWKHVQPAR
Sbjct: 181 LYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDVEYWDVLKIALSDFWWKHVQPAR 240

Query: 241 EMCSKYVITNPLVELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQT 295
           EMCSKYV+TNPL+ELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQT
Sbjct: 241 EMCSKYVVTNPLIELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQT 294

[Close]
BLAST of Csa6G405910 vs. NCBI nr
Match: gi|700189240|gb|KGN44473.1| (hypothetical protein Csa_7G302370 [Cucumis sativus])

HSP 1 Score: 601.3 bits (1549), Expect = 9.2e-169
Identity = 283/294 (96.26%), Postives = 288/294 (97.96%), Query Frame = 1 

Query: 1   MFNSKKILFACSQAIGNCSLRNFNSVSFSSLQFETGNHYSVLQSSSFQHWFKNWQELRKH 60
           MFN KKILFACSQAIGNCS+RNFNSVS SSLQFET NHYSVLQS+SFQHWFKNWQELRKH
Sbjct: 9   MFNCKKILFACSQAIGNCSIRNFNSVSSSSLQFETVNHYSVLQSTSFQHWFKNWQELRKH 68

Query: 61  KLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSV 120
           KLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSV
Sbjct: 69  KLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSV 128

Query: 121 LFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDLRNALPWSRVP 180
           LFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGD+RNA PWSRVP
Sbjct: 129 LFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDMRNASPWSRVP 188

Query: 181 RYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDFWWKHVQPAR 240
            YCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRD EYWDVLKIALSDFWWKHVQPAR
Sbjct: 189 LYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDVEYWDVLKIALSDFWWKHVQPAR 248

Query: 241 EMCSKYVITNPLVELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQT 295
           EMCSKYV+TNPL+ELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQT
Sbjct: 249 EMCSKYVVTNPLIELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQT 302

[Close]
BLAST of Csa6G405910 vs. NCBI nr
Match: gi|778722290|ref|XP_004149919.2| (PREDICTED: uncharacterized protein LOC101207616 [Cucumis sativus])

HSP 1 Score: 540.4 bits (1391), Expect = 1.9e-150
Identity = 252/258 (97.67%), Postives = 256/258 (99.22%), Query Frame = 1 

Query: 37  NHYSVLQSSSFQHWFKNWQELRKHKLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNL 96
           +H ++ +SSSFQHWFKNWQELRKHKLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNL
Sbjct: 8   SHPAIFKSSSFQHWFKNWQELRKHKLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNL 67

Query: 97  ATCWSNMKEEEALERYKLITGNSVLFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSR 156
           ATCWSNMKEEEALERYKLITGNSVLFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSR
Sbjct: 68  ATCWSNMKEEEALERYKLITGNSVLFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSR 127

Query: 157 GVLEIKCPFFNGDLRNALPWSRVPRYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYR 216
           GVLEIKCPFFNGDLRNALPWSRVPRYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYR
Sbjct: 128 GVLEIKCPFFNGDLRNALPWSRVPRYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYR 187

Query: 217 DPEYWDVLKIALSDFWWKHVQPAREMCSKYVITNPLVELKSLRPSPRHELCSYIVCESKR 276
           DPEYWDVLKIALSDFWWKHVQPAREMCSKYVITNPLVELKSLRPSPRHELCSYIVCESKR
Sbjct: 188 DPEYWDVLKIALSDFWWKHVQPAREMCSKYVITNPLVELKSLRPSPRHELCSYIVCESKR 247

Query: 277 VVNNSKLLLREFDGRLQT 295
           VVNNSKLLLREFDGRLQT
Sbjct: 248 VVNNSKLLLREFDGRLQT 265

The following BLAST results are available for this feature:
BLAST of Csa6G405910 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KG47_CUCSA4.6e-175100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G405910 PE=4 SV=1[more]
A0A0A0K4T5_CUCSA6.4e-16996.26Uncharacterized protein OS=Cucumis sativus GN=Csa_7G302370 PE=4 SV=1[more]
A0A061F0P2_THECC2.6e-12280.00DNA-directed RNA polymerase subunit beta OS=Theobroma cacao GN=TCM_025578 PE=4 S... [more]
A0A067DVI9_CITSI1.3e-12173.82Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019146mg PE=4 SV=1[more]
V4SS59_9ROSI1.3e-12173.82Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031987mg PE=4 SV=1[more]
BLAST of Csa6G405910 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G13810.18.5e-7251.18 Restriction endonuclease, type II-like superfamily protein[more]
AT1G67660.11.6e-4639.92 Restriction endonuclease, type II-like superfamily protein[more]
BLAST of Csa6G405910 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700192625|gb|KGN47829.1|6.6e-175100.00hypothetical protein Csa_6G405910 [Cucumis sativus][more]
gi|659113272|ref|XP_008456487.1|3.7e-17096.26PREDICTED: uncharacterized protein LOC103496427 [Cucumis melo][more]
gi|778726529|ref|XP_011659114.1|9.2e-16996.26PREDICTED: uncharacterized protein LOC101215512 [Cucumis sativus][more]
gi|700189240|gb|KGN44473.1|9.2e-16996.26hypothetical protein Csa_7G302370 [Cucumis sativus][more]
gi|778722290|ref|XP_004149919.2|1.9e-15097.67PREDICTED: uncharacterized protein LOC101207616 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011335Restrct_endonuc-II-like
IPR011604Exonuc_phg/RecB_C
IPR019080YqaJ_viral_recombinase
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0004518nuclease activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0022900 electron transport chain
cellular_component GO:0005730 nucleolus
cellular_component GO:0005623 cell
molecular_function GO:0003677 DNA binding
molecular_function GO:0003899 DNA-directed RNA polymerase activity
molecular_function GO:0004518 nuclease activity
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU168504cucumber EST collection version 3.0transcribed_cluster
CU174023cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G405910.1Csa6G405910.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU174023CU174023transcribed_cluster
CU168504CU168504transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011335Restriction endonuclease type II-likeunknownSSF52980Restriction endonuclease-likecoord: 38..242
score: 2.84
IPR011604Exonuclease, phage-type/RecB, C-terminalGENE3DG3DSA:3.90.320.10coord: 51..242
score: 5.0
IPR019080YqaJ viral recombinasePFAMPF09588YqaJcoord: 54..196
score: 4.0