Cucsa.133150 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.133150
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Prenylated rab acceptor PRA1
Location	scaffold01037 : 926455 .. 926992 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCTCCTTCCTAGAACGCGCTAAAACCACTACACAATCCCTAATCGCCACACAGCGGCCATGGCGAGAGCTTTTCGATTTCTCCGCTTTCTCTCTTCCTTTCAGCTACGACGATGCCATGGCTAGAATCCGTCAGAATGTCAACTACTTCCGTGTTAATTACGCTTTGGTGATGCTCATCATCGTTTTTTTGAGCTTGTTCTGGCACCCGATTTCGATCATCGTCTTCTTGCTGATCTTCGTTGCTTGGTTGTTCTTCTACTTCTTTCGTGATCAGCCTCTTGTTCTGTTCAATCAAACGTTTGATGATAAAGTTGTTTTGGGGGTTTTGAGCATTTTTACCATCATTGCTCTTGTTTCTACTGATGTGGGATCGAACGTTTTAGGAGCTCTAATTACAGGTGTGACAGTGGTTGGACTGCACTCGGCTTTTCGGATTACGGCGGACCATTTTCTCGATGAGGAAACTGCCGCAGAAGGGGGATTGCTGTCGGTTGTGGGTAATCAGCAACAACAACGAGGTTATACTCGGATTTGA

mRNA sequence

TTCCTCCTTCCTAGAACGCGCTAAAACCACTACACAATCCCTAATCGCCACACAGCGGCCATGGCGAGAGCTTTTCGATTTCTCCGCTTTCTCTCTTCCTTTCAGCTACGACGATGCCATGGCTAGAATCCGTCAGAATGTCAACTACTTCCGTGTTAATTACGCTTTGGTGATGCTCATCATCGTTTTTTTGAGCTTGTTCTGGCACCCGATTTCGATCATCGTCTTCTTGCTGATCTTCGTTGCTTGGTTGTTCTTCTACTTCTTTCGTGATCAGCCTCTTGTTCTGTTCAATCAAACGTTTGATGATAAAGTTGTTTTGGGGGTTTTGAGCATTTTTACCATCATTGCTCTTGTTTCTACTGATGTGGGATCGAACGTTTTAGGAGCTCTAATTACAGGTGTGACAGTGGTTGGACTGCACTCGGCTTTTCGGATTACGGCGGACCATTTTCTCGATGAGGAAACTGCCGCAGAAGGGGGATTGCTGTCGGTTGTGGGTAATCAGCAACAACAACGAGGTTATACTCGGATTTGA

Coding sequence (CDS)

TTCCTCCTTCCTAGAACGCGCTAAAACCACTACACAATCCCTAATCGCCACACAGCGGCCATGGCGAGAGCTTTTCGATTTCTCCGCTTTCTCTCTTCCTTTCAGCTACGACGATGCCATGGCTAGAATCCGTCAGAATGTCAACTACTTCCGTGTTAATTACGCTTTGGTGATGCTCATCATCGTTTTTTTGAGCTTGTTCTGGCACCCGATTTCGATCATCGTCTTCTTGCTGATCTTCGTTGCTTGGTTGTTCTTCTACTTCTTTCGTGATCAGCCTCTTGTTCTGTTCAATCAAACGTTTGATGATAAAGTTGTTTTGGGGGTTTTGAGCATTTTTACCATCATTGCTCTTGTTTCTACTGATGTGGGATCGAACGTTTTAGGAGCTCTAATTACAGGTGTGACAGTGGTTGGACTGCACTCGGCTTTTCGGATTACGGCGGACCATTTTCTCGATGAGGAAACTGCCGCAGAAGGGGGATTGCTGTCGGTTGTGGGTAATCAGCAACAACAACGAGGTTATACTCGGATTTGA

Protein sequence

SSFLERAKTTTQSLIATQRPWRELFDFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLFFYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVTVVGLHSAFRITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI*

Homology

[Close]

BLAST of Cucsa.133150 vs. Swiss-Prot
Match: PRA1E_ARATH (PRA1 family protein E OS=Arabidopsis thaliana GN=PRA1E PE=1 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 4.1e-47
Identity = 93/175 (53.14%), Postives = 123/175 (70.29%), Query Frame = 1


Query: 6   RAKTTTQSLIATQRPWRELFDFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLS 65
           RAK TTQS+I T RPWRE+ D SA SLP  YD+AMA ++ N++YFR NYAL +L IVFL 
Sbjct: 35  RAKQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLG 94

Query: 66  LFWHPISIIVFLLIFVAWLFFYFFRD--QPLVLFNQTFDDKVVLGVLSIFTIIALVSTDV 125
           L +HP+S+I F+++F+ W+  YF RD    +V+  +  DDK+VL +LS+ T++ALV TDV
Sbjct: 95  LIYHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDV 154

Query: 126 GSNVLGALITGVTVVGLHSAFRITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 179
           G NVL +LI G+ +VG H AFR T D FLDEE+A  GGL+S     +    YT I
Sbjct: 155 GENVLVSLIIGLLIVGAHGAFRNTDDLFLDEESARRGGLVSAGSGNRPPSSYTPI 209

[Close]

BLAST of Cucsa.133150 vs. Swiss-Prot
Match: PR1F3_ARATH (PRA1 family protein F3 OS=Arabidopsis thaliana GN=PRA1F3 PE=1 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.4e-39
Identity = 76/154 (49.35%), Postives = 106/154 (68.83%), Query Frame = 1


Query: 4   LERAKTTTQSLIATQRPWRELFDFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVF 63
           L RAK   ++ +AT+R WR +FDF +  LP    DA  RI+ N+ YFR+NYA+V+LI++F
Sbjct: 22  LSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSDAFTRIKTNLAYFRMNYAIVVLIVIF 81

Query: 64  LSLFWHPISIIVFLLIFVAWLFFYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDV 123
            SL WHP S+IVF ++ V W+F YF RD+P+ LF    DD+ VL VLS+ T++ L+ T+ 
Sbjct: 82  FSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQIDDRTVLIVLSVLTVVLLLLTNA 141

Query: 124 GSNVLGALITGVTVVGLHSAFRITADHFLDEETA 158
             N++GAL+TG  +V +HS  R T D FLDEE A
Sbjct: 142 TFNIVGALVTGAVLVLIHSVVRKTEDLFLDEEAA 175

[Close]

BLAST of Cucsa.133150 vs. Swiss-Prot
Match: PR1F2_ARATH (PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 7.8e-38
Identity = 76/165 (46.06%), Postives = 114/165 (69.09%), Query Frame = 1


Query: 3   FLERAKTTTQSLIATQRPWRELFDFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIV 62
           ++ RAK   +S +AT+RPW+ +FDF + +LP  + DA++RI+ N+ YFR NYA+ +L I+
Sbjct: 21  YISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKTNLGYFRANYAIGVLFIL 80

Query: 63  FLSLFWHPISIIVFLLIFVAWLFFYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTD 122
           FLSL +HP S+IV  ++ V W+F YF RD+PLV+F    DD+ VL  LS+ T++ L+ T 
Sbjct: 81  FLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDDRTVLIGLSVLTVVMLLLTH 140

Query: 123 VGSNVLGALITGVTVVGLHSAFRITADHFLDEETAA---EGGLLS 165
             SN+LG+L+T   +V +H+A R + + FLDEE AA     GL+S
Sbjct: 141 ATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEEAAAVTEASGLMS 185

[Close]

BLAST of Cucsa.133150 vs. Swiss-Prot
Match: PR1B3_ARATH (PRA1 family protein B3 OS=Arabidopsis thaliana GN=PRA1B3 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 7.3e-36
Identity = 77/165 (46.67%), Postives = 108/165 (65.45%), Query Frame = 1


Query: 2   SFLERAKTTTQSLIATQRPWRELFDFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLII 61
           +FL R  ++ +  ++ +RPW EL D SA S P S  DA +RIR+N+ YF+VNY  ++ ++
Sbjct: 31  TFLSRLSSSIRQSLSQRRPWLELVDRSAISRPESLTDAYSRIRRNLPYFKVNYVTIVSLV 90

Query: 62  VFLSLFWHPISIIVFLLIFVAWLFFYFFR--DQPLVLFNQTFDDKVVLGVLSIFTIIALV 121
           + LSL  HP S++V L +F AW+F Y FR  DQPLV+  +TF D+  LGVL I TI+ + 
Sbjct: 91  LALSLLSHPFSLLVLLCLFCAWIFLYLFRPSDQPLVVLGRTFSDRETLGVLVILTIVVVF 150

Query: 122 STDVGSNVLGALITGVTVVGLHSAFRITADHFLDEETAAEGGLLS 165
            T VGS +  AL+ G  +V LH AFR+  D FLD++  A  GLLS
Sbjct: 151 LTSVGSLLTSALMIGFGIVCLHGAFRVPEDLFLDDQEPANTGLLS 195

[Close]

BLAST of Cucsa.133150 vs. Swiss-Prot
Match: PR1B2_ARATH (PRA1 family protein B2 OS=Arabidopsis thaliana GN=PRA1B2 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.1e-34
Identity = 73/169 (43.20%), Postives = 110/169 (65.09%), Query Frame = 1


Query: 2   SFLERAKTTTQSLIATQRPWRELFDFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLII 61
           +FL R  ++ +  ++ +RPW EL D S+F+ P S  D+ +RIR+N+ YF+VNY+ ++ ++
Sbjct: 30  TFLSRLSSSLRESLSQRRPWLELVDRSSFARPDSLTDSFSRIRKNLAYFKVNYSAIVSLV 89

Query: 62  VFLSLFWHPISIIVFLLIFVAWLFFYFFR--DQPLVLFNQTFDDKVVLGVLSIFTIIALV 121
           +  SL  HP S++V L +  +W+F Y FR  DQPLVLF ++F D+  L  L + TI+ + 
Sbjct: 90  LAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSDQPLVLFGRSFSDRETLLGLVLTTIVVVF 149

Query: 122 STDVGSNVLGALITGVTVVGLHSAFRITADHFLDEETAAEGGLLSVVGN 169
            T VGS +  AL  G+ +V LH AFR+  D FLDE+  A  GLLS +GN
Sbjct: 150 MTSVGSLLTSALTIGIAIVCLHGAFRVPDDLFLDEQEPANAGLLSFIGN 198

[Close]

BLAST of Cucsa.133150 vs. TrEMBL
Match: A0A0A0LIB9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010300 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 1.2e-93
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 1


Query: 1   SSFLERAKTTTQSLIATQRPWRELFDFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLI 60
           SSFLERAKTTTQSLIATQRPWRELFDFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLI
Sbjct: 36  SSFLERAKTTTQSLIATQRPWRELFDFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLI 95

Query: 61  IVFLSLFWHPISIIVFLLIFVAWLFFYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVS 120
           IVFLSLFWHPISIIVFLLIFVAWLFFYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVS
Sbjct: 96  IVFLSLFWHPISIIVFLLIFVAWLFFYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVS 155

Query: 121 TDVGSNVLGALITGVTVVGLHSAFRITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 179
           TDVGSNVLGALITGVTVVGLHSAFRITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI
Sbjct: 156 TDVGSNVLGALITGVTVVGLHSAFRITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

[Close]

BLAST of Cucsa.133150 vs. TrEMBL
Match: A5AWF7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021777 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 4.3e-59
Identity = 116/178 (65.17%), Postives = 142/178 (79.78%), Query Frame = 1


Query: 2   SFLERAKTTTQSLIATQRPWRELFDFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLII 61
           +F+ RA   TQ+L+AT+RPWRE  D+SA S P +Y DAMARI++NVNYFRVNYA+VML I
Sbjct: 29  TFISRATQRTQTLMATRRPWREFLDYSALSRPHNYSDAMARIKRNVNYFRVNYAMVMLFI 88

Query: 62  VFLSLFWHPISIIVFLLIFVAWLFFYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVST 121
           +F+SL WHP S+IVFL+IFVAW F YFFRD P+VLF+QT DD+VVL +L + T++ALV T
Sbjct: 89  LFVSLLWHPTSMIVFLIIFVAWFFLYFFRDNPVVLFHQTIDDRVVLVLLGLITVVALVFT 148

Query: 122 DVGSNVLGALITGVTVVGLHSAFRITADHFLDEETAAEGGLLSVVGNQQ-QQRGYTRI 179
           DVG NVL +LI GV VVGLH+AFR T D FL+EE  AEGGLLSV G QQ +   YTR+
Sbjct: 149 DVGLNVLVSLIIGVAVVGLHAAFRGTEDLFLNEEEVAEGGLLSVAGGQQLRPTNYTRV 206

[Close]

BLAST of Cucsa.133150 vs. TrEMBL
Match: F6HVL4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0081g00090 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.2e-58
Identity = 115/178 (64.61%), Postives = 141/178 (79.21%), Query Frame = 1


Query: 2   SFLERAKTTTQSLIATQRPWRELFDFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLII 61
           +F+ RA   TQ+L+AT+RPWRE  D+S  S P +Y DAMARI++NVNYFRVNYA+VML I
Sbjct: 29  TFISRATQRTQTLMATRRPWREFLDYSVLSRPHNYSDAMARIKRNVNYFRVNYAMVMLFI 88

Query: 62  VFLSLFWHPISIIVFLLIFVAWLFFYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVST 121
           +F+SL WHP S+IVFL+IFVAW F YFFRD P+VLF+QT DD+VVL +L + T++ALV T
Sbjct: 89  LFVSLLWHPTSMIVFLIIFVAWFFLYFFRDNPVVLFHQTIDDRVVLVLLGLITVVALVFT 148

Query: 122 DVGSNVLGALITGVTVVGLHSAFRITADHFLDEETAAEGGLLSVVGNQQ-QQRGYTRI 179
           DVG NVL +LI GV VVGLH+AFR T D FL+EE  AEGGLLSV G QQ +   YTR+
Sbjct: 149 DVGLNVLVSLIIGVAVVGLHAAFRGTEDLFLNEEEVAEGGLLSVAGGQQLRPTNYTRV 206

[Close]

BLAST of Cucsa.133150 vs. TrEMBL
Match: B9SZ60_RICCO (Prenylated Rab acceptor protein, putative OS=Ricinus communis GN=RCOM_0484380 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.2e-56
Identity = 111/180 (61.67%), Postives = 144/180 (80.00%), Query Frame = 1


Query: 2   SFLERAKTTTQSLIATQRPWRELFDFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLII 61
           +F+ RA + TQS+IAT+RPW+EL + S+FS P +Y +AM+R++ NVNYFRVNYA+V+L +
Sbjct: 37  TFISRATSATQSVIATRRPWKELLNPSSFSCPCNYSEAMSRVKYNVNYFRVNYAMVVLSV 96

Query: 62  VFLSLFWHPISIIVFLLIFVAWLFFYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVST 121
           +FLSL WHP+S+IVF+++F+AW F YF RD P+VLFN+ FDD+VVL VL + TI+ALV T
Sbjct: 97  LFLSLLWHPVSMIVFIVVFIAWFFLYFSRDGPIVLFNREFDDRVVLVVLGLVTIVALVLT 156

Query: 122 DVGSNVLGALITGVTVVGLHSAFRITADHFLDEETAAEGGLLSVVGNQQQQ---RGYTRI 179
            VG NVL AL+ G  VVG+H AFR T D FLDEE+AAEGGLLSVVG+Q  +    GYTRI
Sbjct: 157 HVGLNVLVALMIGAVVVGIHGAFRNTEDLFLDEESAAEGGLLSVVGSQPLRPTTTGYTRI 216

[Close]

BLAST of Cucsa.133150 vs. TrEMBL
Match: W9RHQ8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024565 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.5e-56
Identity = 109/177 (61.58%), Postives = 141/177 (79.66%), Query Frame = 1


Query: 2   SFLERAKTTTQSLIATQRPWRELFDFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLII 61
           SF+ RA+ TT+S+IAT+RPWREL + S+FS+P +Y  AM+R+R N+NYFRVNY +  L++
Sbjct: 31  SFIARARHTTESVIATRRPWRELLELSSFSVPDNYAAAMSRVRWNLNYFRVNYVMATLLV 90

Query: 62  VFLSLFWHPISIIVFLLIFVAWLFFYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVST 121
           VFL L WHP+S+IVFL++FVAW F YFFRD P+V+  +T DD+ VL VLS+ T++ALV T
Sbjct: 91  VFLGLLWHPVSMIVFLVVFVAWFFLYFFRDGPVVMHGRTVDDRTVLVVLSLVTVLALVFT 150

Query: 122 DVGSNVLGALITGVTVVGLHSAFRITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 179
           DVG NVL +L+ GV VVGLH+AFR T D FLDEE+AAEGGLLSVVG+Q  +  Y  I
Sbjct: 151 DVGVNVLVSLVVGVCVVGLHAAFRGTEDLFLDEESAAEGGLLSVVGSQPLRSAYAPI 207

[Close]

BLAST of Cucsa.133150 vs. TAIR10
Match: AT1G08770.1 (AT1G08770.1 prenylated RAB acceptor 1.E)

HSP 1 Score: 189.1 bits (479), Expect = 2.3e-48
Identity = 93/175 (53.14%), Postives = 123/175 (70.29%), Query Frame = 1


Query: 6   RAKTTTQSLIATQRPWRELFDFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLS 65
           RAK TTQS+I T RPWRE+ D SA SLP  YD+AMA ++ N++YFR NYAL +L IVFL 
Sbjct: 35  RAKQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLG 94

Query: 66  LFWHPISIIVFLLIFVAWLFFYFFRD--QPLVLFNQTFDDKVVLGVLSIFTIIALVSTDV 125
           L +HP+S+I F+++F+ W+  YF RD    +V+  +  DDK+VL +LS+ T++ALV TDV
Sbjct: 95  LIYHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDV 154

Query: 126 GSNVLGALITGVTVVGLHSAFRITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 179
           G NVL +LI G+ +VG H AFR T D FLDEE+A  GGL+S     +    YT I
Sbjct: 155 GENVLVSLIIGLLIVGAHGAFRNTDDLFLDEESARRGGLVSAGSGNRPPSSYTPI 209

[Close]

BLAST of Cucsa.133150 vs. TAIR10
Match: AT3G13720.1 (AT3G13720.1 PRA1 (Prenylated rab acceptor) family protein)

HSP 1 Score: 164.1 bits (414), Expect = 8.0e-41
Identity = 76/154 (49.35%), Postives = 106/154 (68.83%), Query Frame = 1


Query: 4   LERAKTTTQSLIATQRPWRELFDFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVF 63
           L RAK   ++ +AT+R WR +FDF +  LP    DA  RI+ N+ YFR+NYA+V+LI++F
Sbjct: 22  LSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSDAFTRIKTNLAYFRMNYAIVVLIVIF 81

Query: 64  LSLFWHPISIIVFLLIFVAWLFFYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDV 123
            SL WHP S+IVF ++ V W+F YF RD+P+ LF    DD+ VL VLS+ T++ L+ T+ 
Sbjct: 82  FSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQIDDRTVLIVLSVLTVVLLLLTNA 141

Query: 124 GSNVLGALITGVTVVGLHSAFRITADHFLDEETA 158
             N++GAL+TG  +V +HS  R T D FLDEE A
Sbjct: 142 TFNIVGALVTGAVLVLIHSVVRKTEDLFLDEEAA 175

[Close]

BLAST of Cucsa.133150 vs. TAIR10
Match: AT1G55190.1 (AT1G55190.1 PRA1 (Prenylated rab acceptor) family protein)

HSP 1 Score: 158.3 bits (399), Expect = 4.4e-39
Identity = 76/165 (46.06%), Postives = 114/165 (69.09%), Query Frame = 1


Query: 3   FLERAKTTTQSLIATQRPWRELFDFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIV 62
           ++ RAK   +S +AT+RPW+ +FDF + +LP  + DA++RI+ N+ YFR NYA+ +L I+
Sbjct: 21  YISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKTNLGYFRANYAIGVLFIL 80

Query: 63  FLSLFWHPISIIVFLLIFVAWLFFYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTD 122
           FLSL +HP S+IV  ++ V W+F YF RD+PLV+F    DD+ VL  LS+ T++ L+ T 
Sbjct: 81  FLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDDRTVLIGLSVLTVVMLLLTH 140

Query: 123 VGSNVLGALITGVTVVGLHSAFRITADHFLDEETAA---EGGLLS 165
             SN+LG+L+T   +V +H+A R + + FLDEE AA     GL+S
Sbjct: 141 ATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEEAAAVTEASGLMS 185

[Close]

BLAST of Cucsa.133150 vs. TAIR10
Match: AT5G05380.1 (AT5G05380.1 prenylated RAB acceptor 1.B3)

HSP 1 Score: 151.8 bits (382), Expect = 4.1e-37
Identity = 77/165 (46.67%), Postives = 108/165 (65.45%), Query Frame = 1


Query: 2   SFLERAKTTTQSLIATQRPWRELFDFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLII 61
           +FL R  ++ +  ++ +RPW EL D SA S P S  DA +RIR+N+ YF+VNY  ++ ++
Sbjct: 31  TFLSRLSSSIRQSLSQRRPWLELVDRSAISRPESLTDAYSRIRRNLPYFKVNYVTIVSLV 90

Query: 62  VFLSLFWHPISIIVFLLIFVAWLFFYFFR--DQPLVLFNQTFDDKVVLGVLSIFTIIALV 121
           + LSL  HP S++V L +F AW+F Y FR  DQPLV+  +TF D+  LGVL I TI+ + 
Sbjct: 91  LALSLLSHPFSLLVLLCLFCAWIFLYLFRPSDQPLVVLGRTFSDRETLGVLVILTIVVVF 150

Query: 122 STDVGSNVLGALITGVTVVGLHSAFRITADHFLDEETAAEGGLLS 165
            T VGS +  AL+ G  +V LH AFR+  D FLD++  A  GLLS
Sbjct: 151 LTSVGSLLTSALMIGFGIVCLHGAFRVPEDLFLDDQEPANTGLLS 195

[Close]

BLAST of Cucsa.133150 vs. TAIR10
Match: AT2G40380.1 (AT2G40380.1 prenylated RAB acceptor 1.B2)

HSP 1 Score: 147.9 bits (372), Expect = 6.0e-36
Identity = 73/169 (43.20%), Postives = 110/169 (65.09%), Query Frame = 1


Query: 2   SFLERAKTTTQSLIATQRPWRELFDFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLII 61
           +FL R  ++ +  ++ +RPW EL D S+F+ P S  D+ +RIR+N+ YF+VNY+ ++ ++
Sbjct: 30  TFLSRLSSSLRESLSQRRPWLELVDRSSFARPDSLTDSFSRIRKNLAYFKVNYSAIVSLV 89

Query: 62  VFLSLFWHPISIIVFLLIFVAWLFFYFFR--DQPLVLFNQTFDDKVVLGVLSIFTIIALV 121
           +  SL  HP S++V L +  +W+F Y FR  DQPLVLF ++F D+  L  L + TI+ + 
Sbjct: 90  LAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSDQPLVLFGRSFSDRETLLGLVLTTIVVVF 149

Query: 122 STDVGSNVLGALITGVTVVGLHSAFRITADHFLDEETAAEGGLLSVVGN 169
            T VGS +  AL  G+ +V LH AFR+  D FLDE+  A  GLLS +GN
Sbjct: 150 MTSVGSLLTSALTIGIAIVCLHGAFRVPDDLFLDEQEPANAGLLSFIGN 198

[Close]

BLAST of Cucsa.133150 vs. NCBI nr
Match: gi|449442951|ref|XP_004139244.1| (PREDICTED: PRA1 family protein E-like [Cucumis sativus])

HSP 1 Score: 350.5 bits (898), Expect = 1.7e-93
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 1


Query: 1   SSFLERAKTTTQSLIATQRPWRELFDFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLI 60
           SSFLERAKTTTQSLIATQRPWRELFDFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLI
Sbjct: 36  SSFLERAKTTTQSLIATQRPWRELFDFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLI 95

Query: 61  IVFLSLFWHPISIIVFLLIFVAWLFFYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVS 120
           IVFLSLFWHPISIIVFLLIFVAWLFFYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVS
Sbjct: 96  IVFLSLFWHPISIIVFLLIFVAWLFFYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVS 155

Query: 121 TDVGSNVLGALITGVTVVGLHSAFRITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 179
           TDVGSNVLGALITGVTVVGLHSAFRITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI
Sbjct: 156 TDVGSNVLGALITGVTVVGLHSAFRITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

[Close]

BLAST of Cucsa.133150 vs. NCBI nr
Match: gi|659070671|ref|XP_008456115.1| (PREDICTED: PRA1 family protein E [Cucumis melo])

HSP 1 Score: 344.7 bits (883), Expect = 9.4e-92
Identity = 175/178 (98.31%), Postives = 176/178 (98.88%), Query Frame = 1


Query: 1   SSFLERAKTTTQSLIATQRPWRELFDFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLI 60
           SSFLERAKTTTQSLIAT RPWRELFDFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLI
Sbjct: 36  SSFLERAKTTTQSLIATLRPWRELFDFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLI 95

Query: 61  IVFLSLFWHPISIIVFLLIFVAWLFFYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVS 120
           IVFLSLFWHPISIIVFLLIFVAWLFFYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVS
Sbjct: 96  IVFLSLFWHPISIIVFLLIFVAWLFFYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVS 155

Query: 121 TDVGSNVLGALITGVTVVGLHSAFRITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 179
           TDVGSNVLGALITGV VVGLH+AFRITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI
Sbjct: 156 TDVGSNVLGALITGVAVVGLHAAFRITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

[Close]

BLAST of Cucsa.133150 vs. NCBI nr
Match: gi|1009117653|ref|XP_015875432.1| (PREDICTED: PRA1 family protein E [Ziziphus jujuba])

HSP 1 Score: 249.6 bits (636), Expect = 4.1e-63
Identity = 122/177 (68.93%), Postives = 146/177 (82.49%), Query Frame = 1


Query: 2   SFLERAKTTTQSLIATQRPWRELFDFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLII 61
           SF+ RA+ TT+S+IAT RPW ELF FS+FS P++Y++AM RIR NVNYFR+NYA++MLII
Sbjct: 30  SFIARARRTTESVIATSRPWSELFQFSSFSRPYNYNEAMNRIRWNVNYFRINYAMIMLII 89

Query: 62  VFLSLFWHPISIIVFLLIFVAWLFFYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVST 121
           VFL L WHPIS+IVFL IF+ W F YFFRD P+V+FN+T DD+VVL VLS+ TI+ALV T
Sbjct: 90  VFLGLLWHPISMIVFLGIFIGWFFLYFFRDGPIVVFNRTLDDRVVLSVLSVVTIVALVLT 149

Query: 122 DVGSNVLGALITGVTVVGLHSAFRITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 179
           DVG NVL +LI GV  VGLH+AFR T D FLDEE+AAEGGLLSVVG+Q  Q  YTRI
Sbjct: 150 DVGLNVLVSLIIGVVFVGLHAAFRATEDLFLDEESAAEGGLLSVVGSQPLQPTYTRI 206

[Close]

BLAST of Cucsa.133150 vs. NCBI nr
Match: gi|147787959|emb|CAN73850.1| (hypothetical protein VITISV_021777 [Vitis vinifera])

HSP 1 Score: 235.7 bits (600), Expect = 6.2e-59
Identity = 116/178 (65.17%), Postives = 142/178 (79.78%), Query Frame = 1


Query: 2   SFLERAKTTTQSLIATQRPWRELFDFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLII 61
           +F+ RA   TQ+L+AT+RPWRE  D+SA S P +Y DAMARI++NVNYFRVNYA+VML I
Sbjct: 29  TFISRATQRTQTLMATRRPWREFLDYSALSRPHNYSDAMARIKRNVNYFRVNYAMVMLFI 88

Query: 62  VFLSLFWHPISIIVFLLIFVAWLFFYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVST 121
           +F+SL WHP S+IVFL+IFVAW F YFFRD P+VLF+QT DD+VVL +L + T++ALV T
Sbjct: 89  LFVSLLWHPTSMIVFLIIFVAWFFLYFFRDNPVVLFHQTIDDRVVLVLLGLITVVALVFT 148

Query: 122 DVGSNVLGALITGVTVVGLHSAFRITADHFLDEETAAEGGLLSVVGNQQ-QQRGYTRI 179
           DVG NVL +LI GV VVGLH+AFR T D FL+EE  AEGGLLSV G QQ +   YTR+
Sbjct: 149 DVGLNVLVSLIIGVAVVGLHAAFRGTEDLFLNEEEVAEGGLLSVAGGQQLRPTNYTRV 206

[Close]

BLAST of Cucsa.133150 vs. NCBI nr
Match: gi|731417045|ref|XP_010660142.1| (PREDICTED: PRA1 family protein E [Vitis vinifera])

HSP 1 Score: 234.2 bits (596), Expect = 1.8e-58
Identity = 115/178 (64.61%), Postives = 141/178 (79.21%), Query Frame = 1


Query: 2   SFLERAKTTTQSLIATQRPWRELFDFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLII 61
           +F+ RA   TQ+L+AT+RPWRE  D+S  S P +Y DAMARI++NVNYFRVNYA+VML I
Sbjct: 29  TFISRATQRTQTLMATRRPWREFLDYSVLSRPHNYSDAMARIKRNVNYFRVNYAMVMLFI 88

Query: 62  VFLSLFWHPISIIVFLLIFVAWLFFYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVST 121
           +F+SL WHP S+IVFL+IFVAW F YFFRD P+VLF+QT DD+VVL +L + T++ALV T
Sbjct: 89  LFVSLLWHPTSMIVFLIIFVAWFFLYFFRDNPVVLFHQTIDDRVVLVLLGLITVVALVFT 148

Query: 122 DVGSNVLGALITGVTVVGLHSAFRITADHFLDEETAAEGGLLSVVGNQQ-QQRGYTRI 179
           DVG NVL +LI GV VVGLH+AFR T D FL+EE  AEGGLLSV G QQ +   YTR+
Sbjct: 149 DVGLNVLVSLIIGVAVVGLHAAFRGTEDLFLNEEEVAEGGLLSVAGGQQLRPTNYTRV 206

The following BLAST results are available for this feature:

BLAST of Cucsa.133150 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRA1E_ARATH	4.1e-47	53.14	PRA1 family protein E OS=Arabidopsis thaliana GN=PRA1E PE=1 SV=1	[more]
PR1F3_ARATH	1.4e-39	49.35	PRA1 family protein F3 OS=Arabidopsis thaliana GN=PRA1F3 PE=1 SV=1	[more]
PR1F2_ARATH	7.8e-38	46.06	PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1	[more]
PR1B3_ARATH	7.3e-36	46.67	PRA1 family protein B3 OS=Arabidopsis thaliana GN=PRA1B3 PE=1 SV=1	[more]
PR1B2_ARATH	1.1e-34	43.20	PRA1 family protein B2 OS=Arabidopsis thaliana GN=PRA1B2 PE=1 SV=1	[more]

BLAST of Cucsa.133150 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIB9_CUCSA	1.2e-93	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010300 PE=4 SV=1	[more]
A5AWF7_VITVI	4.3e-59	65.17	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021777 PE=4 SV=1	[more]
F6HVL4_VITVI	1.2e-58	64.61	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0081g00090 PE=4 SV=...	[more]
B9SZ60_RICCO	1.2e-56	61.67	Prenylated Rab acceptor protein, putative OS=Ricinus communis GN=RCOM_0484380 PE...	[more]
W9RHQ8_9ROSA	1.5e-56	61.58	Uncharacterized protein OS=Morus notabilis GN=L484_024565 PE=4 SV=1	[more]

BLAST of Cucsa.133150 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08770.1	2.3e-48	53.14	prenylated RAB acceptor 1.E	[more]
AT3G13720.1	8.0e-41	49.35	PRA1 (Prenylated rab acceptor) family protein	[more]
AT1G55190.1	4.4e-39	46.06	PRA1 (Prenylated rab acceptor) family protein	[more]
AT5G05380.1	4.1e-37	46.67	prenylated RAB acceptor 1.B3	[more]
AT2G40380.1	6.0e-36	43.20	prenylated RAB acceptor 1.B2	[more]

BLAST of Cucsa.133150 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442951\|ref\|XP_004139244.1\|	1.7e-93	100.00	PREDICTED: PRA1 family protein E-like [Cucumis sativus]	[more]
gi\|659070671\|ref\|XP_008456115.1\|	9.4e-92	98.31	PREDICTED: PRA1 family protein E [Cucumis melo]	[more]
gi\|1009117653\|ref\|XP_015875432.1\|	4.1e-63	68.93	PREDICTED: PRA1 family protein E [Ziziphus jujuba]	[more]
gi\|147787959\|emb\|CAN73850.1\|	6.2e-59	65.17	hypothetical protein VITISV_021777 [Vitis vinifera]	[more]
gi\|731417045\|ref\|XP_010660142.1\|	1.8e-58	64.61	PREDICTED: PRA1 family protein E [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004895	Prenylated_rab_accept_PRA1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.133150.1	Cucsa.133150.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 15..155 score: 3.6
None	No IPR available	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 1..178 score: 9.0
None	No IPR available	PANTHER	PTHR19317:SF3	PRA1 FAMILY PROTEIN E	coord: 1..178 score: 9.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.133150	Cla019796	Watermelon (97103) v1	cgywmB223
Cucsa.133150	Csa2G010300	Cucumber (Chinese Long) v2	cgycuB184
Cucsa.133150	MELO3C004391	Melon (DHL92) v3.5.1	cgymeB216
Cucsa.133150	ClCG02G016740	Watermelon (Charleston Gray)	cgywcgB218
Cucsa.133150	CSPI02G02850	Wild cucumber (PI 183967)	cgycpiB187
Cucsa.133150	CmaCh12G011270	Cucurbita maxima (Rimu)	cgycmaB0364
Cucsa.133150	CmaCh05G012110	Cucurbita maxima (Rimu)	cgycmaB0365
Cucsa.133150	CmoCh12G011470	Cucurbita moschata (Rifu)	cgycmoB0359
Cucsa.133150	CmoCh05G012330	Cucurbita moschata (Rifu)	cgycmoB0362
Cucsa.133150	Lsi11G004350	Bottle gourd (USVL1VR-Ls)	cgylsiB205
Cucsa.133150	Lsi05G016670	Bottle gourd (USVL1VR-Ls)	cgylsiB208
Cucsa.133150	Cp4.1LG00g04290	Cucurbita pepo (Zucchini)	cgycpeB0350
Cucsa.133150	Cp4.1LG07g09520	Cucurbita pepo (Zucchini)	cgycpeB0356
Cucsa.133150	MELO3C004391.2	Melon (DHL92) v3.6.1	cgymedB213
Cucsa.133150	CsaV3_2G004000	Cucumber (Chinese Long) v3	cgycucB190
Cucsa.133150	Cla97C02G042520	Watermelon (97103) v2	cgywmbB213
Cucsa.133150	Bhi06G001532	Wax gourd	cgywgoB251
Cucsa.133150	Carg22989	Silver-seed gourd	carcgyB1188
Cucsa.133150	Carg17601	Silver-seed gourd	carcgyB0804
Cucsa.133150	Carg08987	Silver-seed gourd	carcgyB0883

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.133150	Melon (DHL92) v3.6.1	cgymedB215
Cucsa.133150	Cucumber (Chinese Long) v3	cgycucB191
Cucsa.133150	Watermelon (97103) v2	cgywmbB214
Cucsa.133150	Cucumber (Gy14) v1	cgycgyB079
Cucsa.133150	Watermelon (97103) v1	cgywmB221
Cucsa.133150	Cucurbita pepo (Zucchini)	cgycpeB0351