Carg17601 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17601
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	PRA1 family protein
Location	Cucurbita_argyrosperma_scaffold_183 : 570792 .. 571439 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACGGGTCAAATTCGCCGCCGTCTACGGCACCGTGCCCTCTCCGCCCGCCGCCACATTCCCCACCACTTCCGGTGAAGCTCCTCCATCTTTCCCTTCCAGTTCCTCCTTTCTCGAACACGCTAAAACTACCACGCAATCCCTAATCGCCAAACAGCGGCCATGGCGAGAGCTCCTCGATTTCTCCGCCTTCTCTCTCCCTTTAAGCTCCGATGACGCTATGGCGAGAATCCGCCAGAACGTGAACTACTTTCATGTCAATTACGCCATGGTGATGCTCGTCATCGTCTTCTTCAGCTTATTCTGGCACCCGACTTCGTTCTTCGTTATCTTGCTCGTCTTCGTTGCTTGGTTGTTCTTCTACTTCCTCCGCGATCAGCCTCTCGTTCTCTTCGACCAAACGTTCGATGACAAAGTTGTTTTGGGGGTTTTGAGCATTTTTACAATCATCGCTCTTGTTTCTACTGATGTCGGATCGAATGTTTTGGGAGCCCTAACAACAGGGACCGTCGTTGTTGCGTTGCACGCGGCGTTTCGGAGTACGGCGGATCAATTTCTCGATTTGGAGACTGCTACACAAGGGGGATTGCTGTCGGCTGCGGGAAATCAGCAACAACAACAACAACGAGGCTACACTCGGATTTGA

mRNA sequence

ATGTCACGGGTCAAATTCGCCGCCGTCTACGGCACCGTGCCCTCTCCGCCCGCCGCCACATTCCCCACCACTTCCGGTGAAGCTCCTCCATCTTTCCCTTCCAGTTCCTCCTTTCTCGAACACGCTAAAACTACCACGCAATCCCTAATCGCCAAACAGCGGCCATGGCGAGAGCTCCTCGATTTCTCCGCCTTCTCTCTCCCTTTAAGCTCCGATGACGCTATGGCGAGAATCCGCCAGAACGTGAACTACTTTCATGTCAATTACGCCATGGTGATGCTCGTCATCGTCTTCTTCAGCTTATTCTGGCACCCGACTTCGTTCTTCGTTATCTTGCTCGTCTTCGTTGCTTGGTTGTTCTTCTACTTCCTCCGCGATCAGCCTCTCGTTCTCTTCGACCAAACGTTCGATGACAAAGTTGTTTTGGGGGTTTTGAGCATTTTTACAATCATCGCTCTTGTTTCTACTGATGTCGGATCGAATGTTTTGGGAGCCCTAACAACAGGGACCGTCGTTGTTGCGTTGCACGCGGCGTTTCGGAGTACGGCGGATCAATTTCTCGATTTGGAGACTGCTACACAAGGGGGATTGCTGTCGGCTGCGGGAAATCAGCAACAACAACAACAACGAGGCTACACTCGGATTTGA

Coding sequence (CDS)

ATGTCACGGGTCAAATTCGCCGCCGTCTACGGCACCGTGCCCTCTCCGCCCGCCGCCACATTCCCCACCACTTCCGGTGAAGCTCCTCCATCTTTCCCTTCCAGTTCCTCCTTTCTCGAACACGCTAAAACTACCACGCAATCCCTAATCGCCAAACAGCGGCCATGGCGAGAGCTCCTCGATTTCTCCGCCTTCTCTCTCCCTTTAAGCTCCGATGACGCTATGGCGAGAATCCGCCAGAACGTGAACTACTTTCATGTCAATTACGCCATGGTGATGCTCGTCATCGTCTTCTTCAGCTTATTCTGGCACCCGACTTCGTTCTTCGTTATCTTGCTCGTCTTCGTTGCTTGGTTGTTCTTCTACTTCCTCCGCGATCAGCCTCTCGTTCTCTTCGACCAAACGTTCGATGACAAAGTTGTTTTGGGGGTTTTGAGCATTTTTACAATCATCGCTCTTGTTTCTACTGATGTCGGATCGAATGTTTTGGGAGCCCTAACAACAGGGACCGTCGTTGTTGCGTTGCACGCGGCGTTTCGGAGTACGGCGGATCAATTTCTCGATTTGGAGACTGCTACACAAGGGGGATTGCTGTCGGCTGCGGGAAATCAGCAACAACAACAACAACGAGGCTACACTCGGATTTGA

Protein sequence

MSRVKFAAVYGTVPSPPAATFPTTSGEAPPSFPSSSSFLEHAKTTTQSLIAKQRPWRELLDFSAFSLPLSSDDAMARIRQNVNYFHVNYAMVMLVIVFFSLFWHPTSFFVILLVFVAWLFFYFLRDQPLVLFDQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALTTGTVVVALHAAFRSTADQFLDLETATQGGLLSAAGNQQQQQQRGYTRI

Homology

[Close]

BLAST of Carg17601 vs. NCBI nr
Match: XP_022937618.1 (PRA1 family protein F3-like [Cucurbita moschata] >XP_022937619.1 PRA1 family protein F3-like [Cucurbita moschata] >XP_022937620.1 PRA1 family protein F3-like [Cucurbita moschata] >XP_022937621.1 PRA1 family protein F3-like [Cucurbita moschata])

HSP 1 Score: 377.1 bits (967), Expect = 4.0e-101
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MSRVKFAAVYGTVPSPPAATFPTTSGEAPPSFPSSSSFLEHAKTTTQSLIAKQRPWRELL 60
           MSRVKFAAVYGTVPSPPAATFPTTSGEAPPSFPSSSSFLEHAKTTTQSLIAKQRPWRELL
Sbjct: 1   MSRVKFAAVYGTVPSPPAATFPTTSGEAPPSFPSSSSFLEHAKTTTQSLIAKQRPWRELL 60

Query: 61  DFSAFSLPLSSDDAMARIRQNVNYFHVNYAMVMLVIVFFSLFWHPTSFFVILLVFVAWLF 120
           DFSAFSLPLSSDDAMARIRQNVNYFHVNYAMVMLVIVFFSLFWHPTSFFVILLVFVAWLF
Sbjct: 61  DFSAFSLPLSSDDAMARIRQNVNYFHVNYAMVMLVIVFFSLFWHPTSFFVILLVFVAWLF 120

Query: 121 FYFLRDQPLVLFDQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALTTGTVVVALHAAFR 180
           FYFLRDQPLVLFDQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALTTGTVVVALHAAFR
Sbjct: 121 FYFLRDQPLVLFDQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALTTGTVVVALHAAFR 180

Query: 181 STADQFLDLETATQGGLXXXXXXXXXXXXRGYTRI 216
           STADQFLDLETATQGGLXXXXXXXXXXXXRGYTRI
Sbjct: 181 STADQFLDLETATQGGLXXXXXXXXXXXXRGYTRI 215

[Close]

BLAST of Carg17601 vs. NCBI nr
Match: XP_022965927.1 (PRA1 family protein F3-like [Cucurbita maxima] >XP_022965928.1 PRA1 family protein F3-like [Cucurbita maxima])

HSP 1 Score: 360.5 bits (924), Expect = 3.9e-96
Identity = 197/215 (91.63%), Postives = 199/215 (92.56%), Query Frame = 0


Query: 1   MSRVKFAAVYGTVPSPPAATFPTTSGEAPPSFPSSSSFLEHAKTTTQSLIAKQRPWRELL 60
           MSRVKFAA YGTVPSPP AT PTTSGEAPPSF SSSSFLEHAKTTTQSLIAKQRPWRELL
Sbjct: 1   MSRVKFAAAYGTVPSPPPATIPTTSGEAPPSFRSSSSFLEHAKTTTQSLIAKQRPWRELL 60

Query: 61  DFSAFSLPLSSDDAMARIRQNVNYFHVNYAMVMLVIVFFSLFWHPTSFFVILLVFVAWLF 120
           DFSAFSLPLSSDDAMARIRQNVNYFHVNYAMVMLVIVFFSLFWHPTSFFVILLVFVAWLF
Sbjct: 61  DFSAFSLPLSSDDAMARIRQNVNYFHVNYAMVMLVIVFFSLFWHPTSFFVILLVFVAWLF 120

Query: 121 FYFLRDQPLVLFDQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALTTGTVVVALHAAFR 180
           FYFLRDQPLVLF+QTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALTTGTVVVALHAAFR
Sbjct: 121 FYFLRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALTTGTVVVALHAAFR 180

Query: 181 STADQFLDLETATQGGLXXXXXXXXXXXXRGYTRI 216
           STADQFLD+ETATQGGL            RGYTRI
Sbjct: 181 STADQFLDVETATQGGL-LSAAGNQQQQQRGYTRI 214

[Close]

BLAST of Carg17601 vs. NCBI nr
Match: XP_023538284.1 (PRA1 family protein F3-like [Cucurbita pepo subsp. pepo] >XP_023538285.1 PRA1 family protein F3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 355.1 bits (910), Expect = 1.6e-94
Identity = 190/195 (97.44%), Postives = 192/195 (98.46%), Query Frame = 0


Query: 1   MSRVKFAAVYGTVPSPPAATFPTTSGEAPPSFPSSSSFLEHAKTTTQSLIAKQRPWRELL 60
           MSRVKFAAVYGTVPSPPAATFPT SG APPSFPSSSSFLEHAKTTTQSLIAKQRPWRELL
Sbjct: 1   MSRVKFAAVYGTVPSPPAATFPTNSGGAPPSFPSSSSFLEHAKTTTQSLIAKQRPWRELL 60

Query: 61  DFSAFSLPLSSDDAMARIRQNVNYFHVNYAMVMLVIVFFSLFWHPTSFFVILLVFVAWLF 120
           DFSAFSLPLSSDDAMARIRQNVNYFHVNYAMV +VIVFFSLFWHPTSFFVILLVFVAWLF
Sbjct: 61  DFSAFSLPLSSDDAMARIRQNVNYFHVNYAMVNVVIVFFSLFWHPTSFFVILLVFVAWLF 120

Query: 121 FYFLRDQPLVLFDQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALTTGTVVVALHAAFR 180
           FYFLRDQPLVLF+QTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALTTGTVVVALHAAFR
Sbjct: 121 FYFLRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALTTGTVVVALHAAFR 180

Query: 181 STADQFLDLETATQG 196
           STADQFLDLETATQG
Sbjct: 181 STADQFLDLETATQG 195

[Close]

BLAST of Carg17601 vs. NCBI nr
Match: XP_004139244.1 (PREDICTED: PRA1 family protein E-like [Cucumis sativus] >KGN60794.1 hypothetical protein Csa_2G010300 [Cucumis sativus])

HSP 1 Score: 301.6 bits (771), Expect = 2.1e-78
Identity = 167/215 (77.67%), Postives = 175/215 (81.40%), Query Frame = 0


Query: 1   MSRVKFAAVYGTVPSPPAATFPTTSGEAPPSFPSSSSFLEHAKTTTQSLIAKQRPWRELL 60
           MS VKF++ YG VPS  AAT PTTS  APPSFPSSSSFLE AKTTTQSLIA QRPWREL 
Sbjct: 1   MSSVKFSSGYGAVPSQAAATIPTTSSGAPPSFPSSSSFLERAKTTTQSLIATQRPWRELF 60

Query: 61  DFSAFSLPLSSDDAMARIRQNVNYFHVNYAMVMLVIVFFSLFWHPTSFFVILLVFVAWLF 120
           DFSAFSLP S DDAMARIRQNVNYF VNYA+VML+IVF SLFWHP S  V LL+FVAWLF
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLF 120

Query: 121 FYFLRDQPLVLFDQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALTTGTVVVALHAAFR 180
           FYF RDQPLVLF+QTFDDKVVLGVLSIFTIIALVSTDVGSNVLGAL TG  VV LH+AFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVTVVGLHSAFR 180

Query: 181 STADQFLDLETATQGGLXXXXXXXXXXXXRGYTRI 216
            TAD FLD ETA +GGL            RGYTRI
Sbjct: 181 ITADHFLDEETAAEGGL--LSVVGNQQQQRGYTRI 213

[Close]

BLAST of Carg17601 vs. NCBI nr
Match: XP_022142976.1 (PRA1 family protein E [Momordica charantia])

HSP 1 Score: 286.2 bits (731), Expect = 9.3e-74
Identity = 163/214 (76.17%), Postives = 169/214 (78.97%), Query Frame = 0


Query: 2   SRVKFAAVYGTVPSPPAATFPTTSGEAPPSFPSSSSFLEHAKTTTQSLIAKQRPWRELLD 61
           S VKF+  Y T+ SPPAAT P  S EAPPS  SSSSFLE AK TTQSLIA QRPWRELLD
Sbjct: 5   SSVKFSVGYSTLSSPPAATIPVISAEAPPSL-SSSSFLERAKNTTQSLIATQRPWRELLD 64

Query: 62  FSAFSLPLSSDDAMARIRQNVNYFHVNYAMVMLVIVFFSLFWHPTSFFVILLVFVAWLFF 121
           FSAFSLPL  DDAMARIRQNVNYF VNYA+VML+IV FSLFWHP S  V LLVFV WLFF
Sbjct: 65  FSAFSLPLGYDDAMARIRQNVNYFRVNYALVMLIIVLFSLFWHPISIIVFLLVFVGWLFF 124

Query: 122 YFLRDQPLVLFDQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALTTGTVVVALHAAFRS 181
           YFLRD PLVLF+QTFDDK+VLGVLSI TIIALVSTDVGSNVLGAL TG VVV LHAAFR 
Sbjct: 125 YFLRDDPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVVVVGLHAAFRI 184

Query: 182 TADQFLDLETATQGGLXXXXXXXXXXXXRGYTRI 216
           TAD FLD ETA  GGL            RGYTRI
Sbjct: 185 TADHFLDEETAAGGGL--LSVVGNQQPQRGYTRI 215

[Close]

BLAST of Carg17601 vs. TAIR10
Match: AT1G08770.1 (prenylated RAB acceptor 1.E)

HSP 1 Score: 149.1 bits (375), Expect = 3.2e-36
Identity = 80/158 (50.63%), Postives = 108/158 (68.35%), Query Frame = 0


Query: 42  AKTTTQSLIAKQRPWRELLDFSAFSLPLSSDDAMARIRQNVNYFHVNYAMVMLVIVFFSL 101
           AK TTQS+I   RPWRE+LD SA SLP   D+AMA ++ N++YF  NYA+ +L IVF  L
Sbjct: 36  AKQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGL 95

Query: 102 FWHPTSFFVILLVFVAWLFFYFLRD--QPLVLFDQTFDDKVVLGVLSIFTIIALVSTDVG 161
            +HP S    ++VF+ W+  YF RD    +V+  +  DDK+VL +LS+ T++ALV TDVG
Sbjct: 96  IYHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVG 155

Query: 162 SNVLGALTTGTVVVALHAAFRSTADQFLDLETATQGGL 198
            NVL +L  G ++V  H AFR+T D FLD E+A +GGL
Sbjct: 156 ENVLVSLIIGLLIVGAHGAFRNTDDLFLDEESARRGGL 193

[Close]

BLAST of Carg17601 vs. TAIR10
Match: AT3G13720.1 (PRA1 (Prenylated rab acceptor) family protein)

HSP 1 Score: 139.4 bits (350), Expect = 2.5e-33
Identity = 80/184 (43.48%), Postives = 111/184 (60.33%), Query Frame = 0


Query: 10  YGTVPSPPAATFPTTSGEAPPSFPSSSSFLEHAKTTTQSLIAKQRPWRELLDFSAFSLPL 69
           YG +P         TS  A P     S  L  AK   ++ +A +R WR + DF +  LP 
Sbjct: 4   YGAIP---------TSSHASPLVDVES--LSRAKHRIKAGLATRRAWRVMFDFHSMGLPH 63

Query: 70  SSDDAMARIRQNVNYFHVNYAMVMLVIVFFSLFWHPTSFFVILLVFVAWLFFYFLRDQPL 129
              DA  RI+ N+ YF +NYA+V+L+++FFSL WHPTS  V  ++ V W+F YFLRD+P+
Sbjct: 64  GVSDAFTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPI 123

Query: 130 VLFDQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALTTGTVVVALHAAFRSTADQFLDL 189
            LF    DD+ VL VLS+ T++ L+ T+   N++GAL TG V+V +H+  R T D FLD 
Sbjct: 124 KLFRFQIDDRTVLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDE 176

Query: 190 ETAT 194
           E AT
Sbjct: 184 EAAT 176

[Close]

BLAST of Carg17601 vs. TAIR10
Match: AT1G55190.1 (PRA1 (Prenylated rab acceptor) family protein)

HSP 1 Score: 128.6 bits (322), Expect = 4.5e-30
Identity = 74/183 (40.44%), Postives = 111/183 (60.66%), Query Frame = 0


Query: 10  YGTVPSPPAATFPTTSGEAPPSFPSSSSFLEHAKTTTQSLIAKQRPWRELLDFSAFSLPL 69
           YG +P+            + PS      ++  AK   +S +A +RPW+ + DF + +LP 
Sbjct: 4   YGAIPT-----------SSHPSPAIDLEYISRAKHRIKSGLATRRPWKSMFDFESMTLPH 63

Query: 70  SSDDAMARIRQNVNYFHVNYAMVMLVIVFFSLFWHPTSFFVILLVFVAWLFFYFLRDQPL 129
              DA++RI+ N+ YF  NYA+ +L I+F SL +HPTS  V+ ++ V W+F YFLRD+PL
Sbjct: 64  GFFDAISRIKTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPL 123

Query: 130 VLFDQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALTTGTVVVALHAAFRSTADQFLDL 189
           V+F    DD+ VL  LS+ T++ L+ T   SN+LG+L T  V+V +HAA R + + FLD 
Sbjct: 124 VVFGYQIDDRTVLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLDE 175

Query: 190 ETA 193
           E A
Sbjct: 184 EAA 175

[Close]

BLAST of Carg17601 vs. TAIR10
Match: AT3G13710.1 (prenylated RAB acceptor 1.F4)

HSP 1 Score: 121.3 bits (303), Expect = 7.2e-28
Identity = 73/171 (42.69%), Postives = 99/171 (57.89%), Query Frame = 0


Query: 23  TTSGEAPPSFPSSSSFLEHAKTTTQSLIAKQRPWRELLDFSAFSLPLSSDDAMARIRQNV 82
           TTS  A P+    S  +  AK   +  +A +R WR + D  +  LP    D  +RI+ N+
Sbjct: 8   TTSSHASPAVNHES--ISRAKQRIKDGLATRRSWRVMFDLHSTGLPHGVSDVFSRIKTNL 67

Query: 83  NYFHVNYAMVMLVIVFFSLFWHPTSFFVILLVFVAWLFFYFLRDQPLVLFDQTFDDKVVL 142
            YF  NYA+V+L ++FFSL WHPTS  V   +   W+F YFLRD PL +F    DD+ VL
Sbjct: 68  AYFRSNYAIVILNVIFFSLIWHPTSLIVFTGLVFLWIFLYFLRDVPLKVFRFQIDDRAVL 127

Query: 143 GVLSIFTIIALVSTDVGSNVLGALTTGTVVVALHAAFRSTADQFLDLETAT 194
             LS+ TI+ L+ T+   N++ AL  G V+V +HA  R T D FLD E AT
Sbjct: 128 IGLSVITIVLLLLTNATFNIVAALMAGAVLVLIHAVIRKTDDLFLDEEAAT 176

[Close]

BLAST of Carg17601 vs. TAIR10
Match: AT5G05380.1 (prenylated RAB acceptor 1.B3)

HSP 1 Score: 120.9 bits (302), Expect = 9.4e-28
Identity = 78/190 (41.05%), Postives = 109/190 (57.37%), Query Frame = 0


Query: 15  SPPAATFPTTSG-----EAPPSFPSSSSFLEHAKTTTQSLIAKQRPWRELLDFSAFSLPL 74
           +PP       SG     + P S P+  +FL    ++ +  ++++RPW EL+D SA S P 
Sbjct: 4   NPPTLPISDHSGGGSQSQQPVSTPAFRTFLSRLSSSIRQSLSQRRPWLELVDRSAISRPE 63

Query: 75  SSDDAMARIRQNVNYFHVNYAMVMLVIVFFSLFWHPTSFFVILLVFVAWLFFYFLR--DQ 134
           S  DA +RIR+N+ YF VNY  ++ +++  SL  HP S  V+L +F AW+F Y  R  DQ
Sbjct: 64  SLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSDQ 123

Query: 135 PLVLFDQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALTTGTVVVALHAAFRSTADQFL 194
           PLV+  +TF D+  LGVL I TI+ +  T VGS +  AL  G  +V LH AFR   D FL
Sbjct: 124 PLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPEDLFL 183

Query: 195 DLETATQGGL 198
           D +     GL
Sbjct: 184 DDQEPANTGL 193

[Close]

BLAST of Carg17601 vs. Swiss-Prot
Match: sp|Q9FRR1|PRA1E_ARATH (PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.8e-35
Identity = 80/158 (50.63%), Postives = 108/158 (68.35%), Query Frame = 0


Query: 42  AKTTTQSLIAKQRPWRELLDFSAFSLPLSSDDAMARIRQNVNYFHVNYAMVMLVIVFFSL 101
           AK TTQS+I   RPWRE+LD SA SLP   D+AMA ++ N++YF  NYA+ +L IVF  L
Sbjct: 36  AKQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGL 95

Query: 102 FWHPTSFFVILLVFVAWLFFYFLRD--QPLVLFDQTFDDKVVLGVLSIFTIIALVSTDVG 161
            +HP S    ++VF+ W+  YF RD    +V+  +  DDK+VL +LS+ T++ALV TDVG
Sbjct: 96  IYHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVG 155

Query: 162 SNVLGALTTGTVVVALHAAFRSTADQFLDLETATQGGL 198
            NVL +L  G ++V  H AFR+T D FLD E+A +GGL
Sbjct: 156 ENVLVSLIIGLLIVGAHGAFRNTDDLFLDEESARRGGL 193

[Close]

BLAST of Carg17601 vs. Swiss-Prot
Match: sp|Q9LIC6|PR1F3_ARATH (PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 4.6e-32
Identity = 80/184 (43.48%), Postives = 111/184 (60.33%), Query Frame = 0


Query: 10  YGTVPSPPAATFPTTSGEAPPSFPSSSSFLEHAKTTTQSLIAKQRPWRELLDFSAFSLPL 69
           YG +P         TS  A P     S  L  AK   ++ +A +R WR + DF +  LP 
Sbjct: 4   YGAIP---------TSSHASPLVDVES--LSRAKHRIKAGLATRRAWRVMFDFHSMGLPH 63

Query: 70  SSDDAMARIRQNVNYFHVNYAMVMLVIVFFSLFWHPTSFFVILLVFVAWLFFYFLRDQPL 129
              DA  RI+ N+ YF +NYA+V+L+++FFSL WHPTS  V  ++ V W+F YFLRD+P+
Sbjct: 64  GVSDAFTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPI 123

Query: 130 VLFDQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALTTGTVVVALHAAFRSTADQFLDL 189
            LF    DD+ VL VLS+ T++ L+ T+   N++GAL TG V+V +H+  R T D FLD 
Sbjct: 124 KLFRFQIDDRTVLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDE 176

Query: 190 ETAT 194
           E AT
Sbjct: 184 EAAT 176

[Close]

BLAST of Carg17601 vs. Swiss-Prot
Match: sp|Q9C889|PR1F2_ARATH (PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 8.1e-29
Identity = 74/183 (40.44%), Postives = 111/183 (60.66%), Query Frame = 0


Query: 10  YGTVPSPPAATFPTTSGEAPPSFPSSSSFLEHAKTTTQSLIAKQRPWRELLDFSAFSLPL 69
           YG +P+            + PS      ++  AK   +S +A +RPW+ + DF + +LP 
Sbjct: 4   YGAIPT-----------SSHPSPAIDLEYISRAKHRIKSGLATRRPWKSMFDFESMTLPH 63

Query: 70  SSDDAMARIRQNVNYFHVNYAMVMLVIVFFSLFWHPTSFFVILLVFVAWLFFYFLRDQPL 129
              DA++RI+ N+ YF  NYA+ +L I+F SL +HPTS  V+ ++ V W+F YFLRD+PL
Sbjct: 64  GFFDAISRIKTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPL 123

Query: 130 VLFDQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALTTGTVVVALHAAFRSTADQFLDL 189
           V+F    DD+ VL  LS+ T++ L+ T   SN+LG+L T  V+V +HAA R + + FLD 
Sbjct: 124 VVFGYQIDDRTVLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLDE 175

Query: 190 ETA 193
           E A
Sbjct: 184 EAA 175

[Close]

BLAST of Carg17601 vs. Swiss-Prot
Match: sp|Q9LIC7|PR1F4_ARATH (PRA1 family protein F4 OS=Arabidopsis thaliana OX=3702 GN=PRA1F4 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-26
Identity = 73/171 (42.69%), Postives = 99/171 (57.89%), Query Frame = 0


Query: 23  TTSGEAPPSFPSSSSFLEHAKTTTQSLIAKQRPWRELLDFSAFSLPLSSDDAMARIRQNV 82
           TTS  A P+    S  +  AK   +  +A +R WR + D  +  LP    D  +RI+ N+
Sbjct: 8   TTSSHASPAVNHES--ISRAKQRIKDGLATRRSWRVMFDLHSTGLPHGVSDVFSRIKTNL 67

Query: 83  NYFHVNYAMVMLVIVFFSLFWHPTSFFVILLVFVAWLFFYFLRDQPLVLFDQTFDDKVVL 142
            YF  NYA+V+L ++FFSL WHPTS  V   +   W+F YFLRD PL +F    DD+ VL
Sbjct: 68  AYFRSNYAIVILNVIFFSLIWHPTSLIVFTGLVFLWIFLYFLRDVPLKVFRFQIDDRAVL 127

Query: 143 GVLSIFTIIALVSTDVGSNVLGALTTGTVVVALHAAFRSTADQFLDLETAT 194
             LS+ TI+ L+ T+   N++ AL  G V+V +HA  R T D FLD E AT
Sbjct: 128 IGLSVITIVLLLLTNATFNIVAALMAGAVLVLIHAVIRKTDDLFLDEEAAT 176

[Close]

BLAST of Carg17601 vs. Swiss-Prot
Match: sp|Q9FLB6|PR1B3_ARATH (PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.7e-26
Identity = 78/190 (41.05%), Postives = 109/190 (57.37%), Query Frame = 0


Query: 15  SPPAATFPTTSG-----EAPPSFPSSSSFLEHAKTTTQSLIAKQRPWRELLDFSAFSLPL 74
           +PP       SG     + P S P+  +FL    ++ +  ++++RPW EL+D SA S P 
Sbjct: 4   NPPTLPISDHSGGGSQSQQPVSTPAFRTFLSRLSSSIRQSLSQRRPWLELVDRSAISRPE 63

Query: 75  SSDDAMARIRQNVNYFHVNYAMVMLVIVFFSLFWHPTSFFVILLVFVAWLFFYFLR--DQ 134
           S  DA +RIR+N+ YF VNY  ++ +++  SL  HP S  V+L +F AW+F Y  R  DQ
Sbjct: 64  SLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSDQ 123

Query: 135 PLVLFDQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALTTGTVVVALHAAFRSTADQFL 194
           PLV+  +TF D+  LGVL I TI+ +  T VGS +  AL  G  +V LH AFR   D FL
Sbjct: 124 PLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPEDLFL 183

Query: 195 DLETATQGGL 198
           D +     GL
Sbjct: 184 DDQEPANTGL 193

[Close]

BLAST of Carg17601 vs. TrEMBL
Match: tr|A0A0A0LIB9|A0A0A0LIB9_CUCSA (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_2G010300 PE=3 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 1.4e-78
Identity = 167/215 (77.67%), Postives = 175/215 (81.40%), Query Frame = 0


Query: 1   MSRVKFAAVYGTVPSPPAATFPTTSGEAPPSFPSSSSFLEHAKTTTQSLIAKQRPWRELL 60
           MS VKF++ YG VPS  AAT PTTS  APPSFPSSSSFLE AKTTTQSLIA QRPWREL 
Sbjct: 1   MSSVKFSSGYGAVPSQAAATIPTTSSGAPPSFPSSSSFLERAKTTTQSLIATQRPWRELF 60

Query: 61  DFSAFSLPLSSDDAMARIRQNVNYFHVNYAMVMLVIVFFSLFWHPTSFFVILLVFVAWLF 120
           DFSAFSLP S DDAMARIRQNVNYF VNYA+VML+IVF SLFWHP S  V LL+FVAWLF
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLF 120

Query: 121 FYFLRDQPLVLFDQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALTTGTVVVALHAAFR 180
           FYF RDQPLVLF+QTFDDKVVLGVLSIFTIIALVSTDVGSNVLGAL TG  VV LH+AFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVTVVGLHSAFR 180

Query: 181 STADQFLDLETATQGGLXXXXXXXXXXXXRGYTRI 216
            TAD FLD ETA +GGL            RGYTRI
Sbjct: 181 ITADHFLDEETAAEGGL--LSVVGNQQQQRGYTRI 213

[Close]

BLAST of Carg17601 vs. TrEMBL
Match: tr|A0A1S3C2L3|A0A1S3C2L3_CUCME (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103496149 PE=3 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.1e-70
Identity = 156/215 (72.56%), Postives = 163/215 (75.81%), Query Frame = 0


Query: 1   MSRVKFAAVYGTVPSPPAATFPTTSGEAPPSFPSSSSFLEHAKTTTQSLIAKQRPWRELL 60
           MS VKF++ YG VPSP AAT PT              FLE AKTTTQSLIA  RPWREL 
Sbjct: 1   MSSVKFSSGYGAVPSPAAATIPTXXXXXXXXXXXXXXFLERAKTTTQSLIATLRPWRELF 60

Query: 61  DFSAFSLPLSSDDAMARIRQNVNYFHVNYAMVMLVIVFFSLFWHPTSFFVILLVFVAWLF 120
           DFSAFSLP S DDAMARIRQNVNYF VNYA+VML+IVF SLFWHP S  V LL+FVAWLF
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLF 120

Query: 121 FYFLRDQPLVLFDQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALTTGTVVVALHAAFR 180
           FYF RDQPLVLF+QTFDDKVVLGVLSIFTIIALVSTDVGSNVLGAL TG  VV LHAAFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180

Query: 181 STADQFLDLETATQGGLXXXXXXXXXXXXRGYTRI 216
            TAD FLD ETA +GGL            RGYTRI
Sbjct: 181 ITADHFLDEETAAEGGL--LSVVGNQQQQRGYTRI 213

[Close]

BLAST of Carg17601 vs. TrEMBL
Match: tr|A5AWF7|A5AWF7_VITVI (PRA1 family protein OS=Vitis vinifera OX=29760 GN=VITISV_021777 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 7.8e-45
Identity = 109/199 (54.77%), Postives = 134/199 (67.34%), Query Frame = 0


Query: 4   VKFAAVYGTVPSPPAATFPTTSGEAPPSFPSSS-----SFLEHAKTTTQSLIAKQRPWRE 63
           +K  A YGT+P+            A P+ PSSS     +F+  A   TQ+L+A +RPWRE
Sbjct: 3   LKSPAGYGTLPN------------ASPAVPSSSTSEQFTFISRATQRTQTLMATRRPWRE 62

Query: 64  LLDFSAFSLPLSSDDAMARIRQNVNYFHVNYAMVMLVIVFFSLFWHPTSFFVILLVFVAW 123
            LD+SA S P +  DAMARI++NVNYF VNYAMVML I+F SL WHPTS  V L++FVAW
Sbjct: 63  FLDYSALSRPHNYSDAMARIKRNVNYFRVNYAMVMLFILFVSLLWHPTSMIVFLIIFVAW 122

Query: 124 LFFYFLRDQPLVLFDQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALTTGTVVVALHAA 183
            F YF RD P+VLF QT DD+VVL +L + T++ALV TDVG NVL +L  G  VV LHAA
Sbjct: 123 FFLYFFRDNPVVLFHQTIDDRVVLVLLGLITVVALVFTDVGLNVLVSLIIGVAVVGLHAA 182

Query: 184 FRSTADQFLDLETATQGGL 198
           FR T D FL+ E   +GGL
Sbjct: 183 FRGTEDLFLNEEEVAEGGL 189

[Close]

BLAST of Carg17601 vs. TrEMBL
Match: tr|F6HVL4|F6HVL4_VITVI (PRA1 family protein OS=Vitis vinifera OX=29760 GN=VIT_14s0081g00090 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.9e-44
Identity = 105/194 (54.12%), Postives = 132/194 (68.04%), Query Frame = 0


Query: 4   VKFAAVYGTVPSPPAATFPTTSGEAPPSFPSSSSFLEHAKTTTQSLIAKQRPWRELLDFS 63
           +K  A YGT+P+  AA   +++ E         +F+  A   TQ+L+A +RPWRE LD+S
Sbjct: 3   LKSPAGYGTLPNASAAVPSSSTSE-------QFTFISRATQRTQTLMATRRPWREFLDYS 62

Query: 64  AFSLPLSSDDAMARIRQNVNYFHVNYAMVMLVIVFFSLFWHPTSFFVILLVFVAWLFFYF 123
             S P +  DAMARI++NVNYF VNYAMVML I+F SL WHPTS  V L++FVAW F YF
Sbjct: 63  VLSRPHNYSDAMARIKRNVNYFRVNYAMVMLFILFVSLLWHPTSMIVFLIIFVAWFFLYF 122

Query: 124 LRDQPLVLFDQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALTTGTVVVALHAAFRSTA 183
            RD P+VLF QT DD+VVL +L + T++ALV TDVG NVL +L  G  VV LHAAFR T 
Sbjct: 123 FRDNPVVLFHQTIDDRVVLVLLGLITVVALVFTDVGLNVLVSLIIGVAVVGLHAAFRGTE 182

Query: 184 DQFLDLETATQGGL 198
           D FL+ E   +GGL
Sbjct: 183 DLFLNEEEVAEGGL 189

[Close]

BLAST of Carg17601 vs. TrEMBL
Match: tr|B9SZ60|B9SZ60_RICCO (PRA1 family protein OS=Ricinus communis OX=3988 GN=RCOM_0484380 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 8.7e-44
Identity = 107/216 (49.54%), Postives = 141/216 (65.28%), Query Frame = 0


Query: 1   MSRVKFAAVYGTVPSPPAATFPTTSGEAPPSFPSSSSFLEHAKTTTQSLIAKQRPWRELL 60
           MS    A VYGT+P+           +  P+  +S +F+  A + TQS+IA +RPW+ELL
Sbjct: 1   MSLKSPAGVYGTIPATXXXXXXXXFSQPLPTTATSLTFISRATSATQSVIATRRPWKELL 60

Query: 61  DFSAFSLPLSSDDAMARIRQNVNYFHVNYAMVMLVIVFFSLFWHPTSFFVILLVFVAWLF 120
           + S+FS P +  +AM+R++ NVNYF VNYAMV+L ++F SL WHP S  V ++VF+AW F
Sbjct: 61  NPSSFSCPCNYSEAMSRVKYNVNYFRVNYAMVVLSVLFLSLLWHPVSMIVFIVVFIAWFF 120

Query: 121 FYFLRDQPLVLFDQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALTTGTVVVALHAAFR 180
            YF RD P+VLF++ FDD+VVL VL + TI+ALV T VG NVL AL  G VVV +H AFR
Sbjct: 121 LYFSRDGPIVLFNREFDDRVVLVVLGLVTIVALVLTHVGLNVLVALMIGAVVVGIHGAFR 180

Query: 181 STADQFLDLETATQGG-LXXXXXXXXXXXXRGYTRI 216
           +T D FLD E+A +GG L             GYTRI
Sbjct: 181 NTEDLFLDEESAAEGGLLSVVGSQPLRPTTTGYTRI 216

The following BLAST results are available for this feature:

BLAST of Carg17601 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937618.1	4.0e-101	100.00	PRA1 family protein F3-like [Cucurbita moschata] >XP_022937619.1 PRA1 family pro...	[more]
XP_022965927.1	3.9e-96	91.63	PRA1 family protein F3-like [Cucurbita maxima] >XP_022965928.1 PRA1 family prote...	[more]
XP_023538284.1	1.6e-94	97.44	PRA1 family protein F3-like [Cucurbita pepo subsp. pepo] >XP_023538285.1 PRA1 fa...	[more]
XP_004139244.1	2.1e-78	77.67	PREDICTED: PRA1 family protein E-like [Cucumis sativus] >KGN60794.1 hypothetical...	[more]
XP_022142976.1	9.3e-74	76.17	PRA1 family protein E [Momordica charantia]	[more]

BLAST of Carg17601 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08770.1	3.2e-36	50.63	prenylated RAB acceptor 1.E	[more]
AT3G13720.1	2.5e-33	43.48	PRA1 (Prenylated rab acceptor) family protein	[more]
AT1G55190.1	4.5e-30	40.44	PRA1 (Prenylated rab acceptor) family protein	[more]
AT3G13710.1	7.2e-28	42.69	prenylated RAB acceptor 1.F4	[more]
AT5G05380.1	9.4e-28	41.05	prenylated RAB acceptor 1.B3	[more]

BLAST of Carg17601 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FRR1\|PRA1E_ARATH	5.8e-35	50.63	PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1	[more]
sp\|Q9LIC6\|PR1F3_ARATH	4.6e-32	43.48	PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1	[more]
sp\|Q9C889\|PR1F2_ARATH	8.1e-29	40.44	PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1	[more]
sp\|Q9LIC7\|PR1F4_ARATH	1.3e-26	42.69	PRA1 family protein F4 OS=Arabidopsis thaliana OX=3702 GN=PRA1F4 PE=2 SV=1	[more]
sp\|Q9FLB6\|PR1B3_ARATH	1.7e-26	41.05	PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1	[more]

BLAST of Carg17601 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LIB9\|A0A0A0LIB9_CUCSA	1.4e-78	77.67	PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_2G010300 PE=3 SV=1	[more]
tr\|A0A1S3C2L3\|A0A1S3C2L3_CUCME	1.1e-70	72.56	PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103496149 PE=3 SV=1	[more]
tr\|A5AWF7\|A5AWF7_VITVI	7.8e-45	54.77	PRA1 family protein OS=Vitis vinifera OX=29760 GN=VITISV_021777 PE=3 SV=1	[more]
tr\|F6HVL4\|F6HVL4_VITVI	3.9e-44	54.12	PRA1 family protein OS=Vitis vinifera OX=29760 GN=VIT_14s0081g00090 PE=3 SV=1	[more]
tr\|B9SZ60\|B9SZ60_RICCO	8.7e-44	49.54	PRA1 family protein OS=Ricinus communis OX=3988 GN=RCOM_0484380 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004895	Prenylated_rab_accept_PRA1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17601-RA	Carg17601-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 50..188 e-value: 7.2E-44 score: 148.8
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 16..215
None	No IPR available	PANTHER	PTHR19317:SF16	PRA1 FAMILY PROTEIN E	coord: 16..215

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17601	Cla019796	Watermelon (97103) v1	carwmB0714
Carg17601	Csa2G010300	Cucumber (Chinese Long) v2	carcuB0735
Carg17601	MELO3C004391	Melon (DHL92) v3.5.1	carmeB0711
Carg17601	ClCG02G016740	Watermelon (Charleston Gray)	carwcgB0692
Carg17601	CSPI02G02850	Wild cucumber (PI 183967)	carcpiB0751
Carg17601	Cucsa.133150	Cucumber (Gy14) v1	carcgyB0804
Carg17601	CmaCh05G012110	Cucurbita maxima (Rimu)	carcmaB1001
Carg17601	CmaCh12G011270	Cucurbita maxima (Rimu)	carcmaB1000
Carg17601	CmoCh05G012330	Cucurbita moschata (Rifu)	carcmoB0974
Carg17601	CmoCh12G011470	Cucurbita moschata (Rifu)	carcmoB0973
Carg17601	Lsi11G004350	Bottle gourd (USVL1VR-Ls)	carlsiB654
Carg17601	Cp4.1LG00g04290	Cucurbita pepo (Zucchini)	carcpeB1003
Carg17601	Cp4.1LG07g09520	Cucurbita pepo (Zucchini)	carcpeB1006
Carg17601	CsGy2G002960	Cucumber (Gy14) v2	carcgybB0713
Carg17601	MELO3C004391.2	Melon (DHL92) v3.6.1	carmedB0724
Carg17601	CsaV3_2G004000	Cucumber (Chinese Long) v3	carcucB0754
Carg17601	Cla97C02G042520	Watermelon (97103) v2	carwmbB0746
Carg17601	Bhi06G001532	Wax gourd	carwgoB0841

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg17601	Carg22989	Silver-seed gourd	carcarB588

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17601	Cucurbita pepo (Zucchini)	carcpeB1005