Cucsa.132860 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.132860
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Zinc knuckle family protein
Location	scaffold01037 : 708024 .. 712930 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAAAACACTTACTTCAATTTCTCCACACAAAAGTTAATTCCAAATTTCCATATCCCCATCGGATCGGATCCAACATGGAGAAGGACAACAACGCCGTCCCAGCGCCGACGGGATGCTTCAAGTGCGGGAAGCCGGGCCACTGGTCTCGTGATTGCCCTTCCTCCGCTCCAAATCCCAATCCTACTTCCAATTCTTCCACACCTTCTTTCTCCTCTCCTCCTGCTGCTCCTTCAAAAGCTGTAGAGAAGCCAAAGAAAGCCCCCAGAACCAGGCCCAAGCTCACTCCTGAGCTACTCCTTTCCGACGATGGTCTAGGTTACGTCCTTCGCCATTTTCCTCGTGCTTTCAAGTATCGTGGCCGTGGACACGAGGTTATCTTCTATTTTTCTTCCCATTCTAACTTAATTAGTTCATTTGTTCCCATCTGGCATATATGAGTTTTGTTTGAGTTATATTTCAACATTGCTGTTCAACAACAAATGGGGTTTCGAAAATAATATAGTAATTACAGTCTGGTGCGTTCTATGGTCTACGTTTTTGTTACGAATTCGAGCATCAAAGGAAACAGTAAACGTAAATGGTAGAATAATCGAAAGGTGGTTCACTAACTATTTTAACATCATCTAAGTGCAGTGGTAGAGATCAACTATATTATCAGAGATAAACGTCGGATTACAGATTATAGAGAGCTTATAAAGTCTATATACAGTGCATTAAACTATTCTAAACCTTAGAGCCAAAATTGTAAATAATATAAATATGAATACAACCAACACCCATAAACCCCAATCTAGGCTTGTAGACCCAGACTTATTGATCGGTTAGCGAGATCCAGTGATTGGTCATTCAAAGCAGCAAGTAAAAAATTAAGACATTGCTGTATAATTAGAAACAATTTTAATGCGCATACATATTTCAATGAAGAATTGTTTGAGAGAGCCCAAGCTTCGTCAGGGGAAATCGGTACTTACCCGTAATGGTTTGTTTATTGGAAATCCGGTTTCAAACTTTTTTCCATTGAATTATAGCCATGTGTATTTCATCAACAATGTGTACGTACATGTATAATTTTTCTTATTACGGTGTCGTTGTCTCATCCATTGTCATTTTCTAATGATTTGATTATTGCACTAATCGAGATATACTTTTGACTGGTGTTTTGCAGATCAATGATTTGGAAAATCTTATTGGATTATACAGGGAATGGCATTCTCATATACTCCCCTATTACTCTTTCGAGCATTTTGTACATAAGGTGGAACAAGTAGCTGCTACGAAACGTGTAAAGGTAAAAATGACTGTTTTTTGTTCTTTTACAATGAGCGTATCACAGAGGTGTACATACATGGCTTCAAAATACATAAGTTTAGCCTAATAGCATACTGTGATACTAGTATTGATAGAATTTGATCTAAAGGAACTGCTCTTAAGAAACCCAGTGCATCTGAAGGGAGTAGAGACAGAGAGTGTGAACTCCGTAATATTTTAACTGAATCCTTATTTTTTAAATCAGATCAACACGGAGCAAGTTTGTTTATTAAATGATATCTAATTTGTAATGAATTGGCGTTCTTACTAAAAAGACATTTTGATCAGATGTGTCTTGGAGAACTAAGAGAGAGAGTTGCCAGGGGAGGGGATCCTACAAAGTGGCGTGAGGCACCAATTTTAAATGATGATGATGATGATGTCAACAATGAAAAAGGTACCTTCTAGTATTCTCATTTATTAGAAGACACATATATTTTCATCCTATTTGGTCAAATTGTGTTTGTGTTTAGTAAGTTAATCATTGCCCTCTCATTCTGTTTAAAAAAATTAAATATGGTTTAGATAAATTTGAAGTCGACTGAACTGCCAATATAATGAAGCAAGCAACAATTACTATCGTTGTTTTTCATGTCCCACTCCCACCAGACAGCTCCATATAAAATTGTCGTTCTCAGATTTGCGTTGGTAGAACGATGTTGGCTTGGGCTCAATCTATCTGAGTGTATTTAAGGGGCTGGTTGGTATCAATAAGCTTAATTATGATGGAGAACACACCCTCTGGTGAGGAGTTGTATGTGGCTTTTGTTTTTCATTAGCCATTACTTATCTTCATCTTCCGTCAATATATTGCCTCCGTCGAACTTCTCATCTTTCTTAGGCATTGGTATCCAAATCTTTTTTCCGTTGAGTCACATTTTACTAGATTGGGGCTTATTATAGTTGGCCCTTCTTGACGTGGACTTCTCCGTTTTGTTTGTCTATGTATACTTTCTTACTTTCATTCTAAGAAGCACAGACACGAGATACGAAAACGACATGATACAGACACGACGGCACACCATATTTTAAAAATCTAGGACACGACACAGCAAGGACACGTTTATTAAAATATCATATTAAAAGTATATATATCATTTTTATAGTAAAAGAAAATTCATAGTAAATGAATTGATGCATTTATATGTTTAAAAGACTTAGCATGATGTATCTCATGTCCAAAAATTATTATTATTGTCATATATGTGTCTTTTTAGCCTACTCAATGAGTGTTCTATGCATATCTAATACATTTGTTGCACTAACAAGTGTCCGAAAGGTGTCCGCCAAGTGTCAAAGTGCCTAAGTGTCCGACACGGTTACACTATCCAAACTGAAGTGTCCGACACGGTTACACTATCCAAACTGAAGTGTCCATGCTTCTTAGCTTTCATTTCTTCTTAGCTTTCATTTCTTGTCAATGAAAGTTAAGTTTTTTAATTTAAAATGTCGTGGATACATCGGGAAAGTGGAAAAACTTCACAATCTTTTTAAGATACATAAGTTACCATCTCATTCATAATTGATTTTGAGATGGAATGAAAAGGAACTTCTCATCTTCCTCTATTCATTCATACGCTTGGGAATTTTGATAACAATATAAACCTTTGCCAACTGGGGCTTAGTTCGAAATACCCTCTAACCCTTTGGCATCTGGATGCCCACTTTAGTATGCACTAAGCAGTTGGTGCTTGGGATGGGTATATTGTATCAGAATGTTGTCAGTAATTAATAGTTATGTTGGATTCATAATTTTCTTTGTACTTTGTGGTATGGTATGATGCTGGCTGTGTGGTTAGAAATGTAACTTAGGAATTTAAATTCATCTACTTGAGTATTTTCTAATTTCTCATGTGTGAAACAATTCTCTGATGTGATGATTGGAAAAGATTTTTAGATCCTGAGGCTAATCATTATTTGATTACCCCTCTGCTTGAAATTTAAACCCGTCTGCCAATCCTTGCAGAAGCCAAGGATCCGGATGATGTATTCGATAATCAGGAAGAGGCGTCTTTGAGGAATAATGGTGCTGATGACATTGAAGAGGACATGCTTCAGGAAGTTTATGAGAAAGCTACGGAAGTAAGTCTTTCTTTGTTCATTTCTTTTTCTTCTGAACAATTGGTTGGTTTCCATCCCTACCATTGTTTTAGTTTCAATCATATTCTTACTAAGAAAAGCGTCGTAATTACTGAATTGAACGAAGAAATTTTACCACGAGTCATAAATGTAGATTTCCGGAATATTCATAGTGAAGCAAACTATGTTTCTTGAGCCCTTTACTTGGCAGACCAATTTTCCAGATGAAATTGTCAGGTCGTTTATCAAAAAATATATATGTTACTGCACCCCCCCCCCCATTAACTAAAATTTGCGCTTAAAGCTTATTTTTATCAGGTCTATAATTTCTTTTGTTAGGGATAAAACCAATTTATATCCCTAAAATGTTGTACTCTTATAACTCCAAACTAATAATTCTGTAAGTTTAAACCCCAACTTTCAAATCAATTTAGATGAATTGTTAGTGATTTATAGCTACTTTCACTCAATTCCAATATAAGATCAAAACCACATAAATATAATTATTCTTCTCCCAAGTCCCATCGCACCTAAGTAGCAAGAAAACTTGTCATGTGACTCTTTCCAATTAAGTAAAGAAAAATAGAGCGAGTCTAGAAGATGAAATCATTCAAAGTTCCTGAAAATAGCACCGCCATTTATTACCTTACTGCATTTCTCTCATTTACATCTGTCCTTGTATATGGAGAAGCTTCATTCATAGGTGAAAGTTATGAAGTGTGATACAAGTACGAAGAAGTTTTATACACGGGTGAAAGCTATGCATTAAACGGTTTTCACCTAAGCTCTTTGGGCAAAACCCTTGTGCATATACTAACGATATCTATCGATGGAACCTTCCACTGGATGAGAAACTTGAAGCAAGAATACCTCCATTATATTATCTAGCATTTGTATAATCTCTAACTAGAGATTGCTTGTTTTTTTTATGACAAACATTGGAAATTATAGGATTGCCCAGAAGATTACATAAAACAATTCCAATATGACCTAAGAGAACTCAAATTTGTTGAAACCCAACACCATTTCCTGACGTATTACCCGACGATCTACAACTGATTGCTGATTTTATTTACATGGTTGTAGGAACCGTTGCAGAATGAACAAAGTGATTCCTTAACCATTGGTGGAACTATGGAAGGTGTGGCCAACCAAGAACCCAACCAAGAACCAAAGACTAGCAATTCAAGTGAAACAAGTGAGCTCACAGAGGAACAGAGAGTTCGAATGGAAGCAAACAGGTTGAAGGCCTTAGAAAGAGCTGCAGCCAAGGCCCGCTCGTTGCCTACTGTTTAGATAAACATTCAAAGTGATGGTTTTTGGCTTGGAAAGGTTCAACCACCTTAGGGAGTTTCTTCCTTAAACCTCCAATTTTTTCCCTAAATTTCGACGAATGAGTCCTTGGAATGTCAATTCGGAATTTTAGATGCTCATTTTGAAAGGTTTATATTAAATTGTTAATCATATGAGCCTGCATTGTAAATTAATAATTTTAAGTTTATAAATCATTTTCTTTTGT

mRNA sequence

ACAAAACACTTACTTCAATTTCTCCACACAAAAGTTAATTCCAAATTTCCATATCCCCATCGGATCGGATCCAACATGGAGAAGGACAACAACGCCGTCCCAGCGCCGACGGGATGCTTCAAGTGCGGGAAGCCGGGCCACTGGTCTCGTGATTGCCCTTCCTCCGCTCCAAATCCCAATCCTACTTCCAATTCTTCCACACCTTCTTTCTCCTCTCCTCCTGCTGCTCCTTCAAAAGCTGTAGAGAAGCCAAAGAAAGCCCCCAGAACCAGGCCCAAGCTCACTCCTGAGCTACTCCTTTCCGACGATGGTCTAGGTTACGTCCTTCGCCATTTTCCTCGTGCTTTCAAGTATCGTGGCCGTGGACACGAGATCAATGATTTGGAAAATCTTATTGGATTATACAGGGAATGGCATTCTCATATACTCCCCTATTACTCTTTCGAGCATTTTGTACATAAGGTGGAACAAGTAGCTGCTACGAAACGTGTAAAGATGTGTCTTGGAGAACTAAGAGAGAGAGTTGCCAGGGGAGGGGATCCTACAAAGTGGCGTGAGGCACCAATTTTAAATGATGATGATGATGATGTCAACAATGAAAAAGAAGCCAAGGATCCGGATGATGTATTCGATAATCAGGAAGAGGCGTCTTTGAGGAATAATGGTGCTGATGACATTGAAGAGGACATGCTTCAGGAAGTTTATGAGAAAGCTACGGAAGAACCGTTGCAGAATGAACAAAGTGATTCCTTAACCATTGGTGGAACTATGGAAGGTGTGGCCAACCAAGAACCCAACCAAGAACCAAAGACTAGCAATTCAAGTGAAACAAGTGAGCTCACAGAGGAACAGAGAGTTCGAATGGAAGCAAACAGGTTGAAGGCCTTAGAAAGAGCTGCAGCCAAGGCCCGCTCGTTGCCTACTGTTTAGATAAACATTCAAAGTGATGGTTTTTGGCTTGGAAAGGTTCAACCACCTTAGGGAGTTTCTTCCTTAAACCTCCAATTTTTTCCCTAAATTTCGACGAATGAGTCCTTGGAATGTCAATTCGGAATTTTAGATGCTCATTTTGAAAGGTTTATATTAAATTGTTAATCATATGAGCCTGCATTGTAAATTAATAATTTTAAGTTTATAAATCATTTTCTTTTGT

Coding sequence (CDS)

ATGGAGAAGGACAACAACGCCGTCCCAGCGCCGACGGGATGCTTCAAGTGCGGGAAGCCGGGCCACTGGTCTCGTGATTGCCCTTCCTCCGCTCCAAATCCCAATCCTACTTCCAATTCTTCCACACCTTCTTTCTCCTCTCCTCCTGCTGCTCCTTCAAAAGCTGTAGAGAAGCCAAAGAAAGCCCCCAGAACCAGGCCCAAGCTCACTCCTGAGCTACTCCTTTCCGACGATGGTCTAGGTTACGTCCTTCGCCATTTTCCTCGTGCTTTCAAGTATCGTGGCCGTGGACACGAGATCAATGATTTGGAAAATCTTATTGGATTATACAGGGAATGGCATTCTCATATACTCCCCTATTACTCTTTCGAGCATTTTGTACATAAGGTGGAACAAGTAGCTGCTACGAAACGTGTAAAGATGTGTCTTGGAGAACTAAGAGAGAGAGTTGCCAGGGGAGGGGATCCTACAAAGTGGCGTGAGGCACCAATTTTAAATGATGATGATGATGATGTCAACAATGAAAAAGAAGCCAAGGATCCGGATGATGTATTCGATAATCAGGAAGAGGCGTCTTTGAGGAATAATGGTGCTGATGACATTGAAGAGGACATGCTTCAGGAAGTTTATGAGAAAGCTACGGAAGAACCGTTGCAGAATGAACAAAGTGATTCCTTAACCATTGGTGGAACTATGGAAGGTGTGGCCAACCAAGAACCCAACCAAGAACCAAAGACTAGCAATTCAAGTGAAACAAGTGAGCTCACAGAGGAACAGAGAGTTCGAATGGAAGCAAACAGGTTGAAGGCCTTAGAAAGAGCTGCAGCCAAGGCCCGCTCGTTGCCTACTGTTTAG

Protein sequence

MEKDNNAVPAPTGCFKCGKPGHWSRDCPSSAPNPNPTSNSSTPSFSSPPAAPSKAVEKPKKAPRTRPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDDVNNEKEAKDPDDVFDNQEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTIGGTMEGVANQEPNQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLPTV*

Homology

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BLAST of Cucsa.132860 vs. Swiss-Prot
Match: TIPIN_RAT (TIMELESS-interacting protein OS=Rattus norvegicus GN=Tipin PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.1e-12
Identity = 63/226 (27.88%), Postives = 96/226 (42.48%), Query Frame = 1


Query: 32  PNPNPTSNSSTPSFSSPPAAPSKAVEKPKK--APRTRPKLTPELLLSDDGLGYVLRHFPR 91
           P P P S    P+ + P       V  P K    R  PKL    L S+ GL   LRH   
Sbjct: 25  PFPPPGSPERDPAEAEPDEGSGAPVPVPPKRIVKRNIPKLDATRLTSERGLP-ALRHVFD 84

Query: 92  AFKYRGRGHEINDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRER 151
             K++G+GHE  DL+ LI     W   + P   FE F+ +VE +   K V+ CL  +R  
Sbjct: 85  KTKFKGKGHEAEDLKTLIRHMEHWAHRLFPKLQFEDFIDRVENLGNKKEVQTCLKRIRLD 144

Query: 152 VARGGDPTKWREAPILNDDDDDVNNEKEAKDPDDVFDNQEEASLR--NNGADDIEEDMLQ 211
           +     P    +    ND+ ++ N+   A    D F      S R  +  + ++ E+  Q
Sbjct: 145 L-----PIVHEDFVNNNDEVEETNSLDAAATGFDAFVTSSSDSKRFASEASRNLTEEQQQ 204

Query: 212 EVYEKATEEPLQNEQSDSLTIGGTMEGVANQEPNQEPKTSNSSETS 254
            + EK  +  L+  Q+  L+   ++E   N    +E  T  + E S
Sbjct: 205 RI-EKNKQLALERRQAKLLSNSQSLE---NDVTVEESSTGENQEES 240

HSP 2 Score: 30.8 bits (68), Expect = 3.0e+01
Identity = 17/40 (42.50%), Postives = 23/40 (57.50%), Query Frame = 1


Query: 241 NQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARS 281
           + + K   S  +  LTEEQ+ R+E N+  ALER  AK  S
Sbjct: 178 SSDSKRFASEASRNLTEEQQQRIEKNKQLALERRQAKLLS 217

[Close]

BLAST of Cucsa.132860 vs. Swiss-Prot
Match: TIPIN_BOVIN (TIMELESS-interacting protein OS=Bos taurus GN=TIPIN PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.0e-12
Identity = 69/276 (25.00%), Postives = 114/276 (41.30%), Query Frame = 1


Query: 32  PNPNPTS------NSSTPSFSSPPAAPSKAVEKPKKAPRTRPKLTPELLLSDDGLGYVLR 91
           P P P S        + P   S   AP     K +   R  PKL  E L+S+ GL   LR
Sbjct: 25  PFPPPASPGREDGEGAEPEEESGRGAPVPVPPK-RTVKRNIPKLNAERLISERGLP-ALR 84

Query: 92  HFPRAFKYRGRGHEINDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGE 151
           H     K++G+GHE  DL+ LI     W   + P   FE F+ +VE +   K V+ CL  
Sbjct: 85  HVFEKAKFKGKGHEAEDLKTLIRHMEHWAHRLFPKLQFEDFIDRVECLGNKKEVQTCLKR 144

Query: 152 LRERVARGGDPTKWREAPILNDDDDDVNNEKEAKDPDDVFDNQEEASLRNN-GADDIEED 211
           +R             + PIL++D    N+E E  +  DV   + +  L N+ G+ +   +
Sbjct: 145 IR------------LDLPILHEDFVSNNDEVEENNGHDVTATELDHFLTNSYGSVEFASE 204

Query: 212 MLQEVYEKATEEPLQNEQ-----------SDSLTIGGTME-----------GVANQEPNQ 269
             + + E+  +   +N+Q           S+S ++G  +            G   +E  +
Sbjct: 205 SSRSLTEEEQQRIERNKQLALERRQAKLLSNSQSLGNDLSVNTPSTQTSEAGSTGEEQKE 264

HSP 2 Score: 29.3 bits (64), Expect = 8.7e+01
Identity = 15/32 (46.88%), Postives = 20/32 (62.50%), Query Frame = 1


Query: 249 SSETSELTEEQRVRMEANRLKALERAAAKARS 281
           S  +  LTEE++ R+E N+  ALER  AK  S
Sbjct: 189 SESSRSLTEEEQQRIERNKQLALERRQAKLLS 220

[Close]

BLAST of Cucsa.132860 vs. Swiss-Prot
Match: TIPIN_MOUSE (TIMELESS-interacting protein OS=Mus musculus GN=Tipin PE=1 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 5.3e-12
Identity = 62/230 (26.96%), Postives = 95/230 (41.30%), Query Frame = 1


Query: 32  PNPNPTSNSSTPSFSSPPAAPSKAVEKPKK--APRTRPKLTPELLLSDDGLGYVLRHFPR 91
           P P P S    P+ + P       V  P K    R  PKL    L S+ GL   LRH   
Sbjct: 25  PFPPPASPERDPADAEPEEGSGSGVPVPPKRTVKRNLPKLDATRLTSERGLP-ALRHVFD 84

Query: 92  AFKYRGRGHEINDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRER 151
             K++G+GHE  DL+ LI     W   + P   FE F+ +VE +   K V+ CL  +R  
Sbjct: 85  KTKFKGKGHEAEDLKTLIRHMEHWAHRLFPKLQFEDFIDRVENLGNKKEVQTCLKRIR-- 144

Query: 152 VARGGDPTKWREAPILNDDDDDVNNE-KEAKDPD------DVF--DNQEEASLRNNGADD 211
                      + PI+++D  + N+E  EA  PD      D F   + +     +     
Sbjct: 145 ----------LDLPIVHEDFVNNNDEVGEANGPDVSATGFDPFLTSSSDSRKFASEPTRS 204

Query: 212 IEEDMLQEVYEKATEEPLQNEQSDSLTIGGTMEGVANQEPNQEPKTSNSS 251
           + E+  Q + E+  +  L+  Q+  L+   ++E     E N   +    S
Sbjct: 205 LTEEQQQRI-ERNKQLALERRQAKLLSNSQSLENDVTVEENSTGEDQEES 240

HSP 2 Score: 31.6 bits (70), Expect = 1.8e+01
Identity = 17/32 (53.12%), Postives = 20/32 (62.50%), Query Frame = 1


Query: 249 SSETSELTEEQRVRMEANRLKALERAAAKARS 281
           S  T  LTEEQ+ R+E N+  ALER  AK  S
Sbjct: 186 SEPTRSLTEEQQQRIERNKQLALERRQAKLLS 217

[Close]

BLAST of Cucsa.132860 vs. Swiss-Prot
Match: TIPIN_HUMAN (TIMELESS-interacting protein OS=Homo sapiens GN=TIPIN PE=1 SV=2)

HSP 1 Score: 70.5 bits (171), Expect = 3.4e-11
Identity = 54/192 (28.12%), Postives = 81/192 (42.19%), Query Frame = 1


Query: 28  PSSAPNPNPTSNSSTPSFSSPPAAPSKAVEKPKKAPRTRPKLTPELLLSDDGLGYVLRHF 87
           P  A         + P   S   AP +   K +   R  PKL  + L+S+ GL   LRH 
Sbjct: 27  PPPASPERQDGEGTEPDEESGNGAPVRVPPK-RTVKRNIPKLDAQRLISERGLP-ALRHV 86

Query: 88  PRAFKYRGRGHEINDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELR 147
               K++G+GHE  DL+ LI     W   + P   FE F+ +VE + + K V+ CL  +R
Sbjct: 87  FDKAKFKGKGHEAEDLKMLIRHMEHWAHRLFPKLQFEDFIDRVEYLGSKKEVQTCLKRIR 146

Query: 148 ERVARGGDPTKWREAPILNDDDDDVNNEKEAKDPDDVFDNQEEASLRNNGADDIEEDMLQ 207
                        + PIL++D    N+E    +  DV   + +  L N    ++      
Sbjct: 147 ------------LDLPILHEDFVSNNDEVAENNEHDVTSTELDPFLTNLSESEM---FAS 201

Query: 208 EVYEKATEEPLQ 220
           E+    TEE  Q
Sbjct: 207 ELSRSLTEEQQQ 201

HSP 2 Score: 29.3 bits (64), Expect = 8.7e+01
Identity = 16/32 (50.00%), Postives = 20/32 (62.50%), Query Frame = 1


Query: 249 SSETSELTEEQRVRMEANRLKALERAAAKARS 281
           S  +  LTEEQ+ R+E N+  ALER  AK  S
Sbjct: 189 SELSRSLTEEQQQRIERNKQLALERRQAKLLS 220

[Close]

BLAST of Cucsa.132860 vs. Swiss-Prot
Match: TIPIN_XENLA (TIMELESS-interacting protein OS=Xenopus laevis GN=tipin PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.2e-10
Identity = 64/233 (27.47%), Postives = 104/233 (44.64%), Query Frame = 1


Query: 50  AAPSKAVEKPKKAPRT----RPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLEN 109
           A  ++  E PK A R     +PKL  + L S  GL   LRH     K++G+GHE  DL+ 
Sbjct: 51  AGQTQREEAPKPARRVVKRPQPKLDGQRLASQRGLP-ALRHMFDDVKFKGKGHETEDLKI 110

Query: 110 LIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPIL 169
           L+     W   + P   FE F++++E +   K V+ CL ++R             + PI+
Sbjct: 111 LLRQMENWAHRLFPKLQFEDFLNRLESMGNKKEVQTCLKKIR------------MDLPIV 170

Query: 170 NDD----DDDVNNEKEAKD-PDDVFDNQEEASLRNNGADDIEEDMLQEVYEKATEEPLQN 229
           +DD    +  V  E  A D P + F   +E  + +           Q V    +EE LQ 
Sbjct: 171 HDDFLSEEVVVQTEDHAIDMPSEDFSFPDELHVPSPS---------QPVKVDLSEETLQR 230

Query: 230 -EQSDSLTIGGTMEGVANQEPNQEPKTSNSSETSELTEEQRVRMEANRLKALE 273
            E++  L +   ME +  Q  +Q    +  S+ +E+ ++     +A  L A+E
Sbjct: 231 IERNRRLALERRMEKMQAQAESQALSQATQSDPNEIPDD---AFDAEMLDAVE 258

[Close]

BLAST of Cucsa.132860 vs. TrEMBL
Match: A0A0A0LI96_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G009510 PE=4 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 6.9e-160
Identity = 280/284 (98.59%), Postives = 280/284 (98.59%), Query Frame = 1


Query: 1   MEKDNNAVPAPTGCFKCGKPGHWSRDCPSSAPNPNPTSNSSTPSFSSPPAAPSKAVEKPK 60
           MEKDNNAVPAPTGCFKCGKPGHWSRDCPSSAPNPNPTSNSSTPSFSSPPAAPSKAVEKPK
Sbjct: 1   MEKDNNAVPAPTGCFKCGKPGHWSRDCPSSAPNPNPTSNSSTPSFSSPPAAPSKAVEKPK 60

Query: 61  KAPRTRPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLYREWHSHILPY 120
           KAPRTRPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLYREWHSHILPY
Sbjct: 61  KAPRTRPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLYREWHSHILPY 120

Query: 121 YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDDVNNEKEAKD 180
           YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDDVNNEKEAKD
Sbjct: 121 YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDDVNNEKEAKD 180

Query: 181 PDDVFDNQEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTIGGTMEGVANQEP 240
           PDDVFDNQEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTIGGTMEGVA    
Sbjct: 181 PDDVFDNQEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTIGGTMEGVA---- 240

Query: 241 NQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLPTV 285
           NQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLPTV
Sbjct: 241 NQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLPTV 280

[Close]

BLAST of Cucsa.132860 vs. TrEMBL
Match: W9SKS8_9ROSA (TIMELESS-interacting protein OS=Morus notabilis GN=L484_014991 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.5e-85
Identity = 174/285 (61.05%), Postives = 209/285 (73.33%), Query Frame = 1


Query: 10  APTGCFKCGKPGHWSRDCPSSAPNPNP-----TSNSSTPSFSS----PPAAPSKAVEKPK 69
           APTGC+KCG+PGHWSRDCPSSAP PN      TS  STPS SS    P  A   + + PK
Sbjct: 7   APTGCYKCGRPGHWSRDCPSSAPIPNSNPNLNTSFRSTPSSSSFKSGPGTAEKSSAKPPK 66

Query: 70  KA--PRTRPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLYREWHSHIL 129
           K   PR RPKLTP+LLLSDDGLGYVLRHFPRAFKYRGRGHE++DL NLI +Y EWHS +L
Sbjct: 67  KVLPPRVRPKLTPQLLLSDDGLGYVLRHFPRAFKYRGRGHEVSDLGNLIRMYGEWHSRLL 126

Query: 130 PYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDDVNNEKEA 189
           PYYSF+ FVHKVEQVAATKRVK CL ELRERVA GGDPTK  E P+   +D++ ++ +EA
Sbjct: 127 PYYSFDQFVHKVEQVAATKRVKTCLRELRERVASGGDPTKLHEPPV---EDENPHDGQEA 186

Query: 190 KDPDDVFDNQEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTIGGTMEGVANQ 249
              ++V  ++E++S +N+  DDI+EDMLQ+VYE A E+P  N Q+            A +
Sbjct: 187 ISSEEVRHHKEDSSSKNHNIDDIQEDMLQDVYENAIEQPSANLQNGITP--------AKE 246

Query: 250 EPNQEP--KTSNSSETSELTEEQRVRMEANRLKALERAAAKARSL 282
            PNQ P  K S S E +++TEEQR RMEANRLKALE+AAA+ARSL
Sbjct: 247 LPNQVPNDKVSQSIE-NDITEEQRARMEANRLKALEKAAARARSL 279

[Close]

BLAST of Cucsa.132860 vs. TrEMBL
Match: B9HVL9_POPTR (Zinc knuckle family protein OS=Populus trichocarpa GN=POPTR_0010s10750g PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 5.2e-83
Identity = 169/301 (56.15%), Postives = 206/301 (68.44%), Query Frame = 1


Query: 1   MEKDNNAVPAPTGCFKCGKPGHWSRDCPSSAPNPNPTSNSSTPS---------------F 60
           MEK N    APTGC+KCG+PGHWSRDCP S PNPNP+SN ++P                F
Sbjct: 1   MEKTN---AAPTGCYKCGRPGHWSRDCPDSNPNPNPSSNPNSPRSFPSNNNSSSNNSNYF 60

Query: 61  SSPPAAPSKAVEKPKKAPRTRPKLTPELLLSDD-GLGYVLRHFPRAFKYRGRGHEINDLE 120
           S   + P+KA EKPKK PR+RPKLTPELLL +D GLG++LRHFPR FKYRGRGHE++DL 
Sbjct: 61  SGSNSKPAKAAEKPKKVPRSRPKLTPELLLGEDNGLGFILRHFPRNFKYRGRGHEVSDLG 120

Query: 121 NLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPI 180
           NLIGLY EWHSH+LPYYSF+ FVHKVEQVAATKR KMC+ ELRERVA GGDPTK RE+  
Sbjct: 121 NLIGLYSEWHSHLLPYYSFDQFVHKVEQVAATKRAKMCVRELRERVASGGDPTKLRES-- 180

Query: 181 LNDDDDDVNNEKEAKDPD-----DVFDNQEEASLRNNGADDIEEDMLQEVYEKATEEPLQ 240
              +    N E +   PD     +V  N+E+   +N   D + EDML EVY++ATEEP Q
Sbjct: 181 -LTEHVSANVEHDLSTPDEGLNSEVTHNEEDPLSKNQDVDGLPEDMLHEVYDRATEEPTQ 240

Query: 241 NEQSDSLTIGGTMEGVANQEPNQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKAR 281
                      T++    + PN+    S S+E S ++EEQ+ RMEANRL+ALERAAA+A+
Sbjct: 241 -----------TLDRRDMELPNEINGASCSNEVS-ISEEQKARMEANRLRALERAAARAQ 283

[Close]

BLAST of Cucsa.132860 vs. TrEMBL
Match: I1LIR6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G099800 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 3.4e-82
Identity = 159/271 (58.67%), Postives = 193/271 (71.22%), Query Frame = 1


Query: 12  TGCFKCGKPGHWSRDCPSSAPNPNPTSNSST---PSFSSPPAAPSK---AVEKPKKAPRT 71
           TGC+KCGKPGHWSRDCP SAPNPNP SN++T   P+  +P ++  K   A EKPKK PRT
Sbjct: 21  TGCYKCGKPGHWSRDCPFSAPNPNPNSNTATTPNPNTPNPSSSSFKSRSATEKPKKLPRT 80

Query: 72  RPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLYREWHSHILPYYSFEH 131
           +PKLTPELLLSDDGLGYVLR+FPR FKYRGRGHE+ DL NL+ LY EWHS +LPYYSF  
Sbjct: 81  KPKLTPELLLSDDGLGYVLRYFPREFKYRGRGHEVRDLGNLLRLYTEWHSRLLPYYSFNQ 140

Query: 132 FVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDDVNNEKEAKDPDDVF 191
           FVHKVE+VAAT+RVK CL ELRERVA GGDPTK RE P+++D   D +    + +     
Sbjct: 141 FVHKVEKVAATRRVKTCLRELRERVASGGDPTKLREPPVVHDIPSDEHGFSVSAEDGGAT 200

Query: 192 DNQEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTIGGTMEGVAN-QEPNQEP 251
             + +        +DI+EDML ++Y+KATEEP Q+  +    IG +M   +N  E   E 
Sbjct: 201 HQEADLFAEFENVNDIQEDMLNDIYDKATEEPSQSMHN---VIGTSMASESNATEKTSEE 260

Query: 252 KTSNSSETSELTEEQRVRMEANRLKALERAA 276
             S+ S  +E+TEEQR RMEANRLKALER A
Sbjct: 261 NGSSQSGKAEITEEQRARMEANRLKALERRA 288

[Close]

BLAST of Cucsa.132860 vs. TrEMBL
Match: D7TAF5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g01670 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 9.8e-82
Identity = 162/283 (57.24%), Postives = 198/283 (69.96%), Query Frame = 1


Query: 10  APTGCFKCGKPGHWSRDCPSSA------PNPNPTSNSSTPSFSSPPAAP--SKAVEKPKK 69
           APTGC+KCG+PGHWSRDCPSS       PNPNP S +   SF+   A+   +K+ EKPKK
Sbjct: 7   APTGCYKCGRPGHWSRDCPSSNTNPNPNPNPNPNSQNQYSSFNKGTASKPLAKSSEKPKK 66

Query: 70  APRTRPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLYREWHSHILPYY 129
           APRTRP LTPELLLSD+GLGYVLRHFP AFK+RGRGHE++DL NLIGLY EWHSH+LPYY
Sbjct: 67  APRTRPNLTPELLLSDNGLGYVLRHFPGAFKFRGRGHEVSDLGNLIGLYSEWHSHLLPYY 126

Query: 130 SFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDD----DDDVNNEKE 189
           SF+ FVHKVE+V  TKRVK+C+ ELRERV  GGD TK+ E P+ ++D    D  +   +E
Sbjct: 127 SFDQFVHKVEKVGTTKRVKICIRELRERVENGGDLTKFHEPPVEHEDCPNHDQGLPATEE 186

Query: 190 AKDPDDVFDNQEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTIGGTMEGVAN 249
             +  D    Q + SL +   +D++EDML EVY  ATEEP Q   SD +      EG + 
Sbjct: 187 VMNSVDPSHYQGDTSLNH---EDVQEDMLHEVYRSATEEPSQTLASDMVAGDVPSEGSSK 246

Query: 250 QE-PNQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKAR 280
           +E PNQ P+        ++TEEQ+ RMEANR KALERAAA+ R
Sbjct: 247 KELPNQVPENGPIRSDIQITEEQKARMEANRQKALERAAARVR 286

[Close]

BLAST of Cucsa.132860 vs. TAIR10
Match: AT3G02820.1 (AT3G02820.1 zinc knuckle (CCHC-type) family protein)

HSP 1 Score: 259.6 bits (662), Expect = 2.2e-69
Identity = 143/280 (51.07%), Postives = 184/280 (65.71%), Query Frame = 1


Query: 10  APTGCFKCGKPGHWSRDCPSSAP--NPNPTSNSSTPS------FSSPPAAPSKAVEKPKK 69
           APTGCFKCG+PGHWSRDCPSSAP    N  S+SS PS      F    +    ++    K
Sbjct: 4   APTGCFKCGRPGHWSRDCPSSAPVAGNNSVSSSSAPSQIPNNEFQRSSSKSGTSIAPAPK 63

Query: 70  APRTR---PKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLYREWHSHIL 129
             +TR   PKLTPELLLS+DGLGYVLR+FP++FKYRGRG E++DL NLI LY EWH+H+L
Sbjct: 64  VTKTRVQRPKLTPELLLSEDGLGYVLRYFPKSFKYRGRGKEVSDLGNLIRLYSEWHTHLL 123

Query: 130 PYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILND-DDDDVNNEKE 189
           PYYSF+HFVHKV+QVA+TKRVK C+ ELRERVA G DP K  E    N    DD + ++ 
Sbjct: 124 PYYSFDHFVHKVQQVASTKRVKNCINELRERVASGVDPNKLYEKQEENTVPSDDQDMDQP 183

Query: 190 AKDPDDVFDNQEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTIGGTMEGVAN 249
           + D +++     +A   +  AD  E+ ML E+++ A++ P  +EQ+   +   T E  A 
Sbjct: 184 SHDEENIPSKSVDA---DTNADAFEDSMLNEIFDNASKLP-SDEQNMDKSSELTEEQRAR 243

Query: 250 QEPNQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAK 278
            E N   +     +   ++EEQRVRMEANRLKALERA A+
Sbjct: 244 MEAN---RLKAMEKAQNISEEQRVRMEANRLKALERAKAR 276

[Close]

BLAST of Cucsa.132860 vs. NCBI nr
Match: gi|449443255|ref|XP_004139395.1| (PREDICTED: TIMELESS-interacting protein [Cucumis sativus])

HSP 1 Score: 571.2 bits (1471), Expect = 9.9e-160
Identity = 280/284 (98.59%), Postives = 280/284 (98.59%), Query Frame = 1


Query: 1   MEKDNNAVPAPTGCFKCGKPGHWSRDCPSSAPNPNPTSNSSTPSFSSPPAAPSKAVEKPK 60
           MEKDNNAVPAPTGCFKCGKPGHWSRDCPSSAPNPNPTSNSSTPSFSSPPAAPSKAVEKPK
Sbjct: 1   MEKDNNAVPAPTGCFKCGKPGHWSRDCPSSAPNPNPTSNSSTPSFSSPPAAPSKAVEKPK 60

Query: 61  KAPRTRPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLYREWHSHILPY 120
           KAPRTRPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLYREWHSHILPY
Sbjct: 61  KAPRTRPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLYREWHSHILPY 120

Query: 121 YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDDVNNEKEAKD 180
           YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDDVNNEKEAKD
Sbjct: 121 YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDDVNNEKEAKD 180

Query: 181 PDDVFDNQEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTIGGTMEGVANQEP 240
           PDDVFDNQEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTIGGTMEGVA    
Sbjct: 181 PDDVFDNQEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTIGGTMEGVA---- 240

Query: 241 NQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLPTV 285
           NQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLPTV
Sbjct: 241 NQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLPTV 280

[Close]

BLAST of Cucsa.132860 vs. NCBI nr
Match: gi|659070757|ref|XP_008456510.1| (PREDICTED: TIMELESS-interacting protein [Cucumis melo])

HSP 1 Score: 550.8 bits (1418), Expect = 1.4e-153
Identity = 269/284 (94.72%), Postives = 275/284 (96.83%), Query Frame = 1


Query: 1   MEKDNNAVPAPTGCFKCGKPGHWSRDCPSSAPNPNPTSNSSTPSFSSPPAAPSKAVEKPK 60
           M+KDNNA+ APTGC+KCGKPGHWSRDCPSSAPNPNPTSNSS P FSS PAAPSKAVEKPK
Sbjct: 1   MDKDNNAIAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSKPPFSSAPAAPSKAVEKPK 60

Query: 61  KAPRTRPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLYREWHSHILPY 120
           KAPRTRPKLTPELLLS+DGLGYVLRHFPRAFKYRGRGHEI+DLENLIGLYREWHSHILPY
Sbjct: 61  KAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPY 120

Query: 121 YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDDVNNEKEAKD 180
           YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILN DDDDVNNEKEAKD
Sbjct: 121 YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILN-DDDDVNNEKEAKD 180

Query: 181 PDDVFDNQEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTIGGTMEGVANQEP 240
           P+ VFDN EEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLT GGTMEGVANQEP
Sbjct: 181 PEGVFDNPEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTTGGTMEGVANQEP 240

Query: 241 NQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLPTV 285
           NQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSL TV
Sbjct: 241 NQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLATV 283

[Close]

BLAST of Cucsa.132860 vs. NCBI nr
Match: gi|703159670|ref|XP_010112308.1| (TIMELESS-interacting protein [Morus notabilis])

HSP 1 Score: 324.3 bits (830), Expect = 2.1e-85
Identity = 174/285 (61.05%), Postives = 209/285 (73.33%), Query Frame = 1


Query: 10  APTGCFKCGKPGHWSRDCPSSAPNPNP-----TSNSSTPSFSS----PPAAPSKAVEKPK 69
           APTGC+KCG+PGHWSRDCPSSAP PN      TS  STPS SS    P  A   + + PK
Sbjct: 7   APTGCYKCGRPGHWSRDCPSSAPIPNSNPNLNTSFRSTPSSSSFKSGPGTAEKSSAKPPK 66

Query: 70  KA--PRTRPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLYREWHSHIL 129
           K   PR RPKLTP+LLLSDDGLGYVLRHFPRAFKYRGRGHE++DL NLI +Y EWHS +L
Sbjct: 67  KVLPPRVRPKLTPQLLLSDDGLGYVLRHFPRAFKYRGRGHEVSDLGNLIRMYGEWHSRLL 126

Query: 130 PYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDDVNNEKEA 189
           PYYSF+ FVHKVEQVAATKRVK CL ELRERVA GGDPTK  E P+   +D++ ++ +EA
Sbjct: 127 PYYSFDQFVHKVEQVAATKRVKTCLRELRERVASGGDPTKLHEPPV---EDENPHDGQEA 186

Query: 190 KDPDDVFDNQEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTIGGTMEGVANQ 249
              ++V  ++E++S +N+  DDI+EDMLQ+VYE A E+P  N Q+            A +
Sbjct: 187 ISSEEVRHHKEDSSSKNHNIDDIQEDMLQDVYENAIEQPSANLQNGITP--------AKE 246

Query: 250 EPNQEP--KTSNSSETSELTEEQRVRMEANRLKALERAAAKARSL 282
            PNQ P  K S S E +++TEEQR RMEANRLKALE+AAA+ARSL
Sbjct: 247 LPNQVPNDKVSQSIE-NDITEEQRARMEANRLKALEKAAARARSL 279

[Close]

BLAST of Cucsa.132860 vs. NCBI nr
Match: gi|224111344|ref|XP_002315820.1| (zinc knuckle family protein [Populus trichocarpa])

HSP 1 Score: 315.8 bits (808), Expect = 7.5e-83
Identity = 169/301 (56.15%), Postives = 206/301 (68.44%), Query Frame = 1


Query: 1   MEKDNNAVPAPTGCFKCGKPGHWSRDCPSSAPNPNPTSNSSTPS---------------F 60
           MEK N    APTGC+KCG+PGHWSRDCP S PNPNP+SN ++P                F
Sbjct: 1   MEKTN---AAPTGCYKCGRPGHWSRDCPDSNPNPNPSSNPNSPRSFPSNNNSSSNNSNYF 60

Query: 61  SSPPAAPSKAVEKPKKAPRTRPKLTPELLLSDD-GLGYVLRHFPRAFKYRGRGHEINDLE 120
           S   + P+KA EKPKK PR+RPKLTPELLL +D GLG++LRHFPR FKYRGRGHE++DL 
Sbjct: 61  SGSNSKPAKAAEKPKKVPRSRPKLTPELLLGEDNGLGFILRHFPRNFKYRGRGHEVSDLG 120

Query: 121 NLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPI 180
           NLIGLY EWHSH+LPYYSF+ FVHKVEQVAATKR KMC+ ELRERVA GGDPTK RE+  
Sbjct: 121 NLIGLYSEWHSHLLPYYSFDQFVHKVEQVAATKRAKMCVRELRERVASGGDPTKLRES-- 180

Query: 181 LNDDDDDVNNEKEAKDPD-----DVFDNQEEASLRNNGADDIEEDMLQEVYEKATEEPLQ 240
              +    N E +   PD     +V  N+E+   +N   D + EDML EVY++ATEEP Q
Sbjct: 181 -LTEHVSANVEHDLSTPDEGLNSEVTHNEEDPLSKNQDVDGLPEDMLHEVYDRATEEPTQ 240

Query: 241 NEQSDSLTIGGTMEGVANQEPNQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKAR 281
                      T++    + PN+    S S+E S ++EEQ+ RMEANRL+ALERAAA+A+
Sbjct: 241 -----------TLDRRDMELPNEINGASCSNEVS-ISEEQKARMEANRLRALERAAARAQ 283

[Close]

BLAST of Cucsa.132860 vs. NCBI nr
Match: gi|955349950|ref|XP_014619424.1| (PREDICTED: TIMELESS-interacting protein isoform X4 [Glycine max])

HSP 1 Score: 315.1 bits (806), Expect = 1.3e-82
Identity = 160/276 (57.97%), Postives = 197/276 (71.38%), Query Frame = 1


Query: 12  TGCFKCGKPGHWSRDCPSSAPNPNPTSNSST---PSFSSPPAAPSK---AVEKPKKAPRT 71
           TGC+KCGKPGHWSRDCP SAPNPNP SN++T   P+  +P ++  K   A EKPKK PRT
Sbjct: 21  TGCYKCGKPGHWSRDCPFSAPNPNPNSNTATTPNPNTPNPSSSSFKSRSATEKPKKLPRT 80

Query: 72  RPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLYREWHSHILPYYSFEH 131
           +PKLTPELLLSDDGLGYVLR+FPR FKYRGRGHE+ DL NL+ LY EWHS +LPYYSF  
Sbjct: 81  KPKLTPELLLSDDGLGYVLRYFPREFKYRGRGHEVRDLGNLLRLYTEWHSRLLPYYSFNQ 140

Query: 132 FVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDDVNNEKEAKDPDDVF 191
           FVHKVE+VAAT+RVK CL ELRERVA GGDPTK RE P+++D   D +    + +     
Sbjct: 141 FVHKVEKVAATRRVKTCLRELRERVASGGDPTKLREPPVVHDIPSDEHGFSVSAEDGGAT 200

Query: 192 DNQEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTIGGTMEGVAN-QEPNQEP 251
             + +        +DI+EDML ++Y+KATEEP Q+  +    IG +M   +N  E   E 
Sbjct: 201 HQEADLFAEFENVNDIQEDMLNDIYDKATEEPSQSMHN---VIGTSMASESNATEKTSEE 260

Query: 252 KTSNSSETSELTEEQRVRMEANRLKALERAAAKARS 281
             S+ S  +E+TEEQR RMEANRLKALER AA +++
Sbjct: 261 NGSSQSGKAEITEEQRARMEANRLKALERRAALSQA 293

The following BLAST results are available for this feature:

BLAST of Cucsa.132860 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TIPIN_RAT	3.1e-12	27.88	TIMELESS-interacting protein OS=Rattus norvegicus GN=Tipin PE=2 SV=1	[more]
TIPIN_BOVIN	4.0e-12	25.00	TIMELESS-interacting protein OS=Bos taurus GN=TIPIN PE=2 SV=1	[more]
TIPIN_MOUSE	5.3e-12	26.96	TIMELESS-interacting protein OS=Mus musculus GN=Tipin PE=1 SV=2	[more]
TIPIN_HUMAN	3.4e-11	28.13	TIMELESS-interacting protein OS=Homo sapiens GN=TIPIN PE=1 SV=2	[more]
TIPIN_XENLA	2.2e-10	27.47	TIMELESS-interacting protein OS=Xenopus laevis GN=tipin PE=1 SV=1	[more]

BLAST of Cucsa.132860 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LI96_CUCSA	6.9e-160	98.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G009510 PE=4 SV=1	[more]
W9SKS8_9ROSA	1.5e-85	61.05	TIMELESS-interacting protein OS=Morus notabilis GN=L484_014991 PE=4 SV=1	[more]
B9HVL9_POPTR	5.2e-83	56.15	Zinc knuckle family protein OS=Populus trichocarpa GN=POPTR_0010s10750g PE=4 SV=...	[more]
I1LIR6_SOYBN	3.4e-82	58.67	Uncharacterized protein OS=Glycine max GN=GLYMA_11G099800 PE=4 SV=1	[more]
D7TAF5_VITVI	9.8e-82	57.24	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g01670 PE=4 SV=...	[more]

BLAST of Cucsa.132860 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G02820.1	2.2e-69	51.07	zinc knuckle (CCHC-type) family protein	[more]

BLAST of Cucsa.132860 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443255\|ref\|XP_004139395.1\|	9.9e-160	98.59	PREDICTED: TIMELESS-interacting protein [Cucumis sativus]	[more]
gi\|659070757\|ref\|XP_008456510.1\|	1.4e-153	94.72	PREDICTED: TIMELESS-interacting protein [Cucumis melo]	[more]
gi\|703159670\|ref\|XP_010112308.1\|	2.1e-85	61.05	TIMELESS-interacting protein [Morus notabilis]	[more]
gi\|224111344\|ref\|XP_002315820.1\|	7.5e-83	56.15	zinc knuckle family protein [Populus trichocarpa]	[more]
gi\|955349950\|ref\|XP_014619424.1\|	1.3e-82	57.97	PREDICTED: TIMELESS-interacting protein isoform X4 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001878	Znf_CCHC
IPR012923	Csm3

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0008270	zinc ion binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006974	cellular response to DNA damage stimulus
GO:0007049	cell cycle
GO:0048478	replication fork protection

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007049	cell cycle
biological_process	GO:0006974	cellular response to DNA damage stimulus
biological_process	GO:0048478	replication fork protection
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.132860.1	Cucsa.132860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	GENE3D	G3DSA:4.10.60.10		coord: 11..29 score: 3.
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 13..29 score: 2.
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 13..29 score: 9.
IPR001878	Zinc finger, CCHC-type	PROFILE	PS50158	ZF_CCHC	coord: 14..29 score:
IPR001878	Zinc finger, CCHC-type	unknown	SSF57756	Retrovirus zinc finger-like domains	coord: 7..33 score: 6.
IPR012923	Chromosome segregation in meiosis protein 3	PRODOM	PD089639		coord: 66..151 score: 9.0
IPR012923	Chromosome segregation in meiosis protein 3	PFAM	PF07962	Swi3	coord: 68..149 score: 4.4
None	No IPR available	PANTHER	PTHR13220	TIMELESS INTERACTING-RELATED	coord: 7..280 score: 1.7
None	No IPR available	PANTHER	PTHR13220:SF11	TIMELESS-INTERACTING PROTEIN	coord: 7..280 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.132860	Cla013615	Watermelon (97103) v1	cgywmB223
Cucsa.132860	Csa2G009510	Cucumber (Chinese Long) v2	cgycuB184
Cucsa.132860	MELO3C004425	Melon (DHL92) v3.5.1	cgymeB216
Cucsa.132860	ClCG02G017080	Watermelon (Charleston Gray)	cgywcgB218
Cucsa.132860	CSPI02G02530	Wild cucumber (PI 183967)	cgycpiB187
Cucsa.132860	CmaCh05G012330	Cucurbita maxima (Rimu)	cgycmaB0365
Cucsa.132860	CmoCh05G012590	Cucurbita moschata (Rifu)	cgycmoB0362
Cucsa.132860	Lsi11G004040	Bottle gourd (USVL1VR-Ls)	cgylsiB205
Cucsa.132860	Cp4.1LG11g10150	Cucurbita pepo (Zucchini)	cgycpeB0351
Cucsa.132860	MELO3C004425.2	Melon (DHL92) v3.6.1	cgymedB213
Cucsa.132860	CsaV3_2G003690	Cucumber (Chinese Long) v3	cgycucB190
Cucsa.132860	Cla97C02G042780	Watermelon (97103) v2	cgywmbB213
Cucsa.132860	Bhi06G001544	Wax gourd	cgywgoB250
Cucsa.132860	Carg23009	Silver-seed gourd	carcgyB1188

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.132860	Cucurbita pepo (Zucchini)	cgycpeB0355
Cucsa.132860	Cucurbita pepo (Zucchini)	cgycpeB0356
Cucsa.132860	Silver-seed gourd	carcgyB0300
Cucsa.132860	Silver-seed gourd	carcgyB0883
Cucsa.132860	Wax gourd	cgywgoB251
Cucsa.132860	Cucurbita maxima (Rimu)	cgycmaB0364
Cucsa.132860	Cucurbita moschata (Rifu)	cgycmoB0359