Cla013615 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla013615
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	TIMELESS-interacting protein (AHRD V1 *--- TIPIN_MOUSE); contains Interpro domain(s) IPR012923 Replication fork protection component Swi3
Location	Chr2 : 27459168 .. 27463266 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGGACAACGCCGCCGTCGCAGCGCCGACGGGATGCTACAAGTGTGGGAAGCCGGGCCACTGGTCTCGTGATTGCCCTTCCTCCGCTCCAAATCCCAATCCCAATCCCAATCCCAATCCCACTTCCAATTCTTCCACACCTCCTTTCTCCTCTGCTCCTGCTGCCCCTTCAAAAATCGCAGAGAAGCCCAAGAAACCCCCCAGAACCAGGCCTAAGCTCACTCCTGACCTACTCCTTTCCGAGGATGGTCTTGGTTACGTCCTTCGCCATTTCCCTCGCGCCTTCAAGTATCGCGGCCGTGGACATGAGGTTATCTTCTATTTTCCTTCCGATTATTATGTAAATACTCGATTTGTTCTCATATGCTATATATGAGTTTTATTTGAGATATATTTCAACATTGCTGCTCAAGGTCGAAGAAGGTTTTCGAAAAGAAAATACTAATTACTAGAGCCTGGCGCGTTTTAGGGTTTAGGTTTTTGTGTTGTTGTATGATTAGAAACAATTTGGAATGTAAATAAAGATTTGCTTTGGAGAATTGTATGAGAGAGCTCAGGTTCATCGGCGGCAATCGGGATTTACCTTAATGGCTTGTTTAATGGGTGCTACTTTTGGAACACAAGATTGCTAATCTTTTTCCATTGAATTATAGCTAAATGCACTTCATCAACACCGTATATGTATGTCGTTTCTTTTTTCTTATTACCGTTTCATCCTCTCATCTATTCTCATTTTCTAATGATTTGATTATTGTACTGATTGAGTTATATTTTTTATTGTTGTTTTGTAGATCAGCGATTTGGAAAACCTTATTGGCTTATACAGGGAATGGCATTCTCATATACTCCCTTATTACTCTTTTGAGCATTTTGTACATAAGGTGGAACAAGTAGCTGCTACGAAACGTGTAAAGGTAAAAATGTGCACGAACCCTGAATTTATATGCTCTTTTATTATGAAAGTGGTGTCCATATATGGCTTGCTGGATTGGTATGTGTCTAAGTACAGAAATTTATCCTAATAACATACTAATGTAGATAGAAATTTTGGCCTAAAGGAACTGCACTTAAGAAACCCAGTGCATCTGAAGGGAGAACACACAGAAACTGCATTATATTGTGTTGGCATGCTGAACGCACTCTAACTCTGTAATATTTTAAGTGAATCATTGTTTATCGAATCAAATCAACATGGAGTAAACTTGTTTATTAAATGATATCTAATTTACAATGAATTGGGATTCTTTCTAAAAAGACATGTTTTGAGCAGATGTGTCTTGGAGAACTAAGAGAGAGAGTTGCCAGGGGAGGGGATCCTACAAAGTGGCGTGAGGCACCAATTCTAAATGATGATGATGTCAATAATGAAAAAGGTACCTTCTAGTATTCTCATTTATTAAAAGACACTCATATAATTATTTTCCTTAGCTGTTTGGTAAGTTGTACATTGTCCTCGAACTCTATTTAAAAAGATTTAATTTGGTTTAGATGATGAATTTAAAGTCAACTGAACTGAAAAAGAAAATAAAATATTGAAATTGAACACGATGATTAGTTTATTGTCGTTCCATTATGATTTCTAAAAGTTTTTTGTAATTTCTCCAAAAGTAGCCATGTCCATCTCTGAGAATTTTAGGTATTAAGAAGATCAATATCTAAAAACATTGAACAGCGCAAATGAAAGATGATTGTACTATCGTTGTTTTCTATGTTCCACTCCCACCAAGACAGAATTCTATGAAAACTTCCAAATACTGCTCATTCAAATTGTCGTCTTCAGCGTTGGAAGAACAATGTTTGACTAGGGCTCAGTTTACCCGAGTGTATTAATGGGCTGGTTGGGATCAGTAAGCTTAACTTTTTCTCCAATGATGGAAAACACTGTCTAGTGAGGAGTTGTAGGTGGCTTTTGTTTGTCATTAGCCATTACTCTTACATTCAGCTTCCATCAATATGTTGCCTCCATCACCTTCTTGGGCATTGGTATCCGAGTCTTTTTGTCATTGAGTCACGTTTTACTGGACTGGAGCTCCTTCTTATGGTTGGCTCTCCTTTTTGTGGGCTTCTTGTTTTTGTTTGCCTATGTATTCTTTCATTTCTTCTCAACAAAAGTTATGTGTTTTAATTAAAAATGTTCTGGATCCCACCTTGGAAAAGTGGAGAGAACTCACAATTTTAAAAGATACATGAGTTTCTCGGTTATTGACAATTGGTTTTAAGATGAAATTCCATGTAAAAAAATATTAACTCATCATCTTTCTTTCTCTTACACATATTCGTACGCTTAGGGTTTTTGATAACAATGTACACCTTTGCCAATTGGAGCTCAGTTCTAAATATCATCCAACTCTTTGGCATCTGAATGCCCACTTTGGTAGGCACTACGCAGTTGGTGCTTGGGATAAAATGTAGGCTGTAATTATGTTGCCTTTTTCATTTTCTTTGCACTTTGCACGGCATGGTATGTTTCTTGGCTCTGTGTAGTTAGAAATGCAACCTAGAAAGTTAAATCCTTCTATTTGAGTATTTTCTCTCATGTTTGGAACTATACTCTGATATGATGTTTGGAAAATATTTTTAGATTCTAAAACTAATCATTGTTTGAGTAACCCTTTTCTTGAACTTTAATTCTGTCTGCCAATGCTTGCAGAAGCCAAAGACCCGGAAGGCGTATTTGATGATCTGGAAGAGGCTTCTTTGAGAAATAATTGTGCTGATGACATTGAAGAGGACATGCTTCAGGAAGTTTATGAGAAAGCTACGGAAGTAAGTCTTTCTCTGTTCACCTTTTTTTTGAACACTTGGTTGCTTTCCATCCCTACTATATGTTTTAGCTTTAACGTACCATTTCTTACTGAGAAAAATCTCGCAGTTATTGAATTGAATTAGGAAATTTTACCATGAGTCGTACATTAGATTTCAGGAATAGTCATAATGAAGCAAACTGTGTTTTCAGTCCTTCATTTGGCAGATCAATTTTCCAGATGAAGGTGTCGGTCGATTATTGAAAATCCATATGTCAATGCCCCAATTAACTATAATTTGCACTTAAACTTATTTTATCAGGGGAGCACTTTCTAATTATTGCACAAGTTCATGCATCTTCATATTTGATCAAAGAGTTTTCACCTAATGACAGCAAAAGAAAATGCTGAGTAACTGCCCATACAGTAGAAGATGAAGGTCTATCATTTCCCTTTTTAGGGACAAATCAATTTATATCCCTAAGCTTTGGATATTGTACTTTAGAAACTCCAAACTAATAACTATGTCGGTTTAAACTCAAAACTTTCCAAATTAATTTAGATGAATTGTTAGTGATTTATATCAACTTGCACTTAGTTCCACTTAAAATCAGCTAAAAATTACATAAATATAATTAGTCTTCTCTCATCCCACCGAAAGTGCAAGAAAAATTGTTACATGATTCTTTCTAAGTAAAGAAAAATAGAGTGAGACGAGAAGATGAATTATCAGTCAGAGATATGGAAAAAACACTACCATCTATTTCATTACTGCATTTCTCATTTATATTTGTTCTTGTATATGGAGAAGTTTCATATACATGTGAAAGCTATGAAGTTCAATACATGTATGAAGAAGTTTTATACACGGACGAAAGTTATGCGTTAAACTGTTTTTACCTAACTATGATAAAAAGTAAGCTTAGGTCAAAACCCTTATCTGTATACTAATGTGTATAGATCGAACCTTCCACTTGATGAGAAACTTGAAGAAAGCAGACCTCCATCCTTATTCTCTTTAACTTGAGTTTTGGTACCTAACACCATTTCATGACATATTAACGATCTACAACACTTGATTACGTTATACGGGTTTTATTTACATGATTGTAGGACTATAACTCATTTGGTGAACTAAGAAGCAAATTTACATGATTGTAGAAACCACTGCAAAATTTACAAAGTGATTCCTTCACCAATGGTGAAACTATGGTGGCCAACCAAGAACCAAACACTAGCAATTCAAGTGAAACTCAACTCACGGAGGAACAGAGAGGTCGAATGGAAGCAAACAGGTTGAAGGCATTAGAAAGAGCTGCAGCCAAGGCCCGCTCGTTGCCCACTGTCTGA

mRNA sequence

ATGGAGAAGGACAACGCCGCCGTCGCAGCGCCGACGGGATGCTACAAGTGTGGGAAGCCGGGCCACTGGTCTCGTGATTGCCCTTCCTCCGCTCCAAATCCCAATCCCAATCCCAATCCCAATCCCACTTCCAATTCTTCCACACCTCCTTTCTCCTCTGCTCCTGCTGCCCCTTCAAAAATCGCAGAGAAGCCCAAGAAACCCCCCAGAACCAGGCCTAAGCTCACTCCTGACCTACTCCTTTCCGAGGATGGTCTTGGTTACGTCCTTCGCCATTTCCCTCGCGCCTTCAAGTATCGCGGCCGTGGACATGAGATCAGCGATTTGGAAAACCTTATTGGCTTATACAGGGAATGGCATTCTCATATACTCCCTTATTACTCTTTTGAGCATTTTGTACATAAGGTGGAACAAGTAGCTGCTACGAAACGTGTAAAGATGTGTCTTGGAGAACTAAGAGAGAGAGTTGCCAGGGGAGGGGATCCTACAAAGTGGCGTGAGGCACCAATTCTAAATGATGATGATGTCAATAATGAAAAAGAAGCCAAAGACCCGGAAGGCGTATTTGATGATCTGGAAGAGGCTTCTTTGAGAAATAATTGTGCTGATGACATTGAAGAGGACATGCTTCAGGAAGTTTATGAGAAAGCTACGGAAAAACCACTGCAAAATTTACAAAGTGATTCCTTCACCAATGGTGAAACTATGGTGGCCAACCAAGAACCAAACACTAGCAATTCAAGTGAAACTCAACTCACGGAGGAACAGAGAGGTCGAATGGAAGCAAACAGGTTGAAGGCATTAGAAAGAGCTGCAGCCAAGGCCCGCTCGTTGCCCACTGTCTGA

Coding sequence (CDS)

ATGGAGAAGGACAACGCCGCCGTCGCAGCGCCGACGGGATGCTACAAGTGTGGGAAGCCGGGCCACTGGTCTCGTGATTGCCCTTCCTCCGCTCCAAATCCCAATCCCAATCCCAATCCCAATCCCACTTCCAATTCTTCCACACCTCCTTTCTCCTCTGCTCCTGCTGCCCCTTCAAAAATCGCAGAGAAGCCCAAGAAACCCCCCAGAACCAGGCCTAAGCTCACTCCTGACCTACTCCTTTCCGAGGATGGTCTTGGTTACGTCCTTCGCCATTTCCCTCGCGCCTTCAAGTATCGCGGCCGTGGACATGAGATCAGCGATTTGGAAAACCTTATTGGCTTATACAGGGAATGGCATTCTCATATACTCCCTTATTACTCTTTTGAGCATTTTGTACATAAGGTGGAACAAGTAGCTGCTACGAAACGTGTAAAGATGTGTCTTGGAGAACTAAGAGAGAGAGTTGCCAGGGGAGGGGATCCTACAAAGTGGCGTGAGGCACCAATTCTAAATGATGATGATGTCAATAATGAAAAAGAAGCCAAAGACCCGGAAGGCGTATTTGATGATCTGGAAGAGGCTTCTTTGAGAAATAATTGTGCTGATGACATTGAAGAGGACATGCTTCAGGAAGTTTATGAGAAAGCTACGGAAAAACCACTGCAAAATTTACAAAGTGATTCCTTCACCAATGGTGAAACTATGGTGGCCAACCAAGAACCAAACACTAGCAATTCAAGTGAAACTCAACTCACGGAGGAACAGAGAGGTCGAATGGAAGCAAACAGGTTGAAGGCATTAGAAAGAGCTGCAGCCAAGGCCCGCTCGTTGCCCACTGTCTGA

Protein sequence

MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPNPNPNPTSNSSTPPFSSAPAAPSKIAEKPKKPPRTRPKLTPDLLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDVNNEKEAKDPEGVFDDLEEASLRNNCADDIEEDMLQEVYEKATEKPLQNLQSDSFTNGETMVANQEPNTSNSSETQLTEEQRGRMEANRLKALERAAAKARSLPTV

Homology

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BLAST of Cla013615 vs. Swiss-Prot
Match: TIPIN_BOVIN (TIMELESS-interacting protein OS=Bos taurus GN=TIPIN PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.1e-14
Identity = 66/240 (27.50%), Postives = 99/240 (41.25%), Query Frame = 1


Query: 32  PNPNPNPNPNPTSNSSTPPFSSAPAAPSKIAEKPKKPPRTRPKLTPDLLLSEDGLGYVLR 91
           P P P          + P   S   AP  +  K +   R  PKL  + L+SE GL   LR
Sbjct: 25  PFPPPASPGREDGEGAEPEEESGRGAPVPVPPK-RTVKRNIPKLNAERLISERGLP-ALR 84

Query: 92  HFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGE 151
           H     K++G+GHE  DL+ LI     W   + P   FE F+ +VE +   K V+ CL  
Sbjct: 85  HVFEKAKFKGKGHEAEDLKTLIRHMEHWAHRLFPKLQFEDFIDRVECLGNKKEVQTCLKR 144

Query: 152 LRERVARGGDPTKWREAPILNDDDVNNEKEAKDPEG--------------VFDDLEEASL 211
           +R             + PIL++D V+N  E ++  G               +  +E AS 
Sbjct: 145 IR------------LDLPILHEDFVSNNDEVEENNGHDVTATELDHFLTNSYGSVEFASE 204

Query: 212 RNNCADDIEEDMLQEVYEKATEKPLQNLQSDSFTNGETMVANQEPNTSNSSETQLTEEQR 258
            +    + E+  ++   + A E+    L S+S + G  +  N  P+T  S      EEQ+
Sbjct: 205 SSRSLTEEEQQRIERNKQLALERRQAKLLSNSQSLGNDLSVN-TPSTQTSEAGSTGEEQK 249

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BLAST of Cla013615 vs. Swiss-Prot
Match: TIPIN_RAT (TIMELESS-interacting protein OS=Rattus norvegicus GN=Tipin PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.6e-13
Identity = 66/247 (26.72%), Postives = 104/247 (42.11%), Query Frame = 1


Query: 28  PSSAPNPNPNPNPNPTSNSSTPPFSSAPAAPSKIAEKPKKPPRTRPKLTPDLLLSEDGLG 87
           P  +P  +P     P   S  P     P  P +I +      R  PKL    L SE GL 
Sbjct: 28  PPGSPERDP-AEAEPDEGSGAP----VPVPPKRIVK------RNIPKLDATRLTSERGLP 87

Query: 88  YVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKM 147
             LRH     K++G+GHE  DL+ LI     W   + P   FE F+ +VE +   K V+ 
Sbjct: 88  -ALRHVFDKTKFKGKGHEAEDLKTLIRHMEHWAHRLFPKLQFEDFIDRVENLGNKKEVQT 147

Query: 148 CLGELRERVARGGDPTKWREAPILNDDDVNNEKEAKDPEGV------FDDLEEAS----- 207
           CL  +R             + PI+++D VNN  E ++   +      FD    +S     
Sbjct: 148 CLKRIR------------LDLPIVHEDFVNNNDEVEETNSLDAAATGFDAFVTSSSDSKR 207

Query: 208 LRNNCADDIEEDMLQEVYEKATEKPLQNLQSDSFTNGETMVANQEPNTSNSSETQLTEEQ 264
             +  + ++ E+  Q + EK  +  L+  Q+   +N +++  +     S++ E Q  EE 
Sbjct: 208 FASEASRNLTEEQQQRI-EKNKQLALERRQAKLLSNSQSLENDVTVEESSTGENQ--EES 247

HSP 2 Score: 29.6 bits (65), Expect = 6.6e+01
Identity = 15/33 (45.45%), Postives = 20/33 (60.61%), Query Frame = 1


Query: 245 SNSSETQLTEEQRGRMEANRLKALERAAAKARS 278
           ++ +   LTEEQ+ R+E N+  ALER  AK  S
Sbjct: 185 ASEASRNLTEEQQQRIEKNKQLALERRQAKLLS 217

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BLAST of Cla013615 vs. Swiss-Prot
Match: TIPIN_HUMAN (TIMELESS-interacting protein OS=Homo sapiens GN=TIPIN PE=1 SV=2)

HSP 1 Score: 77.4 bits (189), Expect = 2.8e-13
Identity = 67/240 (27.92%), Postives = 99/240 (41.25%), Query Frame = 1


Query: 32  PNPNPNPNPNPTSNSSTPPFSSAPAAPSKIAEKPKKPPRTRPKLTPDLLLSEDGLGYVLR 91
           P P P          + P   S   AP ++  K +   R  PKL    L+SE GL   LR
Sbjct: 25  PFPPPASPERQDGEGTEPDEESGNGAPVRVPPK-RTVKRNIPKLDAQRLISERGLP-ALR 84

Query: 92  HFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGE 151
           H     K++G+GHE  DL+ LI     W   + P   FE F+ +VE + + K V+ CL  
Sbjct: 85  HVFDKAKFKGKGHEAEDLKMLIRHMEHWAHRLFPKLQFEDFIDRVEYLGSKKEVQTCLKR 144

Query: 152 LRERVARGGDPTKWREAPILNDDDV-NNEKEAKDPEGVFDDLEEASLRNNC------ADD 211
           +R             + PIL++D V NN++ A++ E      E      N       A +
Sbjct: 145 IR------------LDLPILHEDFVSNNDEVAENNEHDVTSTELDPFLTNLSESEMFASE 204

Query: 212 IEEDMLQEVYEK-------ATEKPLQNLQSDSFTNGETMVANQEPNTSNSSETQLTEEQR 258
           +   + +E  ++       A E+    L S+S T G  M+ N  P      E    E+Q+
Sbjct: 205 LSRSLTEEQQQRIERNKQLALERRQAKLLSNSQTLGNDMLMN-TPRAHTVEEVNTDEDQK 249

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BLAST of Cla013615 vs. Swiss-Prot
Match: TIPIN_MOUSE (TIMELESS-interacting protein OS=Mus musculus GN=Tipin PE=1 SV=2)

HSP 1 Score: 70.5 bits (171), Expect = 3.4e-11
Identity = 64/233 (27.47%), Postives = 97/233 (41.63%), Query Frame = 1


Query: 38  PNPNPTSNSSTPPFSSAP-AAPSKIAEKPKKP-PRTRPKLTPDLLLSEDGLGYVLRHFPR 97
           P P P S    P  +     + S +   PK+   R  PKL    L SE GL   LRH   
Sbjct: 25  PFPPPASPERDPADAEPEEGSGSGVPVPPKRTVKRNLPKLDATRLTSERGLP-ALRHVFD 84

Query: 98  AFKYRGRGHEISDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRER 157
             K++G+GHE  DL+ LI     W   + P   FE F+ +VE +   K V+ CL  +R  
Sbjct: 85  KTKFKGKGHEAEDLKTLIRHMEHWAHRLFPKLQFEDFIDRVENLGNKKEVQTCLKRIR-- 144

Query: 158 VARGGDPTKWREAPILNDDDVNNEKEAKDPEGV------FDD-LEEASLRNNCADDIEED 217
                      + PI+++D VNN  E  +  G       FD  L  +S     A +    
Sbjct: 145 ----------LDLPIVHEDFVNNNDEVGEANGPDVSATGFDPFLTSSSDSRKFASEPTRS 204

Query: 218 MLQEV---YEKATEKPLQNLQSDSFTNGETMVANQEPNTSNSSETQLTEEQRG 259
           + +E     E+  +  L+  Q+   +N +++  +     +++ E Q  EE  G
Sbjct: 205 LTEEQQQRIERNKQLALERRQAKLLSNSQSLENDVTVEENSTGEDQ--EESNG 242

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BLAST of Cla013615 vs. Swiss-Prot
Match: TIPIN_XENLA (TIMELESS-interacting protein OS=Xenopus laevis GN=tipin PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 5.7e-11
Identity = 51/214 (23.83%), Postives = 90/214 (42.06%), Query Frame = 1


Query: 43  TSNSSTPPFSSAPAAPSKIAEKPKKPPRTRPKLTPDLLLSEDGLGYVLRHFPRAFKYRGR 102
           T N+       AP    ++ ++P+      PKL    L S+ GL   LRH     K++G+
Sbjct: 48  TENAGQTQREEAPKPARRVVKRPQ------PKLDGQRLASQRGLP-ALRHMFDDVKFKGK 107

Query: 103 GHEISDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDP 162
           GHE  DL+ L+     W   + P   FE F++++E +   K V+ CL ++R         
Sbjct: 108 GHETEDLKILLRQMENWAHRLFPKLQFEDFLNRLESMGNKKEVQTCLKKIR--------- 167

Query: 163 TKWREAPILNDDDVNNEKEAKDPEGVF----------DDLEEASLRNNCADDIEEDMLQE 222
               + PI++DD ++ E   +  +             D+L   S       D+ E+ LQ 
Sbjct: 168 ---MDLPIVHDDFLSEEVVVQTEDHAIDMPSEDFSFPDELHVPSPSQPVKVDLSEETLQR 227

Query: 223 VYEK---ATEKPLQNLQSDSFTNGETMVANQEPN 244
           +      A E+ ++ +Q+ + +   +     +PN
Sbjct: 228 IERNRRLALERRMEKMQAQAESQALSQATQSDPN 242

[Close]

BLAST of Cla013615 vs. TrEMBL
Match: A0A0A0LI96_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G009510 PE=4 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 2.3e-136
Identity = 251/286 (87.76%), Postives = 259/286 (90.56%), Query Frame = 1


Query: 1   MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPNPNPNPTSNSSTPPFSSAPAAPSK 60
           MEKDN AV APTGC+KCGKPGHWSRDCPSSA      PNPNPTSNSSTP FSS PAAPSK
Sbjct: 1   MEKDNNAVPAPTGCFKCGKPGHWSRDCPSSA------PNPNPTSNSSTPSFSSPPAAPSK 60

Query: 61  IAEKPKKPPRTRPKLTPDLLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWH 120
             EKPKK PRTRPKLTP+LLLS+DGLGYVLRHFPRAFKYRGRGHEI+DLENLIGLYREWH
Sbjct: 61  AVEKPKKAPRTRPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLYREWH 120

Query: 121 SHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILN--DDDVNN 180
           SHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILN  DDDVNN
Sbjct: 121 SHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDDVNN 180

Query: 181 EKEAKDPEGVFDDLEEASLRNNCADDIEEDMLQEVYEKATEKPLQNLQSDSFTNGETM-- 240
           EKEAKDP+ VFD+ EEASLRNN ADDIEEDMLQEVYEKATE+PLQN QSDS T G TM  
Sbjct: 181 EKEAKDPDDVFDNQEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTIGGTMEG 240

Query: 241 VANQEPNTSNSSET-QLTEEQRGRMEANRLKALERAAAKARSLPTV 282
           VANQEP TSNSSET +LTEEQR RMEANRLKALERAAAKARSLPTV
Sbjct: 241 VANQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLPTV 280

[Close]

BLAST of Cla013615 vs. TrEMBL
Match: W9SKS8_9ROSA (TIMELESS-interacting protein OS=Morus notabilis GN=L484_014991 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 4.3e-90
Identity = 181/278 (65.11%), Postives = 206/278 (74.10%), Query Frame = 1


Query: 9   AAPTGCYKCGKPGHWSRDCPSSAPNPNPNPNPNPTSNSSTPP---FSSAPAAPSKIAEKP 68
           AAPTGCYKCG+PGHWSRDCPSSAP PN NPN N TS  STP    F S P    K + KP
Sbjct: 6   AAPTGCYKCGRPGHWSRDCPSSAPIPNSNPNLN-TSFRSTPSSSSFKSGPGTAEKSSAKP 65

Query: 69  KK---PPRTRPKLTPDLLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSH 128
            K   PPR RPKLTP LLLS+DGLGYVLRHFPRAFKYRGRGHE+SDL NLI +Y EWHS 
Sbjct: 66  PKKVLPPRVRPKLTPQLLLSDDGLGYVLRHFPRAFKYRGRGHEVSDLGNLIRMYGEWHSR 125

Query: 129 ILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDVNNEKEA 188
           +LPYYSF+ FVHKVEQVAATKRVK CL ELRERVA GGDPTK  E P+  D++ ++ +EA
Sbjct: 126 LLPYYSFDQFVHKVEQVAATKRVKTCLRELRERVASGGDPTKLHEPPV-EDENPHDGQEA 185

Query: 189 KDPEGVFDDLEEASLRNNCADDIEEDMLQEVYEKATEKPLQNLQSDSFTNGETMVANQEP 248
              E V    E++S +N+  DDI+EDMLQ+VYE A E+P  NLQ+      E  + NQ P
Sbjct: 186 ISSEEVRHHKEDSSSKNHNIDDIQEDMLQDVYENAIEQPSANLQNGITPAKE--LPNQVP 245

Query: 249 N--TSNSSETQLTEEQRGRMEANRLKALERAAAKARSL 279
           N   S S E  +TEEQR RMEANRLKALE+AAA+ARSL
Sbjct: 246 NDKVSQSIENDITEEQRARMEANRLKALEKAAARARSL 279

[Close]

BLAST of Cla013615 vs. TrEMBL
Match: D7TAF5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g01670 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 5.0e-86
Identity = 166/289 (57.44%), Postives = 207/289 (71.63%), Query Frame = 1


Query: 1   MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPNPNPNPTSNSSTPPFSSAPAAP-- 60
           MEK  AA   PTGCYKCG+PGHWSRDCPSS  NPNPNPNPNP S +    F+   A+   
Sbjct: 1   MEKSGAA---PTGCYKCGRPGHWSRDCPSSNTNPNPNPNPNPNSQNQYSSFNKGTASKPL 60

Query: 61  SKIAEKPKKPPRTRPKLTPDLLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYRE 120
           +K +EKPKK PRTRP LTP+LLLS++GLGYVLRHFP AFK+RGRGHE+SDL NLIGLY E
Sbjct: 61  AKSSEKPKKAPRTRPNLTPELLLSDNGLGYVLRHFPGAFKFRGRGHEVSDLGNLIGLYSE 120

Query: 121 WHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDVNN 180
           WHSH+LPYYSF+ FVHKVE+V  TKRVK+C+ ELRERV  GGD TK+ E P+ ++D  N+
Sbjct: 121 WHSHLLPYYSFDQFVHKVEKVGTTKRVKICIRELRERVENGGDLTKFHEPPVEHEDCPNH 180

Query: 181 EKEAKDPEGVFDDLEEASLRNNCA---DDIEEDMLQEVYEKATEKPLQNLQSD------- 240
           ++     E V + ++ +  + + +   +D++EDML EVY  ATE+P Q L SD       
Sbjct: 181 DQGLPATEEVMNSVDPSHYQGDTSLNHEDVQEDMLHEVYRSATEEPSQTLASDMVAGDVP 240

Query: 241 SFTNGETMVANQEP-NTSNSSETQLTEEQRGRMEANRLKALERAAAKAR 277
           S  + +  + NQ P N    S+ Q+TEEQ+ RMEANR KALERAAA+ R
Sbjct: 241 SEGSSKKELPNQVPENGPIRSDIQITEEQKARMEANRQKALERAAARVR 286

[Close]

BLAST of Cla013615 vs. TrEMBL
Match: B9HVL9_POPTR (Zinc knuckle family protein OS=Populus trichocarpa GN=POPTR_0010s10750g PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 3.2e-85
Identity = 171/292 (58.56%), Postives = 210/292 (71.92%), Query Frame = 1


Query: 1   MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPNPNPN-----PTSNSSTPP----F 60
           MEK NAA   PTGCYKCG+PGHWSRDCP S PNPNP+ NPN     P++N+S+      F
Sbjct: 1   MEKTNAA---PTGCYKCGRPGHWSRDCPDSNPNPNPSSNPNSPRSFPSNNNSSSNNSNYF 60

Query: 61  SSAPAAPSKIAEKPKKPPRTRPKLTPDLLLSED-GLGYVLRHFPRAFKYRGRGHEISDLE 120
           S + + P+K AEKPKK PR+RPKLTP+LLL ED GLG++LRHFPR FKYRGRGHE+SDL 
Sbjct: 61  SGSNSKPAKAAEKPKKVPRSRPKLTPELLLGEDNGLGFILRHFPRNFKYRGRGHEVSDLG 120

Query: 121 NLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPI 180
           NLIGLY EWHSH+LPYYSF+ FVHKVEQVAATKR KMC+ ELRERVA GGDPTK RE+ +
Sbjct: 121 NLIGLYSEWHSHLLPYYSFDQFVHKVEQVAATKRAKMCVRELRERVASGGDPTKLRES-L 180

Query: 181 LNDDDVNNEKEAKDP-EGVFDDL----EEASLRNNCADDIEEDMLQEVYEKATEKPLQNL 240
                 N E +   P EG+  ++    E+   +N   D + EDML EVY++ATE+P Q L
Sbjct: 181 TEHVSANVEHDLSTPDEGLNSEVTHNEEDPLSKNQDVDGLPEDMLHEVYDRATEEPTQTL 240

Query: 241 QSDSFTNGETMVANQEPNTSNSSETQLTEEQRGRMEANRLKALERAAAKARS 278
                   +  + N+    S S+E  ++EEQ+ RMEANRL+ALERAAA+A+S
Sbjct: 241 D-----RRDMELPNEINGASCSNEVSISEEQKARMEANRLRALERAAARAQS 283

[Close]

BLAST of Cla013615 vs. TrEMBL
Match: M5XSL1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009221mg PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 9.3e-85
Identity = 172/296 (58.11%), Postives = 204/296 (68.92%), Query Frame = 1


Query: 9   AAPTGCYKCGKPGHWSRDCPSSAP--------------NPNPNPNPNPTS-NSSTPPFSS 68
           A  TGCYKCG+PGHWSRDCPSSAP              NPNPNPNP PT+ NSS+  F S
Sbjct: 4   APATGCYKCGRPGHWSRDCPSSAPAPNSNSNPDPNPNPNPNPNPNPKPTNPNSSSYSFKS 63

Query: 69  APAAPSKIAEKPKKP--PRTRPKLTPDLLLSEDGLGYVLRHFPRAFKYRGRGHEISDLEN 128
                   A K KK   P+TRPKLTP LLLS+DGLGYVLRHFPRAFKYRGRG+E+ DL N
Sbjct: 64  GTGVGGSGASKAKKVSVPKTRPKLTPQLLLSDDGLGYVLRHFPRAFKYRGRGNEVRDLGN 123

Query: 129 LIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPIL 188
           LIGLY EWHS +LPYYSF+ FVHKVEQVA+T++VKM L ELRERVA GGDPTK RE P+ 
Sbjct: 124 LIGLYTEWHSRLLPYYSFDQFVHKVEQVASTRQVKMSLRELRERVASGGDPTKLREPPV- 183

Query: 189 NDDDVNNEKEAKDPEGVFDDLEEASLRNNCADDIEEDMLQEVYEKATEKPLQNLQSDSFT 248
              + N+++E  +PEG        S  N+ ADD++EDML E+YEKATE+P ++L  D   
Sbjct: 184 EQGNPNDQQETLNPEGPSHQPGGLSSGNHDADDMQEDMLHEIYEKATEEPSEHLHGDMVA 243

Query: 249 NGETM-------VANQEPN--TSNSSETQLTEEQRGRMEANRLKALERAAAKARSL 279
              +        + NQ PN   S S E Q+T+EQR RMEA+RLKALE+AAA+ R L
Sbjct: 244 ASISAPGSFLKELTNQFPNNEASESKENQMTDEQRARMEASRLKALEKAAARRRQL 298

[Close]

BLAST of Cla013615 vs. NCBI nr
Match: gi|659070757|ref|XP_008456510.1| (PREDICTED: TIMELESS-interacting protein [Cucumis melo])

HSP 1 Score: 498.4 bits (1282), Expect = 8.0e-138
Identity = 256/289 (88.58%), Postives = 262/289 (90.66%), Query Frame = 1


Query: 1   MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPNPNPNPTSNSSTPPFSSAPAAPSK 60
           M+KDN A+AAPTGCYKCGKPGHWSRDCPSSA      PNPNPTSNSS PPFSSAPAAPSK
Sbjct: 1   MDKDNNAIAAPTGCYKCGKPGHWSRDCPSSA------PNPNPTSNSSKPPFSSAPAAPSK 60

Query: 61  IAEKPKKPPRTRPKLTPDLLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWH 120
             EKPKK PRTRPKLTP+LLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWH
Sbjct: 61  AVEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWH 120

Query: 121 SHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILN-DDDVNNE 180
           SHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILN DDDVNNE
Sbjct: 121 SHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDVNNE 180

Query: 181 KEAKDPEGVFDDLEEASLRNNCADDIEEDMLQEVYEKATEKPLQNLQSDSFTNGETM--V 240
           KEAKDPEGVFD+ EEASLRNN ADDIEEDMLQEVYEKATE+PLQN QSDS T G TM  V
Sbjct: 181 KEAKDPEGVFDNPEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTTGGTMEGV 240

Query: 241 ANQEPN----TSNSSET-QLTEEQRGRMEANRLKALERAAAKARSLPTV 282
           ANQEPN    TSNSSET +LTEEQR RMEANRLKALERAAAKARSL TV
Sbjct: 241 ANQEPNQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLATV 283

[Close]

BLAST of Cla013615 vs. NCBI nr
Match: gi|449443255|ref|XP_004139395.1| (PREDICTED: TIMELESS-interacting protein [Cucumis sativus])

HSP 1 Score: 493.0 bits (1268), Expect = 3.4e-136
Identity = 251/286 (87.76%), Postives = 259/286 (90.56%), Query Frame = 1


Query: 1   MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPNPNPNPTSNSSTPPFSSAPAAPSK 60
           MEKDN AV APTGC+KCGKPGHWSRDCPSSA      PNPNPTSNSSTP FSS PAAPSK
Sbjct: 1   MEKDNNAVPAPTGCFKCGKPGHWSRDCPSSA------PNPNPTSNSSTPSFSSPPAAPSK 60

Query: 61  IAEKPKKPPRTRPKLTPDLLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWH 120
             EKPKK PRTRPKLTP+LLLS+DGLGYVLRHFPRAFKYRGRGHEI+DLENLIGLYREWH
Sbjct: 61  AVEKPKKAPRTRPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLYREWH 120

Query: 121 SHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILN--DDDVNN 180
           SHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILN  DDDVNN
Sbjct: 121 SHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDDDVNN 180

Query: 181 EKEAKDPEGVFDDLEEASLRNNCADDIEEDMLQEVYEKATEKPLQNLQSDSFTNGETM-- 240
           EKEAKDP+ VFD+ EEASLRNN ADDIEEDMLQEVYEKATE+PLQN QSDS T G TM  
Sbjct: 181 EKEAKDPDDVFDNQEEASLRNNGADDIEEDMLQEVYEKATEEPLQNEQSDSLTIGGTMEG 240

Query: 241 VANQEPNTSNSSET-QLTEEQRGRMEANRLKALERAAAKARSLPTV 282
           VANQEP TSNSSET +LTEEQR RMEANRLKALERAAAKARSLPTV
Sbjct: 241 VANQEPKTSNSSETSELTEEQRVRMEANRLKALERAAAKARSLPTV 280

[Close]

BLAST of Cla013615 vs. NCBI nr
Match: gi|703159670|ref|XP_010112308.1| (TIMELESS-interacting protein [Morus notabilis])

HSP 1 Score: 339.3 bits (869), Expect = 6.2e-90
Identity = 181/278 (65.11%), Postives = 206/278 (74.10%), Query Frame = 1


Query: 9   AAPTGCYKCGKPGHWSRDCPSSAPNPNPNPNPNPTSNSSTPP---FSSAPAAPSKIAEKP 68
           AAPTGCYKCG+PGHWSRDCPSSAP PN NPN N TS  STP    F S P    K + KP
Sbjct: 6   AAPTGCYKCGRPGHWSRDCPSSAPIPNSNPNLN-TSFRSTPSSSSFKSGPGTAEKSSAKP 65

Query: 69  KK---PPRTRPKLTPDLLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSH 128
            K   PPR RPKLTP LLLS+DGLGYVLRHFPRAFKYRGRGHE+SDL NLI +Y EWHS 
Sbjct: 66  PKKVLPPRVRPKLTPQLLLSDDGLGYVLRHFPRAFKYRGRGHEVSDLGNLIRMYGEWHSR 125

Query: 129 ILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDVNNEKEA 188
           +LPYYSF+ FVHKVEQVAATKRVK CL ELRERVA GGDPTK  E P+  D++ ++ +EA
Sbjct: 126 LLPYYSFDQFVHKVEQVAATKRVKTCLRELRERVASGGDPTKLHEPPV-EDENPHDGQEA 185

Query: 189 KDPEGVFDDLEEASLRNNCADDIEEDMLQEVYEKATEKPLQNLQSDSFTNGETMVANQEP 248
              E V    E++S +N+  DDI+EDMLQ+VYE A E+P  NLQ+      E  + NQ P
Sbjct: 186 ISSEEVRHHKEDSSSKNHNIDDIQEDMLQDVYENAIEQPSANLQNGITPAKE--LPNQVP 245

Query: 249 N--TSNSSETQLTEEQRGRMEANRLKALERAAAKARSL 279
           N   S S E  +TEEQR RMEANRLKALE+AAA+ARSL
Sbjct: 246 NDKVSQSIENDITEEQRARMEANRLKALEKAAARARSL 279

[Close]

BLAST of Cla013615 vs. NCBI nr
Match: gi|719963591|ref|XP_010250197.1| (PREDICTED: TIMELESS-interacting protein isoform X2 [Nelumbo nucifera])

HSP 1 Score: 329.7 bits (844), Expect = 4.9e-87
Identity = 172/289 (59.52%), Postives = 205/289 (70.93%), Query Frame = 1


Query: 9   AAPTGCYKCGKPGHWSRDCPSSAPNPNPNPNPNPTSNSSTPPF--SSAPAAPSKIAEKPK 68
           +APTGCYKCG+PGHWSRDCPS++ NP+ N NPN +SN S P F  S  P    K  EKPK
Sbjct: 6   SAPTGCYKCGRPGHWSRDCPSASTNPSSNSNPNSSSNFSRPSFKNSGIPKPTDKALEKPK 65

Query: 69  KPPRTRPKLTPDLLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPY 128
           K PRTRPKLTP LLLS DGLGYVLRHFPR+FK+RGRGHE+SDL NLIGLY EWHSH+LPY
Sbjct: 66  KVPRTRPKLTPGLLLSNDGLGYVLRHFPRSFKFRGRGHEVSDLRNLIGLYAEWHSHLLPY 125

Query: 129 YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDVNNEKEAKD-- 188
           YSF+ FVHKVE+V AT RV+ C+ ELRERVA GGDP+K  E P+        E++ +D  
Sbjct: 126 YSFDQFVHKVEKVGATNRVRTCIKELRERVANGGDPSKLHEPPV--------EQDGRDCE 185

Query: 189 PEGVF----DDLE--EASLRNNCADDIEEDMLQEVYEKATEKPLQNLQSDSFTNGETMVA 248
           PEG       DLE  E S RNN ADD++  M  E+Y+K TE+  Q+L S   ++G T V 
Sbjct: 186 PEGAMTLEKPDLEMGEQSTRNNDADDVQGHMFDEIYQKITEESPQSLPSQMVSSGVTSVH 245

Query: 249 NQEPNTSN---------SSETQLTEEQRGRMEANRLKALERAAAKARSL 279
           N    + N         SSE ++TEEQR RMEANRLKALERAAA+A+S+
Sbjct: 246 NLIKESLNQVLDTGGNGSSEIRITEEQRTRMEANRLKALERAAARAKSV 286

[Close]

BLAST of Cla013615 vs. NCBI nr
Match: gi|719963587|ref|XP_010250188.1| (PREDICTED: TIMELESS-interacting protein isoform X1 [Nelumbo nucifera])

HSP 1 Score: 327.4 bits (838), Expect = 2.4e-86
Identity = 168/283 (59.36%), Postives = 201/283 (71.02%), Query Frame = 1


Query: 9   AAPTGCYKCGKPGHWSRDCPSSAPNPNPNPNPNPTSNSSTPPF--SSAPAAPSKIAEKPK 68
           +APTGCYKCG+PGHWSRDCPS++ NP+ N NPN +SN S P F  S  P    K  EKPK
Sbjct: 6   SAPTGCYKCGRPGHWSRDCPSASTNPSSNSNPNSSSNFSRPSFKNSGIPKPTDKALEKPK 65

Query: 69  KPPRTRPKLTPDLLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPY 128
           K PRTRPKLTP LLLS DGLGYVLRHFPR+FK+RGRGHE+SDL NLIGLY EWHSH+LPY
Sbjct: 66  KVPRTRPKLTPGLLLSNDGLGYVLRHFPRSFKFRGRGHEVSDLRNLIGLYAEWHSHLLPY 125

Query: 129 YSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILND--DDVNNEKEAKD 188
           YSF+ FVHKVE+V AT RV+ C+ ELRERVA GGDP+K  E P+  D  D     + A  
Sbjct: 126 YSFDQFVHKVEKVGATNRVRTCIKELRERVANGGDPSKLHEPPVEQDGRDCEPGAEGAMT 185

Query: 189 PEGVFDDLEEASLRNNCADDIEEDMLQEVYEKATEKPLQNLQSDSFTNGETMVANQEPNT 248
            E    ++ E S RNN ADD++  M  E+Y+K TE+  Q+L S   ++G T V N    +
Sbjct: 186 LEKPDLEMGEQSTRNNDADDVQGHMFDEIYQKITEESPQSLPSQMVSSGVTSVHNLIKES 245

Query: 249 SN---------SSETQLTEEQRGRMEANRLKALERAAAKARSL 279
            N         SSE ++TEEQR RMEANRLKALERAAA+A+S+
Sbjct: 246 LNQVLDTGGNGSSEIRITEEQRTRMEANRLKALERAAARAKSV 288

The following BLAST results are available for this feature:

BLAST of Cla013615 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TIPIN_BOVIN	1.1e-14	27.50	TIMELESS-interacting protein OS=Bos taurus GN=TIPIN PE=2 SV=1	[more]
TIPIN_RAT	1.6e-13	26.72	TIMELESS-interacting protein OS=Rattus norvegicus GN=Tipin PE=2 SV=1	[more]
TIPIN_HUMAN	2.8e-13	27.92	TIMELESS-interacting protein OS=Homo sapiens GN=TIPIN PE=1 SV=2	[more]
TIPIN_MOUSE	3.4e-11	27.47	TIMELESS-interacting protein OS=Mus musculus GN=Tipin PE=1 SV=2	[more]
TIPIN_XENLA	5.7e-11	23.83	TIMELESS-interacting protein OS=Xenopus laevis GN=tipin PE=1 SV=1	[more]

BLAST of Cla013615 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LI96_CUCSA	2.3e-136	87.76	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G009510 PE=4 SV=1	[more]
W9SKS8_9ROSA	4.3e-90	65.11	TIMELESS-interacting protein OS=Morus notabilis GN=L484_014991 PE=4 SV=1	[more]
D7TAF5_VITVI	5.0e-86	57.44	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g01670 PE=4 SV=...	[more]
B9HVL9_POPTR	3.2e-85	58.56	Zinc knuckle family protein OS=Populus trichocarpa GN=POPTR_0010s10750g PE=4 SV=...	[more]
M5XSL1_PRUPE	9.3e-85	58.11	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009221mg PE=4 SV=1	[more]

BLAST of Cla013615 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659070757\|ref\|XP_008456510.1\|	8.0e-138	88.58	PREDICTED: TIMELESS-interacting protein [Cucumis melo]	[more]
gi\|449443255\|ref\|XP_004139395.1\|	3.4e-136	87.76	PREDICTED: TIMELESS-interacting protein [Cucumis sativus]	[more]
gi\|703159670\|ref\|XP_010112308.1\|	6.2e-90	65.11	TIMELESS-interacting protein [Morus notabilis]	[more]
gi\|719963591\|ref\|XP_010250197.1\|	4.9e-87	59.52	PREDICTED: TIMELESS-interacting protein isoform X2 [Nelumbo nucifera]	[more]
gi\|719963587\|ref\|XP_010250188.1\|	2.4e-86	59.36	PREDICTED: TIMELESS-interacting protein isoform X1 [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001878	Znf_CCHC
IPR012923	Csm3

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0008270	zinc ion binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006974	cellular response to DNA damage stimulus
GO:0007049	cell cycle
GO:0048478	replication fork protection

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007049	cell cycle
biological_process	GO:0006974	cellular response to DNA damage stimulus
biological_process	GO:0048478	replication fork protection
biological_process	GO:0006275	regulation of DNA replication
biological_process	GO:0000076	DNA replication checkpoint
biological_process	GO:0043111	replication fork arrest
cellular_component	GO:0005634	nucleus
cellular_component	GO:0031298	replication fork protection complex
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla013615	Cla013615.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	GENE3D	G3DSA:4.10.60.10		coord: 12..29 score: 2.
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 13..29 score: 1.
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 13..29 score: 7.
IPR001878	Zinc finger, CCHC-type	PROFILE	PS50158	ZF_CCHC	coord: 14..29 score: 11
IPR001878	Zinc finger, CCHC-type	unknown	SSF57756	Retrovirus zinc finger-like domains	coord: 11..32 score: 1.9
IPR012923	Chromosome segregation in meiosis protein 3	PRODOM	PD089639		coord: 82..157 score: 9.0
IPR012923	Chromosome segregation in meiosis protein 3	PFAM	PF07962	Swi3	coord: 74..155 score: 3.3
None	No IPR available	PANTHER	PTHR13220	TIMELESS INTERACTING-RELATED	coord: 7..277 score: 9.6
None	No IPR available	PANTHER	PTHR13220:SF11	TIMELESS-INTERACTING PROTEIN	coord: 7..277 score: 9.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla013615	Cla97C02G042780	Watermelon (97103) v2	wmwmbB316
Cla013615	Csa2G009510	Cucumber (Chinese Long) v2	cuwmB147
Cla013615	MELO3C004425	Melon (DHL92) v3.5.1	mewmB418
Cla013615	ClCG02G017080	Watermelon (Charleston Gray)	wcgwmB197
Cla013615	CSPI02G02530	Wild cucumber (PI 183967)	cpiwmB149
Cla013615	Cucsa.132860	Cucumber (Gy14) v1	cgywmB223
Cla013615	CmaCh05G012330	Cucurbita maxima (Rimu)	cmawmB764
Cla013615	CmoCh05G012590	Cucurbita moschata (Rifu)	cmowmB757
Cla013615	Lsi11G004040	Bottle gourd (USVL1VR-Ls)	lsiwmB107
Cla013615	Cp4.1LG11g10150	Cucurbita pepo (Zucchini)	cpewmB113
Cla013615	CsGy2G002630	Cucumber (Gy14) v2	cgybwmB140
Cla013615	MELO3C004425.2	Melon (DHL92) v3.6.1	medwmB407
Cla013615	Carg23009	Silver-seed gourd	carwmB1071
Cla013615	CsaV3_2G003690	Cucumber (Chinese Long) v3	cucwmB159
Cla013615	Bhi06G001544	Wax gourd	wgowmB136

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla013615	Cucurbita maxima (Rimu)	cmawmB170
Cla013615	Cucurbita moschata (Rifu)	cmowmB156
Cla013615	Cucurbita pepo (Zucchini)	cpewmB806
Cla013615	Cucurbita pepo (Zucchini)	cpewmB809
Cla013615	Silver-seed gourd	carwmB0242
Cla013615	Wax gourd	wgowmB133