Cucsa.121450 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.121450
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	NADH-ubiquinone oxidoreductase, subunit 10
Location	scaffold00999 : 32220 .. 37487 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGCGAAAGCGATTCTTAGACTGAGAGCAAGAACAGCACAAGGAAGAGAAGAGAAAGGGGAAAAGCTATGGGGAGGAAGAAGACAGTGGAGTTCGATGAATCTCCGCCGGACGATTTCGATCCGGAGAATCCGTATAAGGATCCAGTGGCGATGTTAGAGATGAGGGAATACATTGTAAGAGAGAAGTGGATCGATATTGAAAAGGCCAAGATACTGAGGGAAAAGCTCAGATGGTGCTACCGTATCGAAGGAGTCAACCATCTGCAGAAATGCCGTCACCTCGTTCAACAATACCTTGATTCCACTCGTGGCATCGGCTGGGGCAAGGACGGGCGCCACCCATCCCTTCACGGTACTCGTTATGTTTAATCTTCGAGAAATTTTAGCAAATTTGCATTTTTGTTGCCTTTTTGGGAGAAAATGGAGATAGTCCGAGGTACTGGAATTAGTTTGTGATTGGAAGTGATGCTCACCAGTGGAAATTTGTTCCGTATTGAAGTTGTTTTCTGAAATATCTTTGGTTTATGAATCCCCGTGGACGTATACTTTTTGAAATCAATCTGATTATTTTTGAAGTTGTTACTCGCTGGCTGGATTTTTCTCCATTTTTTCCTTTTTTGTTTGGGTTTCCTATGTAATTTCAATGACCGAGTGAATGAATTAACTATACGTTCTCTACAATCATCTGATGTTGTTTGCTTCTTGCTTTGGTTAGGTCCTAAAGTGGAGCCAGCCGAATCTGAGTGATCCTCTGGGTGGAACAACGGTGAGTTCAAATGTTTGCAAGTTTTTGGTTAATTTCAGTTCCTCGTCGTACTGAAAATCAAACCTTTTCTTTTTGTCAAAGCTTGAATAAATAACAGTGTATATCAGCTCTTTGCTTTATTCTTGTACTGCTACGAGGTGTGAAAAGAATTATTAACTCAGATCAGTGGTTAATAATTCCGTTTAGTTTTTAACTCTCTGTAAGTGTGATAACTTTGTGGCAATGCCTGCAAGCTTTCCTAACATTTTTTTGAATGGTAGCTTGTTTCTTAGAATGACTGAAATTTCTGAAAGGCTACACAATCATA

mRNA sequence

GCGCGAAAGCGATTCTTAGACTGAGAGCAAGAACAGCACAAGGAAGAGAAGAGAAAGGGGAAAAGCTATGGGGAGGAAGAAGACAGTGGAGTTCGATGAATCTCCGCCGGACGATTTCGATCCGGAGAATCCGTATAAGGATCCAGTGGCGATGTTAGAGATGAGGGAATACATTGTAAGAGAGAAGTGGATCGATATTGAAAAGGCCAAGATACTGAGGGAAAAGCTCAGATGGTGCTACCGTATCGAAGGAGTCAACCATCTGCAGAAATGCCGTCACCTCGTTCAACAATACCTTGATTCCACTCGTGGCATCGGCTGGGGCAAGGACGGGCGCCACCCATCCCTTCACGGTCCTAAAGTGGAGCCAGCCGAATCTGAGTGATCCTCTGGGTGGAACAACGGTGAGTTCAAATGTTTGCAAGTTTTTGGTTAATTTCAGTTCCTCGTCGTACTGAAAATCAAACCTTTTCTTTTTGTCAAAGCTTGAATAAATAACAGTGTATATCAGCTCTTTGCTTTATTCTTGTACTGCTACGAGGTGTGAAAAGAATTATTAACTCAGATCAGTGGTTAATAATTCCGTTTAGTTTTTAACTCTCTGTAAGTGTGATAACTTTGTGGCAATGCCTGCAAGCTTTCCTAACATTTTTTTGAATGGTAGCTTGTTTCTTAGAATGACTGAAATTTCTGAAAGGCTACACAATCATA

Coding sequence (CDS)

ATGGGGAGGAAGAAGACAGTGGAGTTCGATGAATCTCCGCCGGACGATTTCGATCCGGAGAATCCGTATAAGGATCCAGTGGCGATGTTAGAGATGAGGGAATACATTGTAAGAGAGAAGTGGATCGATATTGAAAAGGCCAAGATACTGAGGGAAAAGCTCAGATGGTGCTACCGTATCGAAGGAGTCAACCATCTGCAGAAATGCCGTCACCTCGTTCAACAATACCTTGATTCCACTCGTGGCATCGGCTGGGGCAAGGACGGGCGCCACCCATCCCTTCACGGTCCTAAAGTGGAGCCAGCCGAATCTGAGTGA

Protein sequence

MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVEPAESE*

Homology

[Close]

BLAST of Cucsa.121450 vs. Swiss-Prot
Match: NDBAB_ARATH (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B OS=Arabidopsis thaliana GN=At3g18410 PE=2 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 1.8e-45
Identity = 85/106 (80.19%), Postives = 94/106 (88.68%), Query Frame = 1


Query: 1   MGRKKTV-EFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYR 60
           MGRKK + EF+ES PD FDPENPYKDPVAM+EMRE+IVREKWI IEKAKILREK++WCYR
Sbjct: 1   MGRKKGLPEFEESAPDGFDPENPYKDPVAMVEMREHIVREKWIQIEKAKILREKVKWCYR 60

Query: 61  IEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVEPAESE 106
           +EGVNH QKCRHLVQQYLDSTRG+GWGKD R  SLHGPK E  E+E
Sbjct: 61  VEGVNHYQKCRHLVQQYLDSTRGVGWGKDHRPISLHGPKPEAVEAE 106

[Close]

BLAST of Cucsa.121450 vs. Swiss-Prot
Match: NDBAA_ARATH (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-A OS=Arabidopsis thaliana GN=At1g49140 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 7.4e-44
Identity = 85/107 (79.44%), Postives = 94/107 (87.85%), Query Frame = 1


Query: 1   MGRKKTV-EFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYR 60
           MGRKK + EF+ES PD FDPENPYKDPVAM+EMRE+IVREKWI IEKAKILREK++WCYR
Sbjct: 1   MGRKKGLPEFEESAPDGFDPENPYKDPVAMVEMREHIVREKWIHIEKAKILREKVKWCYR 60

Query: 61  IEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPK---VEPAE 104
           +EGVNH QKCRHLVQQYLD+TRG+GWGKD R  SLHGPK   VE AE
Sbjct: 61  VEGVNHYQKCRHLVQQYLDATRGVGWGKDHRPISLHGPKPVAVEEAE 107

[Close]

BLAST of Cucsa.121450 vs. Swiss-Prot
Match: NDUS6_NEUCR (NADH-ubiquinone oxidoreductase 12 kDa subunit, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo-12.3 PE=3 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 5.0e-08
Identity = 26/64 (40.62%), Postives = 42/64 (65.62%), Query Frame = 1


Query: 14 PDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRIEGVNHLQKCRHLV 73
          P  FD  + Y D   + + ++ I+RE+W+ +   +++RE+L  CY  EGVNHL+KC HL 
Sbjct: 17 PPTFDGVD-YNDTKRLKQAQDAIIREQWVRVMMGRLVREELSKCYYREGVNHLEKCGHLR 76

Query: 74 QQYL 78
          ++YL
Sbjct: 77 ERYL 79

[Close]

BLAST of Cucsa.121450 vs. TrEMBL
Match: A0A0A0LSZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042310 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 5.3e-57
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 1


Query: 1   MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRI 60
           MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRI
Sbjct: 1   MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRI 60

Query: 61  EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVEPAESE 106
           EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVEPAESE
Sbjct: 61  EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVEPAESE 105

[Close]

BLAST of Cucsa.121450 vs. TrEMBL
Match: A0A0L9VGX1_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g021200 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 7.4e-51
Identity = 96/106 (90.57%), Postives = 99/106 (93.40%), Query Frame = 1


Query: 1   MGRKKT-VEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYR 60
           MGRKK  VEFDESPPDDFDP NPYKDPVAMLEMREYIVREKWI IEKAKI+REKLRWCYR
Sbjct: 1   MGRKKGYVEFDESPPDDFDPANPYKDPVAMLEMREYIVREKWIQIEKAKIIREKLRWCYR 60

Query: 61  IEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVEPAESE 106
           IEG+NHLQKCRHLV QYL+STRGIGWGKDGRHPSLH PKVEP ESE
Sbjct: 61  IEGINHLQKCRHLVNQYLESTRGIGWGKDGRHPSLHAPKVEPVESE 106

[Close]

BLAST of Cucsa.121450 vs. TrEMBL
Match: A0A0S3TCA7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G237700 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 7.4e-51
Identity = 96/106 (90.57%), Postives = 99/106 (93.40%), Query Frame = 1


Query: 1   MGRKKT-VEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYR 60
           MGRKK  VEFDESPPDDFDP NPYKDPVAMLEMREYIVREKWI IEKAKI+REKLRWCYR
Sbjct: 1   MGRKKGYVEFDESPPDDFDPANPYKDPVAMLEMREYIVREKWIQIEKAKIIREKLRWCYR 60

Query: 61  IEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVEPAESE 106
           IEG+NHLQKCRHLV QYL+STRGIGWGKDGRHPSLH PKVEP ESE
Sbjct: 61  IEGINHLQKCRHLVNQYLESTRGIGWGKDGRHPSLHAPKVEPVESE 106

[Close]

BLAST of Cucsa.121450 vs. TrEMBL
Match: V7C3Q8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G157200g PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 1.7e-50
Identity = 95/106 (89.62%), Postives = 99/106 (93.40%), Query Frame = 1


Query: 1   MGRKKT-VEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYR 60
           MGRKK  VEFDESPPDDFDP NPYKDPVAMLEMREYIVREKWI IEKAKI+R+KLRWCYR
Sbjct: 1   MGRKKGYVEFDESPPDDFDPANPYKDPVAMLEMREYIVREKWIQIEKAKIIRDKLRWCYR 60

Query: 61  IEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVEPAESE 106
           IEG+NHLQKCRHLV QYL+STRGIGWGKDGRHPSLH PKVEP ESE
Sbjct: 61  IEGINHLQKCRHLVNQYLESTRGIGWGKDGRHPSLHAPKVEPVESE 106

[Close]

BLAST of Cucsa.121450 vs. TrEMBL
Match: C6T2A2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G091500 PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 1.4e-49
Identity = 94/106 (88.68%), Postives = 99/106 (93.40%), Query Frame = 1


Query: 1   MGRKKT-VEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYR 60
           MGRKK  VEF+ESPPDDFDP NPYKDPVAMLEMRE+IVREKWI IEKAKI+REKLRWCYR
Sbjct: 1   MGRKKGYVEFEESPPDDFDPANPYKDPVAMLEMREHIVREKWIQIEKAKIIREKLRWCYR 60

Query: 61  IEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVEPAESE 106
           IEGVNHLQKCRHLV QYL+STRGIGWGKDGRHPSLH PKV+P ESE
Sbjct: 61  IEGVNHLQKCRHLVNQYLESTRGIGWGKDGRHPSLHAPKVDPVESE 106

[Close]

BLAST of Cucsa.121450 vs. TAIR10
Match: AT3G18410.1 (AT3G18410.1 Complex I subunit NDUFS6)

HSP 1 Score: 183.0 bits (463), Expect = 9.9e-47
Identity = 85/106 (80.19%), Postives = 94/106 (88.68%), Query Frame = 1


Query: 1   MGRKKTV-EFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYR 60
           MGRKK + EF+ES PD FDPENPYKDPVAM+EMRE+IVREKWI IEKAKILREK++WCYR
Sbjct: 1   MGRKKGLPEFEESAPDGFDPENPYKDPVAMVEMREHIVREKWIQIEKAKILREKVKWCYR 60

Query: 61  IEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVEPAESE 106
           +EGVNH QKCRHLVQQYLDSTRG+GWGKD R  SLHGPK E  E+E
Sbjct: 61  VEGVNHYQKCRHLVQQYLDSTRGVGWGKDHRPISLHGPKPEAVEAE 106

[Close]

BLAST of Cucsa.121450 vs. TAIR10
Match: AT1G49140.1 (AT1G49140.1 Complex I subunit NDUFS6)

HSP 1 Score: 177.6 bits (449), Expect = 4.2e-45
Identity = 85/107 (79.44%), Postives = 94/107 (87.85%), Query Frame = 1


Query: 1   MGRKKTV-EFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYR 60
           MGRKK + EF+ES PD FDPENPYKDPVAM+EMRE+IVREKWI IEKAKILREK++WCYR
Sbjct: 1   MGRKKGLPEFEESAPDGFDPENPYKDPVAMVEMREHIVREKWIHIEKAKILREKVKWCYR 60

Query: 61  IEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPK---VEPAE 104
           +EGVNH QKCRHLVQQYLD+TRG+GWGKD R  SLHGPK   VE AE
Sbjct: 61  VEGVNHYQKCRHLVQQYLDATRGVGWGKDHRPISLHGPKPVAVEEAE 107

[Close]

BLAST of Cucsa.121450 vs. NCBI nr
Match: gi|449439399|ref|XP_004137473.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 228.0 bits (580), Expect = 7.6e-57
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 1


Query: 1   MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRI 60
           MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRI
Sbjct: 1   MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRI 60

Query: 61  EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVEPAESE 106
           EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVEPAESE
Sbjct: 61  EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVEPAESE 105

[Close]

BLAST of Cucsa.121450 vs. NCBI nr
Match: gi|950935797|ref|XP_014517417.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 208.0 bits (528), Expect = 8.1e-51
Identity = 97/106 (91.51%), Postives = 99/106 (93.40%), Query Frame = 1


Query: 1   MGRKKT-VEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYR 60
           MGRKK  VEFDESPPDDFDP NPYKDPVAMLEMREYIVREKWI IEKAKI+REKLRWCYR
Sbjct: 1   MGRKKGYVEFDESPPDDFDPANPYKDPVAMLEMREYIVREKWIQIEKAKIIREKLRWCYR 60

Query: 61  IEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVEPAESE 106
           IEGVNHLQKCRHLV QYL+STRGIGWGKDGRHPSLH PKVEP ESE
Sbjct: 61  IEGVNHLQKCRHLVNQYLESTRGIGWGKDGRHPSLHAPKVEPVESE 106

[Close]

BLAST of Cucsa.121450 vs. NCBI nr
Match: gi|920714232|gb|KOM54320.1| (hypothetical protein LR48_Vigan10g021200 [Vigna angularis])

HSP 1 Score: 207.6 bits (527), Expect = 1.1e-50
Identity = 96/106 (90.57%), Postives = 99/106 (93.40%), Query Frame = 1


Query: 1   MGRKKT-VEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYR 60
           MGRKK  VEFDESPPDDFDP NPYKDPVAMLEMREYIVREKWI IEKAKI+REKLRWCYR
Sbjct: 1   MGRKKGYVEFDESPPDDFDPANPYKDPVAMLEMREYIVREKWIQIEKAKIIREKLRWCYR 60

Query: 61  IEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVEPAESE 106
           IEG+NHLQKCRHLV QYL+STRGIGWGKDGRHPSLH PKVEP ESE
Sbjct: 61  IEGINHLQKCRHLVNQYLESTRGIGWGKDGRHPSLHAPKVEPVESE 106

[Close]

BLAST of Cucsa.121450 vs. NCBI nr
Match: gi|1012174932|ref|XP_015966683.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 206.8 bits (525), Expect = 1.8e-50
Identity = 97/106 (91.51%), Postives = 99/106 (93.40%), Query Frame = 1


Query: 1   MGRKKT-VEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYR 60
           MGRKK  VEFDESPPDDFDPENPYKDPVA LEMRE+IVREKWI IEKAKI+REKLRWCYR
Sbjct: 1   MGRKKGYVEFDESPPDDFDPENPYKDPVAFLEMREHIVREKWIQIEKAKIIREKLRWCYR 60

Query: 61  IEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVEPAESE 106
           IEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPK E  ESE
Sbjct: 61  IEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKPEAVESE 106

[Close]

BLAST of Cucsa.121450 vs. NCBI nr
Match: gi|502163729|ref|XP_004512930.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 206.8 bits (525), Expect = 1.8e-50
Identity = 95/106 (89.62%), Postives = 101/106 (95.28%), Query Frame = 1


Query: 1   MGRKKT-VEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYR 60
           MGRKK  VEF+ESPPDDFDP NPYKDPVAMLEMRE+IVREKWI IEKAKI+REKLRWCYR
Sbjct: 1   MGRKKGYVEFEESPPDDFDPANPYKDPVAMLEMREHIVREKWIQIEKAKIIREKLRWCYR 60

Query: 61  IEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGPKVEPAESE 106
           IEG+NHLQKCRHLV+QYL+STRGIGWGKDGRHPSLHGPKVEP ESE
Sbjct: 61  IEGINHLQKCRHLVKQYLESTRGIGWGKDGRHPSLHGPKVEPVESE 106

The following BLAST results are available for this feature:

BLAST of Cucsa.121450 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NDBAB_ARATH	1.8e-45	80.19	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B OS=Arabidopsis th...	[more]
NDBAA_ARATH	7.4e-44	79.44	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-A OS=Arabidopsis th...	[more]
NDUS6_NEUCR	5.0e-08	40.63	NADH-ubiquinone oxidoreductase 12 kDa subunit, mitochondrial OS=Neurospora crass...	[more]

BLAST of Cucsa.121450 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSZ4_CUCSA	5.3e-57	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042310 PE=4 SV=1	[more]
A0A0L9VGX1_PHAAN	7.4e-51	90.57	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g021200 PE=4 SV=1	[more]
A0A0S3TCA7_PHAAN	7.4e-51	90.57	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G237700 PE=...	[more]
V7C3Q8_PHAVU	1.7e-50	89.62	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G157200g PE=4 SV=1	[more]
C6T2A2_SOYBN	1.4e-49	88.68	Uncharacterized protein OS=Glycine max GN=GLYMA_07G091500 PE=2 SV=1	[more]

BLAST of Cucsa.121450 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18410.1	9.9e-47	80.19	Complex I subunit NDUFS6	[more]
AT1G49140.1	4.2e-45	79.44	Complex I subunit NDUFS6	[more]

BLAST of Cucsa.121450 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449439399\|ref\|XP_004137473.1\|	7.6e-57	100.00	PREDICTED: NADH dehydrogenase [ubiquinone]	[more]
gi\|950935797\|ref\|XP_014517417.1\|	8.1e-51	91.51	PREDICTED: NADH dehydrogenase [ubiquinone]	[more]
gi\|920714232\|gb\|KOM54320.1\|	1.1e-50	90.57	hypothetical protein LR48_Vigan10g021200 [Vigna angularis]	[more]
gi\|1012174932\|ref\|XP_015966683.1\|	1.8e-50	91.51	PREDICTED: NADH dehydrogenase [ubiquinone]	[more]
gi\|502163729\|ref\|XP_004512930.1\|	1.8e-50	89.62	PREDICTED: NADH dehydrogenase [ubiquinone]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR020163	Complex_I_NDUFS6
IPR020163	Complex_I_NDUFS6
IPR020163	Complex_I_NDUFS6

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
biological_process	GO:0015992	proton transport
biological_process	GO:0006814	sodium ion transport
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.121470.3	Cucsa.121470.3	mRNA
Cucsa.121460.2	Cucsa.121460.2	mRNA
Cucsa.121450.1	Cucsa.121450.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020163	Complex I subunit NDUFS6	PRODOM	PD069254		coord: 25..81 score: 4.0
None	No IPR available	PANTHER	PTHR13094	NADH-UBIQUINONE OXIDOREDUCTASE PDSW SUBUNIT	coord: 1..103 score: 1.7
None	No IPR available	PANTHER	PTHR13094:SF1	NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 10	coord: 1..103 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.121450	Cla018505	Watermelon (97103) v1	cgywmB193
Cucsa.121450	Csa1G042310	Cucumber (Chinese Long) v2	cgycuB159
Cucsa.121450	MELO3C002086	Melon (DHL92) v3.5.1	cgymeB185
Cucsa.121450	ClCG04G011140	Watermelon (Charleston Gray)	cgywcgB190
Cucsa.121450	CSPI01G06750	Wild cucumber (PI 183967)	cgycpiB160
Cucsa.121450	CmaCh13G010260	Cucurbita maxima (Rimu)	cgycmaB0317
Cucsa.121450	CmaCh18G000400	Cucurbita maxima (Rimu)	cgycmaB0318
Cucsa.121450	CmoCh18G000330	Cucurbita moschata (Rifu)	cgycmoB0315
Cucsa.121450	CmoCh13G010670	Cucurbita moschata (Rifu)	cgycmoB0314
Cucsa.121450	Lsi02G001790	Bottle gourd (USVL1VR-Ls)	cgylsiB181
Cucsa.121450	Cp4.1LG09g11400	Cucurbita pepo (Zucchini)	cgycpeB0306
Cucsa.121450	Cp4.1LG20g01190	Cucurbita pepo (Zucchini)	cgycpeB0308
Cucsa.121450	MELO3C002086.2	Melon (DHL92) v3.6.1	cgymedB182
Cucsa.121450	CsaV3_1G006620	Cucumber (Chinese Long) v3	cgycucB163
Cucsa.121450	Cla97C04G078000	Watermelon (97103) v2	cgywmbB186
Cucsa.121450	Bhi08G001019	Wax gourd	cgywgoB218
Cucsa.121450	Carg04811	Silver-seed gourd	carcgyB0452
Cucsa.121450	Carg22752	Silver-seed gourd	carcgyB0589

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.121450	Bottle gourd (USVL1VR-Ls)	cgylsiB182
Cucsa.121450	Watermelon (97103) v2	cgywmbB187
Cucsa.121450	Watermelon (Charleston Gray)	cgywcgB191
Cucsa.121450	Watermelon (97103) v1	cgywmB194