Cucsa.115620 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.115620
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	MYB family protein
Location	scaffold00988 : 215428 .. 216200 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGGCAACCTTGTTGTGACAAACTTGGTGTCAAGAAAGGCCCATGGACTGCTGAAGAAGACAAGAAGCTTGTCACTTTCATCCTCACCTATGGCCATTGTTGTTGGAGGGCTGTTCCCAAGCTCGCCGGCCTCCGACGTTGTGGCAAAAGTTGTCGTCTTCGATGGACTAACTATCTTCGTCCTGACTTGAAACGTGGCCTCCTTGATGAAACTGAAGAACAACTCGTCATTGATCTCCATGCTCATCTTGGTAACAGGTAATTCTCCTATGGTTTAATTTGCTAGGTGTGTGGGCTTTTGTTGTGGGATCTTGGAGAGGAGAGGAAGGATAGAGTGTTTAGAAATATAGAGCGAGACACTAGTTAGTATAATAAGCTTTAGTTCTCGAAGAGATTGCATGTTTCTCGATATAATTACTCTCGAACCAACACTGCACTTCTTTGCTTAAATATCAAATAATTTCATTTATGTTCACAGTTTACTATCTTGTTCGTTTATTCGTTTCGTTTCTAAGGACTGTTTTTGTTGTTTTAGGTGGTCAAAGATTGCGGCGAGATTACCAGGAAGAACCGACAACGAAATAAAGAATCACTGGAACACCCACATCAAGAAGAAGCTAATAAAGATGGGGATAGATCCAGCAACACACCAACCTCTGAAAAAGCAACAAACAGAGAGCAGCAGCCAAGGAAGCTCAACTGATTCCTCAGTAGCCATAACTACTCCATTATCAGAAGCAAATAGCACTACAAAAGAACAGCCATTAA

mRNA sequence

ATGGGAAGGCAACCTTGTTGTGACAAACTTGGTGTCAAGAAAGGCCCATGGACTGCTGAAGAAGACAAGAAGCTTGTCACTTTCATCCTCACCTATGGCCATTGTTGTTGGAGGGCTGTTCCCAAGCTCGCCGGCCTCCGACGTTGTGGCAAAAGTTGTCGTCTTCGATGGACTAACTATCTTCGTCCTGACTTGAAACGTGGCCTCCTTGATGAAACTGAAGAACAACTCGTCATTGATCTCCATGCTCATCTTGGTAACAGGTGGTCAAAGATTGCGGCGAGATTACCAGGAAGAACCGACAACGAAATAAAGAATCACTGGAACACCCACATCAAGAAGAAGCTAATAAAGATGGGGATAGATCCAGCAACACACCAACCTCTGAAAAAGCAACAAACAGAGAGCAGCAGCCAAGGAAGCTCAACTGATTCCTCAGTAGCCATAACTACTCCATTATCAGAAGCAAATAGCACTACAAAAGAACAGCCATTAA

Coding sequence (CDS)

ATGGGAAGGCAACCTTGTTGTGACAAACTTGGTGTCAAGAAAGGCCCATGGACTGCTGAAGAAGACAAGAAGCTTGTCACTTTCATCCTCACCTATGGCCATTGTTGTTGGAGGGCTGTTCCCAAGCTCGCCGGCCTCCGACGTTGTGGCAAAAGTTGTCGTCTTCGATGGACTAACTATCTTCGTCCTGACTTGAAACGTGGCCTCCTTGATGAAACTGAAGAACAACTCGTCATTGATCTCCATGCTCATCTTGGTAACAGGTGGTCAAAGATTGCGGCGAGATTACCAGGAAGAACCGACAACGAAATAAAGAATCACTGGAACACCCACATCAAGAAGAAGCTAATAAAGATGGGGATAGATCCAGCAACACACCAACCTCTGAAAAAGCAACAAACAGAGAGCAGCAGCCAAGGAAGCTCAACTGATTCCTCAGTAGCCATAACTACTCCATTATCAGAAGCAAATAGCACTACAAAAGAACAGCCATTAA

Protein sequence

MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMGIDPATHQPLKKQQTESSSQGSSTDSSVAITTPLSEANSTTKEQPLX

Homology

[Close]

BLAST of Cucsa.115620 vs. Swiss-Prot
Match: ODO1_PETHY (Protein ODORANT1 OS=Petunia hybrida GN=ODO1 PE=2 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 4.2e-70
Identity = 119/146 (81.51%), Postives = 131/146 (89.73%), Query Frame = 1


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTAEEDKKL++FILT G CCWRAVPKLAGL+RCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTAEEDKKLISFILTNGQCCWRAVPKLAGLKRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL + EE+LVIDLH+ LGNRWSKIAARLPGRTDNEIKNHWNTHIKKKL+KMG
Sbjct: 61  LRPDLKRGLLSDAEEKLVIDLHSRLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKMG 120

Query: 121 IDPATHQPLKKQQTESSSQGSSTDSS 147
           IDP TH+PLKK+   S    + +D +
Sbjct: 121 IDPVTHEPLKKEANLSDQPTTESDQN 146

[Close]

BLAST of Cucsa.115620 vs. Swiss-Prot
Match: MYB2_PHYPA (Myb-related protein Pp2 OS=Physcomitrella patens subsp. patens GN=PP2 PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.2e-56
Identity = 100/166 (60.24%), Postives = 126/166 (75.90%), Query Frame = 1


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGR+PCC+K+G+++GPWT+EED+KLV+ I   G  CWRA+PKLAGL RCGKSCRLRWTNY
Sbjct: 1   MGRKPCCEKVGLRRGPWTSEEDQKLVSHITNNGLSCWRAIPKLAGLLRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRG+  E EE L++DLHA LGNRWS+IAA+LPGRTDNEIKN+WNT +KK+L   G
Sbjct: 61  LRPDLKRGIFSEAEENLILDLHATLGNRWSRIAAQLPGRTDNEIKNYWNTRLKKRLRSQG 120

Query: 121 IDPATHQPL---KKQQTESSSQGSSTDSSVAITTPLSEANSTTKEQ 164
           +DP TH PL   K   TE  +     DSS    +  S++   +K++
Sbjct: 121 LDPNTHLPLEDSKLDDTEDDTDDEGGDSSDVTMSDASKSEKRSKKK 166

[Close]

BLAST of Cucsa.115620 vs. Swiss-Prot
Match: MYB15_ANTMA (Myb-related protein 315 OS=Antirrhinum majus GN=MYB315 PE=2 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.4e-51
Identity = 95/160 (59.38%), Postives = 117/160 (73.12%), Query Frame = 1


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           M RQPC +K G+K+GPWT EED+KL +++L  G   WR +PKLAGL RCGKSCRLRW NY
Sbjct: 1   MERQPCREKFGLKRGPWTEEEDQKLTSYVLKNGIQGWRVIPKLAGLSRCGKSCRLRWMNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLK+G L E EE  +I+LHAHLGNRWSKIA  +PGRTDNEIKN+WNTHIKKKL  +G
Sbjct: 61  LRPDLKKGPLTEMEENQIIELHAHLGNRWSKIALHIPGRTDNEIKNYWNTHIKKKLKLLG 120

Query: 121 IDPATHQPLK------KQQTESSSQGSSTDSSVAITTPLS 155
           IDP  HQP +      + + ES ++ S++     I   +S
Sbjct: 121 IDPNNHQPFEHKGNVDETKIESDTKESNSQDMKQIVNEVS 160

[Close]

BLAST of Cucsa.115620 vs. Swiss-Prot
Match: MYB32_ARATH (Transcription factor MYB32 OS=Arabidopsis thaliana GN=MYB32 PE=2 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.4e-51
Identity = 88/142 (61.97%), Postives = 110/142 (77.46%), Query Frame = 1


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGR PCC+K    KG WT EED KL+++I  +G  CWR++P+ AGL+RCGKSCRLRW NY
Sbjct: 1   MGRSPCCEKDHTNKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAGLQRCGKSCRLRWINY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRG     E+ L+I LH+ LGN+WS IA RLPGRTDNEIKN+WNTH+K+KL++ G
Sbjct: 61  LRPDLKRGNFTLEEDDLIIKLHSLLGNKWSLIATRLPGRTDNEIKNYWNTHVKRKLLRKG 120

Query: 121 IDPATHQPLKKQQTESSSQGSS 143
           IDPATH+P+ + +T   S  SS
Sbjct: 121 IDPATHRPINETKTSQDSSDSS 142

[Close]

BLAST of Cucsa.115620 vs. Swiss-Prot
Match: MYB4_ARATH (Transcription repressor MYB4 OS=Arabidopsis thaliana GN=MYB4 PE=1 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 9.8e-51
Identity = 88/154 (57.14%), Postives = 113/154 (73.38%), Query Frame = 1


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGR PCC+K    KG WT EED++LV +I  +G  CWR++PK AGL RCGKSCRLRW NY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRG   E E++L+I LH+ LGN+WS IA RLPGRTDNEIKN+WNTHI++KLI  G
Sbjct: 61  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLINRG 120

Query: 121 IDPATHQPLKKQQTESSSQGSSTDSSVAITTPLS 155
           IDP +H+P+++      S+ +  +   + T  +S
Sbjct: 121 IDPTSHRPIQESSASQDSKPTQLEPVTSNTINIS 154

[Close]

BLAST of Cucsa.115620 vs. TrEMBL
Match: W9QU23_9ROSA (Protein ODORANT1 OS=Morus notabilis GN=L484_018994 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 9.1e-72
Identity = 126/160 (78.75%), Postives = 136/160 (85.00%), Query Frame = 1


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTAEEDKKL+ FILT GHCCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTAEEDKKLINFILTNGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL E EEQLVIDLHA LGNRWSKIA+RLPGRTDNEIKNHWNTHIKKKL+KMG
Sbjct: 61  LRPDLKRGLLTEAEEQLVIDLHARLGNRWSKIASRLPGRTDNEIKNHWNTHIKKKLVKMG 120

Query: 121 IDPATHQPLKKQQTESSSQGSSTDSSVAITTPLSEANSTT 161
           IDP TH+PL K+  +     +        TTP+ + NST+
Sbjct: 121 IDPVTHEPLHKENVDDQLPSNKKTILETTTTPVQDVNSTS 160

[Close]

BLAST of Cucsa.115620 vs. TrEMBL
Match: W9RQ26_9ROSA (Protein ODORANT1 OS=Morus notabilis GN=L484_000942 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.2e-71
Identity = 131/165 (79.39%), Postives = 142/165 (86.06%), Query Frame = 1


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTAEEDKKLV FILT+G CCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVNFILTHGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL+E EEQLVIDLHAHLGNRWSKIAA+LPGRTDNEIKNHWNTHIKKKLIKMG
Sbjct: 61  LRPDLKRGLLNEAEEQLVIDLHAHLGNRWSKIAAKLPGRTDNEIKNHWNTHIKKKLIKMG 120

Query: 121 IDPATHQPLKKQQTESSSQGSSTDSSVAITTPLSEANSTTKEQPL 166
           IDP TH+PL  Q+ + SS  +ST           EANS++ +Q +
Sbjct: 121 IDPVTHEPLNGQKDKYSSTSTSTPQD--DDQKPCEANSSSNQQEM 163

[Close]

BLAST of Cucsa.115620 vs. TrEMBL
Match: A0A0J8CKL4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g098220 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 7.7e-71
Identity = 129/171 (75.44%), Postives = 143/171 (83.63%), Query Frame = 1


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTAEEDKKL+ FILT G CCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL ++EEQLVIDLHA LGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG
Sbjct: 61  LRPDLKRGLLSDSEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120

Query: 121 IDPATHQPLKKQQT---------ESSSQGSSTDSSVAITTPLSEANSTTKE 163
           IDP TH+PL K Q+          SSS  ++ +S ++    L++A S++ E
Sbjct: 121 IDPITHEPLNKDQSPNNQIIPNQSSSSSNNNNNSDISTAESLNQAQSSSLE 171

[Close]

BLAST of Cucsa.115620 vs. TrEMBL
Match: A0A059CIE2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02014 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.3e-70
Identity = 127/162 (78.40%), Postives = 134/162 (82.72%), Query Frame = 1


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDK GVKKGPWTAEEDKKL+ FILT GHCCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKSGVKKGPWTAEEDKKLINFILTNGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL E EEQLVIDLHA LGNRWSKIAARLPGRTDNEIKNHWNTHIKKKL+KMG
Sbjct: 61  LRPDLKRGLLSEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKMG 120

Query: 121 IDPATHQPLKKQQTESSSQGSSTDSSVAITTPLSEANSTTKE 163
           IDP TH+PL K Q   S        S +   P SE+ + T +
Sbjct: 121 IDPVTHEPLNKPQKTPSEHDPEASLSSSQADPTSESPANTHQ 162

[Close]

BLAST of Cucsa.115620 vs. TrEMBL
Match: A0A0A0KMT4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G160120 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.3e-70
Identity = 130/170 (76.47%), Postives = 142/170 (83.53%), Query Frame = 1


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTA+EDKKL+ FILT G CCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTADEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL +TEEQLVIDLHA LGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG
Sbjct: 61  LRPDLKRGLLTDTEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120

Query: 121 IDPATHQPLKKQQTESSSQGSST--------DSSVAITTPLSEANSTTKE 163
           IDP TH+P++KQ     +Q S+T        DSS +  T  + ++ TT E
Sbjct: 121 IDPVTHEPIQKQPENEKNQSSNTKTENNTVLDSSSSPPTMENSSSVTTDE 170

[Close]

BLAST of Cucsa.115620 vs. TAIR10
Match: AT4G22680.1 (AT4G22680.1 myb domain protein 85)

HSP 1 Score: 263.8 bits (673), Expect = 6.9e-71
Identity = 124/179 (69.27%), Postives = 144/179 (80.45%), Query Frame = 1


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWT EEDKKL+ FILT GHCCWRA+PKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTVEEDKKLINFILTNGHCCWRALPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL   EEQLVIDLHA+LGN+WSKIA+RLPGRTDNEIKNHWNTHIKKKL+KMG
Sbjct: 61  LRPDLKRGLLSHDEEQLVIDLHANLGNKWSKIASRLPGRTDNEIKNHWNTHIKKKLLKMG 120

Query: 121 IDPATHQPLKKQQT-------------ESSSQGSSTDS---SVAITTPLSEANSTTKEQ 164
           IDP THQPL ++ +             + S +  +T++    +++TT   E++ST  +Q
Sbjct: 121 IDPMTHQPLNQEPSNIDNSKTIPSNPDDVSVEPKTTNTKYVEISVTTTEEESSSTVTDQ 179

[Close]

BLAST of Cucsa.115620 vs. TAIR10
Match: AT4G12350.1 (AT4G12350.1 myb domain protein 42)

HSP 1 Score: 263.8 bits (673), Expect = 6.9e-71
Identity = 123/148 (83.11%), Postives = 131/148 (88.51%), Query Frame = 1


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKL VKKGPWTAEEDKKL+ FILT GHCCWRA+PKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLMVKKGPWTAEEDKKLINFILTNGHCCWRALPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL + EEQLVIDLHA LGNRWSKIAARLPGRTDNEIKNHWNTHIKKKL+KM 
Sbjct: 61  LRPDLKRGLLSDAEEQLVIDLHALLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKME 120

Query: 121 IDPATHQPLKKQQTESSSQGSSTDSSVA 149
           IDP+THQPL K  T+++    S  SS A
Sbjct: 121 IDPSTHQPLNKVFTDTNLVDKSETSSKA 148

[Close]

BLAST of Cucsa.115620 vs. TAIR10
Match: AT5G16600.1 (AT5G16600.1 myb domain protein 43)

HSP 1 Score: 251.5 bits (641), Expect = 3.6e-67
Identity = 112/140 (80.00%), Postives = 123/140 (87.86%), Query Frame = 1


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDK+G+KKGPWT EEDKKL+ FILT GHCCWRA+PKL+GL RCGKSCRLRW NY
Sbjct: 1   MGRQPCCDKVGLKKGPWTIEEDKKLINFILTNGHCCWRALPKLSGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL E EEQ VI+LHA LGNRWSKIA+ LPGRTDNEIKNHWNTHIKKKL KMG
Sbjct: 61  LRPDLKRGLLSEYEEQKVINLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120

Query: 121 IDPATHQPLKKQQTESSSQG 141
           IDP TH+PL +Q+    +QG
Sbjct: 121 IDPLTHKPLSEQEASQQAQG 140

[Close]

BLAST of Cucsa.115620 vs. TAIR10
Match: AT1G66230.1 (AT1G66230.1 myb domain protein 20)

HSP 1 Score: 246.9 bits (629), Expect = 8.7e-66
Identity = 116/165 (70.30%), Postives = 131/165 (79.39%), Query Frame = 1


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDK+G+KKGPWTAEED+KL+ FILT G CCWRAVPKL+GL RCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKVGLKKGPWTAEEDRKLINFILTNGQCCWRAVPKLSGLLRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL + EE++VIDLH+ LGNRWSKIA+ LPGRTDNEIKNHWNTHIKKKL KMG
Sbjct: 61  LRPDLKRGLLSDYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120

Query: 121 IDPATHQPLKKQQTESSSQGSSTDSSVAITTPLSEANSTTKEQPL 166
           IDP TH+PL   + E         ++   T P  E    T E+PL
Sbjct: 121 IDPLTHKPLSIVEKEDEEPLKKLQNN---TVPFQE----TMERPL 158

[Close]

BLAST of Cucsa.115620 vs. TAIR10
Match: AT5G62320.1 (AT5G62320.1 myb domain protein 99)

HSP 1 Score: 219.2 bits (557), Expect = 2.0e-57
Identity = 104/162 (64.20%), Postives = 119/162 (73.46%), Query Frame = 1


Query: 2   GRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHC-------CWRAVPKLAGLRRCGKSCR 61
           GR+PCCD++G++KGPWT EED KLV F+   G+C       CWR VPKLAGLRRCGKSCR
Sbjct: 3   GRKPCCDEVGLRKGPWTVEEDGKLVDFLRARGNCGGGGGGWCWRDVPKLAGLRRCGKSCR 62

Query: 62  LRWTNYLRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKK 121
           LRWTNYLRPDLKRGL  E E QLVIDLHA LGNRWSKIA  LPGRTDN+IKN+WNTHIK+
Sbjct: 63  LRWTNYLRPDLKRGLFTEEEIQLVIDLHARLGNRWSKIAVELPGRTDNDIKNYWNTHIKR 122

Query: 122 KLIKMGIDPATHQPLKKQQTESSSQGSSTDSSVAITTPLSEA 157
           KLI+MGIDP TH+   +Q+          D      T +S A
Sbjct: 123 KLIRMGIDPNTHRRFDQQKVNEEETILVNDPKPLSETEVSVA 164

[Close]

BLAST of Cucsa.115620 vs. NCBI nr
Match: gi|449451932|ref|XP_004143714.1| (PREDICTED: protein ODORANT1 [Cucumis sativus])

HSP 1 Score: 349.0 bits (894), Expect = 4.6e-93
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 1


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG
Sbjct: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120

Query: 121 IDPATHQPLKKQQTESSSQGSSTDSSVAITTPLSEANSTTKEQPL 166
           IDPATHQPLKKQQTESSSQGSSTDSSVAITTPLSEANSTTKEQPL
Sbjct: 121 IDPATHQPLKKQQTESSSQGSSTDSSVAITTPLSEANSTTKEQPL 165

[Close]

BLAST of Cucsa.115620 vs. NCBI nr
Match: gi|659073120|ref|XP_008467265.1| (PREDICTED: protein ODORANT1 [Cucumis melo])

HSP 1 Score: 342.4 bits (877), Expect = 4.3e-91
Identity = 161/165 (97.58%), Postives = 162/165 (98.18%), Query Frame = 1


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAA+LPGRTDNEIKNHWNTHIKKKLIKMG
Sbjct: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAAKLPGRTDNEIKNHWNTHIKKKLIKMG 120

Query: 121 IDPATHQPLKKQQTESSSQGSSTDSSVAITTPLSEANSTTKEQPL 166
           IDP THQPLKKQQTESSSQGSSTDSSVAITTPLSEANS  KEQPL
Sbjct: 121 IDPVTHQPLKKQQTESSSQGSSTDSSVAITTPLSEANSNAKEQPL 165

[Close]

BLAST of Cucsa.115620 vs. NCBI nr
Match: gi|703088904|ref|XP_010093656.1| (Protein ODORANT1 [Morus notabilis])

HSP 1 Score: 277.7 bits (709), Expect = 1.3e-71
Identity = 126/160 (78.75%), Postives = 136/160 (85.00%), Query Frame = 1


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTAEEDKKL+ FILT GHCCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTAEEDKKLINFILTNGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL E EEQLVIDLHA LGNRWSKIA+RLPGRTDNEIKNHWNTHIKKKL+KMG
Sbjct: 61  LRPDLKRGLLTEAEEQLVIDLHARLGNRWSKIASRLPGRTDNEIKNHWNTHIKKKLVKMG 120

Query: 121 IDPATHQPLKKQQTESSSQGSSTDSSVAITTPLSEANSTT 161
           IDP TH+PL K+  +     +        TTP+ + NST+
Sbjct: 121 IDPVTHEPLHKENVDDQLPSNKKTILETTTTPVQDVNSTS 160

[Close]

BLAST of Cucsa.115620 vs. NCBI nr
Match: gi|703116286|ref|XP_010101097.1| (Protein ODORANT1 [Morus notabilis])

HSP 1 Score: 277.3 bits (708), Expect = 1.7e-71
Identity = 131/165 (79.39%), Postives = 142/165 (86.06%), Query Frame = 1


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTAEEDKKLV FILT+G CCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVNFILTHGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL+E EEQLVIDLHAHLGNRWSKIAA+LPGRTDNEIKNHWNTHIKKKLIKMG
Sbjct: 61  LRPDLKRGLLNEAEEQLVIDLHAHLGNRWSKIAAKLPGRTDNEIKNHWNTHIKKKLIKMG 120

Query: 121 IDPATHQPLKKQQTESSSQGSSTDSSVAITTPLSEANSTTKEQPL 166
           IDP TH+PL  Q+ + SS  +ST           EANS++ +Q +
Sbjct: 121 IDPVTHEPLNGQKDKYSSTSTSTPQD--DDQKPCEANSSSNQQEM 163

[Close]

BLAST of Cucsa.115620 vs. NCBI nr
Match: gi|731330579|ref|XP_010676207.1| (PREDICTED: protein ODORANT1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 274.6 bits (701), Expect = 1.1e-70
Identity = 129/171 (75.44%), Postives = 143/171 (83.63%), Query Frame = 1


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTAEEDKKL+ FILT G CCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL ++EEQLVIDLHA LGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG
Sbjct: 61  LRPDLKRGLLSDSEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120

Query: 121 IDPATHQPLKKQQT---------ESSSQGSSTDSSVAITTPLSEANSTTKE 163
           IDP TH+PL K Q+          SSS  ++ +S ++    L++A S++ E
Sbjct: 121 IDPITHEPLNKDQSPNNQIIPNQSSSSSNNNNNSDISTAESLNQAQSSSLE 171

The following BLAST results are available for this feature:

BLAST of Cucsa.115620 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ODO1_PETHY	4.2e-70	81.51	Protein ODORANT1 OS=Petunia hybrida GN=ODO1 PE=2 SV=1	[more]
MYB2_PHYPA	1.2e-56	60.24	Myb-related protein Pp2 OS=Physcomitrella patens subsp. patens GN=PP2 PE=2 SV=1	[more]
MYB15_ANTMA	3.4e-51	59.38	Myb-related protein 315 OS=Antirrhinum majus GN=MYB315 PE=2 SV=1	[more]
MYB32_ARATH	3.4e-51	61.97	Transcription factor MYB32 OS=Arabidopsis thaliana GN=MYB32 PE=2 SV=1	[more]
MYB4_ARATH	9.8e-51	57.14	Transcription repressor MYB4 OS=Arabidopsis thaliana GN=MYB4 PE=1 SV=1	[more]

BLAST of Cucsa.115620 vs. TrEMBL


Match Name	E-value	Identity	Description
W9QU23_9ROSA	9.1e-72	78.75	Protein ODORANT1 OS=Morus notabilis GN=L484_018994 PE=4 SV=1	[more]
W9RQ26_9ROSA	1.2e-71	79.39	Protein ODORANT1 OS=Morus notabilis GN=L484_000942 PE=4 SV=1	[more]
A0A0J8CKL4_BETVU	7.7e-71	75.44	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g098220 PE=4 S...	[more]
A0A059CIE2_EUCGR	1.3e-70	78.40	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02014 PE=4 SV=1	[more]
A0A0A0KMT4_CUCSA	1.3e-70	76.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G160120 PE=4 SV=1	[more]

BLAST of Cucsa.115620 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G22680.1	6.9e-71	69.27	myb domain protein 85	[more]
AT4G12350.1	6.9e-71	83.11	myb domain protein 42	[more]
AT5G16600.1	3.6e-67	80.00	myb domain protein 43	[more]
AT1G66230.1	8.7e-66	70.30	myb domain protein 20	[more]
AT5G62320.1	2.0e-57	64.20	myb domain protein 99	[more]

BLAST of Cucsa.115620 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449451932\|ref\|XP_004143714.1\|	4.6e-93	100.00	PREDICTED: protein ODORANT1 [Cucumis sativus]	[more]
gi\|659073120\|ref\|XP_008467265.1\|	4.3e-91	97.58	PREDICTED: protein ODORANT1 [Cucumis melo]	[more]
gi\|703088904\|ref\|XP_010093656.1\|	1.3e-71	78.75	Protein ODORANT1 [Morus notabilis]	[more]
gi\|703116286\|ref\|XP_010101097.1\|	1.7e-71	79.39	Protein ODORANT1 [Morus notabilis]	[more]
gi\|731330579\|ref\|XP_010676207.1\|	1.1e-70	75.44	PREDICTED: protein ODORANT1-like [Beta vulgaris subsp. vulgaris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.115620.1	Cucsa.115620.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 72..111 score: 1.7E-14coord: 14..61 score: 2.9
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 13..63 score: 2.2E-13coord: 66..114 score: 8.9
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 5..62 score: 1.8E-22coord: 63..117 score: 2.7
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 11..108 score: 1.35
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 62..116 score: 27.142coord: 9..61 score: 14
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 1..145 score: 8.9E
None	No IPR available	PANTHER	PTHR10641:SF674	MYB DOMAIN PROTEIN 42	coord: 1..145 score: 8.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.115620	Cla003566	Watermelon (97103) v1	cgywmB171
Cucsa.115620	Csa5G171680	Cucumber (Chinese Long) v2	cgycuB147
Cucsa.115620	MELO3C005406	Melon (DHL92) v3.5.1	cgymeB167
Cucsa.115620	ClCG01G005200	Watermelon (Charleston Gray)	cgywcgB170
Cucsa.115620	CSPI05G08080	Wild cucumber (PI 183967)	cgycpiB148
Cucsa.115620	CmaCh15G013880	Cucurbita maxima (Rimu)	cgycmaB0281
Cucsa.115620	CmoCh15G014530	Cucurbita moschata (Rifu)	cgycmoB0277
Cucsa.115620	MELO3C005406.2	Melon (DHL92) v3.6.1	cgymedB166
Cucsa.115620	CsaV3_5G005480	Cucumber (Chinese Long) v3	cgycucB153
Cucsa.115620	Cla97C01G005430	Watermelon (97103) v2	cgywmbB166
Cucsa.115620	Bhi12G000518	Wax gourd	cgywgoB194
Cucsa.115620	Carg20791	Silver-seed gourd	carcgyB0830

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.115620	Silver-seed gourd	carcgyB0795
Cucsa.115620	Cucurbita maxima (Rimu)	cgycmaB0282
Cucsa.115620	Cucurbita moschata (Rifu)	cgycmoB0278
Cucsa.115620	Cucurbita pepo (Zucchini)	cgycpeB0271
Cucsa.115620	Cucurbita pepo (Zucchini)	cgycpeB0272
Cucsa.115620	Bottle gourd (USVL1VR-Ls)	cgylsiB162