CsaV3_5G005480 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_5G005480
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	MYB transcription factor
Location	chr5 : 3543072 .. 3544449 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGGTGCTTTTTGGGGTCACACTTAGAACTTGAGAGAGTTTTTCAACTTAAGGCTCTCTCTATATACTTTTGGAGTTTGTAAAAGTGATGGGAAGGCAACCTTGTTGTGACAAACTTGGTGTCAAGAAAGGCCCATGGACTGCTGAAGAAGACAAGAAGCTTGTCACTTTCATCCTCACCTATGGCCATTGTTGTTGGAGGGCTGTTCCCAAGCTCGCCGGCCTCCGACGTTGTGGCAAAAGTTGTCGTCTTCGATGGACTAACTATCTTCGTCCTGACTTGAAACGTGGCCTCCTTGATGAAACTGAAGAACAACTCGTCATTGATCTCCATGCTCATCTTGGTAACAGGTAATTCTCCTATGGTTTAATTTGCTAGGTGTGTGGGCTTTTGTTGTGGGATCTTGGAGAGGAGAGGAAGGATAGAGTGTTTAGAAATATAGAGCGAGACACTAGTTAGTATAATAAGCTTTAGTTCTCGAAGAGATTGCATGTTTCTCGATATAATTACTCTCGAACCAACACTGCACTTCTTTGCTTAAATATCAAATAATTTCATTTATGTTCACAGTTTACTATCTTGTTCGTTTATTCGTTTCGTTTCTAAGGACTGTTTTTGTTGTTTTAGGTGGTCAAAGATTGCGGCGAGATTACCAGGAAGAACCGACAACGAAATAAAGAATCACTGGAACACCCACATCAAGAAGAAGCTAATAAAGATGGGGATAGATCCAGCAACACACCAACCTCTGAAAAAGCAACAAACAGAGAGCAGCAGCCAAGGAAGCTCAACTGATTCCTCAGTAGCCATAACTACTCCATTATCAGAAGCAAATAGCACTACAAAAGAACAGCCATTAAGCAGCCATATTTGGATGGAAGCTCTTGAAGATGAATCATGGTGGAATTTCCCAACATGGGGAAGTGAAATCTACAGTGATTTTGGATTATATTCTTCAGAGGATAGCTTGAATCGGTTGTTGGATTACTACAAAGAGCTTGGAGATGAGGATTTTGAGTTGAGTTCTTTGGGGGACTTTAACAAACATTTGGTGAGCATTGCAGAAAAAAACTGATGAAAATATTTCAACATTTCACTTGATCAGTTCATACTCATCTAATTAATCTAATTAAATCATAAAGATTATTGGGAAATTAAGAGATTGTTATTTGTTTAGAAAATGTTTAAGAACTTATTTAATTTCTTCTTCTTTTTCTTTTTTCTGAGATTTGGATTGATGTTAACAATATGGTTGGATATGTGTAAATGTAAATAGAAGAATCCTTCAATGAAATTAATGAATAATACAAAGGGCATTGATAATAATAGTGAAAAAAAAAAATGAAGAGTCAATTCAAATTTGATAAGACTATTCAT

mRNA sequence

ATGGGAAGGCAACCTTGTTGTGACAAACTTGGTGTCAAGAAAGGCCCATGGACTGCTGAAGAAGACAAGAAGCTTGTCACTTTCATCCTCACCTATGGCCATTGTTGTTGGAGGGCTGTTCCCAAGCTCGCCGGCCTCCGACGTTGTGGCAAAAGTTGTCGTCTTCGATGGACTAACTATCTTCGTCCTGACTTGAAACGTGGCCTCCTTGATGAAACTGAAGAACAACTCGTCATTGATCTCCATGCTCATCTTGGTAACAGGTGGTCAAAGATTGCGGCGAGATTACCAGGAAGAACCGACAACGAAATAAAGAATCACTGGAACACCCACATCAAGAAGAAGCTAATAAAGATGGGGATAGATCCAGCAACACACCAACCTCTGAAAAAGCAACAAACAGAGAGCAGCAGCCAAGGAAGCTCAACTGATTCCTCAGTAGCCATAACTACTCCATTATCAGAAGCAAATAGCACTACAAAAGAACAGCCATTAAGCAGCCATATTTGGATGGAAGCTCTTGAAGATGAATCATGGTGGAATTTCCCAACATGGGGAAGTGAAATCTACAGTGATTTTGGATTATATTCTTCAGAGGATAGCTTGAATCGGTTGTTGGATTACTACAAAGAGCTTGGAGATGAGGATTTTGAGTTGAGTTCTTTGGGGGACTTTAACAAACATTTGGTGAGCATTGCAGAAAAAAACTGA

Coding sequence (CDS)

ATGGGAAGGCAACCTTGTTGTGACAAACTTGGTGTCAAGAAAGGCCCATGGACTGCTGAAGAAGACAAGAAGCTTGTCACTTTCATCCTCACCTATGGCCATTGTTGTTGGAGGGCTGTTCCCAAGCTCGCCGGCCTCCGACGTTGTGGCAAAAGTTGTCGTCTTCGATGGACTAACTATCTTCGTCCTGACTTGAAACGTGGCCTCCTTGATGAAACTGAAGAACAACTCGTCATTGATCTCCATGCTCATCTTGGTAACAGGTGGTCAAAGATTGCGGCGAGATTACCAGGAAGAACCGACAACGAAATAAAGAATCACTGGAACACCCACATCAAGAAGAAGCTAATAAAGATGGGGATAGATCCAGCAACACACCAACCTCTGAAAAAGCAACAAACAGAGAGCAGCAGCCAAGGAAGCTCAACTGATTCCTCAGTAGCCATAACTACTCCATTATCAGAAGCAAATAGCACTACAAAAGAACAGCCATTAAGCAGCCATATTTGGATGGAAGCTCTTGAAGATGAATCATGGTGGAATTTCCCAACATGGGGAAGTGAAATCTACAGTGATTTTGGATTATATTCTTCAGAGGATAGCTTGAATCGGTTGTTGGATTACTACAAAGAGCTTGGAGATGAGGATTTTGAGTTGAGTTCTTTGGGGGACTTTAACAAACATTTGGTGAGCATTGCAGAAAAAAACTGA

Protein sequence

MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMGIDPATHQPLKKQQTESSSQGSSTDSSVAITTPLSEANSTTKEQPLSSHIWMEALEDESWWNFPTWGSEIYSDFGLYSSEDSLNRLLDYYKELGDEDFELSSLGDFNKHLVSIAEKN

Homology

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BLAST of CsaV3_5G005480 vs. NCBI nr
Match: XP_004143714.1 (PREDICTED: protein ODORANT1 [Cucumis sativus])

HSP 1 Score: 495.4 bits (1274), Expect = 1.1e-136
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG
Sbjct: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120

Query: 121 IDPATHQPLKKQQTESSSQGSSTDSSVAITTPLSEANSTTKEQPLSSHIWMEALEDESWW 180
           IDPATHQPLKKQQTESSSQGSSTDSSVAITTPLSEANSTTKEQPLSSHIWMEALEDESWW
Sbjct: 121 IDPATHQPLKKQQTESSSQGSSTDSSVAITTPLSEANSTTKEQPLSSHIWMEALEDESWW 180

Query: 181 NFPTWGSEIYSDFGLYSSEDSLNRLLDYYKELGDEDFELSSLGDFNKHLVSIAEKN 237
           NFPTWGSEIYSDFGLYSSEDSLNRLLDYYKELGDEDFELSSLGDFNKHLVSIAEKN
Sbjct: 181 NFPTWGSEIYSDFGLYSSEDSLNRLLDYYKELGDEDFELSSLGDFNKHLVSIAEKN 236

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BLAST of CsaV3_5G005480 vs. NCBI nr
Match: XP_008467265.1 (PREDICTED: protein ODORANT1 [Cucumis melo])

HSP 1 Score: 470.3 bits (1209), Expect = 3.8e-129
Identity = 226/237 (95.36%), Postives = 231/237 (97.47%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAA+LPGRTDNEIKNHWNTHIKKKLIKMG
Sbjct: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAAKLPGRTDNEIKNHWNTHIKKKLIKMG 120

Query: 121 IDPATHQPLKKQQTESSSQGSSTDSSVAITTPLSEANSTTKEQPLSSHIWMEAL-EDESW 180
           IDP THQPLKKQQTESSSQGSSTDSSVAITTPLSEANS  KEQPLS+HIWMEAL +DESW
Sbjct: 121 IDPVTHQPLKKQQTESSSQGSSTDSSVAITTPLSEANSNAKEQPLSNHIWMEALDQDESW 180

Query: 181 WNFPTWGSEIYSDFGLYSSEDSLNRLLDYYKELGDEDFELSSLGDFNKHLVSIAEKN 237
           WNFPTWG+EIYSDFGLYSSEDSLNRLLDYYKELGDEDFELSSLGDFN+ LV IAEKN
Sbjct: 181 WNFPTWGTEIYSDFGLYSSEDSLNRLLDYYKELGDEDFELSSLGDFNR-LVGIAEKN 236

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BLAST of CsaV3_5G005480 vs. NCBI nr
Match: XP_022928784.1 (protein ODORANT1-like [Cucurbita moschata] >XP_022970227.1 protein ODORANT1-like [Cucurbita maxima])

HSP 1 Score: 408.3 bits (1048), Expect = 1.8e-110
Identity = 194/236 (82.20%), Postives = 209/236 (88.56%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTAEED KL TFIL+YG CCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTAEEDNKLFTFILSYGPCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLLDE EEQLVIDLHA LGNRWSKIAA LPGRTDNEIKNHWNTHIKKKLIKMG
Sbjct: 61  LRPDLKRGLLDEAEEQLVIDLHARLGNRWSKIAAGLPGRTDNEIKNHWNTHIKKKLIKMG 120

Query: 121 IDPATHQPLKKQQTESSSQGSSTDSSVAITTPLSEANSTTKEQPLSSHIWMEALEDESWW 180
           IDP THQPL+K QTESSSQGSSTDSS A  +PLSE N   K+QPL+S IWMEAL+D+SW 
Sbjct: 121 IDPVTHQPLQKPQTESSSQGSSTDSSSAAISPLSEPNFPAKDQPLTSQIWMEALQDDSWS 180

Query: 181 NFPTWGSEIYSDFGLYSSEDSLNRLLDYYKELGDEDFELSSLGDFNKHLVSIAEKN 237
           NF TWGSE Y+DFG +SSEDSLN+LLDYYK+LGD+D EL S G+FNK L  + EK+
Sbjct: 181 NFSTWGSESYTDFGPHSSEDSLNQLLDYYKDLGDKDCELGSSGNFNKQLAGMGEKD 236

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BLAST of CsaV3_5G005480 vs. NCBI nr
Match: XP_023550973.1 (protein ODORANT1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 406.8 bits (1044), Expect = 5.2e-110
Identity = 193/236 (81.78%), Postives = 209/236 (88.56%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTAEED KL TFIL+YG CCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTAEEDNKLFTFILSYGPCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLLDE EEQLVIDLHAHLGNRWSKIAA LPGRTDNEIKN+WNTHIKKKLIKMG
Sbjct: 61  LRPDLKRGLLDEAEEQLVIDLHAHLGNRWSKIAAGLPGRTDNEIKNYWNTHIKKKLIKMG 120

Query: 121 IDPATHQPLKKQQTESSSQGSSTDSSVAITTPLSEANSTTKEQPLSSHIWMEALEDESWW 180
           IDP THQPL+K QTESSSQGSSTDSS A  +PLSE N   K+QPL+S IWMEAL+D SW 
Sbjct: 121 IDPVTHQPLQKPQTESSSQGSSTDSSSAAISPLSEPNFPAKDQPLTSQIWMEALQDASWS 180

Query: 181 NFPTWGSEIYSDFGLYSSEDSLNRLLDYYKELGDEDFELSSLGDFNKHLVSIAEKN 237
           NF TWG+E Y+DFG +SSEDSLN+LLDYYK+LGD+D EL S G+FNK L  + EK+
Sbjct: 181 NFSTWGTESYTDFGPHSSEDSLNQLLDYYKDLGDKDCELGSSGNFNKQLAGMGEKD 236

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BLAST of CsaV3_5G005480 vs. NCBI nr
Match: XP_022159685.1 (protein ODORANT1-like [Momordica charantia])

HSP 1 Score: 384.8 bits (987), Expect = 2.1e-103
Identity = 183/232 (78.88%), Postives = 199/232 (85.78%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDK+GVKKGPWTAEED KLVTFILTYGHCCWRA+PKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKIGVKKGPWTAEEDNKLVTFILTYGHCCWRALPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLLD+ EEQLVIDLHA LGNRWSKIAARLPGRTDNEIKN+WNTHIKKKLIKMG
Sbjct: 61  LRPDLKRGLLDDAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNYWNTHIKKKLIKMG 120

Query: 121 IDPATHQPLKKQQTESSSQGSSTDSSVAITTPLSEANSTTKEQPLSSHIWMEALEDESWW 180
           +DP THQPL+KQ + S            I++ LSEAN   K+Q L+SH+W+E L D+ W 
Sbjct: 121 MDPVTHQPLQKQPSCSXXXXXXXXXXXXISS-LSEANFAGKDQALTSHMWVETLRDDPWL 180

Query: 181 NFPTWGSEIYSDFGLYSSEDSLNRLLDYYKELGDEDFELSSLGDFNKHLVSI 233
           NFPTWGSEI SDFG YSSEDSLNRLLDYYKELGDEDFE  SLGDF+K LV +
Sbjct: 181 NFPTWGSEINSDFGSYSSEDSLNRLLDYYKELGDEDFEFGSLGDFDKQLVGM 231

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BLAST of CsaV3_5G005480 vs. TAIR10
Match: AT4G22680.1 (myb domain protein 85)

HSP 1 Score: 264.2 bits (674), Expect = 7.6e-71
Identity = 116/132 (87.88%), Postives = 124/132 (93.94%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWT EEDKKL+ FILT GHCCWRA+PKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTVEEDKKLINFILTNGHCCWRALPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL   EEQLVIDLHA+LGN+WSKIA+RLPGRTDNEIKNHWNTHIKKKL+KMG
Sbjct: 61  LRPDLKRGLLSHDEEQLVIDLHANLGNKWSKIASRLPGRTDNEIKNHWNTHIKKKLLKMG 120

Query: 121 IDPATHQPLKKQ 133
           IDP THQPL ++
Sbjct: 121 IDPMTHQPLNQE 132

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BLAST of CsaV3_5G005480 vs. TAIR10
Match: AT4G12350.1 (myb domain protein 42)

HSP 1 Score: 263.8 bits (673), Expect = 9.9e-71
Identity = 123/148 (83.11%), Postives = 131/148 (88.51%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKL VKKGPWTAEEDKKL+ FILT GHCCWRA+PKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLMVKKGPWTAEEDKKLINFILTNGHCCWRALPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL + EEQLVIDLHA LGNRWSKIAARLPGRTDNEIKNHWNTHIKKKL+KM 
Sbjct: 61  LRPDLKRGLLSDAEEQLVIDLHALLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKME 120

Query: 121 IDPATHQPLKKQQTESSSQGSSTDSSVA 149
           IDP+THQPL K  T+++    S  SS A
Sbjct: 121 IDPSTHQPLNKVFTDTNLVDKSETSSKA 148

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BLAST of CsaV3_5G005480 vs. TAIR10
Match: AT5G16600.1 (myb domain protein 43)

HSP 1 Score: 253.1 bits (645), Expect = 1.7e-67
Identity = 112/140 (80.00%), Postives = 123/140 (87.86%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDK+G+KKGPWT EEDKKL+ FILT GHCCWRA+PKL+GL RCGKSCRLRW NY
Sbjct: 1   MGRQPCCDKVGLKKGPWTIEEDKKLINFILTNGHCCWRALPKLSGLLRCGKSCRLRWINY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL E EEQ VI+LHA LGNRWSKIA+ LPGRTDNEIKNHWNTHIKKKL KMG
Sbjct: 61  LRPDLKRGLLSEYEEQKVINLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120

Query: 121 IDPATHQPLKKQQTESSSQG 141
           IDP TH+PL +Q+    +QG
Sbjct: 121 IDPLTHKPLSEQEASQQAQG 140

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BLAST of CsaV3_5G005480 vs. TAIR10
Match: AT1G66230.1 (myb domain protein 20)

HSP 1 Score: 247.7 bits (631), Expect = 7.3e-66
Identity = 117/169 (69.23%), Postives = 134/169 (79.29%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDK+G+KKGPWTAEED+KL+ FILT G CCWRAVPKL+GL RCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKVGLKKGPWTAEEDRKLINFILTNGQCCWRAVPKLSGLLRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL + EE++VIDLH+ LGNRWSKIA+ LPGRTDNEIKNHWNTHIKKKL KMG
Sbjct: 61  LRPDLKRGLLSDYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120

Query: 121 IDPATHQPLKKQQTESSSQGSSTDSSVAITTPLSEANSTTKEQPLSSHI 170
           IDP TH+PL   + E         ++   T P  E    T E+PL ++I
Sbjct: 121 IDPLTHKPLSIVEKEDEEPLKKLQNN---TVPFQE----TMERPLENNI 162

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BLAST of CsaV3_5G005480 vs. TAIR10
Match: AT5G62320.1 (myb domain protein 99)

HSP 1 Score: 219.2 bits (557), Expect = 2.8e-57
Identity = 121/238 (50.84%), Postives = 144/238 (60.50%), Query Frame = 0


Query: 2   GRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHC-------CWRAVPKLAGLRRCGKSCR 61
           GR+PCCD++G++KGPWT EED KLV F+   G+C       CWR VPKLAGLRRCGKSCR
Sbjct: 3   GRKPCCDEVGLRKGPWTVEEDGKLVDFLRARGNCGGGGGGWCWRDVPKLAGLRRCGKSCR 62

Query: 62  LRWTNYLRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKK 121
           LRWTNYLRPDLKRGL  E E QLVIDLHA LGNRWSKIA  LPGRTDN+IKN+WNTHIK+
Sbjct: 63  LRWTNYLRPDLKRGLFTEEEIQLVIDLHARLGNRWSKIAVELPGRTDNDIKNYWNTHIKR 122

Query: 122 KLIKMGIDPATHQPLKKQQTESSSQGSSTDSSVAITTPLSEANSTTKEQPLSSHI--WME 181
           KLI+MGIDP TH+   +Q+          D      T +S A        LS ++    +
Sbjct: 123 KLIRMGIDPNTHRRFDQQKVNEEETILVNDPKPLSETEVSVALKNDTSAVLSGNLNQLAD 182

Query: 182 ALEDESWWNFPTWGSE-----------IYSDFGLYSSEDSLNRLLDYYKELGDEDFEL 220
              D+  W+F     E           +     + SS  S + L   Y E G ED EL
Sbjct: 183 VDGDDQPWSFLMENDEGGGGDAAGELTMLLSGDITSSCSSSSSLWMKYGEFGYEDLEL 240

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BLAST of CsaV3_5G005480 vs. Swiss-Prot
Match: sp|Q50EX6|ODO1_PETHY (Protein ODORANT1 OS=Petunia hybrida OX=4102 GN=ODO1 PE=2 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 8.0e-70
Identity = 119/146 (81.51%), Postives = 131/146 (89.73%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTAEEDKKL++FILT G CCWRAVPKLAGL+RCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTAEEDKKLISFILTNGQCCWRAVPKLAGLKRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL + EE+LVIDLH+ LGNRWSKIAARLPGRTDNEIKNHWNTHIKKKL+KMG
Sbjct: 61  LRPDLKRGLLSDAEEKLVIDLHSRLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKMG 120

Query: 121 IDPATHQPLKKQQTESSSQGSSTDSS 147
           IDP TH+PLKK+   S    + +D +
Sbjct: 121 IDPVTHEPLKKEANLSDQPTTESDQN 146

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BLAST of CsaV3_5G005480 vs. Swiss-Prot
Match: sp|Q9C7U7|MYB20_ARATH (Transcription factor MYB20 OS=Arabidopsis thaliana OX=3702 GN=MYB20 PE=2 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.3e-64
Identity = 117/169 (69.23%), Postives = 134/169 (79.29%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDK+G+KKGPWTAEED+KL+ FILT G CCWRAVPKL+GL RCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKVGLKKGPWTAEEDRKLINFILTNGQCCWRAVPKLSGLLRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL + EE++VIDLH+ LGNRWSKIA+ LPGRTDNEIKNHWNTHIKKKL KMG
Sbjct: 61  LRPDLKRGLLSDYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG 120

Query: 121 IDPATHQPLKKQQTESSSQGSSTDSSVAITTPLSEANSTTKEQPLSSHI 170
           IDP TH+PL   + E         ++   T P  E    T E+PL ++I
Sbjct: 121 IDPLTHKPLSIVEKEDEEPLKKLQNN---TVPFQE----TMERPLENNI 162

[Close]

BLAST of CsaV3_5G005480 vs. Swiss-Prot
Match: sp|P80073|MYB2_PHYPA (Myb-related protein Pp2 OS=Physcomitrella patens subsp. patens OX=3218 GN=PP2 PE=2 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.5e-55
Identity = 92/130 (70.77%), Postives = 112/130 (86.15%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGR+PCC+K+G+++GPWT+EED+KLV+ I   G  CWRA+PKLAGL RCGKSCRLRWTNY
Sbjct: 1   MGRKPCCEKVGLRRGPWTSEEDQKLVSHITNNGLSCWRAIPKLAGLLRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRG+  E EE L++DLHA LGNRWS+IAA+LPGRTDNEIKN+WNT +KK+L   G
Sbjct: 61  LRPDLKRGIFSEAEENLILDLHATLGNRWSRIAAQLPGRTDNEIKNYWNTRLKKRLRSQG 120

Query: 121 IDPATHQPLK 131
           +DP TH PL+
Sbjct: 121 LDPNTHLPLE 130

[Close]

BLAST of CsaV3_5G005480 vs. Swiss-Prot
Match: sp|Q9LXF1|MYB16_ARATH (Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.8e-54
Identity = 101/166 (60.84%), Postives = 124/166 (74.70%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGR PCCDKLG+KKGPWT EED+KL+ +I  +GH  WR++P+ AGL RCGKSCRLRWTNY
Sbjct: 1   MGRSPCCDKLGLKKGPWTPEEDQKLLAYIEEHGHGSWRSLPEKAGLHRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPD+KRG  +  EEQ +I LHA LGNRWS IA  LP RTDNEIKN+WNTH+KK+L+KMG
Sbjct: 61  LRPDIKRGKFNLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLVKMG 120

Query: 121 IDPATHQPLKKQQTESSSQGSSTDSSVAITTPLSEANSTTKEQPLS 167
           IDP TH+P  K +T  SS G S ++++   T   E+     E  L+
Sbjct: 121 IDPVTHKP--KNETPLSSLGLSKNAAILSHTAQWESARLEAEARLA 164

[Close]

BLAST of CsaV3_5G005480 vs. Swiss-Prot
Match: sp|Q9LE63|MY106_ARATH (Transcription factor MYB106 OS=Arabidopsis thaliana OX=3702 GN=MYB106 PE=2 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 8.0e-54
Identity = 97/146 (66.44%), Postives = 116/146 (79.45%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGR PCCDK G+KKGPWT EED+KL+ +I  +GH  WR++P+ AGL+RCGKSCRLRWTNY
Sbjct: 1   MGRSPCCDKAGLKKGPWTPEEDQKLLAYIEEHGHGSWRSLPEKAGLQRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPD+KRG     EEQ +I LHA LGNRWS IA  LP RTDNEIKN+WNTH+KK+LIKMG
Sbjct: 61  LRPDIKRGKFTVQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLIKMG 120

Query: 121 IDPATHQPLKKQQTESSSQGSSTDSS 147
           IDP TH+   K +T SSS G S +++
Sbjct: 121 IDPVTHK--HKNETLSSSTGQSKNAA 144

[Close]

BLAST of CsaV3_5G005480 vs. TrEMBL
Match: tr|A0A1S3CT62|A0A1S3CT62_CUCME (protein ODORANT1 OS=Cucumis melo OX=3656 GN=LOC103504661 PE=4 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 2.5e-129
Identity = 226/237 (95.36%), Postives = 231/237 (97.47%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAA+LPGRTDNEIKNHWNTHIKKKLIKMG
Sbjct: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAAKLPGRTDNEIKNHWNTHIKKKLIKMG 120

Query: 121 IDPATHQPLKKQQTESSSQGSSTDSSVAITTPLSEANSTTKEQPLSSHIWMEAL-EDESW 180
           IDP THQPLKKQQTESSSQGSSTDSSVAITTPLSEANS  KEQPLS+HIWMEAL +DESW
Sbjct: 121 IDPVTHQPLKKQQTESSSQGSSTDSSVAITTPLSEANSNAKEQPLSNHIWMEALDQDESW 180

Query: 181 WNFPTWGSEIYSDFGLYSSEDSLNRLLDYYKELGDEDFELSSLGDFNKHLVSIAEKN 237
           WNFPTWG+EIYSDFGLYSSEDSLNRLLDYYKELGDEDFELSSLGDFN+ LV IAEKN
Sbjct: 181 WNFPTWGTEIYSDFGLYSSEDSLNRLLDYYKELGDEDFELSSLGDFNR-LVGIAEKN 236

[Close]

BLAST of CsaV3_5G005480 vs. TrEMBL
Match: tr|A0A2N9HSS4|A0A2N9HSS4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42645 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 4.1e-79
Identity = 161/252 (63.89%), Postives = 175/252 (69.44%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWT EEDKKLV FILT+G CCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTVEEDKKLVNFILTHGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL+E EEQLVIDLHA LGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG
Sbjct: 61  LRPDLKRGLLNEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120

Query: 121 IDPATHQPLKKQQTESSS------------------------QGSSTDSSVAITTPLSEA 180
           IDP TH+PL K+ T   +                        Q SS D+S A T   S  
Sbjct: 121 IDPITHEPLHKEATPQDTLSHAIDQRDIEVINNHQESTKICGQASSIDNSSAPTENSSTD 180

Query: 181 NSTTKEQP----LSSHIWMEALEDESWWNFPTWGSEIYSDFGLYSSEDSLNRLLDYYKEL 225
            S + E      L ++IW E   DES WNFP  G E YS+FG  SS ++ + L   YK+ 
Sbjct: 181 ESKSMEPSDNDLLMNYIWSETFLDESLWNFPAAG-ENYSNFG-SSSPENYSELSLNYKDF 240

[Close]

BLAST of CsaV3_5G005480 vs. TrEMBL
Match: tr|A0A0E4B9M8|A0A0E4B9M8_POPPZ (MYB transcriptional factor OS=Populus tremula x Populus tremuloides OX=47664 GN=PtxtMYB075 PE=2 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 9.1e-79
Identity = 163/276 (59.06%), Postives = 180/276 (65.22%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTAEEDKKLV+FIL++G CCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 2   MGRQPCCDKLGVKKGPWTAEEDKKLVSFILSHGQCCWRAVPKLAGLRRCGKSCRLRWTNY 61

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL+E EEQLVIDLHA LGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG
Sbjct: 62  LRPDLKRGLLNEDEEQLVIDLHACLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 121

Query: 121 IDPATHQPLKKQQTESSSQG--------------------------------------SS 180
           IDP TH+PL KQ +   S G                                        
Sbjct: 122 IDPVTHEPLNKQGSPQESTGPCHSNYDQPNLNADGQQVPPQNCGRASXXXXXXXXXXXXX 181

Query: 181 TDSSVAITTPLSEANSTTKEQPLSSHIWMEALEDESWWNFPTWGSEIYSDFGL--YSSED 237
            +SSV      SE NS T   PL S IW E   D+S WNF       YS+FGL   SSED
Sbjct: 182 XNSSVDECIGSSEPNSATDSDPLMSCIWSEVFLDDSSWNFQATRGGDYSEFGLSKSSSED 241

[Close]

BLAST of CsaV3_5G005480 vs. TrEMBL
Match: tr|B9I4L5|B9I4L5_POPTR (MYB family protein OS=Populus trichocarpa OX=3694 GN=POPTR_012G127700v3 PE=2 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 2.2e-77
Identity = 163/276 (59.06%), Postives = 180/276 (65.22%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWTAEEDKKLV FILT+G CCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVNFILTHGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL+E EEQLVIDLHA LGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG
Sbjct: 61  LRPDLKRGLLNEDEEQLVIDLHACLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120

Query: 121 IDPATHQPLKKQQTESSS--------------------------QGSS------------ 180
           IDP TH+PL K ++   S                            SS            
Sbjct: 121 IDPVTHEPLNKLESPQESTVPCHTNYDQPNFNADGQQVLPQNCGHASSXXXXXXXXXXXX 180

Query: 181 TDSSVAITTPLSEANSTTKEQPLSSHIWMEALEDESWWNFPTWGSEIYSDFGL--YSSED 237
            +SSV      SE NST    PL S IW E   D+S WNF       +S+FGL   SSED
Sbjct: 181 ENSSVDECIGSSEPNSTPDSDPLMSCIWSEVFLDDSSWNFQASRGGDFSEFGLSKSSSED 240

[Close]

BLAST of CsaV3_5G005480 vs. TrEMBL
Match: tr|V5K8K7|V5K8K7_9ROSI (MYB transcription factor 2 OS=Betula luminifera OX=312789 GN=MYB2 PE=2 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 2.2e-77
Identity = 161/251 (64.14%), Postives = 178/251 (70.92%), Query Frame = 0


Query: 1   MGRQPCCDKLGVKKGPWTAEEDKKLVTFILTYGHCCWRAVPKLAGLRRCGKSCRLRWTNY 60
           MGRQPCCDKLGVKKGPWT EEDKKLV FILT+G CCWRAVPKLAGLRRCGKSCRLRWTNY
Sbjct: 1   MGRQPCCDKLGVKKGPWTVEEDKKLVNFILTHGQCCWRAVPKLAGLRRCGKSCRLRWTNY 60

Query: 61  LRPDLKRGLLDETEEQLVIDLHAHLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120
           LRPDLKRGLL E+EEQLVIDLHA LGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG
Sbjct: 61  LRPDLKRGLLTESEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG 120

Query: 121 IDPATHQPLKKQQTESSSQGSST---------------DSSVAITTPLSEANSTTKEQPL 180
           IDP TH+PL+K+ T   +   ST               + S  I  P +E +ST + + L
Sbjct: 121 IDPLTHEPLQKEDTPQQTFCHSTTADDDLDLEVINHEQEESQKICAP-TENSSTDESRSL 180

Query: 181 S---------SHIWMEAL-EDESWWNFPTWGSEIYSDFGLYSSEDSLNR-LLDYYKELGD 225
           S         S+IW E +  D+S+WN P   S  Y   GL SSED  +R LLDY K+ GD
Sbjct: 181 SDPGDDDLLMSYIWSETIFLDDSFWNSPA-ASGSYGSLGLPSSEDDSDRWLLDYKKDFGD 240

The following BLAST results are available for this feature:

BLAST of CsaV3_5G005480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143714.1	1.1e-136	100.00	PREDICTED: protein ODORANT1 [Cucumis sativus]	[more]
XP_008467265.1	3.8e-129	95.36	PREDICTED: protein ODORANT1 [Cucumis melo]	[more]
XP_022928784.1	1.8e-110	82.20	protein ODORANT1-like [Cucurbita moschata] >XP_022970227.1 protein ODORANT1-like...	[more]
XP_023550973.1	5.2e-110	81.78	protein ODORANT1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022159685.1	2.1e-103	78.88	protein ODORANT1-like [Momordica charantia]	[more]

BLAST of CsaV3_5G005480 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G22680.1	7.6e-71	87.88	myb domain protein 85	[more]
AT4G12350.1	9.9e-71	83.11	myb domain protein 42	[more]
AT5G16600.1	1.7e-67	80.00	myb domain protein 43	[more]
AT1G66230.1	7.3e-66	69.23	myb domain protein 20	[more]
AT5G62320.1	2.8e-57	50.84	myb domain protein 99	[more]

BLAST of CsaV3_5G005480 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q50EX6\|ODO1_PETHY	8.0e-70	81.51	Protein ODORANT1 OS=Petunia hybrida OX=4102 GN=ODO1 PE=2 SV=1	[more]
sp\|Q9C7U7\|MYB20_ARATH	1.3e-64	69.23	Transcription factor MYB20 OS=Arabidopsis thaliana OX=3702 GN=MYB20 PE=2 SV=1	[more]
sp\|P80073\|MYB2_PHYPA	1.5e-55	70.77	Myb-related protein Pp2 OS=Physcomitrella patens subsp. patens OX=3218 GN=PP2 PE...	[more]
sp\|Q9LXF1\|MYB16_ARATH	2.8e-54	60.84	Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1	[more]
sp\|Q9LE63\|MY106_ARATH	8.0e-54	66.44	Transcription factor MYB106 OS=Arabidopsis thaliana OX=3702 GN=MYB106 PE=2 SV=1	[more]

BLAST of CsaV3_5G005480 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CT62\|A0A1S3CT62_CUCME	2.5e-129	95.36	protein ODORANT1 OS=Cucumis melo OX=3656 GN=LOC103504661 PE=4 SV=1	[more]
tr\|A0A2N9HSS4\|A0A2N9HSS4_FAGSY	4.1e-79	63.89	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42645 PE=4 SV=1	[more]
tr\|A0A0E4B9M8\|A0A0E4B9M8_POPPZ	9.1e-79	59.06	MYB transcriptional factor OS=Populus tremula x Populus tremuloides OX=47664 GN=...	[more]
tr\|B9I4L5\|B9I4L5_POPTR	2.2e-77	59.06	MYB family protein OS=Populus trichocarpa OX=3694 GN=POPTR_012G127700v3 PE=2 SV=...	[more]
tr\|V5K8K7\|V5K8K7_9ROSI	2.2e-77	64.14	MYB transcription factor 2 OS=Betula luminifera OX=312789 GN=MYB2 PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G005480.1	CsaV3_5G005480.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 13..63 e-value: 2.2E-13 score: 60.5 coord: 66..114 e-value: 8.9E-14 score: 61.8
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 72..111 e-value: 3.3E-14 score: 52.7 coord: 14..61 e-value: 6.2E-15 score: 55.0
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 16..61 e-value: 3.97625E-9 score: 49.8814
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 72..112 e-value: 1.30966E-9 score: 51.037
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 12..67 e-value: 3.2E-18 score: 67.3
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 71..144 e-value: 2.6E-20 score: 74.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..164
None	No IPR available	PANTHER	PTHR10641:SF905	MYB TRANSCRIPTION FACTOR-RELATED	coord: 1..158
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 1..158
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..61 score: 14.089
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 62..116 score: 27.142
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 11..108

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_5G005480	CSPI05G08080	Wild cucumber (PI 183967)	cpicucB285
CsaV3_5G005480	Cucsa.115620	Cucumber (Gy14) v1	cgycucB153
CsaV3_5G005480	CmaCh15G013880	Cucurbita maxima (Rimu)	cmacucB0341
CsaV3_5G005480	CmoCh15G014530	Cucurbita moschata (Rifu)	cmocucB0336
CsaV3_5G005480	Cp4.1LG13g00790	Cucurbita pepo (Zucchini)	cpecucB0224
CsaV3_5G005480	Cp4.1LG05g06950	Cucurbita pepo (Zucchini)	cpecucB0916
CsaV3_5G005480	Carg20791	Silver-seed gourd	carcucB0776
CsaV3_5G005480	Cla003566	Watermelon (97103) v1	cucwmB440
CsaV3_5G005480	MELO3C005406	Melon (DHL92) v3.5.1	cucmeB360
CsaV3_5G005480	ClCG01G005200	Watermelon (Charleston Gray)	cucwcgB385
CsaV3_5G005480	Lsi09G005500	Bottle gourd (USVL1VR-Ls)	cuclsiB345
CsaV3_5G005480	MELO3C005406.2	Melon (DHL92) v3.6.1	cucmedB352
CsaV3_5G005480	Cla97C01G005430	Watermelon (97103) v2	cucwmbB351
CsaV3_5G005480	Bhi12G000518	Wax gourd	cucwgoB449

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_5G005480	Wax gourd	cucwgoB454
CsaV3_5G005480	Cucumber (Chinese Long) v3	cuccucB122
CsaV3_5G005480	Silver-seed gourd	carcucB0752
CsaV3_5G005480	Cucumber (Gy14) v2	cgybcucB232
CsaV3_5G005480	Cucumber (Gy14) v1	cgycucB395
CsaV3_5G005480	Cucurbita maxima (Rimu)	cmacucB0731
CsaV3_5G005480	Cucurbita moschata (Rifu)	cmocucB0719
CsaV3_5G005480	Bottle gourd (USVL1VR-Ls)	cuclsiB405
CsaV3_5G005480	Melon (DHL92) v3.5.1	cucmeB414
CsaV3_5G005480	Watermelon (97103) v1	cucwmB427