Cucsa.114980 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAACACCTTTTTCTCTCTCTCTCTCTCTCCCTTCACTTCAGCTCTCTCAACTCAACTCAACTCAACGCAACCAACTCTTCTTCTCTTCCCTTCTCAATTTTCCATCCACGGTTCTTCGATATGAGTTCCAAGATCTGCAGATCTATTTCCGGAGCCGCCAGGTCCATCCTCGCTGCTTCCCGCACCTCTCGCGCTTATTCCACTGGTAATTTTACGTTTTCTTTGGGTGCATTTTTTTGAAAATTTTGGAGTTCGATTCCTTTAGACGCGGTGTTTTTGTGATCATCAGGCAAGTACTTGACCTGAAATGGAATGGATCTTTGTTTTATAAGGTGTTATTTGCTTTTTATTTCAATCTCCGATTTGTTTGTGTTAGATTATTGATGTATAGGTAATGACTGTGAATGACTGAACTCCGGAGAATTGGAATGAGAAATTAAATTGCAGTTCCGTATTTCAATGTCGTTCTGGTTTATGTTTAAAATGTTTGAGCTAGGTTGATCTGACGCCAGATCTATTTGTTTGTTTAAGCAAGTATGTGAGATGAAATGGTCGAATCTCTGTTTAATGACTGTTTTATCGGTTTCTCTGAGTTAATTTCGGTTTTCTGATAAGCTTGGTTTCTTTCGCGTTGTAATGTCGGTTTTCGTTTATGTCTCTGTGCAATAGACAGTTATTGTGAACAAATAGTTGNGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAGGTTGCTATGACGCCTGATCTATTTGTTTGTCTAAGCAAGTATTCGAGAAGAAATTGCGGAATCTCTGTTTAGGAATGCTTTATCGGTTTTCCTTCACTAATTTTCGTTTTCTGAGAAGCTCAATTATCTTTACATTTCAGCGTCAGTTTTCGTTTATGTCTCTGTGCGATAGACAGTTATTGTGAACGAATTGCTGTGAGACAGATTGTAGCTTCGTATTTCAATGTTTAACTAACCGAATATGATTTCTACACCTTATGAAGTGAATACTTCCTTTACCGGTTTTTTCAATGGCAGGAGGCAGAGCCGCGGCTTCCGCAGCAGCAGTATCGCTACGAGAAAGGTTGCCTTCTCTTGCTTCAATCTATAAGAATGCTGGATCTGGATACGCATCTAGAGAATGGATTTCAGGACTGCTTGCTCTTCCTGCTGGAGGTTTGTCGACATTACAAAACTCTAATAAAACAAATGTTATTAATTCTGGGGAAAATGCTTGAAATTTCTTCCATTCGCTGGGTGTAGAATTTGATTTTATGGATCCAGTAGGGATGGAGCCAAAATAAGATGGGATGGGCATAGGCCTCCATCTTAGGTTGTGAAAATTTACAATGTCGTGGCCTCTGGCATTTTCATTTTCTTTTTTTATTTCTAAAACTTTAGAACCTAAACTTTATATAGTTTTCTTACTCTGGCCCGGCTTGTTGCAAAATTATTAGTTTATACAATTTATTATCCATATCTAATATATCCTCTTTTACAATAGGAATTAAAATTAGCATGAGGTCTCTACAGTTAGGAGAGTTATAATCGAGCGTCTTAAAAACTTTATCAGAATAAAAATGGCTAAATGTTGGTGTATATCATGATAGAACGATGTATTGGATTAGGAGGGTGATCCACTTTCTCCCATTATTTGTGTCCCGTGTCCACCGTCCTAACTGACACAATCTTTTTCTTTGAATGTAGTTTTCATGCTCCAGGAGCAGGAAGCACATGCCGCAGAGGTAATATAATAAACTTGAATTCTTTGTTCTCGTTTTCCTTGCCCTTAATGAGTAGTTAGTGATCACCATTAGTTATTCTAACTTACTTTCTCGTAACTTCTCTCAGTTCGAGCGCACGTTTATAGCCATCAAGCCTGATGGTGTACAAAGAGGGCTGGTAAGACTAAACATGCCCATGCGATGTTTTTCTTCATGCCAATTCTCATTTGACATTTAGTAGCTCTGTTTTATTATCTTGAACTTGGTATTTGTTTTCAAGATTGTGAGTTCTCTTGATTTTTTCAATTTTCGATCTTCAACATAAACGATACTTCTTTAGGTTCCCTAATTTTGAATCCAATCATATGTTTTGTATTTAGGTTGACTGCCTATTTAGATTTCACAAGCTTGATATTATAATACATATGATGGAATTTCATCTTAACATCAACTGATAACGAGAGGCATAGTTCATGTGTGTTGTAAAAGATGAGGTTCTTGACTTTTTTTATGGTAGGTTCTCGATATGATTCACAAGATTTCTATTATTGCTCGATGATCTATCTCAACCCCACATTAGAATAAAAGATAAAAATAAAAAGAAGGAAAAAGCAAAGATGTTTGTACTAATCTATACTGATTGTTATTTTCTCCTGATTGGGAAGGGTGTCCAAATATTTATCTGATCCAAATCTCATCATGTGCAACAGATATCAGAAATCATATCCCGTTTCGAGAGGAAAGGGTTTAAACTCGTAGGCATTAAAGTTATTGTCCCATCAAAGGAATTTGCTCAGAAGCATTATCACGATCTGAAGGAAAGACCCTTCTTTAATGGCCTCTGCGAATTTCTTAGCTCTGGCCCCGTCATTGCAATGGTTAGTCGGAATAAAAATTATTGTATGTTGTTTGCAACTGCTTTTGAGCTTGGTTAGATTATACCTTTTTATAATTCTACAGGTTTGGGAAGGCGAGGGAGTGATCAGATATGGACGAAAACTTATTGGAGCAACAGATCCACAGAAATCTGAGCCTGGTACCATTCGAGGAGATCTAGCTGTTGTAGTTAGCAGGTAATGTTTATTACTTCAATTAATACGTAGCCTTTTGGTTACAATTGTTAGACCAATTATTCTAAGGAAGACGACACACAACACAACATGAGAATCACCTCTAGATTCTAACACTAAGGCTCAGCCAACTTCCCCAGTTACTTATAGTTGGTATAGTTAGTTAACTCATTTATTCATTATGAATGTCTCACCCCAAAATGATCCTCAAAAGTTCAAAACTCCAAAATAAATAAAAGTATGCAAACTAGAAATAGTATTAAATCATTTAAATACGGAGGAACATTATACATAGATAACATTAATTTGCAGGAGGGTGTTAAAAGATCATACATTTTTTACAAAACATCTATTATAATTTAACAAATCGGTCTTGTGTTTGATCTAAATAACACAGGAACATCATCCATGGAAGCGATGGGCCAGAGACTGCAAAGGATGAGATCAACTTGTGGTTCAAGCCAGAGGAATTGGTTAGCTACACAAGCAATGCAGAGAAATGGGTCTATGGAGATAACTGATGAGTTTTCCTATCCCTTTTTTCTTTTTTCTTTCTTCTTGTCATTCTTCCTTTGGGTTTGGGTTTGGGTTTTAATTTACTCGAGCTTTGGCAACAGTACCCGTGAAGAGAAGAGCGTCGGGTATTTTCATAATTGTGCCGATAAAATAATGCGCTGAGCCCAAGCTATATGAATGGCTCATTGATATATATGCTTACCAAAGCATAACAATTTTCTTAGAGAGTTTTACCACAATAAACAAACAGTTGAATAGTATAATAACTTACTTAGTTGCTGATATATATATAAATATATTATCCCATAATTTTGATTCTTCATTAGA TAAACACCTTTTTCTCTCTCTCTCTCTCTCCCTTCACTTCAGCTCTctcaactcaactcaactcaacgcaaccaactcTTCTTCTCTTCCCTTCTCAATTTTCCATCCACGGTTCTTCGATATGAGTTCCAAGATCTGCAGATCTATTTCCGGAGCCGCCAGGTCCATCCTCGCTGCTTCCCGCACCTCTCGCGCTTATTCCACTGGAGGCAGAGCCGCGGCTTCCGCAGCAGCAGTATCGCTACGAGAAAGGTTGCCTTCTCTTGCTTCAATCTATAAGAATGCTGGATCTGGATACGCATCTAGAGAATGGATTTCAGGACTGCTTGCTCTTCCTGCTGGAGTTTTCATGCTCCAGGAGCAGGAAGCACATGCCGCAGAGTTCGAGCGCACGTTTATAGCCATCAAGCCTGATGGTGTACAAAGAGGGCTGATATCAGAAATCATATCCCGTTTCGAGAGGAAAGGGTTTAAACTCGTAGGCATTAAAGTTATTGTCCCATCAAAGGAATTTGCTCAGAAGCATTATCACGATCTGAAGGAAAGACCCTTCTTTAATGGCCTCTGCGAATTTCTTAGCTCTGGCCCCGTCATTGCAATGGTTTGGGAAGGCGAGGGAGTGATCAGATATGGACGAAAACTTATTGGAGCAACAGATCCACAGAAATCTGAGCCTGGTACCATTCGAGGAGATCTAGCTGTTGTAGTTAGCAGGAACATCATCCATGGAAGCGATGGGCCAGAGACTGCAAAGGATGAGATCAACTTGTGGTTCAAGCCAGAGGAATTGGTTAGCTACACAAGCAATGCAGAGAAATGGGTCTATGGAGATAACTGATGAGttttcctatcccttttttcttttttctttcttcttgtcattcttcctttGGGTTTGGGTTTGGGTTTTAATTTACTCGAGCTTTGGCAACAGTACCCGTGAAGAGAAGAGCGTCGGGTATTTTCATAATTGTGCCGATAAAATAATGCGCTGAGCCCAAGCTATATGAATGGCTCATTGATATATATGCTTACCAAAGCATAACAATTTTCTTAGAGAGTTTTACCACAATAAACAAACAGTTGAATAGTATAATAACTTACTTAGTTGCTGatatatatataaatatattatCCCATAATTTTGATTCTTCATTAGA ATGAGTTCCAAGATCTGCAGATCTATTTCCGGAGCCGCCAGGTCCATCCTCGCTGCTTCCCGCACCTCTCGCGCTTATTCCACTGGAGGCAGAGCCGCGGCTTCCGCAGCAGCAGTATCGCTACGAGAAAGGTTGCCTTCTCTTGCTTCAATCTATAAGAATGCTGGATCTGGATACGCATCTAGAGAATGGATTTCAGGACTGCTTGCTCTTCCTGCTGGAGTTTTCATGCTCCAGGAGCAGGAAGCACATGCCGCAGAGTTCGAGCGCACGTTTATAGCCATCAAGCCTGATGGTGTACAAAGAGGGCTGATATCAGAAATCATATCCCGTTTCGAGAGGAAAGGGTTTAAACTCGTAGGCATTAAAGTTATTGTCCCATCAAAGGAATTTGCTCAGAAGCATTATCACGATCTGAAGGAAAGACCCTTCTTTAATGGCCTCTGCGAATTTCTTAGCTCTGGCCCCGTCATTGCAATGGTTTGGGAAGGCGAGGGAGTGATCAGATATGGACGAAAACTTATTGGAGCAACAGATCCACAGAAATCTGAGCCTGGTACCATTCGAGGAGATCTAGCTGTTGTAGTTAGCAGGAACATCATCCATGGAAGCGATGGGCCAGAGACTGCAAAGGATGAGATCAACTTGTGGTTCAAGCCAGAGGAATTGGTTAGCTACACAAGCAATGCAGAGAAATGGGTCTATGGAGATAACTGA MSSKICRSISGAARSILAASRTSRAYSTGGRAAASAAAVSLRERLPSLASIYKNAGSGYASREWISGLLALPAGVFMLQEQEAHAAEFERTFIAIKPDGVQRGLISEIISRFERKGFKLVGIKVIVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVIRYGRKLIGATDPQKSEPGTIRGDLAVVVSRNIIHGSDGPETAKDEINLWFKPEELVSYTSNAEKWVYGDN*
BLAST of Cucsa.114980 vs. Swiss-Prot
Match: NDK3_ARATH (Nucleoside diphosphate kinase III, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDPK3 PE=1 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 1.4e-103 Identity = 187/239 (78.24%), Postives = 215/239 (89.96%), Query Frame = 1
BLAST of Cucsa.114980 vs. Swiss-Prot
Match: NDK4_ARATH (Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDK4 PE=1 SV=2) HSP 1 Score: 376.7 bits (966), Expect = 1.9e-103 Identity = 186/238 (78.15%), Postives = 209/238 (87.82%), Query Frame = 1
BLAST of Cucsa.114980 vs. Swiss-Prot
Match: NDK4_SPIOL (Nucleoside diphosphate kinase 4, chloroplastic OS=Spinacia oleracea GN=NDK4 PE=1 SV=1) HSP 1 Score: 354.4 bits (908), Expect = 9.9e-97 Identity = 178/239 (74.48%), Postives = 201/239 (84.10%), Query Frame = 1
BLAST of Cucsa.114980 vs. Swiss-Prot
Match: NDK3_SPIOL (Nucleoside diphosphate kinase 3 OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 6.5e-72 Identity = 128/153 (83.66%), Postives = 141/153 (92.16%), Query Frame = 1
BLAST of Cucsa.114980 vs. Swiss-Prot
Match: NDK_PROM3 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9303) GN=ndk PE=3 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 6.1e-54 Identity = 98/145 (67.59%), Postives = 121/145 (83.45%), Query Frame = 1
BLAST of Cucsa.114980 vs. TrEMBL
Match: A0A0A0KX20_CUCSA (Nucleoside diphosphate kinase OS=Cucumis sativus GN=Csa_4G052590 PE=3 SV=1) HSP 1 Score: 471.5 bits (1212), Expect = 6.2e-130 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 1
BLAST of Cucsa.114980 vs. TrEMBL
Match: A0A0V0HJP7_SOLCH (Nucleoside diphosphate kinase OS=Solanum chacoense PE=3 SV=1) HSP 1 Score: 392.5 bits (1007), Expect = 3.7e-106 Identity = 199/240 (82.92%), Postives = 219/240 (91.25%), Query Frame = 1
BLAST of Cucsa.114980 vs. TrEMBL
Match: D5ILC3_SOLTU (Nucleoside diphosphate kinase OS=Solanum tuberosum GN=NDPK1 PE=3 SV=1) HSP 1 Score: 392.5 bits (1007), Expect = 3.7e-106 Identity = 199/240 (82.92%), Postives = 219/240 (91.25%), Query Frame = 1
BLAST of Cucsa.114980 vs. TrEMBL
Match: K4CPN9_SOLLC (Nucleoside diphosphate kinase OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 391.3 bits (1004), Expect = 8.2e-106 Identity = 198/240 (82.50%), Postives = 220/240 (91.67%), Query Frame = 1
BLAST of Cucsa.114980 vs. TrEMBL
Match: D3U1X1_SOLTU (Nucleoside diphosphate kinase OS=Solanum tuberosum GN=NDPK1 PE=2 SV=1) HSP 1 Score: 390.6 bits (1002), Expect = 1.4e-105 Identity = 198/240 (82.50%), Postives = 218/240 (90.83%), Query Frame = 1
BLAST of Cucsa.114980 vs. TAIR10
Match: AT4G11010.1 (AT4G11010.1 nucleoside diphosphate kinase 3) HSP 1 Score: 377.1 bits (967), Expect = 8.1e-105 Identity = 187/239 (78.24%), Postives = 215/239 (89.96%), Query Frame = 1
BLAST of Cucsa.114980 vs. TAIR10
Match: AT4G23900.1 (AT4G23900.1 Nucleoside diphosphate kinase family protein) HSP 1 Score: 376.7 bits (966), Expect = 1.1e-104 Identity = 186/238 (78.15%), Postives = 209/238 (87.82%), Query Frame = 1
BLAST of Cucsa.114980 vs. TAIR10
Match: AT5G63310.1 (AT5G63310.1 nucleoside diphosphate kinase 2) HSP 1 Score: 193.4 bits (490), Expect = 1.7e-49 Identity = 97/200 (48.50%), Postives = 127/200 (63.50%), Query Frame = 1
BLAST of Cucsa.114980 vs. TAIR10
Match: AT4G09320.1 (AT4G09320.1 Nucleoside diphosphate kinase family protein) HSP 1 Score: 188.0 bits (476), Expect = 6.9e-48 Identity = 89/168 (52.98%), Postives = 120/168 (71.43%), Query Frame = 1
BLAST of Cucsa.114980 vs. NCBI nr
Match: gi|449462537|ref|XP_004148997.1| (PREDICTED: nucleoside diphosphate kinase 3-like [Cucumis sativus]) HSP 1 Score: 471.5 bits (1212), Expect = 8.9e-130 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 1
BLAST of Cucsa.114980 vs. NCBI nr
Match: gi|659102101|ref|XP_008451953.1| (PREDICTED: nucleoside diphosphate kinase 3-like [Cucumis melo]) HSP 1 Score: 461.8 bits (1187), Expect = 7.1e-127 Identity = 230/238 (96.64%), Postives = 235/238 (98.74%), Query Frame = 1
BLAST of Cucsa.114980 vs. NCBI nr
Match: gi|294862567|gb|ADF45668.1| (nucleoside diphosphate kinase 1 [Solanum tuberosum]) HSP 1 Score: 392.5 bits (1007), Expect = 5.3e-106 Identity = 199/240 (82.92%), Postives = 219/240 (91.25%), Query Frame = 1
BLAST of Cucsa.114980 vs. NCBI nr
Match: gi|723723975|ref|XP_010325356.1| (PREDICTED: nucleoside diphosphate kinase 3-like [Solanum lycopersicum]) HSP 1 Score: 391.3 bits (1004), Expect = 1.2e-105 Identity = 198/240 (82.50%), Postives = 220/240 (91.67%), Query Frame = 1
BLAST of Cucsa.114980 vs. NCBI nr
Match: gi|697156352|ref|XP_009586926.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104084708 [Nicotiana tomentosiformis]) HSP 1 Score: 391.0 bits (1003), Expect = 1.5e-105 Identity = 198/239 (82.85%), Postives = 218/239 (91.21%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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