CmaCh04G006850 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTCCAAGATCTGTAGATCTGCTTCTAGAGCCGCCAGGTCTATCCTCGCCGCTTCACGGACCTCTCGCTCTTATTCCGCTGGTAATATCGTTTGTATTTGATTCATCTTTGTTTTTTTATTGTCTTGTTTCTGATCCGGTTTTTGTTTGTTCATTTGCAAAATATTCCACCTGAAATGGATGGATCTAAAAGTAATACTGTTATATAGAAATATATTTGAGCTAGTTTCTGTTTTAGGAAGTATTATTTGCTTTTGGATTTCACTTTCGGTTTTCTTTTTTGTCTCTAATAAACTTTTGGAAATCAAGGAAAGATGTAAAAAGATTTAGGAAGTTCACATTAACTTGAAAATAGTTTGTATATAAATGGGTGATCTGTTGAGCAAATAATTGTATTTGCTCAACAGAAATTTAACAAAGTACAACTCAATATTTACCAAGGTAACTGAATTACAAATAAAGGTAAGAGCATCTCGTGAGATGCATTGACAGTCTCTGTGCTGTATAGACGGTGATTGTGAGCGAGTTACTATGGAGAATTGAAATTGGGAGATTGTAGCTTCGTGTTTCAATGTCGGTTTTGTTTATGTTACAATGTTGGAGATAGTTTGCACGGACGCGGGATCTATTGGTTCATTTATGCATGTATTTTCAACCTGAAATGCCTGAATCTCTGTTTTATGACTGTTTTATCGGTTTTTCCGAGTAGATTTCGGTTTTTGGGAAGCGCGATTTGCTGTGTATCCGATGTCGCTTTTTGTTTGCTTCTATGCGTATTAGAAAGACTGTGAACGAATGGCTCCGACTAATTGAAATGAGAAATTTTAGCTTCGTATTTCGATGTCGATTTTGTTTATGTGCATGCGTTGTGGACTGAATGTGAATTACTCCAACTTATCGAAATGAAAACTAACTGTAGTTTGTGTTGGCTCAATGGCAGGTGGAAGAGTCGTAGGTTCCGCTGCTGCAGTGACGCTAAGGGAAAAGTCCTCTTCTCTTGCTTCAATCTATGAGAATGCCGGTTCAGCGTACGCATCTAGAGGATGGATTTCAGGATTTCTTGCCCTTCCTGCCGCAGGTTCAGTCGACATAACTCTTATAATATACCTATCTTGATTCTGGGAAACAATTTCTTCTATTCGATGGGGTAGAATTAGATTTCTGGATCCGACATACCTTCTCTGTAATGAAAATAATCTTAAACGTCGGCTTTTACATCAAAAATTAAATTTTAGAAGAAATATAATCCGACTTCCTTAAAAGTTCATCAGAATAAAAATGGCTAATGTTGGTGTGAGTAATTGTTCAACGATGTAAAGATGGGGACGGTGCCAACCCTTTTTCTTTTCCTCCACCCTCTCCCAGTATCTCGATTCACCACCGTCCTAACAATCTTTTTTCTTTTAATGTAGCTTACATGCTCCAGGAGCAGGAAGCACATGCTGCAGAGGTAATATACTAAACATGAATTCTTTCTTCTCGTTTACCTCATCCTTTTTGAAGATCATTATTACACTACACTTACGAGCTTTCGCATAACTTCTCGCAGTTCGAGCGGACCTTTATAGCCATCAAGCCAGATGGCGTACAAAGAGGGCTGGTAAGACTAAACTATCCTTGCGCCGTTTTTCTTAATGCCAATTCTGATTTGATATTTGACATCTATATTTTATTACACTTACATCTGGTATTGGCATCCAAGATTTCTGTTATTCCTCAGCGATCAATTCCAGCCCTATAAGGATAAATTCCAAAAAAAAAGAAAAAAAAAGAACCTTCTGTTACTCTGTATTGATTGTTACTTTTTGACTGATTGGGAAGGGTGTTCGTATATTTATCTGATCCAATACTTGTACTATGTAACAGATAGCAGAAATCATATCACGTTTTGAGAGGAAAGGATTTAAACTTGTAGGCATTAAAGTTATTATTCCTTCAAAGGAATTTGCTCAGAGGCATTATCATGATCTGAAGGAAAGACCCTTCTTTAATGGCCTCTGTGAATTTCTTAGCTCTGGCCCCGTCATCGCAATGGTCAGTAAGAACCAGAAATTTCTGTGTTTAACTGCAACCGCTTTTGAGCTTGGATGAACCTTAAGTTTTTTAATTCTACAGGTTTGGGAAGGTGAGGGAGTGATCAGATATGGACGAAAACTTATTGGAGCAACAGATCCACAGAAATCTGAGCCCGGAACCATTAGAGGAGATCTAGCTGTTATTGTTGGCAGGTAATGCCTTATCTTCAACTTACTCCATAGTCATTTGGTGAAGATAATTAGGACACATTCAAGGAAATGAAACAGAGCATGAGAATTACTCTCTACATCAACTTCCCCAATTACTTCAGCATAACTCATTTCTCCAATTTGAACATCTCACTCCAAAATCTAAATATTAGAAGACGTGGTGTTGCTTTAAAAAATCAAGATTATCATTCGTGCATTTCATCATTCATGGGGATTCTCATTTCAAACATTGAAATATATCAAAATTTAATCGATTGAAAAACTTTCAGTTCCCAAACTTCATGGAAAGTAATAATTCGCTCTTAAAACTTTAGGTTGTAACACTTCCGTCCATTTTATTCACTTAACGTTAATATATAATAACCATGTTTATTCTTCGTATCCTATAAACCAATGAACCAAAGACCATATACGTTTTAGAAGACACTGGCCAATGATTCCTATTGGTCAACCTATATCTTAGTTTACTTGTGAATTAATTTTGAATAATGATAATACAGGATTGAGAGGTGATCTTAATCTAGTTTGATTGAAATATATATGCACAGGAACATCATCCATGGAAGCGATGGACCAGAGACTGCCATAGATGAGATCAAGTTGTGGTTCGAACCAGAGGAATTGGTTAAATACACAAGTAACTCAGAGAAATGGGTGTATGGAGACTGATGAGTTTTCCTTTCCCTCTTTTTTCTGTTAAGCTTCTTTATACTCGAGGTAGGCAACAGCACCCGTGAAGAGCGGCGGGTATTTTCAGAATTCTGCGAATAAAATATGTCCTGTGCTGAGACGAGGCTATGGGCTCATCCTTCCACAGTGCGAAAAACAAATAGTTTTTGAGAGTCTTACTTGTGACAAACAGTTGGTACAACTTCGTTTCTGAGATAATAAGCAGATCTTGATTCCTTCTTTATTGCAACTTTCTCTTTCCATTTTCTTTTGTACTCATATTATATTAGGGGGAGAAGTTCATGAAGATTTCATAATTTCTTTTCATGTGCATTTTAGGATAATTATCTGGTTATGTTGTTAAATTGTAGCAGCAATAAGTGATTAATTAGTTATAGGAAATGAGAAGCACTAAATGAAAAGTCAATAAAGTAATATCAAATTTTGAACTCAATGCGAGAGGATTAGTTTTTTCCTCTCTATAAGCAGATGCCTA ATGAGTTCCAAGATCTGTAGATCTGCTTCTAGAGCCGCCAGGTCTATCCTCGCCGCTTCACGGACCTCTCGCTCTTATTCCGCTGGTGGAAGAGTCGTAGGTTCCGCTGCTGCAGTGACGCTAAGGGAAAAGTCCTCTTCTCTTGCTTCAATCTATGAGAATGCCGGTTCAGCGTACGCATCTAGAGGATGGATTTCAGGATTTCTTGCCCTTCCTGCCGCAGCTTACATGCTCCAGGAGCAGGAAGCACATGCTGCAGAGTTCGAGCGGACCTTTATAGCCATCAAGCCAGATGGCGTACAAAGAGGGCTGATAGCAGAAATCATATCACGTTTTGAGAGGAAAGGATTTAAACTTGTAGGCATTAAAGTTATTATTCCTTCAAAGGAATTTGCTCAGAGGCATTATCATGATCTGAAGGAAAGACCCTTCTTTAATGGCCTCTGTGAATTTCTTAGCTCTGGCCCCGTCATCGCAATGGTTTGGGAAGGTGAGGGAGTGATCAGATATGGACGAAAACTTATTGGAGCAACAGATCCACAGAAATCTGAGCCCGGAACCATTAGAGGAGATCTAGCTGTTATTGTTGGCAGGAACATCATCCATGGAAGCGATGGACCAGAGACTGCCATAGATGAGATCAAGTTGTGGTTCGAACCAGAGGAATTGGTTAAATACACAAGTAACTCAGAGAAATGGGTGTATGGAGACTGATGAGTTTTCCTTTCCCTCTTTTTTCTGTTAAGCTTCTTTATACTCGAGGTAGGCAACAGCACCCGTGAAGAGCGGCGGGTATTTTCAGAATTCTGCGAATAAAATATGTCCTGTGCTGAGACGAGGCTATGGGCTCATCCTTCCACAGTGCGAAAAACAAATAGTTTTTGAGAGTCTTACTTGTGACAAACAGTTGGTACAACTTCGTTTCTGAGATAATAAGCAGATCTTGATTCCTTCTTTATTGCAACTTTCTCTTTCCATTTTCTTTTGTACTCATATTATATTAGGGGGAGAAGTTCATGAAGATTTCATAATTTCTTTTCATGTGCATTTTAGGATAATTATCTGGTTATGTTGTTAAATTGTAGCAGCAATAAGTGATTAATTAGTTATAGGAAATGAGAAGCACTAAATGAAAAGTCAATAAAGTAATATCAAATTTTGAACTCAATGCGAGAGGATTAGTTTTTTCCTCTCTATAAGCAGATGCCTA ATGAGTTCCAAGATCTGTAGATCTGCTTCTAGAGCCGCCAGGTCTATCCTCGCCGCTTCACGGACCTCTCGCTCTTATTCCGCTGGTGGAAGAGTCGTAGGTTCCGCTGCTGCAGTGACGCTAAGGGAAAAGTCCTCTTCTCTTGCTTCAATCTATGAGAATGCCGGTTCAGCGTACGCATCTAGAGGATGGATTTCAGGATTTCTTGCCCTTCCTGCCGCAGCTTACATGCTCCAGGAGCAGGAAGCACATGCTGCAGAGTTCGAGCGGACCTTTATAGCCATCAAGCCAGATGGCGTACAAAGAGGGCTGATAGCAGAAATCATATCACGTTTTGAGAGGAAAGGATTTAAACTTGTAGGCATTAAAGTTATTATTCCTTCAAAGGAATTTGCTCAGAGGCATTATCATGATCTGAAGGAAAGACCCTTCTTTAATGGCCTCTGTGAATTTCTTAGCTCTGGCCCCGTCATCGCAATGGTTTGGGAAGGTGAGGGAGTGATCAGATATGGACGAAAACTTATTGGAGCAACAGATCCACAGAAATCTGAGCCCGGAACCATTAGAGGAGATCTAGCTGTTATTGTTGGCAGGAACATCATCCATGGAAGCGATGGACCAGAGACTGCCATAGATGAGATCAAGTTGTGGTTCGAACCAGAGGAATTGGTTAAATACACAAGTAACTCAGAGAAATGGGTGTATGGAGACTGA MSSKICRSASRAARSILAASRTSRSYSAGGRVVGSAAAVTLREKSSSLASIYENAGSAYASRGWISGFLALPAAAYMLQEQEAHAAEFERTFIAIKPDGVQRGLIAEIISRFERKGFKLVGIKVIIPSKEFAQRHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVIRYGRKLIGATDPQKSEPGTIRGDLAVIVGRNIIHGSDGPETAIDEIKLWFEPEELVKYTSNSEKWVYGD
BLAST of CmaCh04G006850 vs. Swiss-Prot
Match: NDK3_ARATH (Nucleoside diphosphate kinase III, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDPK3 PE=1 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 1.6e-99 Identity = 183/238 (76.89%), Postives = 212/238 (89.08%), Query Frame = 1
BLAST of CmaCh04G006850 vs. Swiss-Prot
Match: NDK4_ARATH (Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDK4 PE=1 SV=2) HSP 1 Score: 361.3 bits (926), Expect = 8.1e-99 Identity = 179/236 (75.85%), Postives = 207/236 (87.71%), Query Frame = 1
BLAST of CmaCh04G006850 vs. Swiss-Prot
Match: NDK4_SPIOL (Nucleoside diphosphate kinase 4, chloroplastic OS=Spinacia oleracea GN=NDK4 PE=1 SV=1) HSP 1 Score: 349.0 bits (894), Expect = 4.1e-95 Identity = 178/238 (74.79%), Postives = 206/238 (86.55%), Query Frame = 1
BLAST of CmaCh04G006850 vs. Swiss-Prot
Match: NDK3_SPIOL (Nucleoside diphosphate kinase 3 OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 1.4e-71 Identity = 124/152 (81.58%), Postives = 140/152 (92.11%), Query Frame = 1
BLAST of CmaCh04G006850 vs. Swiss-Prot
Match: NDK_PROMT (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain NATL2A) GN=ndk PE=3 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 3.2e-55 Identity = 99/145 (68.28%), Postives = 120/145 (82.76%), Query Frame = 1
BLAST of CmaCh04G006850 vs. TrEMBL
Match: A0A0A0KX20_CUCSA (Nucleoside diphosphate kinase OS=Cucumis sativus GN=Csa_4G052590 PE=3 SV=1) HSP 1 Score: 415.2 bits (1066), Expect = 5.2e-113 Identity = 209/237 (88.19%), Postives = 220/237 (92.83%), Query Frame = 1
BLAST of CmaCh04G006850 vs. TrEMBL
Match: A0A059C2N4_EUCGR (Nucleoside diphosphate kinase OS=Eucalyptus grandis GN=EUGRSUZ_E00871 PE=3 SV=1) HSP 1 Score: 382.1 bits (980), Expect = 4.9e-103 Identity = 189/237 (79.75%), Postives = 216/237 (91.14%), Query Frame = 1
BLAST of CmaCh04G006850 vs. TrEMBL
Match: D5ILC3_SOLTU (Nucleoside diphosphate kinase OS=Solanum tuberosum GN=NDPK1 PE=3 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 2.7e-101 Identity = 194/239 (81.17%), Postives = 215/239 (89.96%), Query Frame = 1
BLAST of CmaCh04G006850 vs. TrEMBL
Match: A0A0V0HJP7_SOLCH (Nucleoside diphosphate kinase OS=Solanum chacoense PE=3 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 2.7e-101 Identity = 194/239 (81.17%), Postives = 215/239 (89.96%), Query Frame = 1
BLAST of CmaCh04G006850 vs. TrEMBL
Match: D3U1X1_SOLTU (Nucleoside diphosphate kinase OS=Solanum tuberosum GN=NDPK1 PE=2 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 4.6e-101 Identity = 194/239 (81.17%), Postives = 214/239 (89.54%), Query Frame = 1
BLAST of CmaCh04G006850 vs. TAIR10
Match: AT4G11010.1 (AT4G11010.1 nucleoside diphosphate kinase 3) HSP 1 Score: 363.6 bits (932), Expect = 9.2e-101 Identity = 183/238 (76.89%), Postives = 212/238 (89.08%), Query Frame = 1
BLAST of CmaCh04G006850 vs. TAIR10
Match: AT4G23900.1 (AT4G23900.1 Nucleoside diphosphate kinase family protein) HSP 1 Score: 361.3 bits (926), Expect = 4.5e-100 Identity = 179/236 (75.85%), Postives = 207/236 (87.71%), Query Frame = 1
BLAST of CmaCh04G006850 vs. TAIR10
Match: AT4G09320.1 (AT4G09320.1 Nucleoside diphosphate kinase family protein) HSP 1 Score: 190.7 bits (483), Expect = 1.1e-48 Identity = 86/147 (58.50%), Postives = 112/147 (76.19%), Query Frame = 1
BLAST of CmaCh04G006850 vs. TAIR10
Match: AT5G63310.1 (AT5G63310.1 nucleoside diphosphate kinase 2) HSP 1 Score: 188.7 bits (478), Expect = 4.0e-48 Identity = 86/152 (56.58%), Postives = 108/152 (71.05%), Query Frame = 1
BLAST of CmaCh04G006850 vs. TAIR10
Match: AT1G17410.1 (AT1G17410.1 Nucleoside diphosphate kinase family protein) HSP 1 Score: 84.3 bits (207), Expect = 1.1e-16 Identity = 51/138 (36.96%), Postives = 68/138 (49.28%), Query Frame = 1
BLAST of CmaCh04G006850 vs. NCBI nr
Match: gi|449462537|ref|XP_004148997.1| (PREDICTED: nucleoside diphosphate kinase 3-like [Cucumis sativus]) HSP 1 Score: 415.2 bits (1066), Expect = 7.5e-113 Identity = 209/237 (88.19%), Postives = 220/237 (92.83%), Query Frame = 1
BLAST of CmaCh04G006850 vs. NCBI nr
Match: gi|659102101|ref|XP_008451953.1| (PREDICTED: nucleoside diphosphate kinase 3-like [Cucumis melo]) HSP 1 Score: 412.1 bits (1058), Expect = 6.4e-112 Identity = 205/237 (86.50%), Postives = 219/237 (92.41%), Query Frame = 1
BLAST of CmaCh04G006850 vs. NCBI nr
Match: gi|629107275|gb|KCW72421.1| (hypothetical protein EUGRSUZ_E00871 [Eucalyptus grandis]) HSP 1 Score: 382.1 bits (980), Expect = 7.1e-103 Identity = 189/237 (79.75%), Postives = 216/237 (91.14%), Query Frame = 1
BLAST of CmaCh04G006850 vs. NCBI nr
Match: gi|729295889|ref|XP_010541737.1| (PREDICTED: nucleoside diphosphate kinase IV, chloroplastic/mitochondrial [Tarenaya hassleriana]) HSP 1 Score: 380.6 bits (976), Expect = 2.1e-102 Identity = 186/236 (78.81%), Postives = 215/236 (91.10%), Query Frame = 1
BLAST of CmaCh04G006850 vs. NCBI nr
Match: gi|294862567|gb|ADF45668.1| (nucleoside diphosphate kinase 1 [Solanum tuberosum]) HSP 1 Score: 376.3 bits (965), Expect = 3.9e-101 Identity = 194/239 (81.17%), Postives = 215/239 (89.96%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |