Cp4.1LG01g00480 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTGCGAGTTCTTAAACCAAACGGCAGTTAGAGTCGGAGACGACGGTGACGGAAACGCATCGCATTGGTATTCGCGTCTCTTCTCAACGGCCTTTGCGTACCTTTTAACCTAACCACACAAAACTTCAACAACCAATCTCTCTCTTCCATATAAACCCCTCTTTCTCTCTCCCCCTTTCACTTCACACCAACCACCACTCTCTCCGCTCAAATTTCCCTCTTCACTTCTTCTCTATCAATATGAGTTCCAACATCTGTAGATCTGCTTCTAGAGCCGCCAGGTCCATCCTCGCCGCTTCCCGGACCTCTCGCTCTTATTCCGCTGGTAATATCGTTTGTATTTTGATTCATCTTTGTTTTTTTTTTTTTGTTTTTTTTTTTTAATTTTTTTATTATTGTCTTGTTTCTGATCTGGTTTTTGTTTGTTCATTTGCAAAACATTCCACCTGAAATGGATGGATCTAAGATTAATACTGTTACATAAAAATATATTTGAGCTAGTTTCTGTTTTAGGAAGTACTATTTGCTTTTGGATTTCACTTTCGGTTTTCTTTTTTGTCTGTAATAAACTTTTAGAAATTAAGGAAAGATGTAAAATGATTTAGGAATTTCTCATTAACTTGAAAATGTTTTGTATATAAATGGGTGATCTGTTGAGCAAATAATTGCGAAACAGAAATTTAACAAAGTACAACTGAATATTTACGAAAGTAACTGAATTACAGATAAAGGTAAGAGCAGCTCAGTGAGATGCATTGACAGTCTCTGTGCTGTATAGACGGTGATTGTGAGCGAGTTACTATGGAGAATTGAAATTGGGAGATTGTAGCTTCGTGTTTCAATGTCGGTTTTGTTTATGTTACAATGTTGGAGATAGTTTGCTCTGACGCGGGATCTATTGGTTCATTTTGTCTTGCATTTTCAACCTGAATTCCTGAATCTCTGTTTTATGACTGTTTTATCGGTTTTTCCGAGTCGATTTCGGTTTTTGGGAAGCGCGATTTGCTTTGTATTTCAATGTCGCTTTTTGTTTGTTTCTATGCGTATTAGACCGACTAATTGAAATGAGAAATTTTAGCTTCGTATTTCGATGTCGATTTTGTTTATGTGCATGCCTTGTGGACTGAATGTGAATTACTCCAATTTATCGAAATGAAAACTAACTGTAGTTTGTGTTGACTCAATGGCAGGTGGAAGAGTCGTAGGTTCCGCTGCTGCAGTGACGCTAAGGGAAAAGTCCTCTTCTCTTGCTTCAATCTATGAAAATGCCGGTTCAGCATACGCATCTAGAGGATGGATTTCAGGATTGCTTGCCCTTCCTGCCGCAGGTTCAGTCGACATAACTCTTATAATATACTTGTCTTGATTCTGTGAAAAATGCTATAAATTTCTTCCATTAGATGGGGTAGAATTAGATTTCTGGATCCGACATACCTATTCAGGACAGAACGATGAAAGGAGGGGCTCCTTCTCTGTAATGAAACTATTATGTTAAACTTTTTGCCATCTACTTATCATATTTAATACGTCGTCTTTTACATCAAAAATTAAATTTTAGAAGAAATAAAATCCGACTTCCTTCGAAGTTCATCAGAATAAAAATGGCTAATGTTGGTGTAAGTAATTGTACAACGATGTAAAGATGGGGACGGTGCCAACCCTTTTTCTTTTCCTCCGTCCTAACATATGATTATCTTTTTTCTTTTAATGTAGCTTACATGCTCCAGGAGCAGGAAGCACATGCTGCAGAGGTAATATACTAAACATGATTTCTTTGTTCACGTTTACCTCATCCTTGATGAATAGTTAGTGATCATTATTACACTACACTTACGAGCTTTCTCATAACTTCTCGCAGTTCGAGCGCACCTTTATAGCCATCAAGCCAGATGGCGTACAGAGAGGGCTGGTAAGACTATACTATCCTTGCGACGTTTTTCTTAATGCCAATTCTGATTTGATATTTGACAGCTCTATTTTATTACACTTACATCTGGTATTGGTATACAAGATTTCTATTATTCCTCAGTGGTCTATTCCAGCCCTTAAAAGGATAAGCTGGAAAAAAAAAAAGAAAAAAAAAGCTTCTTCTACTCTGTATTGATTTTTACTTTTTGCCTGATTGGGAAGGGTGTTCGTATATTTATCTGATCCAATACTTGTACTATGTAACAGATAGCAGAAATCATATCCCGTTTTGAGAGGAAAGGATTTAAACTTGTAGGCATTAAAGTTATTATTCCTTCAAAGGAATTTGCTCAGAGGCATTATCATGATCTGAAGGAAAGACCCTTCTTTAATGGCCTCTGTGAATTTCTTAGCTCTGGCCCCGTCATCGCAATGGTCAGTAAGAACCGGAAATTTCTCTGTGTGTAACTGCAACTGCTTTTGAGCTTGGATGAACCTTAAGTTTTTTAATTCTACAGGTTTGGGAAGGTGAGGGAGTGATCAGATATGGACGAAAACTTATTGGAGCAACAGATCCACAGAAATCTGAGCCCGGAACCATTAGAGGAGATCTAGCTGTTATTGTTGGCAGGTAATGCCTTATTACTTACTCCATAGTCATTTGGTGAATATAGTTAGAACACATATTTAAGGAAATGAAACAGAGCATGAGAATCACTCTCTACACCAACTTCCCCAATCAAGATTATCATTCGTGCATTTCATCATTCATGGGGATTCTCATTTCAAACATTGAAATATATCAAAATTTAATTGATTGAAAAACATTTTCAGTTCCCAAACTTCATGGAAAGTAATAATTCAATCTTTAAACTTGTTTGTAACACTTCCGTCTATTTTGTTTACTTAACGTTAATATATAATAACCATGTTTATTCTTCATATCCTATAAACCAATGAACCAAAGACCATGTATGTCATAGAAGACGACTGGCCAATGATTCCTATTGGTCAACCTATATCTTAGTTTACTTGTGAATGAATTTTGAATAATGATAAAACAGGATTTAGAAGTGATCTTGGCTTCCAAAATCCCTCCTTAAACTTGTTTGATTGTGTAATATATACAGGAACATCATCCATGGAAGCGATGGACCAGAGACTGCGGTAGATGAGATCAAGTTGTGGTTCAAACCAGAGGAATTGGTTAGCTACACAAGCAACTCAGAGAAATGGGTGTATGGAGACTGATGAGTTTTCCTTTCCCTCTCTTTTTTGTTAAACTTCTTTCTGCTTTAACTCGAGGTAGACAACAGCACCCGTGAAGAGCGGCGGGTATTTTCAGAATTCTGCGAATAAAATATGTCCTGTGCTGAGACGAGGCTATGGGCTCATCCATCCATAGTGCGAAAAAACAAACAGTTTTTGAGAGTCTTACTTATGACAAACAGTTGGTACAACTTCGTTTCTGAGATAATAAGCAGATCTTGATTCCTTCTTTATTACAACTTTCTCTTTCCATTTTCTTTTGTACTCATGTTATATTAGTGGGAGAAGTTCATGAAGACTTCACCATAATTTCTTTTCATGTGCATTTTAGGATAATTATCTGGTTAAGTTGTTAAATTGTAGCAGCAATAAGTGATTAATTAATAGGAAATGAGAAGCACTAAATGAAAAGTCAATAAAGTAATATCAAGTTTTGAACTCAATGCGAGAGGACTAGTTTTTTCCTCT TGTGCGAGTTCTTAAACCAAACGGCAGTTAGAGTCGGAGACGACGGTGACGGAAACGCATCGCATTGGTATTCGCGTCTCTTCTCAACGGCCTTTGCGTACCTTTTAACCTAACCACACAAAACTTCAACAACCAATCTCTCTCTTCCATATAAACCCCTCTTTCTCTCTCCCCCTTTCACTTCACACCAACCACCACTCTCTCCGCTCAAATTTCCCTCTTCACTTCTTCTCTATCAATATGAGTTCCAACATCTGTAGATCTGCTTCTAGAGCCGCCAGGTCCATCCTCGCCGCTTCCCGGACCTCTCGCTCTTATTCCGCTGGTGGAAGAGTCGTAGGTTCCGCTGCTGCAGTGACGCTAAGGGAAAAGTCCTCTTCTCTTGCTTCAATCTATGAAAATGCCGGTTCAGCATACGCATCTAGAGGATGGATTTCAGGATTGCTTGCCCTTCCTGCCGCAGCTTACATGCTCCAGGAGCAGGAAGCACATGCTGCAGAGTTCGAGCGCACCTTTATAGCCATCAAGCCAGATGGCGTACAGAGAGGGCTGATAGCAGAAATCATATCCCGTTTTGAGAGGAAAGGATTTAAACTTGTAGGCATTAAAGTTATTATTCCTTCAAAGGAATTTGCTCAGAGGCATTATCATGATCTGAAGGAAAGACCCTTCTTTAATGGCCTCTGTGAATTTCTTAGCTCTGGCCCCGTCATCGCAATGGTTTGGGAAGGTGAGGGAGTGATCAGATATGGACGAAAACTTATTGGAGCAACAGATCCACAGAAATCTGAGCCCGGAACCATTAGAGGAGATCTAGCTGTTATTGTTGGCAGGAACATCATCCATGGAAGCGATGGACCAGAGACTGCGGTAGATGAGATCAAGTTGTGGTTCAAACCAGAGGAATTGGTTAGCTACACAAGCAACTCAGAGAAATGGGTGTATGGAGACTGATGAGTTTTCCTTTCCCTCTCTTTTTTGTTAAACTTCTTTCTGCTTTAACTCGAGGTAGACAACAGCACCCGTGAAGAGCGGCGGGTATTTTCAGAATTCTGCGAATAAAATATGTCCTGTGCTGAGACGAGGCTATGGGCTCATCCATCCATAGTGCGAAAAAACAAACAGTTTTTGAGAGTCTTACTTATGACAAACAGTTGGTACAACTTCGTTTCTGAGATAATAAGCAGATCTTGATTCCTTCTTTATTACAACTTTCTCTTTCCATTTTCTTTTGTACTCATGTTATATTAGTGGGAGAAGTTCATGAAGACTTCACCATAATTTCTTTTCATGTGCATTTTAGGATAATTATCTGGTTAAGTTGTTAAATTGTAGCAGCAATAAGTGATTAATTAATAGGAAATGAGAAGCACTAAATGAAAAGTCAATAAAGTAATATCAAGTTTTGAACTCAATGCGAGAGGACTAGTTTTTTCCTCT ATGAGTTCCAACATCTGTAGATCTGCTTCTAGAGCCGCCAGGTCCATCCTCGCCGCTTCCCGGACCTCTCGCTCTTATTCCGCTGGTGGAAGAGTCGTAGGTTCCGCTGCTGCAGTGACGCTAAGGGAAAAGTCCTCTTCTCTTGCTTCAATCTATGAAAATGCCGGTTCAGCATACGCATCTAGAGGATGGATTTCAGGATTGCTTGCCCTTCCTGCCGCAGCTTACATGCTCCAGGAGCAGGAAGCACATGCTGCAGAGTTCGAGCGCACCTTTATAGCCATCAAGCCAGATGGCGTACAGAGAGGGCTGATAGCAGAAATCATATCCCGTTTTGAGAGGAAAGGATTTAAACTTGTAGGCATTAAAGTTATTATTCCTTCAAAGGAATTTGCTCAGAGGCATTATCATGATCTGAAGGAAAGACCCTTCTTTAATGGCCTCTGTGAATTTCTTAGCTCTGGCCCCGTCATCGCAATGGTTTGGGAAGGTGAGGGAGTGATCAGATATGGACGAAAACTTATTGGAGCAACAGATCCACAGAAATCTGAGCCCGGAACCATTAGAGGAGATCTAGCTGTTATTGTTGGCAGGAACATCATCCATGGAAGCGATGGACCAGAGACTGCGGTAGATGAGATCAAGTTGTGGTTCAAACCAGAGGAATTGGTTAGCTACACAAGCAACTCAGAGAAATGGGTGTATGGAGACTGA MSSNICRSASRAARSILAASRTSRSYSAGGRVVGSAAAVTLREKSSSLASIYENAGSAYASRGWISGLLALPAAAYMLQEQEAHAAEFERTFIAIKPDGVQRGLIAEIISRFERKGFKLVGIKVIIPSKEFAQRHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVIRYGRKLIGATDPQKSEPGTIRGDLAVIVGRNIIHGSDGPETAVDEIKLWFKPEELVSYTSNSEKWVYGD
BLAST of Cp4.1LG01g00480 vs. Swiss-Prot
Match: NDK3_ARATH (Nucleoside diphosphate kinase III, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDPK3 PE=1 SV=1) HSP 1 Score: 368.6 bits (945), Expect = 5.0e-101 Identity = 186/238 (78.15%), Postives = 213/238 (89.50%), Query Frame = 1
BLAST of Cp4.1LG01g00480 vs. Swiss-Prot
Match: NDK4_ARATH (Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDK4 PE=1 SV=2) HSP 1 Score: 366.3 bits (939), Expect = 2.5e-100 Identity = 182/236 (77.12%), Postives = 208/236 (88.14%), Query Frame = 1
BLAST of Cp4.1LG01g00480 vs. Swiss-Prot
Match: NDK4_SPIOL (Nucleoside diphosphate kinase 4, chloroplastic OS=Spinacia oleracea GN=NDK4 PE=1 SV=1) HSP 1 Score: 351.7 bits (901), Expect = 6.4e-96 Identity = 179/238 (75.21%), Postives = 206/238 (86.55%), Query Frame = 1
BLAST of Cp4.1LG01g00480 vs. Swiss-Prot
Match: NDK3_SPIOL (Nucleoside diphosphate kinase 3 OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 2.2e-72 Identity = 125/152 (82.24%), Postives = 141/152 (92.76%), Query Frame = 1
BLAST of Cp4.1LG01g00480 vs. Swiss-Prot
Match: NDK_PROMT (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain NATL2A) GN=ndk PE=3 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 1.9e-55 Identity = 100/145 (68.97%), Postives = 120/145 (82.76%), Query Frame = 1
BLAST of Cp4.1LG01g00480 vs. TrEMBL
Match: A0A0A0KX20_CUCSA (Nucleoside diphosphate kinase OS=Cucumis sativus GN=Csa_4G052590 PE=3 SV=1) HSP 1 Score: 418.7 bits (1075), Expect = 4.7e-114 Identity = 211/237 (89.03%), Postives = 221/237 (93.25%), Query Frame = 1
BLAST of Cp4.1LG01g00480 vs. TrEMBL
Match: A0A059C2N4_EUCGR (Nucleoside diphosphate kinase OS=Eucalyptus grandis GN=EUGRSUZ_E00871 PE=3 SV=1) HSP 1 Score: 384.8 bits (987), Expect = 7.6e-104 Identity = 190/237 (80.17%), Postives = 216/237 (91.14%), Query Frame = 1
BLAST of Cp4.1LG01g00480 vs. TrEMBL
Match: M5WAF8_PRUPE (Nucleoside diphosphate kinase OS=Prunus persica GN=PRUPE_ppa010725mg PE=3 SV=1) HSP 1 Score: 377.9 bits (969), Expect = 9.3e-102 Identity = 190/237 (80.17%), Postives = 207/237 (87.34%), Query Frame = 1
BLAST of Cp4.1LG01g00480 vs. TrEMBL
Match: D5ILC3_SOLTU (Nucleoside diphosphate kinase OS=Solanum tuberosum GN=NDPK1 PE=3 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 1.6e-101 Identity = 194/239 (81.17%), Postives = 214/239 (89.54%), Query Frame = 1
BLAST of Cp4.1LG01g00480 vs. TrEMBL
Match: A0A0V0HJP7_SOLCH (Nucleoside diphosphate kinase OS=Solanum chacoense PE=3 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 1.6e-101 Identity = 194/239 (81.17%), Postives = 214/239 (89.54%), Query Frame = 1
BLAST of Cp4.1LG01g00480 vs. TAIR10
Match: AT4G11010.1 (AT4G11010.1 nucleoside diphosphate kinase 3) HSP 1 Score: 368.6 bits (945), Expect = 2.8e-102 Identity = 186/238 (78.15%), Postives = 213/238 (89.50%), Query Frame = 1
BLAST of Cp4.1LG01g00480 vs. TAIR10
Match: AT4G23900.1 (AT4G23900.1 Nucleoside diphosphate kinase family protein) HSP 1 Score: 366.3 bits (939), Expect = 1.4e-101 Identity = 182/236 (77.12%), Postives = 208/236 (88.14%), Query Frame = 1
BLAST of Cp4.1LG01g00480 vs. TAIR10
Match: AT4G09320.1 (AT4G09320.1 Nucleoside diphosphate kinase family protein) HSP 1 Score: 191.0 bits (484), Expect = 8.1e-49 Identity = 86/147 (58.50%), Postives = 113/147 (76.87%), Query Frame = 1
BLAST of Cp4.1LG01g00480 vs. TAIR10
Match: AT5G63310.1 (AT5G63310.1 nucleoside diphosphate kinase 2) HSP 1 Score: 189.1 bits (479), Expect = 3.1e-48 Identity = 86/152 (56.58%), Postives = 107/152 (70.39%), Query Frame = 1
BLAST of Cp4.1LG01g00480 vs. TAIR10
Match: AT1G17410.1 (AT1G17410.1 Nucleoside diphosphate kinase family protein) HSP 1 Score: 86.3 bits (212), Expect = 2.8e-17 Identity = 52/138 (37.68%), Postives = 68/138 (49.28%), Query Frame = 1
BLAST of Cp4.1LG01g00480 vs. NCBI nr
Match: gi|449462537|ref|XP_004148997.1| (PREDICTED: nucleoside diphosphate kinase 3-like [Cucumis sativus]) HSP 1 Score: 418.7 bits (1075), Expect = 6.8e-114 Identity = 211/237 (89.03%), Postives = 221/237 (93.25%), Query Frame = 1
BLAST of Cp4.1LG01g00480 vs. NCBI nr
Match: gi|659102101|ref|XP_008451953.1| (PREDICTED: nucleoside diphosphate kinase 3-like [Cucumis melo]) HSP 1 Score: 415.6 bits (1067), Expect = 5.8e-113 Identity = 207/237 (87.34%), Postives = 220/237 (92.83%), Query Frame = 1
BLAST of Cp4.1LG01g00480 vs. NCBI nr
Match: gi|729295889|ref|XP_010541737.1| (PREDICTED: nucleoside diphosphate kinase IV, chloroplastic/mitochondrial [Tarenaya hassleriana]) HSP 1 Score: 385.6 bits (989), Expect = 6.4e-104 Identity = 189/236 (80.08%), Postives = 216/236 (91.53%), Query Frame = 1
BLAST of Cp4.1LG01g00480 vs. NCBI nr
Match: gi|629107275|gb|KCW72421.1| (hypothetical protein EUGRSUZ_E00871 [Eucalyptus grandis]) HSP 1 Score: 384.8 bits (987), Expect = 1.1e-103 Identity = 190/237 (80.17%), Postives = 216/237 (91.14%), Query Frame = 1
BLAST of Cp4.1LG01g00480 vs. NCBI nr
Match: gi|823177057|ref|XP_012486660.1| (PREDICTED: nucleoside diphosphate kinase 3-like isoform X1 [Gossypium raimondii]) HSP 1 Score: 378.6 bits (971), Expect = 7.8e-102 Identity = 186/235 (79.15%), Postives = 210/235 (89.36%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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