Cucsa.111350 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GACGAAGAACTTTCCTCTCTAGACGAAGTGAATAACGATGAGCTCACTCACTGTGGCAGCTTCCTCTTTCAGCTCCTTCTCCTTAACCCGGTTCGCTCACAGTTCATCCAACAACTCTCTCATCCCCCCAAAAGTCCTTCTCAAAGTCCCTTTAAATGCCAACTCCCAATCTTCGATTTCCTTCAAATCTTCAAATACGCCTTCAATTTACCGGTTTCCGAGTTTGAAAACCTGCGCAGCTTTAGACGGAAAAGACCCAAATGGAGCGACCCCAGTTCTGGTTGAGGAAGAGAGTTCCACTTCCAGCAATGTATTAGATGTTTTTTACTTTTGATATTTCTCTTGTGGTTAAGTTTTTTtGTTAGTGTGTTGATTTTTCTATTTACATATTCAATGAGGTTGATATTATTTCTATTTAAGCTCTGTTGGGTTATTGCCGAATGGCACGAAGGATGGCATATTATAGGAGTTCAATTATGTTCTTATTGAAATGGTGTATTGCATAATAAAGTACGTTCTGTTCTTTAGGCTGTTTGGTCAACAGTATCCACAGTTCTGTATCTGTTCTTGTAGATGATACAATACCAAATGCTTTTTAATCAATAGATGGTTTAATATGTATTGACATACCACAAAGAGCCTAAACAGACATTTGATGCAAAAATTCAAATCCGATCCAAAAATGGTGATCCTTAGTAATTACTATCTTTAGGGGCATGCTGAGGATCCCATGGAGTAATTCAAGGGACCTTATAATATTTATTCCATTGATGGAGTAACCACCTATTGTCAATTGTCAGTTGTTTTCGTGGACTTCAATTTCGAAGATTTTTTGTAACTACCCGACATTCTTTTGCATAGTTGGAGTCCCTTTTTGTCGAAGGTCCTCTCTTTTGTGGGTTTGATTTTTTGTTTGTCCGTGCTTGTATTCTTTCATTTTTTTCAATGAAAGTGGTTATTTCTATTAAAAGAAAAAaGACTATATAATCTATTTGACTAATTGATTTGTGTAGATTGTGAATGAGGAAGTGGAAAAGAGCGTTAAAGTGCTAAAAAATGCGGCAAAGACAAGAAAGGTACCAGCAGAAGAAGTTTTGTCTGCTTTTTCTGTACTTGAGAAGGCTAAACTTGACCCTTCAAAGTTTTTTAATACACTTGGTGGAACAAGCTCTCCTGGTAGAACCTGGATGCTTATTTTTACTGCTGAGGTTGATTTTATTTCCATTTCATTTTCTAATTAAGAAGATTTAATCACTCCCGTTTTGGAGTTTTCTAAACACTGGATTTTAGTACTGAATTGCAGAAAAAATTGAAAAAGGGTCGCTACTTCCCTGTTACAGCCATCCAGAGGTTTGATGCTGCTGTACGTATATCTATCTTTCTATCTGGACTTTGCTATATGATTTCTCCTCTGATAAGATTGCAAGAAGTTATAACTTAGCAAACCTTATTGTGCACTTGGAACAAAAGTTTAGGGATGCTCTCGTTGATTTTCCAGATCTTTTTTtCCTGAAACTAATTCATCATTGCCTGGATTTAGGGAAAAAGAATAGAGAATGGAGTGTTTCTGGGACCTATTGGAAGCTTAACGTTCGAAGGTAGACTTTCATGGAAGACAAGAATACTAGCGTTCATTTTCGAACGAGTTCGAATAAAAATTGGACCTTTAAACCCTTTAGAGATTAGTCTTGGTCAAAAAGAAGAAAGGGAGCCAAGCACCAAGGATCCTTGCTTTATCTGGTTTTATGTTGATGAGGAAATAGCTGTTGCTCGTGGTAGAAGTGGGGGAACTGCATTTTGGTGCCGGTGTCGCCGTGTCAATACTTAGTTCTTTTCTCCATCAGATATTTGATCTTCTGCTTTGTACATGTCGAATTTGTATGCTTGTATCAAATTATCATGTACCTCGACGCTGTCATATTCAAATGTTCAATGTGCTATATTTATTAAGAACGTGTACATCCTTTGAACTACCTTCTCTCATTTGAAAGTTTGCAATTGGCATAGAAACCTTTCGAATTGGTCTACATGAGTTTCACTTCATCTGTCCTATTTGCCAACTCTGAACGAAT GACGAAGAACTTTCCTCTCTAGACGAAGTGAATAACGATGAGCTCACTCACTGTGGCAGCTTCCTCTTTCAGCTCCTTCTCCTTAACCCGGTTCGCTCACAGTTCATCCAACAACTCTCTCATCCCCCCAAAAGTCCTTCTCAAAGTCCCTTTAAATGCCAACTCCCAATCTTCGATTTCCTTCAAATCTTCAAATACGCCTTCAATTTACCGGTTTCCGAGTTTGAAAACCTGCGCAGCTTTAGACGGAAAAGACCCAAATGGAGCGACCCCAGTTCTGGTTGAGGAAGAGAGTTCCACTTCCAGCAATATTGTGAATGAGGAAGTGGAAAAGAGCGTTAAAGTGCTAAAAAATGCGGCAAAGACAAGAAAGGTACCAGCAGAAGAAGTTTTGTCTGCTTTTTCTGTACTTGAGAAGGCTAAACTTGACCCTTCAAAGTTTTTTAATACACTTGGTGGAACAAGCTCTCCTGGTAGAACCTGGATGCTTATTTTTACTGCTGAGAAAAAATTGAAAAAGGGTCGCTACTTCCCTGTTACAGCCATCCAGAGGTTTGATGCTGCTGGAAAAAGAATAGAGAATGGAGTGTTTCTGGGACCTATTGGAAGCTTAACGTTCGAAGGTAGACTTTCATGGAAGACAAGAATACTAGCGTTCATTTTCGAACGAGTTCGAATAAAAATTGGACCTTTAAACCCTTTAGAGATTAGTCTTGGTCAAAAAGAAGAAAGGGAGCCAAGCACCAAGGATCCTTGCTTTATCTGGTTTTATGTTGATGAGGAAATAGCTGTTGCTCGTGGTAGAAGTGGGGGAACTGCATTTTGGTGCCGGTGTCGCCGTGTCAATACTTAGTTCTTTTCTCCATCAGATATTTGATCTTCTGCTTTGTACATGTCGAATTTGTATGCTTGTATCAAATTATCATGTACCTCGACGCTGTCATATTCAAATGTTCAATGTGCTATATTTATTAAGAACGTGTACATCCTTTGAACTACCTTCTCTCATTTGAAAGTTTGCAATTGGCATAGAAACCTTTCGAATTGGTCTACATGAGTTTCACTTCATCTGTCCTATTTGCCAACTCTGAACGAAT ATGAGCTCACTCACTGTGGCAGCTTCCTCTTTCAGCTCCTTCTCCTTAACCCGGTTCGCTCACAGTTCATCCAACAACTCTCTCATCCCCCCAAAAGTCCTTCTCAAAGTCCCTTTAAATGCCAACTCCCAATCTTCGATTTCCTTCAAATCTTCAAATACGCCTTCAATTTACCGGTTTCCGAGTTTGAAAACCTGCGCAGCTTTAGACGGAAAAGACCCAAATGGAGCGACCCCAGTTCTGGTTGAGGAAGAGAGTTCCACTTCCAGCAATATTGTGAATGAGGAAGTGGAAAAGAGCGTTAAAGTGCTAAAAAATGCGGCAAAGACAAGAAAGGTACCAGCAGAAGAAGTTTTGTCTGCTTTTTCTGTACTTGAGAAGGCTAAACTTGACCCTTCAAAGTTTTTTAATACACTTGGTGGAACAAGCTCTCCTGGTAGAACCTGGATGCTTATTTTTACTGCTGAGAAAAAATTGAAAAAGGGTCGCTACTTCCCTGTTACAGCCATCCAGAGGTTTGATGCTGCTGGAAAAAGAATAGAGAATGGAGTGTTTCTGGGACCTATTGGAAGCTTAACGTTCGAAGGTAGACTTTCATGGAAGACAAGAATACTAGCGTTCATTTTCGAACGAGTTCGAATAAAAATTGGACCTTTAAACCCTTTAGAGATTAGTCTTGGTCAAAAAGAAGAAAGGGAGCCAAGCACCAAGGATCCTTGCTTTATCTGGTTTTATGTTGATGAGGAAATAGCTGTTGCTCGTGGTAGAAGTGGGGGAACTGCATTTTGGTGCCGGTGTCGCCGTGTCAATACTTAG MSSLTVAASSFSSFSLTRFAHSSSNNSLIPPKVLLKVPLNANSQSSISFKSSNTPSIYRFPSLKTCAALDGKDPNGATPVLVEEESSTSSNIVNEEVEKSVKVLKNAAKTRKVPAEEVLSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT*
BLAST of Cucsa.111350 vs. TrEMBL
Match: A0A0A0LPV7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G024850 PE=4 SV=1) HSP 1 Score: 529.6 bits (1363), Expect = 2.2e-147 Identity = 270/271 (99.63%), Postives = 270/271 (99.63%), Query Frame = 1
BLAST of Cucsa.111350 vs. TrEMBL
Match: A0A067KSD2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05352 PE=4 SV=1) HSP 1 Score: 338.2 bits (866), Expect = 9.3e-90 Identity = 176/273 (64.47%), Postives = 211/273 (77.29%), Query Frame = 1
BLAST of Cucsa.111350 vs. TrEMBL
Match: B9I2H3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s04760g PE=4 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 7.4e-87 Identity = 178/277 (64.26%), Postives = 207/277 (74.73%), Query Frame = 1
BLAST of Cucsa.111350 vs. TrEMBL
Match: A0A0B0PYU4_GOSAR (Microbial collagenase OS=Gossypium arboreum GN=F383_16160 PE=4 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 4.8e-86 Identity = 172/261 (65.90%), Postives = 197/261 (75.48%), Query Frame = 1
BLAST of Cucsa.111350 vs. TrEMBL
Match: B9T2Q7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0243940 PE=4 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 2.4e-85 Identity = 168/264 (63.64%), Postives = 205/264 (77.65%), Query Frame = 1
BLAST of Cucsa.111350 vs. TAIR10
Match: AT1G18060.1 (AT1G18060.1 unknown protein) HSP 1 Score: 291.2 bits (744), Expect = 6.6e-79 Identity = 138/179 (77.09%), Postives = 158/179 (88.27%), Query Frame = 1
BLAST of Cucsa.111350 vs. NCBI nr
Match: gi|449439107|ref|XP_004137329.1| (PREDICTED: uncharacterized protein LOC101217184 [Cucumis sativus]) HSP 1 Score: 529.6 bits (1363), Expect = 3.1e-147 Identity = 270/271 (99.63%), Postives = 270/271 (99.63%), Query Frame = 1
BLAST of Cucsa.111350 vs. NCBI nr
Match: gi|659106855|ref|XP_008453454.1| (PREDICTED: uncharacterized protein LOC103494159 [Cucumis melo]) HSP 1 Score: 506.9 bits (1304), Expect = 2.2e-140 Identity = 257/271 (94.83%), Postives = 260/271 (95.94%), Query Frame = 1
BLAST of Cucsa.111350 vs. NCBI nr
Match: gi|802599723|ref|XP_012072560.1| (PREDICTED: uncharacterized protein LOC105634328 [Jatropha curcas]) HSP 1 Score: 338.2 bits (866), Expect = 1.3e-89 Identity = 176/273 (64.47%), Postives = 211/273 (77.29%), Query Frame = 1
BLAST of Cucsa.111350 vs. NCBI nr
Match: gi|224118714|ref|XP_002317888.1| (hypothetical protein POPTR_0012s04760g [Populus trichocarpa]) HSP 1 Score: 328.6 bits (841), Expect = 1.1e-86 Identity = 178/277 (64.26%), Postives = 207/277 (74.73%), Query Frame = 1
BLAST of Cucsa.111350 vs. NCBI nr
Match: gi|743890614|ref|XP_011039098.1| (PREDICTED: uncharacterized protein LOC105135767 isoform X1 [Populus euphratica]) HSP 1 Score: 327.4 bits (838), Expect = 2.4e-86 Identity = 178/276 (64.49%), Postives = 205/276 (74.28%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |