CsaV3_1G004140 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AATCAATCAAAATTTCCATTTGAAGAAAAATAAAGAACCGTTCATATTCATCAAATCAGAGGATTGTTGGCAATCATGGCTTACGAGGATTTGATCCTCACCAGATATTTGTATGGGTTAAAGGAAGACGAAGAACCTTCCTCTCTAGACGAAGTGAATAACGATGAGCTCACTCACTGTGGCAGCTTCCTCTTTCAGCTCCTTCTCCTTAACCCGGTTCGCTCACAGTTCATCCAACAACTCTCTCATCCCCCCAAAAGTCCTTAAAGTCCCTTTGAATGCCAACTCCCAATCTTCGATTTCCTTCAAATCTTCAAATACGCCTTCAATTTACCGGTTTCCGAGTTTGAAAACCTGCGCAGCTTTAGACGGAAAAGACCCAAATGGAGCGACCCCAGTTCTGGTTGAGGAAGAGAGTTCCACTTCAAGCAATGTATTAGATGTTTTTTACTTTTGATATTTCTCTTGTGGTTAAGTTTTTTTGTTAGTGTGTTGATTTTTCTATTTACATATTCAATGAGGTTGATATTATTTCTATTTAAGCTCTGTTGGGTTATTGCCGAATGGCACGAAGGATGGCATATTATAGAAGTTCAATTATGTTCTTATTGAAATGGTGTATTGCATAATAAAGTACGTTCTGTTCTTTAGGCTGTTTGGTCAACAGTATCCACAGTTCTGTATCTGTTCTTGTAGATGATACAATACCAAATGCTTTTTAATCAATAGATGGTTTATTATGTTATGACATACCACAAAGAGCCTAAACAGACATTTGATACAAAAATTCAAATCCGATCCAAAAATGGTGATCCTGAGTAATTACTATCTTTAGGGGCATGCTGAGGATCCCATGGAGTAATTCAAGGGACCTTATAATATTTATTCCATTGATGGAGTAACCACCTATTGTCAATTGTCAGTTGTTTTCGTGGACTTCAATTTCGAAGATTTTTTGTAACTACCCGACATTCTTTTGCATAGTTGGAGTCCCTTTTTGTCGAAGGTCCTCTCTTTTGTGGGTTTGATTTTTTGTTTGTCCGTGCTTGTATTCTTTCATTTTTTTCAATGAAAGTGGTTATTTCTATTAAAAGAAAAAAGACTATATAATTTATTTGACTAATTGATTTGTGTAGATTGTGAACGAGGAAGTGGAAAAGAGCGTTAAAGTGCTAAAAAATGCGGCAAAGACAAGAAAGGTACCAGCAGAAGAAGTTTTGTCTGCTTTTTCTGTACTTGAGAAGGCTAAACTTGACCCTTCAAAGTTTTTTAATACACTTGGTGGAACAAGCTCTCCTGGTAGAACCTGGATGCTTATTTTTACTGCTGAGGTTGATTTTATTTCCATTTCATTTTCTAATTAAGAAGATTTAATCACTCCCGTTTTGGAGTTTTCTAAACACTGGATTTTAGTACTGAATTGCAGAAAAAATTGAAAAAGGGTCGCTACTTCCCTGTTACAGCCATCCAGAGGTTTGATGCTGCTGTACGTATATCTATCTTTCTATCTGGACTTTGCTATACGATTTCTCCTCTGATAAGATTGCAAGAAGTTATAACTTAGCAAACCTTATTGTGCACTTGGAACAAAAGTTTAGGGATGCTCTCGTTGATTTTCCAGATCTTTTTTTCCTGAAACTAATTCATCATTGCCTGGATTTAGGGAAAAAGAATAGAGAATGGAGTGTTTCTGGGACCTATTGGAAGCTTAACGTTCGAAGGTAGACTTTCATGGAAGACAAGAATACTAGCGTTCATTTTCGAACGAGTTCGAATAAAAATTGGACCTTTAAACCCTTTAGAGATTAGTCTTGGTCAAAAAGAAGAAAGGGAGCCAAGCACCAAGGATCCTTGCTTTATCTGGTTTTATGTTGATGAGGAAATAGCTGTTGCTCGTGGTAGAAGTGGGGGAACTGCATTTTGGTGCCGGTGTCGCCGTGTCAATACTTAGTTCTTTTCTCCATCAGATATTTGATCTTCTGCTTTGTACATGTCGAATTTGTATGCTTGTATCAAATTATCATGTACCTCGACGCTGTCATATTCAAATGTTCAATGTGCTATATTTATTAAGAACGTGTACATCCTTTGAACTACCTTCTCTCATTTGAAAGTTTGCAATTGGCATAGAAACCTTTCGAATTGGTCTACATGAGTTTCACTTCATCTGTCCTATTTGCCAACTCTGAACGAATCAATTATTTATTTATATAGAGCATACTATTTGCTCCAGCAGAAAGTTTATTATGATT ATGAGCTCACTCACTGTGGCAGCTTCCTCTTTCAGCTCCTTCTCCTTAACCCGGTTCGCTCACAGTTCATCCAACAACTCTCTCATCCCCCCAAAAGTCCTTAAAGTCCCTTTGAATGCCAACTCCCAATCTTCGATTTCCTTCAAATCTTCAAATACGCCTTCAATTTACCGGTTTCCGAGTTTGAAAACCTGCGCAGCTTTAGACGGAAAAGACCCAAATGGAGCGACCCCAGTTCTGGTTGAGGAAGAGAGTTCCACTTCAAGCAATATTGTGAACGAGGAAGTGGAAAAGAGCGTTAAAGTGCTAAAAAATGCGGCAAAGACAAGAAAGGTACCAGCAGAAGAAGTTTTGTCTGCTTTTTCTGTACTTGAGAAGGCTAAACTTGACCCTTCAAAGTTTTTTAATACACTTGGTGGAACAAGCTCTCCTGGTAGAACCTGGATGCTTATTTTTACTGCTGAGAAAAAATTGAAAAAGGGTCGCTACTTCCCTGTTACAGCCATCCAGAGGTTTGATGCTGCTGGAAAAAGAATAGAGAATGGAGTGTTTCTGGGACCTATTGGAAGCTTAACGTTCGAAGGTAGACTTTCATGGAAGACAAGAATACTAGCGTTCATTTTCGAACGAGTTCGAATAAAAATTGGACCTTTAAACCCTTTAGAGATTAGTCTTGGTCAAAAAGAAGAAAGGGAGCCAAGCACCAAGGATCCTTGCTTTATCTGGTTTTATGTTGATGAGGAAATAGCTGTTGCTCGTGGTAGAAGTGGGGGAACTGCATTTTGGTGCCGGTGTCGCCGTGTCAATACTTAG ATGAGCTCACTCACTGTGGCAGCTTCCTCTTTCAGCTCCTTCTCCTTAACCCGGTTCGCTCACAGTTCATCCAACAACTCTCTCATCCCCCCAAAAGTCCTTAAAGTCCCTTTGAATGCCAACTCCCAATCTTCGATTTCCTTCAAATCTTCAAATACGCCTTCAATTTACCGGTTTCCGAGTTTGAAAACCTGCGCAGCTTTAGACGGAAAAGACCCAAATGGAGCGACCCCAGTTCTGGTTGAGGAAGAGAGTTCCACTTCAAGCAATATTGTGAACGAGGAAGTGGAAAAGAGCGTTAAAGTGCTAAAAAATGCGGCAAAGACAAGAAAGGTACCAGCAGAAGAAGTTTTGTCTGCTTTTTCTGTACTTGAGAAGGCTAAACTTGACCCTTCAAAGTTTTTTAATACACTTGGTGGAACAAGCTCTCCTGGTAGAACCTGGATGCTTATTTTTACTGCTGAGAAAAAATTGAAAAAGGGTCGCTACTTCCCTGTTACAGCCATCCAGAGGTTTGATGCTGCTGGAAAAAGAATAGAGAATGGAGTGTTTCTGGGACCTATTGGAAGCTTAACGTTCGAAGGTAGACTTTCATGGAAGACAAGAATACTAGCGTTCATTTTCGAACGAGTTCGAATAAAAATTGGACCTTTAAACCCTTTAGAGATTAGTCTTGGTCAAAAAGAAGAAAGGGAGCCAAGCACCAAGGATCCTTGCTTTATCTGGTTTTATGTTGATGAGGAAATAGCTGTTGCTCGTGGTAGAAGTGGGGGAACTGCATTTTGGTGCCGGTGTCGCCGTGTCAATACTTAG MSSLTVAASSFSSFSLTRFAHSSSNNSLIPPKVLKVPLNANSQSSISFKSSNTPSIYRFPSLKTCAALDGKDPNGATPVLVEEESSTSSNIVNEEVEKSVKVLKNAAKTRKVPAEEVLSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT
BLAST of CsaV3_1G004140 vs. NCBI nr
Match: XP_004137329.1 (PREDICTED: uncharacterized protein LOC101217184 [Cucumis sativus] >KGN63853.1 hypothetical protein Csa_1G024850 [Cucumis sativus]) HSP 1 Score: 528.1 bits (1359), Expect = 1.8e-146 Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0
BLAST of CsaV3_1G004140 vs. NCBI nr
Match: XP_008453454.1 (PREDICTED: uncharacterized protein LOC103494159 [Cucumis melo]) HSP 1 Score: 496.1 bits (1276), Expect = 7.4e-137 Identity = 257/271 (94.83%), Postives = 260/271 (95.94%), Query Frame = 0
BLAST of CsaV3_1G004140 vs. NCBI nr
Match: XP_023005200.1 (uncharacterized protein LOC111498299 [Cucurbita maxima]) HSP 1 Score: 401.0 bits (1029), Expect = 3.3e-108 Identity = 212/271 (78.23%), Postives = 230/271 (84.87%), Query Frame = 0
BLAST of CsaV3_1G004140 vs. NCBI nr
Match: XP_022929153.1 (uncharacterized protein LOC111435818 [Cucurbita moschata]) HSP 1 Score: 399.4 bits (1025), Expect = 9.5e-108 Identity = 212/271 (78.23%), Postives = 230/271 (84.87%), Query Frame = 0
BLAST of CsaV3_1G004140 vs. NCBI nr
Match: XP_023529441.1 (uncharacterized protein LOC111792300 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 398.7 bits (1023), Expect = 1.6e-107 Identity = 211/271 (77.86%), Postives = 230/271 (84.87%), Query Frame = 0
BLAST of CsaV3_1G004140 vs. TAIR10
Match: AT1G18060.1 (unknown protein) HSP 1 Score: 293.1 bits (749), Expect = 1.7e-79 Identity = 138/179 (77.09%), Postives = 158/179 (88.27%), Query Frame = 0
BLAST of CsaV3_1G004140 vs. TrEMBL
Match: tr|A0A0A0LPV7|A0A0A0LPV7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G024850 PE=4 SV=1) HSP 1 Score: 528.1 bits (1359), Expect = 1.2e-146 Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0
BLAST of CsaV3_1G004140 vs. TrEMBL
Match: tr|A0A1S3BXG3|A0A1S3BXG3_CUCME (uncharacterized protein LOC103494159 OS=Cucumis melo OX=3656 GN=LOC103494159 PE=4 SV=1) HSP 1 Score: 496.1 bits (1276), Expect = 4.9e-137 Identity = 257/271 (94.83%), Postives = 260/271 (95.94%), Query Frame = 0
BLAST of CsaV3_1G004140 vs. TrEMBL
Match: tr|A0A067KSD2|A0A067KSD2_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_05352 PE=4 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 3.8e-89 Identity = 177/272 (65.07%), Postives = 210/272 (77.21%), Query Frame = 0
BLAST of CsaV3_1G004140 vs. TrEMBL
Match: tr|A0A1R3G074|A0A1R3G074_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_37647 PE=4 SV=1) HSP 1 Score: 322.8 bits (826), Expect = 7.5e-85 Identity = 172/264 (65.15%), Postives = 202/264 (76.52%), Query Frame = 0
BLAST of CsaV3_1G004140 vs. TrEMBL
Match: tr|A0A2P5RBY0|A0A2P5RBY0_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA34481 PE=4 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 9.8e-85 Identity = 174/263 (66.16%), Postives = 199/263 (75.67%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |