Csa1G024850 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G024850
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	T10F20.7 protein
Location	Chr1 : 2566921 .. 2569118 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCATCAAATCAGAGGATTGTTGGCAATCATGGCTTACGAGGATTTGATCCTCACCAGATATTTGTATGGGTTAAAGGAAGACGAAGAACCTTCCTCTCTAGACGAAGTGAATAACGATGAGCTCACTCACTGTGGCAGCTTCCTCTTTCAGCTCCTTCTCCTTAACCCGGTTCGCTCACAGTTCATCCAACAACTCTCTCATCCCCCCAAAAGTCCTTAAAGTCCCTTTGAATGCCAACTCCCAATCTTCGATTTCCTTCAAATCTTCAAATACGCCTTCAATTTACCGGTTTCCGAGTTTGAAAACCTGCGCAGCTTTAGACGGAAAAGACCCAAATGGAGCGACCCCAGTTCTGGTTGAGGAAGAGAGTTCCACTTCAAGCAATGTATTAGATGTTTTTTACTTTTGATATTTCTCTTGTGGTTAAGTTTTTTTGTTAGTGTGTTGATTTTTCTATTTACATATTCAATGAGGTTGATATTATTTCTATTTAAGCTCTGTTGGGTTATTGCCGAATGGCACGAAGGATGGCATATTATAGAAGTTCAATTATGTTCTTATTGAAATGGTGTATTGCATAATAAAGTACGTTCTGTTCTTTAGGCTGTTTGGTCAACAGTATCCACAGTTCTGTATCTGTTCTTGTAGATGATACAATACCAAATGCTTTTTAATCAATAGATGGTTTATTATGTTATGACATACCACAAAGAGCCTAAACAGACATTTGATACAAAAATTCAAATCCGATCCAAAAATGGTGATCCTGAGTAATTACTATCTTTAGGGGCATGCTGAGGATCCCATGGAGTAATTCAAGGGACCTTATAATATTTATTCCATTGATGGAGTAACCACCTATTGTCAATTGTCAGTTGTTTTCGTGGACTTCAATTTCGAAGATTTTTTGTAACTACCCGACATTCTTTTGCATAGTTGGAGTCCCTTTTTGTCGAAGGTCCTCTCTTTTGTGGGTTTGATTTTTTGTTTGTCCGTGCTTGTATTCTTTCATTTTTTTCAATGAAAGTGGTTATTTCTATTAAAAGAAAAAAGACTATATAATTTATTTGACTAATTGATTTGTGTAGATTGTGAACGAGGAAGTGGAAAAGAGCGTTAAAGTGCTAAAAAATGCGGCAAAGACAAGAAAGGTACCAGCAGAAGAAGTTTTGTCTGCTTTTTCTGTACTTGAGAAGGCTAAACTTGACCCTTCAAAGTTTTTTAATACACTTGGTGGAACAAGCTCTCCTGGTAGAACCTGGATGCTTATTTTTACTGCTGAGGTTGATTTTATTTCCATTTCATTTTCTAATTAAGAAGATTTAATCACTCCCGTTTTGGAGTTTTCTAAACACTGGATTTTAGTACTGAATTGCAGAAAAAATTGAAAAAGGGTCGCTACTTCCCTGTTACAGCCATCCAGAGGTTTGATGCTGCTGTACGTATATCTATCTTTCTATCTGGACTTTGCTATACGATTTCTCCTCTGATAAGATTGCAAGAAGTTATAACTTAGCAAACCTTATTGTGCACTTGGAACAAAAGTTTAGGGATGCTCTCGTTGATTTTCCAGATCTTTTTTTCCTGAAACTAATTCATCATTGCCTGGATTTAGGGAAAAAGAATAGAGAATGGAGTGTTTCTGGGACCTATTGGAAGCTTAACGTTCGAAGGTAGACTTTCATGGAAGACAAGAATACTAGCGTTCATTTTCGAACGAGTTCGAATAAAAATTGGACCTTTAAACCCTTTAGAGATTAGTCTTGGTCAAAAAGAAGAAAGGGAGCCAAGCACCAAGGATCCTTGCTTTATCTGGTTTTATGTTGATGAGGAAATAGCTGTTGCTCGTGGTAGAAGTGGGGGAACTGCATTTTGGTGCCGGTGTCGCCGTGTCAATACTTAGTTCTTTTCTCCATCAGATATTTGATCTTCTGCTTTGTACATGTCGAATTTGTATGCTTGTATCAAATTATCATGTACCTCGACGCTGTCATATTCAAATGTTCAATGTGCTATATTTATTAAGAACGTGTACATCCTTTGAACTACCTTCTCTCATTTGAAAGTTTGCAATTGGCATAGAAACCTTTCGAATTGGTCTACATGAGTTTCACTTCATCTGTCCTATTTGCCAACTCTGAACGAATCAATTATTTATTTATATAGAGCATACTATTTGCTCCAGCAGAAAGTTTA

mRNA sequence

ATGAGCTCACTCACTGTGGCAGCTTCCTCTTTCAGCTCCTTCTCCTTAACCCGGTTCGCTCACAGTTCATCCAACAACTCTCTCATCCCCCCAAAAGTCCTTAAAGTCCCTTTGAATGCCAACTCCCAATCTTCGATTTCCTTCAAATCTTCAAATACGCCTTCAATTTACCGGTTTCCGAGTTTGAAAACCTGCGCAGCTTTAGACGGAAAAGACCCAAATGGAGCGACCCCAGTTCTGGTTGAGGAAGAGAGTTCCACTTCAAGCAATATTGTGAACGAGGAAGTGGAAAAGAGCGTTAAAGTGCTAAAAAATGCGGCAAAGACAAGAAAGGTACCAGCAGAAGAAGTTTTGTCTGCTTTTTCTGTACTTGAGAAGGCTAAACTTGACCCTTCAAAGTTTTTTAATACACTTGGTGGAACAAGCTCTCCTGGTAGAACCTGGATGCTTATTTTTACTGCTGAGAAAAAATTGAAAAAGGGTCGCTACTTCCCTGTTACAGCCATCCAGAGGTTTGATGCTGCTGGAAAAAGAATAGAGAATGGAGTGTTTCTGGGACCTATTGGAAGCTTAACGTTCGAAGGTAGACTTTCATGGAAGACAAGAATACTAGCGTTCATTTTCGAACGAGTTCGAATAAAAATTGGACCTTTAAACCCTTTAGAGATTAGTCTTGGTCAAAAAGAAGAAAGGGAGCCAAGCACCAAGGATCCTTGCTTTATCTGGTTTTATGTTGATGAGGAAATAGCTGTTGCTCGTGGTAGAAGTGGGGGAACTGCATTTTGGTGCCGGTGTCGCCGTGTCAATACTTAG

Coding sequence (CDS)

ATGAGCTCACTCACTGTGGCAGCTTCCTCTTTCAGCTCCTTCTCCTTAACCCGGTTCGCTCACAGTTCATCCAACAACTCTCTCATCCCCCCAAAAGTCCTTAAAGTCCCTTTGAATGCCAACTCCCAATCTTCGATTTCCTTCAAATCTTCAAATACGCCTTCAATTTACCGGTTTCCGAGTTTGAAAACCTGCGCAGCTTTAGACGGAAAAGACCCAAATGGAGCGACCCCAGTTCTGGTTGAGGAAGAGAGTTCCACTTCAAGCAATATTGTGAACGAGGAAGTGGAAAAGAGCGTTAAAGTGCTAAAAAATGCGGCAAAGACAAGAAAGGTACCAGCAGAAGAAGTTTTGTCTGCTTTTTCTGTACTTGAGAAGGCTAAACTTGACCCTTCAAAGTTTTTTAATACACTTGGTGGAACAAGCTCTCCTGGTAGAACCTGGATGCTTATTTTTACTGCTGAGAAAAAATTGAAAAAGGGTCGCTACTTCCCTGTTACAGCCATCCAGAGGTTTGATGCTGCTGGAAAAAGAATAGAGAATGGAGTGTTTCTGGGACCTATTGGAAGCTTAACGTTCGAAGGTAGACTTTCATGGAAGACAAGAATACTAGCGTTCATTTTCGAACGAGTTCGAATAAAAATTGGACCTTTAAACCCTTTAGAGATTAGTCTTGGTCAAAAAGAAGAAAGGGAGCCAAGCACCAAGGATCCTTGCTTTATCTGGTTTTATGTTGATGAGGAAATAGCTGTTGCTCGTGGTAGAAGTGGGGGAACTGCATTTTGGTGCCGGTGTCGCCGTGTCAATACTTAG

Protein sequence

MSSLTVAASSFSSFSLTRFAHSSSNNSLIPPKVLKVPLNANSQSSISFKSSNTPSIYRFPSLKTCAALDGKDPNGATPVLVEEESSTSSNIVNEEVEKSVKVLKNAAKTRKVPAEEVLSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT*

Homology

[Close]

BLAST of Csa1G024850 vs. TrEMBL
Match: A0A0A0LPV7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G024850 PE=4 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 8.8e-149
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 1


Query: 1   MSSLTVAASSFSSFSLTRFAHSSSNNSLIPPKVLKVPLNANSQSSISFKSSNTPSIYRFP 60
           MSSLTVAASSFSSFSLTRFAHSSSNNSLIPPKVLKVPLNANSQSSISFKSSNTPSIYRFP
Sbjct: 1   MSSLTVAASSFSSFSLTRFAHSSSNNSLIPPKVLKVPLNANSQSSISFKSSNTPSIYRFP 60

Query: 61  SLKTCAALDGKDPNGATPVLVEEESSTSSNIVNEEVEKSVKVLKNAAKTRKVPAEEVLSA 120
           SLKTCAALDGKDPNGATPVLVEEESSTSSNIVNEEVEKSVKVLKNAAKTRKVPAEEVLSA
Sbjct: 61  SLKTCAALDGKDPNGATPVLVEEESSTSSNIVNEEVEKSVKVLKNAAKTRKVPAEEVLSA 120

Query: 121 FSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIE 180
           FSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIE
Sbjct: 121 FSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIE 180

Query: 181 NGVFLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCF 240
           NGVFLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCF
Sbjct: 181 NGVFLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCF 240

Query: 241 IWFYVDEEIAVARGRSGGTAFWCRCRRVNT 271
           IWFYVDEEIAVARGRSGGTAFWCRCRRVNT
Sbjct: 241 IWFYVDEEIAVARGRSGGTAFWCRCRRVNT 270

[Close]

BLAST of Csa1G024850 vs. TrEMBL
Match: A0A067KSD2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05352 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 8.4e-91
Identity = 176/272 (64.71%), Postives = 210/272 (77.21%), Query Frame = 1


Query: 1   MSSLTVAASSFSSFSLTRFAHSSSNNSLIPPKVLKVPLNANSQSSISFKSSNTPSIYRFP 60
           M S  V +SS+  FS   F   +S  + +P K+  +PL+AN++ +       +  + +F 
Sbjct: 1   MGSQAVISSSY--FSCLSFVALNSFQARLPIKLSVLPLHANAKPT-------SHHLLKFQ 60

Query: 61  SLKTCAALDGKDPNGATPVLVEEESSTSSNIV--NEEVEKSVKVLKNAAKTRKVPAEEVL 120
            LKT A LD K+ N   P+L++E+          N EVEKSVKVLKNAAKTRKV  +EVL
Sbjct: 61  RLKTRATLDEKEQNAPNPLLIQEQEEEEKMQARSNLEVEKSVKVLKNAAKTRKVAKDEVL 120

Query: 121 SAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKR 180
           SA SV+EKAK+DPS F +TLGG+ SPGRTWML+FTAEK+LK GRYFP+TA+QRFDAAGKR
Sbjct: 121 SAMSVIEKAKIDPSGFLDTLGGSESPGRTWMLVFTAEKQLKGGRYFPLTAVQRFDAAGKR 180

Query: 181 IENGVFLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDP 240
           IENGV+LGPIG LTFEGR +WK RILAFIFER+RIKIGPLNPLEISLGQKE+REP+TKDP
Sbjct: 181 IENGVYLGPIGCLTFEGRFTWKKRILAFIFERIRIKIGPLNPLEISLGQKEDREPNTKDP 240

Query: 241 CFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT 271
            FIWFY+DEEIAVARGRSGGTAFWCRC RV T
Sbjct: 241 FFIWFYIDEEIAVARGRSGGTAFWCRCHRVTT 263

[Close]

BLAST of Csa1G024850 vs. TrEMBL
Match: B9I2H3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s04760g PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 7.4e-87
Identity = 178/277 (64.26%), Postives = 206/277 (74.37%), Query Frame = 1


Query: 1   MSSLTVAASSFSS----FSLTRFAHSSSNNSLIPPKV--LKVPLNANSQSSISFKSSNTP 60
           M S   AA+S+ S     +L     SS N S +P K      PL+++ +   S       
Sbjct: 1   MGSQATAAASYLSCINWVALNSSQISSLNPSFLPLKAETCHFPLHSDIKQDASSLKYPNL 60

Query: 61  SIYRFPSLKTCAALDGKDPNGATPVLVEEESSTSSNIV-NEEVEKSVKVLKNAAKTRKVP 120
            + +  +++T A LD   P    P+ V+EE         +EEV++SVKVLKNAAKTRKV 
Sbjct: 61  HLLKLRNVRTRATLDESAP---APIRVQEEEDEGPQPQPSEEVKESVKVLKNAAKTRKVA 120

Query: 121 AEEVLSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFD 180
           AE VLSA +V+EKAKLDPS F NTLGG+ SPGRTWMLIFTAEKKL +GRYFP+TAIQRFD
Sbjct: 121 AEVVLSALTVIEKAKLDPSGFLNTLGGSKSPGRTWMLIFTAEKKLDRGRYFPLTAIQRFD 180

Query: 181 AAGKRIENGVFLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREP 240
           AAGKRIENGV+LGPIG LTFEGRLSWK RILAFIFER+RIKIGPLNP EISLGQKE+REP
Sbjct: 181 AAGKRIENGVYLGPIGFLTFEGRLSWKNRILAFIFERMRIKIGPLNPFEISLGQKEDREP 240

Query: 241 STKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT 271
           STKDP FIWFY+DEE+AVARGRSGGTAFWCRCRRV T
Sbjct: 241 STKDPFFIWFYIDEELAVARGRSGGTAFWCRCRRVAT 274

[Close]

BLAST of Csa1G024850 vs. TrEMBL
Match: B9T2Q7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0243940 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.8e-85
Identity = 167/263 (63.50%), Postives = 202/263 (76.81%), Query Frame = 1


Query: 6   VAASSFSSFSLTRFAHSSSNNSLIPPKVLKVPLNANSQSSISFKSSNTPSIYRFPSLKTC 65
           +++S FSS SL     S  +     P +    ++AN+ SS+   S +   + R   LKT 
Sbjct: 9   LSSSFFSSLSLVALNSSQPSKLFRQPIIPFFSVHANATSSLKSTSYHNLKLRR---LKTR 68

Query: 66  AALDGKDPNGATPVLVEEESSTSSNIVNEEVEKSVKVLKNAAKTRKVPAEEVLSAFSVLE 125
           AALD KD   +T  LV+EE    +   + EVE+SVKVLKNAAKTRKVP  EVLSA SV+E
Sbjct: 69  AALDEKDQTLSTSFLVQEEQELQTQ-TDPEVEESVKVLKNAAKTRKVPVAEVLSALSVIE 128

Query: 126 KAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFL 185
           KA +DPS F +TLGG++SPGRTWMLIFTA+KKLK G+YFP+TA+QRFDAAGKRIENGV+ 
Sbjct: 129 KANVDPSTFLDTLGGSASPGRTWMLIFTAQKKLKSGKYFPLTAVQRFDAAGKRIENGVYF 188

Query: 186 GPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYV 245
           G +G LTFEGR +WK RILAFIFER+R+KIG LNPLEI+LGQK++REPSTKDP FIWFY+
Sbjct: 189 GSLGCLTFEGRFTWKKRILAFIFERIRVKIGLLNPLEINLGQKDDREPSTKDPFFIWFYI 248

Query: 246 DEEIAVARGRSGGTAFWCRCRRV 269
           DEEIAVARGRSGGTAFW RCRR+
Sbjct: 249 DEEIAVARGRSGGTAFWVRCRRI 267

[Close]

BLAST of Csa1G024850 vs. TrEMBL
Match: A0A0B0PYU4_GOSAR (Microbial collagenase OS=Gossypium arboreum GN=F383_16160 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.8e-85
Identity = 172/261 (65.90%), Postives = 197/261 (75.48%), Query Frame = 1


Query: 13  SFSLTRFAHSSSNNSLIPPKVLKVPLNANSQSSISFK-SSNTPSIYRFPSLK--TCAALD 72
           SFSL+  +  S   S  P  +   P     +   SF    + PS+    S K  T A LD
Sbjct: 9   SFSLSSLSCHSYRTSSSPRLLSLKPFLQPLKHLNSFNYHPHIPSLTSAKSFKSRTRATLD 68

Query: 73  GKDPNGATPVLVEEESSTSSNIVNEEVEKSVKVLKNAAKTRKVPAEEVLSAFSVLEKAKL 132
            K+ N   P L++E+        ++EVEKSVKVLKNAAKTRKVPAEEVLSAFSV+EKAK+
Sbjct: 69  EKEKN---PSLIQEQQP------DQEVEKSVKVLKNAAKTRKVPAEEVLSAFSVIEKAKI 128

Query: 133 DPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIG 192
           DPS F  TLGG  SPGRTWMLIFTAEKKLK GRYFP+TA+QRFDAAG+RIENGVFLGPIG
Sbjct: 129 DPSAFLETLGGLDSPGRTWMLIFTAEKKLKGGRYFPLTAVQRFDAAGRRIENGVFLGPIG 188

Query: 193 SLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWFYVDEEI 252
            LTFEG+ SWK RIL+FIFER+R+KIGP NPLEI LGQK++REP+TKDP FIWFY+DEEI
Sbjct: 189 FLTFEGKFSWKNRILSFIFERIRVKIGPFNPLEIGLGQKDDREPNTKDPFFIWFYIDEEI 248

Query: 253 AVARGRSGGTAFWCRCRRVNT 271
           AVARGRSGGTAFWCRC RV T
Sbjct: 249 AVARGRSGGTAFWCRCTRVTT 260

[Close]

BLAST of Csa1G024850 vs. TAIR10
Match: AT1G18060.1 (AT1G18060.1 unknown protein)

HSP 1 Score: 291.2 bits (744), Expect = 6.6e-79
Identity = 138/179 (77.09%), Postives = 156/179 (87.15%), Query Frame = 1


Query: 91  IVNEEVEKSVKVLKNAAKTRKVPAEEVLSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWML 150
           I N++V +SV VLK AAKTRKV A+E+L+AFS +EKAK+DPS F  TLGG  SPGRTWML
Sbjct: 46  IPNKQVTESVNVLKTAAKTRKVAADEILAAFSAIEKAKIDPSTFLETLGGPESPGRTWML 105

Query: 151 IFTAEKKLKKGRYFPVTAIQRFDAAGKRIENGVFLGPIGSLTFEGRLSWKTRILAFIFER 210
           IFTAEKKL KGRYFP+TA+QRFDAAGKRIENGV+LGP G+LTFEGR SWK RILAF+FE+
Sbjct: 106 IFTAEKKLTKGRYFPLTAVQRFDAAGKRIENGVYLGPFGALTFEGRFSWKNRILAFVFEQ 165

Query: 211 VRIKIGPLNPLEISLGQKEE-REPSTKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRV 269
           +RIKIGPL+PLE SLG+K+   EPS KDP FIWFY+DEEIAVARGRSGGTAFWCRCRR+
Sbjct: 166 IRIKIGPLDPLEFSLGKKDAVEEPSNKDPFFIWFYIDEEIAVARGRSGGTAFWCRCRRI 224

[Close]

BLAST of Csa1G024850 vs. NCBI nr
Match: gi|449439107|ref|XP_004137329.1| (PREDICTED: uncharacterized protein LOC101217184 [Cucumis sativus])

HSP 1 Score: 534.3 bits (1375), Expect = 1.3e-148
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 1


Query: 1   MSSLTVAASSFSSFSLTRFAHSSSNNSLIPPKVLKVPLNANSQSSISFKSSNTPSIYRFP 60
           MSSLTVAASSFSSFSLTRFAHSSSNNSLIPPKVLKVPLNANSQSSISFKSSNTPSIYRFP
Sbjct: 1   MSSLTVAASSFSSFSLTRFAHSSSNNSLIPPKVLKVPLNANSQSSISFKSSNTPSIYRFP 60

Query: 61  SLKTCAALDGKDPNGATPVLVEEESSTSSNIVNEEVEKSVKVLKNAAKTRKVPAEEVLSA 120
           SLKTCAALDGKDPNGATPVLVEEESSTSSNIVNEEVEKSVKVLKNAAKTRKVPAEEVLSA
Sbjct: 61  SLKTCAALDGKDPNGATPVLVEEESSTSSNIVNEEVEKSVKVLKNAAKTRKVPAEEVLSA 120

Query: 121 FSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIE 180
           FSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIE
Sbjct: 121 FSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRIE 180

Query: 181 NGVFLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCF 240
           NGVFLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCF
Sbjct: 181 NGVFLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCF 240

Query: 241 IWFYVDEEIAVARGRSGGTAFWCRCRRVNT 271
           IWFYVDEEIAVARGRSGGTAFWCRCRRVNT
Sbjct: 241 IWFYVDEEIAVARGRSGGTAFWCRCRRVNT 270

[Close]

BLAST of Csa1G024850 vs. NCBI nr
Match: gi|659106855|ref|XP_008453454.1| (PREDICTED: uncharacterized protein LOC103494159 [Cucumis melo])

HSP 1 Score: 502.3 bits (1292), Expect = 5.3e-139
Identity = 257/271 (94.83%), Postives = 260/271 (95.94%), Query Frame = 1


Query: 1   MSSLTVAASSFSSFSLTRFAHSSSNNSLIPPKV-LKVPLNANSQSSISFKSSNTPSIYRF 60
           MSSLTVAASSFSS SLTRFA SSSNNSL PPK+ LKVP NA S+S ISFKSSN PSIYRF
Sbjct: 1   MSSLTVAASSFSSLSLTRFASSSSNNSLNPPKLFLKVPFNAISESLISFKSSNRPSIYRF 60

Query: 61  PSLKTCAALDGKDPNGATPVLVEEESSTSSNIVNEEVEKSVKVLKNAAKTRKVPAEEVLS 120
           PSLKTCA LDGKDPNGATPVLV+EESSTSSNIVNEEVEKSVKVLKNAAKTRKVPAEEVLS
Sbjct: 61  PSLKTCATLDGKDPNGATPVLVQEESSTSSNIVNEEVEKSVKVLKNAAKTRKVPAEEVLS 120

Query: 121 AFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRI 180
           A SVLEKAKLDPS FFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRI
Sbjct: 121 ALSVLEKAKLDPSNFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRI 180

Query: 181 ENGVFLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPC 240
           ENGVFLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPC
Sbjct: 181 ENGVFLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPC 240

Query: 241 FIWFYVDEEIAVARGRSGGTAFWCRCRRVNT 271
           FIWFYVDEEIAVARGRSGGTAFWCRCRRVNT
Sbjct: 241 FIWFYVDEEIAVARGRSGGTAFWCRCRRVNT 271

[Close]

BLAST of Csa1G024850 vs. NCBI nr
Match: gi|802599723|ref|XP_012072560.1| (PREDICTED: uncharacterized protein LOC105634328 [Jatropha curcas])

HSP 1 Score: 341.7 bits (875), Expect = 1.2e-90
Identity = 176/272 (64.71%), Postives = 210/272 (77.21%), Query Frame = 1


Query: 1   MSSLTVAASSFSSFSLTRFAHSSSNNSLIPPKVLKVPLNANSQSSISFKSSNTPSIYRFP 60
           M S  V +SS+  FS   F   +S  + +P K+  +PL+AN++ +       +  + +F 
Sbjct: 1   MGSQAVISSSY--FSCLSFVALNSFQARLPIKLSVLPLHANAKPT-------SHHLLKFQ 60

Query: 61  SLKTCAALDGKDPNGATPVLVEEESSTSSNIV--NEEVEKSVKVLKNAAKTRKVPAEEVL 120
            LKT A LD K+ N   P+L++E+          N EVEKSVKVLKNAAKTRKV  +EVL
Sbjct: 61  RLKTRATLDEKEQNAPNPLLIQEQEEEEKMQARSNLEVEKSVKVLKNAAKTRKVAKDEVL 120

Query: 121 SAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKR 180
           SA SV+EKAK+DPS F +TLGG+ SPGRTWML+FTAEK+LK GRYFP+TA+QRFDAAGKR
Sbjct: 121 SAMSVIEKAKIDPSGFLDTLGGSESPGRTWMLVFTAEKQLKGGRYFPLTAVQRFDAAGKR 180

Query: 181 IENGVFLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDP 240
           IENGV+LGPIG LTFEGR +WK RILAFIFER+RIKIGPLNPLEISLGQKE+REP+TKDP
Sbjct: 181 IENGVYLGPIGCLTFEGRFTWKKRILAFIFERIRIKIGPLNPLEISLGQKEDREPNTKDP 240

Query: 241 CFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT 271
            FIWFY+DEEIAVARGRSGGTAFWCRC RV T
Sbjct: 241 FFIWFYIDEEIAVARGRSGGTAFWCRCHRVTT 263

[Close]

BLAST of Csa1G024850 vs. NCBI nr
Match: gi|224118714|ref|XP_002317888.1| (hypothetical protein POPTR_0012s04760g [Populus trichocarpa])

HSP 1 Score: 328.6 bits (841), Expect = 1.1e-86
Identity = 178/277 (64.26%), Postives = 206/277 (74.37%), Query Frame = 1


Query: 1   MSSLTVAASSFSS----FSLTRFAHSSSNNSLIPPKV--LKVPLNANSQSSISFKSSNTP 60
           M S   AA+S+ S     +L     SS N S +P K      PL+++ +   S       
Sbjct: 1   MGSQATAAASYLSCINWVALNSSQISSLNPSFLPLKAETCHFPLHSDIKQDASSLKYPNL 60

Query: 61  SIYRFPSLKTCAALDGKDPNGATPVLVEEESSTSSNIV-NEEVEKSVKVLKNAAKTRKVP 120
            + +  +++T A LD   P    P+ V+EE         +EEV++SVKVLKNAAKTRKV 
Sbjct: 61  HLLKLRNVRTRATLDESAP---APIRVQEEEDEGPQPQPSEEVKESVKVLKNAAKTRKVA 120

Query: 121 AEEVLSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFD 180
           AE VLSA +V+EKAKLDPS F NTLGG+ SPGRTWMLIFTAEKKL +GRYFP+TAIQRFD
Sbjct: 121 AEVVLSALTVIEKAKLDPSGFLNTLGGSKSPGRTWMLIFTAEKKLDRGRYFPLTAIQRFD 180

Query: 181 AAGKRIENGVFLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREP 240
           AAGKRIENGV+LGPIG LTFEGRLSWK RILAFIFER+RIKIGPLNP EISLGQKE+REP
Sbjct: 181 AAGKRIENGVYLGPIGFLTFEGRLSWKNRILAFIFERMRIKIGPLNPFEISLGQKEDREP 240

Query: 241 STKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT 271
           STKDP FIWFY+DEE+AVARGRSGGTAFWCRCRRV T
Sbjct: 241 STKDPFFIWFYIDEELAVARGRSGGTAFWCRCRRVAT 274

[Close]

BLAST of Csa1G024850 vs. NCBI nr
Match: gi|743890614|ref|XP_011039098.1| (PREDICTED: uncharacterized protein LOC105135767 isoform X1 [Populus euphratica])

HSP 1 Score: 326.6 bits (836), Expect = 4.0e-86
Identity = 178/277 (64.26%), Postives = 204/277 (73.65%), Query Frame = 1


Query: 1   MSSLTVAASSFSSFSLTRFAHSSSNNSLIPPKVLKV-------PLNANSQSSISFKSSNT 60
           M S   AAS  S  +    A +SS  S + P  L +       PL+++ +   S      
Sbjct: 1   MGSQAAAASYLSCINWV--ALNSSQISSLSPSFLPLRAETCHFPLHSDIKQDASSLKYPN 60

Query: 61  PSIYRFPSLKTCAALDGKDPNGATPVLVEEESSTSSNIVNEEVEKSVKVLKNAAKTRKVP 120
             + +  +++T A LD   P  A     EEE        +EEVE+SVKVLKNAAKTRKV 
Sbjct: 61  LHLLKLRNVRTRATLDESAP--APLRAQEEEDEGRQPQPSEEVEESVKVLKNAAKTRKVA 120

Query: 121 AEEVLSAFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFD 180
           AE VLSA +V+EKAKLDPS+F NTLGG+ SPGRTWMLIFTAEKKL +GRYFP+TAIQRFD
Sbjct: 121 AEVVLSALTVIEKAKLDPSRFLNTLGGSKSPGRTWMLIFTAEKKLDRGRYFPLTAIQRFD 180

Query: 181 AAGKRIENGVFLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREP 240
           AAGKRIENGV+LGPIG LTFEGRLSWK RILAFIFER+RIKIGPLNP EISLGQKE+REP
Sbjct: 181 AAGKRIENGVYLGPIGFLTFEGRLSWKNRILAFIFERMRIKIGPLNPFEISLGQKEDREP 240

Query: 241 STKDPCFIWFYVDEEIAVARGRSGGTAFWCRCRRVNT 271
           STKDP FIWFY+DEE+AVARGRSGGTAFWCRCRRV T
Sbjct: 241 STKDPFFIWFYIDEELAVARGRSGGTAFWCRCRRVAT 273

The following BLAST results are available for this feature:

BLAST of Csa1G024850 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPV7_CUCSA	8.8e-149	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G024850 PE=4 SV=1	[more]
A0A067KSD2_JATCU	8.4e-91	64.71	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05352 PE=4 SV=1	[more]
B9I2H3_POPTR	7.4e-87	64.26	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s04760g PE=4 SV=1	[more]
B9T2Q7_RICCO	1.8e-85	63.50	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0243940 PE=4 SV=1	[more]
A0A0B0PYU4_GOSAR	1.8e-85	65.90	Microbial collagenase OS=Gossypium arboreum GN=F383_16160 PE=4 SV=1	[more]

BLAST of Csa1G024850 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G18060.1	6.6e-79	77.09	unknown protein	[more]

BLAST of Csa1G024850 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449439107\|ref\|XP_004137329.1\|	1.3e-148	100.00	PREDICTED: uncharacterized protein LOC101217184 [Cucumis sativus]	[more]
gi\|659106855\|ref\|XP_008453454.1\|	5.3e-139	94.83	PREDICTED: uncharacterized protein LOC103494159 [Cucumis melo]	[more]
gi\|802599723\|ref\|XP_012072560.1\|	1.2e-90	64.71	PREDICTED: uncharacterized protein LOC105634328 [Jatropha curcas]	[more]
gi\|224118714\|ref\|XP_002317888.1\|	1.1e-86	64.26	hypothetical protein POPTR_0012s04760g [Populus trichocarpa]	[more]
gi\|743890614\|ref\|XP_011039098.1\|	4.0e-86	64.26	PREDICTED: uncharacterized protein LOC105135767 isoform X1 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010264	myo-inositol hexakisphosphate biosynthetic process
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0019637	organophosphate metabolic process
biological_process	GO:0006796	phosphate-containing compound metabolic process
biological_process	GO:0044763	single-organism cellular process
biological_process	GO:0044281	small molecule metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU108627	cucumber EST collection version 3.0	transcribed_cluster
CU113708	cucumber EST collection version 3.0	transcribed_cluster
CU129310	cucumber EST collection version 3.0	transcribed_cluster
CU170031	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G024850.1	Csa1G024850.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU108627	CU108627	transcribed_cluster
CU129310	CU129310	transcribed_cluster
CU170031	CU170031	transcribed_cluster
CU113708	CU113708	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35690	FAMILY NOT NAMED	coord: 19..270 score: 1.2
None	No IPR available	PANTHER	PTHR35690:SF1	SUBFAMILY NOT NAMED	coord: 19..270 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G024850	Cla018941	Watermelon (97103) v1	cuwmB092
Csa1G024850	MELO3C017340	Melon (DHL92) v3.5.1	cumeB055
Csa1G024850	ClCG06G014480	Watermelon (Charleston Gray)	cuwcgB080
Csa1G024850	CSPI01G04150	Wild cucumber (PI 183967)	cpicuB000
Csa1G024850	Cucsa.111350	Cucumber (Gy14) v1	cgycuB137
Csa1G024850	CmaCh11G003000	Cucurbita maxima (Rimu)	cmacuB087
Csa1G024850	Cp4.1LG04g13840	Cucurbita pepo (Zucchini)	cpecuB646
Csa1G024850	CsGy1G004040	Cucumber (Gy14) v2	cgybcuB001

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G024850	Melon (DHL92) v3.5.1	cumeB033
Csa1G024850	Watermelon (Charleston Gray)	cuwcgB058
Csa1G024850	Watermelon (Charleston Gray)	cuwcgB063
Csa1G024850	Watermelon (Charleston Gray)	cuwcgB082
Csa1G024850	Watermelon (97103) v1	cuwmB063
Csa1G024850	Watermelon (97103) v1	cuwmB095
Csa1G024850	Cucurbita pepo (Zucchini)	cpecuB024
Csa1G024850	Cucurbita pepo (Zucchini)	cpecuB031
Csa1G024850	Cucurbita pepo (Zucchini)	cpecuB363
Csa1G024850	Cucurbita pepo (Zucchini)	cpecuB381
Csa1G024850	Cucurbita pepo (Zucchini)	cpecuB509
Csa1G024850	Cucurbita pepo (Zucchini)	cpecuB654
Csa1G024850	Bottle gourd (USVL1VR-Ls)	culsiB025
Csa1G024850	Bottle gourd (USVL1VR-Ls)	culsiB054
Csa1G024850	Bottle gourd (USVL1VR-Ls)	culsiB071
Csa1G024850	Cucumber (Gy14) v2	cgybcuB196
Csa1G024850	Melon (DHL92) v3.6.1	cumedB028
Csa1G024850	Melon (DHL92) v3.6.1	cumedB047
Csa1G024850	Silver-seed gourd	carcuB0416
Csa1G024850	Silver-seed gourd	carcuB0622
Csa1G024850	Silver-seed gourd	carcuB0801
Csa1G024850	Watermelon (97103) v2	cuwmbB055
Csa1G024850	Watermelon (97103) v2	cuwmbB079
Csa1G024850	Wax gourd	cuwgoB040
Csa1G024850	Wax gourd	cuwgoB077
Csa1G024850	Cucumber (Chinese Long) v2	cucuB000
Csa1G024850	Cucumber (Chinese Long) v2	cucuB030
Csa1G024850	Cucumber (Gy14) v1	cgycuB160
Csa1G024850	Cucumber (Gy14) v1	cgycuB405
Csa1G024850	Cucurbita maxima (Rimu)	cmacuB050
Csa1G024850	Cucurbita maxima (Rimu)	cmacuB221
Csa1G024850	Cucurbita maxima (Rimu)	cmacuB393
Csa1G024850	Cucurbita maxima (Rimu)	cmacuB404
Csa1G024850	Cucurbita maxima (Rimu)	cmacuB686
Csa1G024850	Cucurbita moschata (Rifu)	cmocuB076
Csa1G024850	Cucurbita moschata (Rifu)	cmocuB039
Csa1G024850	Cucurbita moschata (Rifu)	cmocuB207