CU108627 (transcribed_cluster) Cucumber (Chinese Long) v2

Overview
NameCU108627
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPAP fibrillin domain protein,expressed protein
LocationChr1 : 2568562 .. 2568946 (+)
Sequence length390
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

TTTCTGGGACCTATTGGAAGCTTAACGTTCGAAGGTAGACTTTCATGGAAGACAAGAATACTAGCGTTCATTTTCGAACGAGTTCGAATAAAAATTGGACCTTTAAACCCTTTAGAGATTAGTCTTGGTCAAAAAGAAGAAAGGGAGCCAAGCACCGAGGATCCTTGCTTTATCTGGTTTTATGTTGATGAGGAAATAGCTGTTGCTCGTGGTAGAAGTGGGGGAACTGCATTTTGGTGCCGGTGTCGCCGTGTCAATACTTAGTTCTTTTCTCCATCAGATATTTGATCTTCTGCTTTGTACATGTCGAATTTTGTTATTGTCTTGTATCAAATTATCATGTACCTCGACGCTGTCATATTCAAATGTTCAATGTGCTATATTTATTGC
Homology
[Close]
BLAST of CU108627 vs. TrEMBL
Match: A0A0A0LPV7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G024850 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.8e-43
Identity = 86/87 (98.85%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1   FLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTEDPCFIWF 60
           FLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPST+DPCFIWF
Sbjct: 184 FLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWF 243

Query: 61  YVDEEIAVARGRSGGTAFWCRCRRVNT 120
           YVDEEIAVARGRSGGTAFWCRCRRVNT
Sbjct: 244 YVDEEIAVARGRSGGTAFWCRCRRVNT 270

Query: 121  180
           
Sbjct: 304  270

Query: 181  240
           
Sbjct: 364  270

Query: 241  262
           
Sbjct: 424  270

[Close]
BLAST of CU108627 vs. TrEMBL
Match: B9I2H3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s04760g PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 4.0e-38
Identity = 76/87 (87.36%), Postives = 82/87 (94.25%), Query Frame = 1 

Query: 1   FLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTEDPCFIWF 60
           +LGPIG LTFEGRLSWK RILAFIFER+RIKIGPLNP EISLGQKE+REPST+DP FIWF
Sbjct: 188 YLGPIGFLTFEGRLSWKNRILAFIFERMRIKIGPLNPFEISLGQKEDREPSTKDPFFIWF 247

Query: 61  YVDEEIAVARGRSGGTAFWCRCRRVNT 120
           Y+DEE+AVARGRSGGTAFWCRCRRV T
Sbjct: 248 YIDEELAVARGRSGGTAFWCRCRRVAT 274

Query: 121  180
           
Sbjct: 308  274

Query: 181  240
           
Sbjct: 368  274

Query: 241  262
           
Sbjct: 428  274

[Close]
BLAST of CU108627 vs. TrEMBL
Match: A0A067KSD2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05352 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.5e-37
Identity = 74/87 (85.06%), Postives = 81/87 (93.10%), Query Frame = 1 

Query: 1   FLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTEDPCFIWF 60
           +LGPIG LTFEGR +WK RILAFIFER+RIKIGPLNPLEISLGQKE+REP+T+DP FIWF
Sbjct: 177 YLGPIGCLTFEGRFTWKKRILAFIFERIRIKIGPLNPLEISLGQKEDREPNTKDPFFIWF 236

Query: 61  YVDEEIAVARGRSGGTAFWCRCRRVNT 120
           Y+DEEIAVARGRSGGTAFWCRC RV T
Sbjct: 237 YIDEEIAVARGRSGGTAFWCRCHRVTT 263

Query: 121  180
           
Sbjct: 297  263

Query: 181  240
           
Sbjct: 357  263

Query: 241  262
           
Sbjct: 417  263

[Close]
BLAST of CU108627 vs. TrEMBL
Match: A0A061G2E9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_012562 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 5.7e-37
Identity = 72/87 (82.76%), Postives = 80/87 (91.95%), Query Frame = 1 

Query: 1   FLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTEDPCFIWF 60
           FLGPIG LTFEG+ SWK RIL+FIFE++R+KIGP NPLEISLGQKE+REPST+DP FIWF
Sbjct: 172 FLGPIGFLTFEGKFSWKNRILSFIFEKIRVKIGPFNPLEISLGQKEDREPSTKDPFFIWF 231

Query: 61  YVDEEIAVARGRSGGTAFWCRCRRVNT 120
           Y+DEEIAVARGRSGGTAFWCRC RV T
Sbjct: 232 YIDEEIAVARGRSGGTAFWCRCHRVTT 258

Query: 121  180
           
Sbjct: 292  258

Query: 181  240
           
Sbjct: 352  258

Query: 241  262
           
Sbjct: 412  258

[Close]
BLAST of CU108627 vs. TrEMBL
Match: A0A0B2QP31_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_023505 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 7.5e-37
Identity = 72/86 (83.72%), Postives = 80/86 (93.02%), Query Frame = 1 

Query: 1   FLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTEDPCFIWF 60
           +LGPIG LTFEGRLSWK RILAF+FE +RIK+GPL PLEISLG+KE++EPST+DP FIWF
Sbjct: 170 YLGPIGQLTFEGRLSWKKRILAFVFENIRIKVGPLQPLEISLGKKEDKEPSTKDPFFIWF 229

Query: 61  YVDEEIAVARGRSGGTAFWCRCRRVN 120
           YVDEEIAVARGRSGGTAFWCRCRR N
Sbjct: 230 YVDEEIAVARGRSGGTAFWCRCRRAN 255

Query: 121  180
           
Sbjct: 290  255

Query: 181  240
           
Sbjct: 350  255

Query: 241  259
           
Sbjct: 410  255

[Close]
BLAST of CU108627 vs. NCBI nr
Match: gi|449439107|ref|XP_004137329.1| (PREDICTED: uncharacterized protein LOC101217184 [Cucumis sativus])

HSP 1 Score: 187.6 bits (475), Expect = 1.4e-44
Identity = 86/87 (98.85%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1   FLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTEDPCFIWF 60
           FLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPST+DPCFIWF
Sbjct: 184 FLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWF 243

Query: 61  YVDEEIAVARGRSGGTAFWCRCRRVNT 120
           YVDEEIAVARGRSGGTAFWCRCRRVNT
Sbjct: 244 YVDEEIAVARGRSGGTAFWCRCRRVNT 270

Query: 121  180
           
Sbjct: 304  270

Query: 181  240
           
Sbjct: 364  270

Query: 241  262
           
Sbjct: 424  270

[Close]
BLAST of CU108627 vs. NCBI nr
Match: gi|659106855|ref|XP_008453454.1| (PREDICTED: uncharacterized protein LOC103494159 [Cucumis melo])

HSP 1 Score: 187.6 bits (475), Expect = 1.4e-44
Identity = 86/87 (98.85%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1   FLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTEDPCFIWF 60
           FLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPST+DPCFIWF
Sbjct: 185 FLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPCFIWF 244

Query: 61  YVDEEIAVARGRSGGTAFWCRCRRVNT 120
           YVDEEIAVARGRSGGTAFWCRCRRVNT
Sbjct: 245 YVDEEIAVARGRSGGTAFWCRCRRVNT 271

Query: 121  180
           
Sbjct: 305  271

Query: 181  240
           
Sbjct: 365  271

Query: 241  262
           
Sbjct: 425  271

[Close]
BLAST of CU108627 vs. NCBI nr
Match: gi|224118714|ref|XP_002317888.1| (hypothetical protein POPTR_0012s04760g [Populus trichocarpa])

HSP 1 Score: 169.9 bits (429), Expect = 3.0e-39
Identity = 76/87 (87.36%), Postives = 82/87 (94.25%), Query Frame = 1 

Query: 1   FLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTEDPCFIWF 60
           +LGPIG LTFEGRLSWK RILAFIFER+RIKIGPLNP EISLGQKE+REPST+DP FIWF
Sbjct: 188 YLGPIGFLTFEGRLSWKNRILAFIFERMRIKIGPLNPFEISLGQKEDREPSTKDPFFIWF 247

Query: 61  YVDEEIAVARGRSGGTAFWCRCRRVNT 120
           Y+DEE+AVARGRSGGTAFWCRCRRV T
Sbjct: 248 YIDEELAVARGRSGGTAFWCRCRRVAT 274

Query: 121  180
           
Sbjct: 308  274

Query: 181  240
           
Sbjct: 368  274

Query: 241  262
           
Sbjct: 428  274

[Close]
BLAST of CU108627 vs. NCBI nr
Match: gi|743890614|ref|XP_011039098.1| (PREDICTED: uncharacterized protein LOC105135767 isoform X1 [Populus euphratica])

HSP 1 Score: 169.9 bits (429), Expect = 3.0e-39
Identity = 76/87 (87.36%), Postives = 82/87 (94.25%), Query Frame = 1 

Query: 1   FLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTEDPCFIWF 60
           +LGPIG LTFEGRLSWK RILAFIFER+RIKIGPLNP EISLGQKE+REPST+DP FIWF
Sbjct: 187 YLGPIGFLTFEGRLSWKNRILAFIFERMRIKIGPLNPFEISLGQKEDREPSTKDPFFIWF 246

Query: 61  YVDEEIAVARGRSGGTAFWCRCRRVNT 120
           Y+DEE+AVARGRSGGTAFWCRCRRV T
Sbjct: 247 YIDEELAVARGRSGGTAFWCRCRRVAT 273

Query: 121  180
           
Sbjct: 307  273

Query: 181  240
           
Sbjct: 367  273

Query: 241  262
           
Sbjct: 427  273

[Close]
BLAST of CU108627 vs. NCBI nr
Match: gi|743890618|ref|XP_011039099.1| (PREDICTED: uncharacterized protein LOC105135767 isoform X2 [Populus euphratica])

HSP 1 Score: 169.9 bits (429), Expect = 3.0e-39
Identity = 76/87 (87.36%), Postives = 82/87 (94.25%), Query Frame = 1 

Query: 1   FLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTEDPCFIWF 60
           +LGPIG LTFEGRLSWK RILAFIFER+RIKIGPLNP EISLGQKE+REPST+DP FIWF
Sbjct: 186 YLGPIGFLTFEGRLSWKNRILAFIFERMRIKIGPLNPFEISLGQKEDREPSTKDPFFIWF 245

Query: 61  YVDEEIAVARGRSGGTAFWCRCRRVNT 120
           Y+DEE+AVARGRSGGTAFWCRCRRV T
Sbjct: 246 YIDEELAVARGRSGGTAFWCRCRRVAT 272

Query: 121  180
           
Sbjct: 306  272

Query: 181  240
           
Sbjct: 366  272

Query: 241  262
           
Sbjct: 426  272

The following BLAST results are available for this feature:
BLAST of CU108627 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPV7_CUCSA1.8e-4398.85Uncharacterized protein OS=Cucumis sativus GN=Csa_1G024850 PE=4 SV=1[more]
B9I2H3_POPTR4.0e-3887.36Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s04760g PE=4 SV=1[more]
A0A067KSD2_JATCU1.5e-3785.06Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05352 PE=4 SV=1[more]
A0A061G2E9_THECC5.7e-3782.76Uncharacterized protein OS=Theobroma cacao GN=TCM_012562 PE=4 SV=1[more]
A0A0B2QP31_GLYSO7.5e-3783.72Uncharacterized protein OS=Glycine soja GN=glysoja_023505 PE=4 SV=1[more]
BLAST of CU108627 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449439107|ref|XP_004137329.1|1.4e-4498.85PREDICTED: uncharacterized protein LOC101217184 [Cucumis sativus][more]
gi|659106855|ref|XP_008453454.1|1.4e-4498.85PREDICTED: uncharacterized protein LOC103494159 [Cucumis melo][more]
gi|224118714|ref|XP_002317888.1|3.0e-3987.36hypothetical protein POPTR_0012s04760g [Populus trichocarpa][more]
gi|743890614|ref|XP_011039098.1|3.0e-3987.36PREDICTED: uncharacterized protein LOC105135767 isoform X1 [Populus euphratica][more]
gi|743890618|ref|XP_011039099.1|3.0e-3987.36PREDICTED: uncharacterized protein LOC105135767 isoform X2 [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G024850Csa1G024850gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0046706G0046706EST
H0034628H0034628EST


InterPro
Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35690FAMILY NOT NAMEDcoord: 1..87
score: 1.1