Cucsa.107730 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.107730
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Myb transcription factor
Location	scaffold00931 : 48390 .. 50114 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTGGTGGAAAATCAAGGAAGAGAAACAGAGATGGGATGTAGAGAAACAGAGAAAGAAAAaGTAAAGAAGAAAGGATTATGGTCACCTGAGGAAGATGAAAAGTTAAGAAGCTTCATCCTCAAGAATGGGCATGGCTGTTGGACTTCTGTCCCCATTAAAGCTGGTGAAGCATGCTTTCTTCCTTTGGCTCCCCCAATCAATCATTATAAACATTAAAATTTTGAACCCTTTTTGGTAATTACAAGTGCAGGATTATTAAGAAACTCAAAGAGCTGCAGATTGAGATGGTTCAATTACTTGAGGCCAGGGTTGAAAAGAGGAATGTTTAGCCAGCAAGAAGATGAGAAAATCTTGACCCTTCATCGCTTGTTAGGCAACAGGTAAATCTAATATCTTTAACTAGTTCGGGTACCATGTTAAAATTATTGATGGATTAGAATGATGATTTCAATTAGGTGGTCTCAAATAGCACAGCATTTAGCAGGAAGAACAGACAACGAGATAAAGAACTATTGGAATTCTCATCTGAAGAAGAAAGTGGTCTTGAATTTCCAAGATTTGAAAAGTGGAGTTTTTTCGAATCGAGATCCGCCGTTGGAGGAGATGGGAAGTTCAGGAAATGAGCGGATTGAAAGCCAACCGAGGGTCTTGTTTGCAGAATGGCTTTCTGTGTCTGATGTTAATGGCGGGAGCTCCATGGAAGGAAGTTTTGATGGTGAGGGAAGAAGAACAAGTAGAGAGGGCTATGGTTTTGAGATGCTCAATTGGGACCTTGATTTTGAGGGACACATTTCTGATGGCTTTGCAACTTGTGATCAATTGTGGTAAATTAATCCTTTGCTCTTTCCCAAAATTAAATTTGCAAGAAATATGTTTATTACATGATATCATATATTATTAATTTTGATGTACATCATTCATCGACTTAAAATTTTGTTTTAATTAAAATTCAACCGACTATGTATTCAAACTAACTCGAGCGCAAGAGTAAAATTCTGTTAGGTGATATAATATTAAGTTTATGTGTCCAAACCTCAGCCGACAAGTAACAGAAGATGTTTTACGATATAATATTAAATTTATTTCACTCATTTGTTTAAGTTTTTTATTCAACGAATGATTTTAAAGTTACATTTGAATTGAAAGAAGATTATCTTCTCTACAAACTGTACTTATCATTTTTCTAAGACTAATTTGGTAGAAACAAATTAAAATCTACCTGTATCTTTTGATAGTAGTATTATTTATGAAAGCAAAATGGTTATTAAGCTATGATTTTAGATTTGAAAAAGAAACCGAATGACAAGCCTTGAATTGGTCTTCTAAAAGGGCATATTTTTCTCCCACATATCAATTTGTTTGATTGGAATATCTTTTCTGGTTCGAATGTAGTCGAGAGCAAACGGGCTAAAAGGAGGAAGCAAGAAGCAAGGGCTCGAGAAGGAAGGTCGTTTTATGAGGGTATCCATCATGGACTTGGCAGCTAAGCCTTCGGTAGGGCAAGCCAAATCGTTCAAAGAGATTTCAGTAGCATTTGGTGGGATGGTTGGTTTGAAAGTTAAGAGCTTGGAGTATTCATTTAGAGTATGAAACATGTAATCATACACCTTGTCCATGTTTAGTTGCTCTTCCATGAACTTACTTGCTGCCTTCCCAATTGCTTGTGCCTAACAAGGACATTTAAGAAACATAAATTTTAGCCAATCAAGGTTTTCATAGTTTT

mRNA sequence

ACTTGGTGGAAAATCAAGGAAGAGAAACAGAGATGGGATGTAGAGAAACAGAGAAAGAAAAAGTAAAGAAGAAAGGATTATGGTCACCTGAGGAAGATGAAAAGTTAAGAAGCTTCATCCTCAAGAATGGGCATGGCTGTTGGACTTCTGTCCCCATTAAAGCTGGATTATTAAGAAACTCAAAGAGCTGCAGATTGAGATGGTTCAATTACTTGAGGCCAGGGTTGAAAAGAGGAATGTTTAGCCAGCAAGAAGATGAGAAAATCTTGACCCTTCATCGCTTGTTAGGCAACAGAATGATGATTTCAATTAGGTGGTCTCAAATAGCACAGCATTTAGCAGGAAGAACAGACAACGAGATAAAGAACTATTGGAATTCTCATCTGAAGAAGAAAGTGGTCTTGAATTTCCAAGATTTGAAAAGTGGAGTTTTTTCGAATCGAGATCCGCCGTTGGAGGAGATGGGAAGTTCAGGAAATGAGCGGATTGAAAGCCAACCGAGGGTCTTGTTTGCAGAATGGCTTTCTGTGTCTGATGTTAATGGCGGGAGCTCCATGGAAGGAAGTTTTGATGGTGAGGGAAGAAGAACAAGTAGAGAGGGCTATGGTTTTGAGATGCTCAATTGGGACCTTGATTTTGAGGGACACATTTCTGATGGCTTTGCAACTTGTGATCAATTGTGTCGAGAGCAAACGGGCTAAAAGGAGGAAGCAAGAAGCAAGGGCTCGAGAAGGAAGGTCGTTTTATGAGGGTATCCATCATGGACTTGGCAGCTAAGCCTTCGGTAGGGCAAGCCAAATCGTTCAAAGAGATTTCAGTAGCATTTGGTGGGATGGTTGGTTTGAAAGTTAAGAGCTTGGAGTATTCATTTAGAGTATGAAACATGTAATCATACACCTTGTCCATGTTTAGTTGCTCTTCCATGAACTTACTTGCTGCCTTCCCAATTGCTTGTGCCTAACAAGGACATTTAAGAAACATAAATTTTAGCCAATCAAGGTTTTCATAGTTTT

Coding sequence (CDS)

ATGGGATGTAGAGAAACAGAGAAAGAAAAaGTAAAGAAGAAAGGATTATGGTCACCTGAGGAAGATGAAAAGTTAAGAAGCTTCATCCTCAAGAATGGGCATGGCTGTTGGACTTCTGTCCCCATTAAAGCTGGATTATTAAGAAACTCAAAGAGCTGCAGATTGAGATGGTTCAATTACTTGAGGCCAGGGTTGAAAAGAGGAATGTTTAGCCAGCAAGAAGATGAGAAAATCTTGACCCTTCATCGCTTGTTAGGCAACAGAATGATGATTTCAATTAGGTGGTCTCAAATAGCACAGCATTTAGCAGGAAGAACAGACAACGAGATAAAGAACTATTGGAATTCTCATCTGAAGAAGAAAGTGGTCTTGAATTTCCAAGATTTGAAAAGTGGAGTTTTTTCGAATCGAGATCCGCCGTTGGAGGAGATGGGAAGTTCAGGAAATGAGCGGATTGAAAGCCAACCGAGGGTCTTGTTTGCAGAATGGCTTTCTGTGTCTGATGTTAATGGCGGGAGCTCCATGGAAGGAAGTTTTGATGGTGAGGGAAGAAGAACAAGTAGAGAGGGCTATGGTTTTGAGATGCTCAATTGGGACCTTGATTTTGAGGGACACATTTCTGATGGCTTTGCAACTTGTGATCAATTGTGTCGAGAGCAAACGGGCTAA

Protein sequence

MGCRETEKEKVKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQDLKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFDGEGRRTSREGYGFEMLNWDLDFEGHISDGFATCDQLCREQTG*

Homology

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BLAST of Cucsa.107730 vs. Swiss-Prot
Match: LAF1_ARATH (Transcription factor LAF1 OS=Arabidopsis thaliana GN=LAF1 PE=1 SV=2)

HSP 1 Score: 172.6 bits (436), Expect = 5.0e-42
Identity = 85/121 (70.25%), Postives = 94/121 (77.69%), Query Frame = 1


Query: 13  KKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQ 72
           +KGLWSPEEDEKLRSFIL  GH CWT+VPIKAGL RN KSCRLRW NYLRPGLKR M S 
Sbjct: 11  RKGLWSPEEDEKLRSFILSYGHSCWTTVPIKAGLQRNGKSCRLRWINYLRPGLKRDMISA 70

Query: 73  QEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV--LNFQDLK 132
           +E+E ILT H  LGN      +WSQIA+ L GRTDNEIKNYW+SHLKKK +   + QD K
Sbjct: 71  EEEETILTFHSSLGN------KWSQIAKFLPGRTDNEIKNYWHSHLKKKWLKSQSLQDAK 125

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BLAST of Cucsa.107730 vs. Swiss-Prot
Match: MYB3_HORVU (Myb-related protein Hv33 OS=Hordeum vulgare GN=MYB2 PE=2 SV=3)

HSP 1 Score: 155.2 bits (391), Expect = 8.3e-37
Identity = 73/110 (66.36%), Postives = 87/110 (79.09%), Query Frame = 1


Query: 13  KKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQ 72
           +KGLWSPEEDEKL + I+++G GCW+SVP  A L R  KSCRLRW NYLRP LKRG FSQ
Sbjct: 15  RKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRGCFSQ 74

Query: 73  QEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKV 123
           QE++ I+ LH++LGN      RWSQIA HL GRTDNEIKN+WNS +KKK+
Sbjct: 75  QEEDHIVALHQILGN------RWSQIASHLPGRTDNEIKNFWNSCIKKKL 118

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BLAST of Cucsa.107730 vs. Swiss-Prot
Match: MYB86_ARATH (Transcription factor MYB86 OS=Arabidopsis thaliana GN=MYB86 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 8.3e-37
Identity = 76/115 (66.09%), Postives = 88/115 (76.52%), Query Frame = 1


Query: 8   KEKVKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKR 67
           K+K++ KGLWSPEEDEKL ++I ++GHGCW+SVP  AGL R  KSCRLRW NYLRP LKR
Sbjct: 9   KQKLR-KGLWSPEEDEKLLNYITRHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKR 68

Query: 68  GMFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKV 123
           G FSQ E+  I+ LH  LGN      RWSQIA  L GRTDNEIKN+WNS LKKK+
Sbjct: 69  GAFSQDEESLIIELHAALGN------RWSQIATRLPGRTDNEIKNFWNSCLKKKL 116

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BLAST of Cucsa.107730 vs. Swiss-Prot
Match: MYB46_ARATH (Transcription factor MYB46 OS=Arabidopsis thaliana GN=MYB46 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 9.1e-36
Identity = 77/163 (47.24%), Postives = 99/163 (60.74%), Query Frame = 1


Query: 6   TEKEKVKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGL 65
           T + K  KKGLWSPEED KL  ++L NG GCW+ V   AGL R  KSCRLRW NYLRP L
Sbjct: 12  THQVKKMKKGLWSPEEDSKLMQYMLSNGQGCWSDVAKNAGLQRCGKSCRLRWINYLRPDL 71

Query: 66  KRGMFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLN 125
           KRG FS QE++ I+  H +LGN      RWSQIA  L GRTDNEIKN+WNS +KK+ +  
Sbjct: 72  KRGAFSPQEEDLIIRFHSILGN------RWSQIAARLPGRTDNEIKNFWNSTIKKR-LKK 131

Query: 126 FQDLKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSD 169
             D  + + ++   P     SS N       + +   ++S+ +
Sbjct: 132 MSDTSNLINNSSSSPNTASDSSSNSASSLDIKDIIGSFMSLQE 167

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BLAST of Cucsa.107730 vs. Swiss-Prot
Match: MYB26_ARATH (Transcription factor MYB26 OS=Arabidopsis thaliana GN=MYB26 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.7e-34
Identity = 75/125 (60.00%), Postives = 89/125 (71.20%), Query Frame = 1


Query: 8   KEKVKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAG---------LLRNSKSCRLRWF 67
           K+KVK+ GLWSPEEDEKL ++I   GHGCW+SVP  AG         L R  KSCRLRW 
Sbjct: 9   KQKVKR-GLWSPEEDEKLINYINSYGHGCWSSVPKHAGTYTHIHGFCLQRCGKSCRLRWI 68

Query: 68  NYLRPGLKRGMFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHL 124
           NYLRP LKRG FS QE   I+ LH +LGN      RW+QIA+HL GRTDNE+KN+WNS +
Sbjct: 69  NYLRPDLKRGSFSPQEAALIIELHSILGN------RWAQIAKHLPGRTDNEVKNFWNSSI 126

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BLAST of Cucsa.107730 vs. TrEMBL
Match: A0A0A0L6I1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182040 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 3.2e-104
Identity = 191/211 (90.52%), Postives = 194/211 (91.94%), Query Frame = 1


Query: 8   KEKVKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKR 67
           K  V+ +G  +    EKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKR
Sbjct: 23  KNLVENQGRETEMGYEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKR 82

Query: 68  GMFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQ 127
           GMFSQQEDEKILTLHRLLGNR      WSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQ
Sbjct: 83  GMFSQQEDEKILTLHRLLGNR------WSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQ 142

Query: 128 DLKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFDGEG-RRT 187
           D KSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFDGEG RRT
Sbjct: 143 DFKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFDGEGRRRT 202

Query: 188 SREGYGFEMLNWDLDFEGHISDGFATCDQLC 218
           SREGYGFEMLNWDLDFEGHISDGFATCDQLC
Sbjct: 203 SREGYGFEMLNWDLDFEGHISDGFATCDQLC 227

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BLAST of Cucsa.107730 vs. TrEMBL
Match: V7BFX6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G069200g PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.4e-51
Identity = 108/194 (55.67%), Postives = 136/194 (70.10%), Query Frame = 1


Query: 1   MGCRETEKEKVK-KKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFN 60
           MGC+  EK K K KKGLWSPEED KLR++ILK+GHGCW+SVPIKAGL RN KSCRLRW N
Sbjct: 1   MGCQPLEKGKPKHKKGLWSPEEDNKLRNYILKHGHGCWSSVPIKAGLQRNGKSCRLRWIN 60

Query: 61  YLRPGLKRGMFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLK 120
           YLRPGLKRG FS+QE+E ILTLH +LGN      +WSQI+QHL GRTDNEIKNYW+S+LK
Sbjct: 61  YLRPGLKRGKFSKQEEETILTLHHMLGN------KWSQISQHLPGRTDNEIKNYWHSYLK 120

Query: 121 KKVV----LNFQDLKSGVFSNRDP-----PLEEMGSSGNERI--------ESQPRVLFAE 177
           KKV     ++F +      S+ D       L+++ + G +           S P++LFAE
Sbjct: 121 KKVAKAKEMDFHNQMKYASSSSDTMDSSNSLQKLATQGTQNFNFTNEACQSSLPKLLFAE 180

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BLAST of Cucsa.107730 vs. TrEMBL
Match: A0A151U6H0_CAJCA (Transcription factor LAF1 OS=Cajanus cajan GN=KK1_007577 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 4.5e-50
Identity = 110/203 (54.19%), Postives = 138/203 (67.98%), Query Frame = 1


Query: 1   MGCRETEKEKVK-KKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFN 60
           MGC+  EK K K KKGLWSPEED KLR++ILK+GHGCW+SVPIKAGL RN KSCRLRW N
Sbjct: 1   MGCQPLEKAKPKHKKGLWSPEEDNKLRNYILKHGHGCWSSVPIKAGLQRNGKSCRLRWIN 60

Query: 61  YLRPGLKRGMFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLK 120
           YLRPGLKRG FS+QE+E IL LH +LGN      +WSQI+QHL GRTDNEIKNYW+S+LK
Sbjct: 61  YLRPGLKRGKFSKQEEETILALHHMLGN------KWSQISQHLPGRTDNEIKNYWHSYLK 120

Query: 121 KKVVLNFQ-----DLKSGVFS----NRDPPLEEMGSSGNERI--------ESQPRVLFAE 180
           K++  + +      +K G  S    +     +++ + G +           S P++LFAE
Sbjct: 121 KRMAKSKEMEYENQMKYGSSSSDTMDSSHSFQKLATQGPQNYGFNKEACQSSLPKLLFAE 180

Query: 181 WLSVSDVNGGSSMEGSFDGEGRR 186
           WLS+  VNGG++   S D  G R
Sbjct: 181 WLSLDHVNGGNT--NSVDSLGLR 195

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BLAST of Cucsa.107730 vs. TrEMBL
Match: A0A072W078_MEDTR (Myb transcription factor OS=Medicago truncatula GN=MTR_1g100667 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.7e-49
Identity = 120/259 (46.33%), Postives = 147/259 (56.76%), Query Frame = 1


Query: 1   MGCRETEKEKVK-KKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFN 60
           MG +  EK K K +KGLWSPEED KLR++ILK+GHGCW+SVPIKAGL RN KSCRLRW N
Sbjct: 1   MGFQPLEKTKPKHRKGLWSPEEDHKLRNYILKHGHGCWSSVPIKAGLQRNGKSCRLRWIN 60

Query: 61  YLRPGLKRGMFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLK 120
           YLRPGLKRG FS+QE+E ILTLH +LGN      +WSQIAQHL GRTDNEIKNYW+S+LK
Sbjct: 61  YLRPGLKRGKFSKQEEETILTLHHMLGN------KWSQIAQHLPGRTDNEIKNYWHSYLK 120

Query: 121 KKVV--------LNFQDLKSGVFS-NRDPPLEEMGSSGNERIES---------QPRVLFA 180
           K+V           FQ   S   + N  P L+++ +      +S          P++LFA
Sbjct: 121 KRVAKAMEMESHKQFQYASSSSDTMNSSPSLQKLATQDPHNYKSITKETHQSTLPKLLFA 180

Query: 181 EWLSVSDVNGG--------------------------SSMEGSFDGEGRRTSREGYGFEM 214
           EWLS+  VN                            +  EG F+GE   +       EM
Sbjct: 181 EWLSLDHVNNNNRNSSNSVESLVMRNGFDQNSAFQEVTMQEGPFNGEFHNSVTNISATEM 240

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BLAST of Cucsa.107730 vs. TrEMBL
Match: A0A0S3SN54_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G077700 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.1e-48
Identity = 104/195 (53.33%), Postives = 131/195 (67.18%), Query Frame = 1


Query: 1   MGCRETEKEKVK-KKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFN 60
           MGC+  EK K K KKGLWSPEED KLR++ILK GHGCW+SVPIKAGL R+ KSCRLRW N
Sbjct: 1   MGCQPLEKGKPKHKKGLWSPEEDNKLRNYILKQGHGCWSSVPIKAGLQRSGKSCRLRWIN 60

Query: 61  YLRPGLKRGMFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLK 120
           YLRPGLKRG F++QE+E ILTLH +LGN+      WSQI+QHL GRTDNEIKNYW+S+LK
Sbjct: 61  YLRPGLKRGKFTKQEEETILTLHHMLGNK------WSQISQHLPGRTDNEIKNYWHSYLK 120

Query: 121 KKVV----------LNFQDLKSGVFSNRDPPLEEMGSSGNERIE--------SQPRVLFA 177
           KK            + +    S    + +  L+ + + G +           S P++LFA
Sbjct: 121 KKEAKAKEMDSHNQIKYASSSSDTMESSNS-LKNLATQGTQSCNFTKEASQSSLPKLLFA 180

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BLAST of Cucsa.107730 vs. TAIR10
Match: AT5G52260.1 (AT5G52260.1 myb domain protein 19)

HSP 1 Score: 174.5 bits (441), Expect = 7.4e-44
Identity = 84/144 (58.33%), Postives = 107/144 (74.31%), Query Frame = 1


Query: 12  KKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFS 71
           ++KGLWSPEED+KL+SFIL  GH CWT+VPI AGL RN KSCRLRW NYLRPGLKRG FS
Sbjct: 12  QRKGLWSPEEDQKLKSFILSRGHACWTTVPILAGLQRNGKSCRLRWINYLRPGLKRGSFS 71

Query: 72  QQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQDLKS 131
           ++E+E ILTLH  LGN      +WS+IA++L GRTDNEIKNYW+S+LKK+ + +   LKS
Sbjct: 72  EEEEETILTLHSSLGN------KWSRIAKYLPGRTDNEIKNYWHSYLKKRWLKSQPQLKS 131

Query: 132 GVFSNRDPPLEEMGSSGNERIESQ 156
            +    + P   + S G   +E++
Sbjct: 132 QISDLTESP-SSLLSCGKRNLETE 148

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BLAST of Cucsa.107730 vs. TAIR10
Match: AT3G48920.1 (AT3G48920.1 myb domain protein 45)

HSP 1 Score: 172.9 bits (437), Expect = 2.2e-43
Identity = 89/193 (46.11%), Postives = 126/193 (65.28%), Query Frame = 1


Query: 4   RETEKEKVKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRP 63
           RE + ++ ++KGLWSPEEDEKLRS +LK GHGCW+++P++AGL RN KSCRLRW NYLRP
Sbjct: 10  REMKSKEKQRKGLWSPEEDEKLRSHVLKYGHGCWSTIPLQAGLQRNGKSCRLRWVNYLRP 69

Query: 64  GLKRGMFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV 123
           GLK+ +F++QE+  +L+LH +LGN      +WSQI++ L GRTDNEIKNYW+S+LKK V 
Sbjct: 70  GLKKSLFTKQEETILLSLHSMLGN------KWSQISKFLPGRTDNEIKNYWHSNLKKGVT 129

Query: 124 L----------------NFQDLKSGVFSNRDPPLEEMGSSGNERIES-QPRVLFAEWLSV 180
           L                + + L+S   + R      +G + N +  S  P ++F+EWL  
Sbjct: 130 LKQHETTKKHQTPLITNSLEALQSS--TERSSSSINVGETSNAQTSSFSPNLVFSEWLDH 189

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BLAST of Cucsa.107730 vs. TAIR10
Match: AT4G25560.1 (AT4G25560.1 myb domain protein 18)

HSP 1 Score: 172.6 bits (436), Expect = 2.8e-43
Identity = 85/121 (70.25%), Postives = 94/121 (77.69%), Query Frame = 1


Query: 13  KKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKRGMFSQ 72
           +KGLWSPEEDEKLRSFIL  GH CWT+VPIKAGL RN KSCRLRW NYLRPGLKR M S 
Sbjct: 11  RKGLWSPEEDEKLRSFILSYGHSCWTTVPIKAGLQRNGKSCRLRWINYLRPGLKRDMISA 70

Query: 73  QEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV--LNFQDLK 132
           +E+E ILT H  LGN      +WSQIA+ L GRTDNEIKNYW+SHLKKK +   + QD K
Sbjct: 71  EEEETILTFHSSLGN------KWSQIAKFLPGRTDNEIKNYWHSHLKKKWLKSQSLQDAK 125

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BLAST of Cucsa.107730 vs. TAIR10
Match: AT1G57560.1 (AT1G57560.1 myb domain protein 50)

HSP 1 Score: 158.3 bits (399), Expect = 5.5e-39
Identity = 82/142 (57.75%), Postives = 97/142 (68.31%), Query Frame = 1


Query: 8   KEKVKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKR 67
           K+K++ KGLWSPEEDEKL ++I K+GHGCW+SVP  AGL R  KSCRLRW NYLRP LKR
Sbjct: 9   KQKLR-KGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLERCGKSCRLRWINYLRPDLKR 68

Query: 68  GMFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQ 127
           G FS +E   I+ LH +LGN      RWSQIA  L GRTDNEIKN WNS +KKK+     
Sbjct: 69  GAFSSEEQNLIVELHAVLGN------RWSQIAARLPGRTDNEIKNLWNSCIKKKL----- 128

Query: 128 DLKSGVFSNRDPPLEEMGSSGN 150
            +K G+      PL E+G   N
Sbjct: 129 -MKKGIDPITHKPLSEVGKETN 137

[Close]

BLAST of Cucsa.107730 vs. TAIR10
Match: AT5G26660.1 (AT5G26660.1 myb domain protein 86)

HSP 1 Score: 155.2 bits (391), Expect = 4.7e-38
Identity = 76/115 (66.09%), Postives = 88/115 (76.52%), Query Frame = 1


Query: 8   KEKVKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKR 67
           K+K++ KGLWSPEEDEKL ++I ++GHGCW+SVP  AGL R  KSCRLRW NYLRP LKR
Sbjct: 9   KQKLR-KGLWSPEEDEKLLNYITRHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKR 68

Query: 68  GMFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKV 123
           G FSQ E+  I+ LH  LGN      RWSQIA  L GRTDNEIKN+WNS LKKK+
Sbjct: 69  GAFSQDEESLIIELHAALGN------RWSQIATRLPGRTDNEIKNFWNSCLKKKL 116

[Close]

BLAST of Cucsa.107730 vs. NCBI nr
Match: gi|778688544|ref|XP_011652772.1| (PREDICTED: LOW QUALITY PROTEIN: transcription factor LAF1-like [Cucumis sativus])

HSP 1 Score: 437.2 bits (1123), Expect = 1.7e-119
Identity = 214/223 (95.96%), Postives = 214/223 (95.96%), Query Frame = 1


Query: 1   MGCRETEKEKVKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNY 60
           MGCRETEKEKVKKKGL SPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNY
Sbjct: 1   MGCRETEKEKVKKKGLXSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNY 60

Query: 61  LRPGLKRGMFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKK 120
           LRPGLKRGMFSQQEDEKILTLHRLLGNR      WSQIAQHLAGRTDNEIKNYWNSHLKK
Sbjct: 61  LRPGLKRGMFSQQEDEKILTLHRLLGNR------WSQIAQHLAGRTDNEIKNYWNSHLKK 120

Query: 121 KVVLNFQDLKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFD 180
           KVVLNFQD KSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFD
Sbjct: 121 KVVLNFQDFKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFD 180

Query: 181 GEG-RRTSREGYGFEMLNWDLDFEGHISDGFATCDQLCREQTG 223
           GEG RRTSREGYGFEMLNWDLDFEGHISDGFATCDQLCREQTG
Sbjct: 181 GEGRRRTSREGYGFEMLNWDLDFEGHISDGFATCDQLCREQTG 217

[Close]

BLAST of Cucsa.107730 vs. NCBI nr
Match: gi|659077466|ref|XP_008439220.1| (PREDICTED: transcription factor LAF1-like isoform X4 [Cucumis melo])

HSP 1 Score: 411.4 bits (1056), Expect = 1.0e-111
Identity = 200/222 (90.09%), Postives = 207/222 (93.24%), Query Frame = 1


Query: 1   MGCRETEKEKVKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNY 60
           MGCRETEKEKVKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNY
Sbjct: 36  MGCRETEKEKVKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNY 95

Query: 61  LRPGLKRGMFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKK 120
           LRPGLKRGMFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKK
Sbjct: 96  LRPGLKRGMFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKK 155

Query: 121 KVVLNFQDLKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFD 180
           KVV           SNRDPPLE MGSSG++R E++PRVLFAEWLSVSD+N GSSMEGSFD
Sbjct: 156 KVV-----------SNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSFD 215

Query: 181 GEGRR-TSREGYGFEMLNWDLDFEGHISDGFATCDQLCREQT 222
           GEGRR TSREGYGFEMLNWDLDFEGHISDGFATCD+LCREQ+
Sbjct: 216 GEGRRTTSREGYGFEMLNWDLDFEGHISDGFATCDELCREQS 246

[Close]

BLAST of Cucsa.107730 vs. NCBI nr
Match: gi|659077460|ref|XP_008439216.1| (PREDICTED: transcription factor LAF1-like isoform X1 [Cucumis melo])

HSP 1 Score: 401.7 bits (1031), Expect = 8.1e-109
Identity = 196/217 (90.32%), Postives = 202/217 (93.09%), Query Frame = 1


Query: 1   MGCRETEKEKVKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNY 60
           MGCRETEKEKVKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNY
Sbjct: 36  MGCRETEKEKVKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNY 95

Query: 61  LRPGLKRGMFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKK 120
           LRPGLKRGMFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKK
Sbjct: 96  LRPGLKRGMFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKK 155

Query: 121 KVVLNFQDLKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFD 180
           KVV           SNRDPPLE MGSSG++R E++PRVLFAEWLSVSD+N GSSMEGSFD
Sbjct: 156 KVV-----------SNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSFD 215

Query: 181 GEGRR-TSREGYGFEMLNWDLDFEGHISDGFATCDQL 217
           GEGRR TSREGYGFEMLNWDLDFEGHISDGFATCD+L
Sbjct: 216 GEGRRTTSREGYGFEMLNWDLDFEGHISDGFATCDEL 241

[Close]

BLAST of Cucsa.107730 vs. NCBI nr
Match: gi|659077464|ref|XP_008439219.1| (PREDICTED: transcription factor LAF1-like isoform X3 [Cucumis melo])

HSP 1 Score: 401.7 bits (1031), Expect = 8.1e-109
Identity = 196/217 (90.32%), Postives = 202/217 (93.09%), Query Frame = 1


Query: 1   MGCRETEKEKVKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNY 60
           MGCRETEKEKVKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNY
Sbjct: 36  MGCRETEKEKVKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNY 95

Query: 61  LRPGLKRGMFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKK 120
           LRPGLKRGMFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKK
Sbjct: 96  LRPGLKRGMFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKK 155

Query: 121 KVVLNFQDLKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFD 180
           KVV           SNRDPPLE MGSSG++R E++PRVLFAEWLSVSD+N GSSMEGSFD
Sbjct: 156 KVV-----------SNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSFD 215

Query: 181 GEGRR-TSREGYGFEMLNWDLDFEGHISDGFATCDQL 217
           GEGRR TSREGYGFEMLNWDLDFEGHISDGFATCD+L
Sbjct: 216 GEGRRTTSREGYGFEMLNWDLDFEGHISDGFATCDEL 241

[Close]

BLAST of Cucsa.107730 vs. NCBI nr
Match: gi|700202235|gb|KGN57368.1| (hypothetical protein Csa_3G182040 [Cucumis sativus])

HSP 1 Score: 386.0 bits (990), Expect = 4.6e-104
Identity = 191/211 (90.52%), Postives = 194/211 (91.94%), Query Frame = 1


Query: 8   KEKVKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKR 67
           K  V+ +G  +    EKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKR
Sbjct: 23  KNLVENQGRETEMGYEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYLRPGLKR 82

Query: 68  GMFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQ 127
           GMFSQQEDEKILTLHRLLGNR      WSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQ
Sbjct: 83  GMFSQQEDEKILTLHRLLGNR------WSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQ 142

Query: 128 DLKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFDGEG-RRT 187
           D KSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFDGEG RRT
Sbjct: 143 DFKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFDGEGRRRT 202

Query: 188 SREGYGFEMLNWDLDFEGHISDGFATCDQLC 218
           SREGYGFEMLNWDLDFEGHISDGFATCDQLC
Sbjct: 203 SREGYGFEMLNWDLDFEGHISDGFATCDQLC 227

The following BLAST results are available for this feature:

BLAST of Cucsa.107730 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LAF1_ARATH	5.0e-42	70.25	Transcription factor LAF1 OS=Arabidopsis thaliana GN=LAF1 PE=1 SV=2	[more]
MYB3_HORVU	8.3e-37	66.36	Myb-related protein Hv33 OS=Hordeum vulgare GN=MYB2 PE=2 SV=3	[more]
MYB86_ARATH	8.3e-37	66.09	Transcription factor MYB86 OS=Arabidopsis thaliana GN=MYB86 PE=2 SV=1	[more]
MYB46_ARATH	9.1e-36	47.24	Transcription factor MYB46 OS=Arabidopsis thaliana GN=MYB46 PE=2 SV=1	[more]
MYB26_ARATH	1.7e-34	60.00	Transcription factor MYB26 OS=Arabidopsis thaliana GN=MYB26 PE=2 SV=1	[more]

BLAST of Cucsa.107730 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6I1_CUCSA	3.2e-104	90.52	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182040 PE=4 SV=1	[more]
V7BFX6_PHAVU	2.4e-51	55.67	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G069200g PE=4 SV=1	[more]
A0A151U6H0_CAJCA	4.5e-50	54.19	Transcription factor LAF1 OS=Cajanus cajan GN=KK1_007577 PE=4 SV=1	[more]
A0A072W078_MEDTR	1.7e-49	46.33	Myb transcription factor OS=Medicago truncatula GN=MTR_1g100667 PE=4 SV=1	[more]
A0A0S3SN54_PHAAN	1.1e-48	53.33	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G077700 PE=...	[more]

BLAST of Cucsa.107730 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G52260.1	7.4e-44	58.33	myb domain protein 19	[more]
AT3G48920.1	2.2e-43	46.11	myb domain protein 45	[more]
AT4G25560.1	2.8e-43	70.25	myb domain protein 18	[more]
AT1G57560.1	5.5e-39	57.75	myb domain protein 50	[more]
AT5G26660.1	4.7e-38	66.09	myb domain protein 86	[more]

BLAST of Cucsa.107730 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778688544\|ref\|XP_011652772.1\|	1.7e-119	95.96	PREDICTED: LOW QUALITY PROTEIN: transcription factor LAF1-like [Cucumis sativus]	[more]
gi\|659077466\|ref\|XP_008439220.1\|	1.0e-111	90.09	PREDICTED: transcription factor LAF1-like isoform X4 [Cucumis melo]	[more]
gi\|659077460\|ref\|XP_008439216.1\|	8.1e-109	90.32	PREDICTED: transcription factor LAF1-like isoform X1 [Cucumis melo]	[more]
gi\|659077464\|ref\|XP_008439219.1\|	8.1e-109	90.32	PREDICTED: transcription factor LAF1-like isoform X3 [Cucumis melo]	[more]
gi\|700202235\|gb\|KGN57368.1\|	4.6e-104	90.52	hypothetical protein Csa_3G182040 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom
IPR001005	SANT/Myb
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.107730.1	Cucsa.107730.1	mRNA
Cucsa.107740.2	Cucsa.107740.2	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 14..61 score: 7.2E-13coord: 67..112 score: 6.1
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 66..114 score: 1.6E-15coord: 13..63 score: 7.9
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 69..116 score: 1.2E-26coord: 15..68 score: 1.7
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 12..108 score: 2.53
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 9..61 score: 14.866coord: 62..116 score: 25
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 1..150 score: 3.3
None	No IPR available	PANTHER	PTHR10641:SF563	MYB TRANSCRIPTION FACTOR-RELATED	coord: 1..150 score: 3.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.107730	Cla006186	Watermelon (97103) v1	cgywmB152
Cucsa.107730	Csa3G182040	Cucumber (Chinese Long) v2	cgycuB132
Cucsa.107730	ClCG05G007990	Watermelon (Charleston Gray)	cgywcgB152
Cucsa.107730	CSPI03G16870	Wild cucumber (PI 183967)	cgycpiB133
Cucsa.107730	CmaCh02G010610	Cucurbita maxima (Rimu)	cgycmaB0251
Cucsa.107730	CmoCh02G010780	Cucurbita moschata (Rifu)	cgycmoB0250
Cucsa.107730	MELO3C031809.2	Melon (DHL92) v3.6.1	cgymedB142
Cucsa.107730	CsaV3_3G017040	Cucumber (Chinese Long) v3	cgycucB137
Cucsa.107730	Cla97C05G090020	Watermelon (97103) v2	cgywmbB147
Cucsa.107730	Bhi01G000967	Wax gourd	cgywgoB170
Cucsa.107730	Carg08417	Silver-seed gourd	carcgyB0794

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.107730	Cucurbita maxima (Rimu)	cgycmaB0248
Cucsa.107730	Cucurbita maxima (Rimu)	cgycmaB0249
Cucsa.107730	Cucurbita moschata (Rifu)	cgycmoB0247
Cucsa.107730	Cucurbita moschata (Rifu)	cgycmoB0248
Cucsa.107730	Melon (DHL92) v3.5.1	cgymeB142
Cucsa.107730	Cucurbita pepo (Zucchini)	cgycpeB0240
Cucsa.107730	Cucurbita pepo (Zucchini)	cgycpeB0241
Cucsa.107730	Bottle gourd (USVL1VR-Ls)	cgylsiB143
Cucsa.107730	Silver-seed gourd	carcgyB0828
Cucsa.107730	Silver-seed gourd	carcgyB1105