Cucsa.106820 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCTCCTTCATCCACCCTGGTTTCTTCCTTCTCCCTCACAGCCGGTGACAACCAACTACCGCCGCACCAACCCCACTCCCTTCTCGGTCGTCGGAGAACCCCTCTATCAATTTTCTTTCTCCTCAACCTGCCATTTGTCTATTTCCCTACTTTTCTCGTTTTCGCCCGTCTCCGATTCTCACTCTTTCTTCTTCGTGCCGTCCGCCTCGTCAAGGAATCACGTTTTGAATTCATAAGCACTTTCAACTGAATTTCTATTATTAACATGGCGAGGAAGAAGAGTAATACGAATAGAGGATCATCCAACCCCGGATTCGGTCCTCAAAATTCCATCACTCTAAGACAGGAAGCTACTGGGAAAATCAAACCCAAAGTATCTAACAATGCCAAAGTTTATTTGAATCATTTGGAAAATTTAGCGACTTGGGCTAGTGGGCAACCGTCTTTACCTTCATTGGCTGCTTTCTTTGGGCAACGTCTTGCTGCTGCAGCCGAGTCTTTGGCGGTTTCTCCTGACCCTTCTCTATTTCTCTGCGCGAGGTTCGTATGTATTCTGCTCTTTACATTTATTTAGCTTTGCATGCCTAGATTTGTTGTTTTTGTAGCGTTTATAACAGGGCAAGTTCATAAATATTGGTTGTATTTGAGGATGGGAGGTTTTTGTTGAGCTTTTTTGATTAGGTCTAAGTGAATGATTTATAGCAGTATTGAAATATTTAGGGGGGCACTGTTATACACCGTAATCTAATTAGTTCTAAGTTATTGCAATGGTGGAATTCAACAGTTGAACAATCGGTTGAAGAATTGAAAGTGTTCAATGCTATTTTGAGACTACTGAACAACACATCAATTGGTGCTGGAGATGAAAGAAGCTGGAATTTGTGTTGCTCTGGTAATCTCAGTCAGATCTTTGGCTCTGCCTGATTGATTTCAGGAGAGCTATTGAAGGAGAGATTTCAAAGATAGTGACTAGAGGAACATGCCTCTGAAGATAAAAACTTAGAGTGATTAGCATGTTTAAATGGTTATTTGTTTGTTTGTTTGTTGAGAACGTTATAATAAACATCTCCTATGGTGGCCTTGAATCTCTATGGGTGTTTTTTTTTGCTTGGAAGAGTATGAAGGAATTGACCACCATGTCTAGCATGTCTCATTTGGCGATCGATTTTGGAACTCATTAGTCATGATTATAAAGTTTTGGATACTTTGGCATTTTTAGTTCCGTTGAAGGCTTGCTATCCCTTCTGCTATGTGGTAATCTCTTGAGGAAAAAGCCAGTAAGCTATGGAGTATGGCCAATTCAATGAAATTTTTTATTTGGAGCGTGTGAGTTGGGAAGAAAAAGAAAGCCTTTAACAGCCAGGCTAAAAACTTGTGGGTGAAGTGCATGAGTTAGCCAAGCCTCATTGTTCTTTATTTCTCTAAATCGTGTGTTTAACCACTATATTTCCCTCGTTGTAATACTAATTAGGGTGCCTTTTGTTTTGTTATGTTTTTTTTTATGACAGTTTTCTTCTTTCTCCTTTGACTTCCAGGGAACTCATAATCAAATAATGTTTACATTTGCCTAAAAAAATGTTTACATCGGTCACATTACTTTTTTTTAAAAAATAGAAACATCACATTACTCATAGGACAAGGCTGAGCATTACAGTATAGGTTAAAGATCCGTTATTCTATTTTCTTGTTGTTAAATTTTTACAATTACTTTGAAAAGAAAATCCGCTGGTGTTTTTTATTCAATACATGGTTGGAGTGGACACCTGATTCGAACCATATAGCTGTTCCATGTTAAGGACTTTTATCATGTCACATTTGAATGTTGTCTTGGAATCTAATCTTTTTTGGCTATAAAACTAACCAATCTTACCCGTTATATTACATTCAGGTGTGAAACAATTCTCCAACCTGGTTCTAACTGCAACATACGAATAGAGAAGAATACTGCCAAGAAACGTCGAAGACACAAAAAAGGCAGTAATTTGACACAGAATGTTGTGGCGTATTATTGCCACTACTGCTCATGTAGGAACATAAAGAGAGGGACTCCCAAAGGCCATATGAAAGTGCTTTATGGCACAGAGTGTGTAAGCAAGGTAAAATCTGTGGTTGTCAAGGATGGTAAAGAATGTGAAAACAAGATTTTTACCATGGATACTCCTAAAATTCCTCCTCTTACAACTGTAGACTGTCTAACTATCGACACTCCTGCAATTCCTTCTTTGTCAACAACTAGAGACGATCTAACCATTGATACCAGTGCAATTTCTCCAACTGGGGACATTTCTGTTGTTGATGGCCCTGCTATTTCGTCTCCTAGAACAACTCCTGCAATTTCTTCCACCTTGAGCGTAACAAGTATATCAAGATCGCAAGTTAGGGACATTCCTACTTTAGATGCTCCTGCAACTCCTCTCACCTTGACTGGAATGACTCTGTTGGATTCGAAGAGGAGAAAGAGGAAGAAACCGTCATCCAAGAATCAAACTGAACCTGAGAGTTGTTCTGGTCCAACATCACATGGGGAAACAAGCGAAGGCACATCCAAAAGGAAGCGTAATAGAAAATCATGGACAAGTTTGAAGGAAATTGCTCAAAGGGAGGAAGAGAGAGGTAAACAAAACGTGGCTGGATTGGCAATTCCATTCTCCCTGTTAGAGACCTAATAA TGCTCCTTCATCCACCCTGGTTTCTTCCTTCTCCCTCACAGCCGGTGACAACCAACTACCGCCGCACCAACCCCACTCCCTTCTCGGTCGTCGGAGAACCCCTCTATCAATTTTCTTTCTCCTCAACCTGCCATTTGTCTATTTCCCTACTTTTCTCGTTTTCGCCCGTCTCCGATTCTCACTCTTTCTTCTTCGTGCCGTCCGCCTCGTCAAGGAATCACGTTTTGAATTCATAAGCACTTTCAACTGAATTTCTATTATTAACATGGCGAGGAAGAAGAGTAATACGAATAGAGGATCATCCAACCCCGGATTCGGTCCTCAAAATTCCATCACTCTAAGACAGGAAGCTACTGGGAAAATCAAACCCAAAGTATCTAACAATGCCAAAGTTTATTTGAATCATTTGGAAAATTTAGCGACTTGGGCTAGTGGGCAACCGTCTTTACCTTCATTGGCTGCTTTCTTTGGGCAACGTCTTGCTGCTGCAGCCGAGTCTTTGGCGGTTTCTCCTGACCCTTCTCTATTTCTCTGCGCGAGGTGTGAAACAATTCTCCAACCTGGTTCTAACTGCAACATACGAATAGAGAAGAATACTGCCAAGAAACGTCGAAGACACAAAAAAGGCAGTAATTTGACACAGAATGTTGTGGCGTATTATTGCCACTACTGCTCATGTAGGAACATAAAGAGAGGGACTCCCAAAGGCCATATGAAAGTGCTTTATGGCACAGAGTGTGTAAGCAAGGTAAAATCTGTGGTTGTCAAGGATGGTAAAGAATGTGAAAACAAGATTTTTACCATGGATACTCCTAAAATTCCTCCTCTTACAACTGTAGACTGTCTAACTATCGACACTCCTGCAATTCCTTCTTTGTCAACAACTAGAGACGATCTAACCATTGATACCAGTGCAATTTCTCCAACTGGGGACATTTCTGTTGTTGATGGCCCTGCTATTTCGTCTCCTAGAACAACTCCTGCAATTTCTTCCACCTTGAGCGTAACAAGTATATCAAGATCGCAAGTTAGGGACATTCCTACTTTAGATGCTCCTGCAACTCCTCTCACCTTGACTGGAATGACTCTGTTGGATTCGAAGAGGAGAAAGAGGAAGAAACCGTCATCCAAGAATCAAACTGAACCTGAGAGTTGTTCTGGTCCAACATCACATGGGGAAACAAGCGAAGGCACATCCAAAAGGAAGCGTAATAGAAAATCATGGACAAGTTTGAAGGAAATTGCTCAAAGGGAGGAAGAGAGAGGTAAACAAAACGTGGCTGGATTGGCAATTCCATTCTCCCTGTTAGAGACCTAATAA ATGGCGAGGAAGAAGAGTAATACGAATAGAGGATCATCCAACCCCGGATTCGGTCCTCAAAATTCCATCACTCTAAGACAGGAAGCTACTGGGAAAATCAAACCCAAAGTATCTAACAATGCCAAAGTTTATTTGAATCATTTGGAAAATTTAGCGACTTGGGCTAGTGGGCAACCGTCTTTACCTTCATTGGCTGCTTTCTTTGGGCAACGTCTTGCTGCTGCAGCCGAGTCTTTGGCGGTTTCTCCTGACCCTTCTCTATTTCTCTGCGCGAGGTGTGAAACAATTCTCCAACCTGGTTCTAACTGCAACATACGAATAGAGAAGAATACTGCCAAGAAACGTCGAAGACACAAAAAAGGCAGTAATTTGACACAGAATGTTGTGGCGTATTATTGCCACTACTGCTCATGTAGGAACATAAAGAGAGGGACTCCCAAAGGCCATATGAAAGTGCTTTATGGCACAGAGTGTGTAAGCAAGGTAAAATCTGTGGTTGTCAAGGATGGTAAAGAATGTGAAAACAAGATTTTTACCATGGATACTCCTAAAATTCCTCCTCTTACAACTGTAGACTGTCTAACTATCGACACTCCTGCAATTCCTTCTTTGTCAACAACTAGAGACGATCTAACCATTGATACCAGTGCAATTTCTCCAACTGGGGACATTTCTGTTGTTGATGGCCCTGCTATTTCGTCTCCTAGAACAACTCCTGCAATTTCTTCCACCTTGAGCGTAACAAGTATATCAAGATCGCAAGTTAGGGACATTCCTACTTTAGATGCTCCTGCAACTCCTCTCACCTTGACTGGAATGACTCTGTTGGATTCGAAGAGGAGAAAGAGGAAGAAACCGTCATCCAAGAATCAAACTGAACCTGAGAGTTGTTCTGGTCCAACATCACATGGGGAAACAAGCGAAGGCACATCCAAAAGGAAGCGTAATAGAAAATCATGGACAAGTTTGAAGGAAATTGCTCAAAGGGAGGAAGAGAGAGGTAAACAAAACGTGGCTGGATTGGCAATTCCATTCTCCCTGTTAGAGACCTAA MARKKSNTNRGSSNPGFGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPSLPSLAAFFGQRLAAAAESLAVSPDPSLFLCARCETILQPGSNCNIRIEKNTAKKRRRHKKGSNLTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKIFTMDTPKIPPLTTVDCLTIDTPAIPSLSTTRDDLTIDTSAISPTGDISVVDGPAISSPRTTPAISSTLSVTSISRSQVRDIPTLDAPATPLTLTGMTLLDSKRRKRKKPSSKNQTEPESCSGPTSHGETSEGTSKRKRNRKSWTSLKEIAQREEERGKQNVAGLAIPFSLLET*
BLAST of Cucsa.106820 vs. TrEMBL
Match: A0A0A0KUP1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G048010 PE=4 SV=1) HSP 1 Score: 700.7 bits (1807), Expect = 9.2e-199 Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 1
BLAST of Cucsa.106820 vs. TrEMBL
Match: M1AWZ4_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400012342 PE=4 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 4.6e-49 Identity = 133/355 (37.46%), Postives = 192/355 (54.08%), Query Frame = 1
BLAST of Cucsa.106820 vs. TrEMBL
Match: K4CPA2_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 3.9e-48 Identity = 137/378 (36.24%), Postives = 198/378 (52.38%), Query Frame = 1
BLAST of Cucsa.106820 vs. TrEMBL
Match: M1A5Y5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG403005999 PE=4 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 6.7e-48 Identity = 145/380 (38.16%), Postives = 196/380 (51.58%), Query Frame = 1
BLAST of Cucsa.106820 vs. TrEMBL
Match: A0A0K9RR07_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_038900 PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 2.5e-47 Identity = 133/349 (38.11%), Postives = 178/349 (51.00%), Query Frame = 1
BLAST of Cucsa.106820 vs. TAIR10
Match: AT5G41270.1 (AT5G41270.1 RNAse P, Rpr2/Rpp21 subunit (InterPro:IPR007175)) HSP 1 Score: 127.1 bits (318), Expect = 2.1e-29 Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 1
HSP 2 Score: 44.7 bits (104), Expect = 1.4e-04 Identity = 43/122 (35.25%), Postives = 58/122 (47.54%), Query Frame = 1
BLAST of Cucsa.106820 vs. NCBI nr
Match: gi|449457658|ref|XP_004146565.1| (PREDICTED: uncharacterized protein LOC101220608 [Cucumis sativus]) HSP 1 Score: 700.7 bits (1807), Expect = 1.3e-198 Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 1
BLAST of Cucsa.106820 vs. NCBI nr
Match: gi|659102242|ref|XP_008452026.1| (PREDICTED: uncharacterized protein LOC103493157 [Cucumis melo]) HSP 1 Score: 634.8 bits (1636), Expect = 8.9e-179 Identity = 315/347 (90.78%), Postives = 326/347 (93.95%), Query Frame = 1
BLAST of Cucsa.106820 vs. NCBI nr
Match: gi|645266916|ref|XP_008238833.1| (PREDICTED: uncharacterized protein LOC103337456 [Prunus mume]) HSP 1 Score: 240.7 bits (613), Expect = 3.8e-60 Identity = 146/370 (39.46%), Postives = 203/370 (54.86%), Query Frame = 1
BLAST of Cucsa.106820 vs. NCBI nr
Match: gi|694400582|ref|XP_009375376.1| (PREDICTED: uncharacterized protein LOC103964201 [Pyrus x bretschneideri]) HSP 1 Score: 223.4 bits (568), Expect = 6.2e-55 Identity = 138/332 (41.57%), Postives = 185/332 (55.72%), Query Frame = 1
BLAST of Cucsa.106820 vs. NCBI nr
Match: gi|697095628|ref|XP_009612264.1| (PREDICTED: uncharacterized protein LOC104105616 [Nicotiana tomentosiformis]) HSP 1 Score: 221.9 bits (564), Expect = 1.8e-54 Identity = 145/343 (42.27%), Postives = 196/343 (57.14%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |