Cp4.1LG14g02140 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG14g02140
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	RNase P Rpr2/Rpp21 subunit domain protein
Location	Cp4.1LG14 : 3187143 .. 3195743 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGAAATAAGAAATAAAATCTAAAAACAAAGCTATTAGACAGGATTTGTTCTTCGCGCCGTTCGCTTCGTCTGGGTTTCCCGTTTCCGCCTTTGTCTCCGATTGTCACTTTTTTCAGTCTTTCTTCTTCGCGCCGTTCGCTTCGTCTCTCTTTCTCTCTCAAGAGTTCGTTGTTCGTCAAGGAATCATGCTGTAAGCTCATGAGTTGATTGAGCTGAATTTCTGTTCTTGACATGGCGAAGAGGAAGGGAAATACGAAGAAAGGAGCGTCTAACCCCACATCCGGTCCGCAAGATTCGATCACTATTAGACAGGAAATCACTGGGAAATTCAAACCCAAAGTCTCTAACAATGTCAAAACTTATTTGAATCATTTGGAAAACCTAGCGACTTGGGCTAGTGGGAAAGCCTCTATTCCTTCATTGGCTGCTTTCTTTGGGCAGCGCCTCGCTACTGCAGCAGAGTCCTTGGCGGTCGCTCCCGACGCTTCTTTGTTTACTTGTCAGAGGTCCGTATGTTTTCTGCCCTTTACATTCGTTTGGCTTTGCGCATCTAGATTTGTTGTTTTCGTAGTGTTTATACATGGGTAAGTCCATGAAGATCGATTGTATTTGGGATGGTTTAAATTTTCTGATTAGTTCTAAATGGCACCAATCTGATGTAAACGACATTTGAATATCGAGATTTGACGCAAATTTTGTTTAACTGCAAATTATGATGTGGAAGGGATAGGGTAAGGTGCTTGGAATTATGGCTGTATTGTGAGTGATTTTAGGGGTTCTGTTGTGCAATGTACCAGCAGTTTGTGGACGCTTTGGCTCTTCTAGCTTCTTATTACATACTTAGGTTTTCATATTTTGTCCTGGAGTTTGTATTGTAGCAAGGTTGGGAGTGTAAGCTTGTGAATTGTACTATCTTATTTGGGCATATGCCCTTTGGTGACAATCAGATAACCAAAGAGGCTTAAGTTTTGGGAACTCATGAAGGAAAAAGTCTTAATCAAGCTTCATAAATGGAGGTAATCATCCAAAGAGGGATGCTGGACTTTGTTTGTCGTAGTCCTAGTAAAATGCCTACCTTTTTTATGTGCATCTCGTGATGCTGAGGAAAATGAGGAACTTTCTTTGGAATGGTTCTTTAGAGAGAAAGCGCAGCGATCTAGTGAATAGGAAGGCAGTATCCTTGTCCTTTTTAAATGAAAGGTTCGGAATTGGAAACTTGAGACGAGGCGATGAAGCCCTTATGGAAAACTGGGTTTGGTATTGCTAAGGAGAACCTGGCTTAATCAAGCACAAAATAGTGCATAGAGTTTGGAGAGGATGCAAGAAGGAATGAGCCATGCACACACTGGAATATAACGACTAAGAGAAATCGTTCGAATGAAGAATTGAAGAGTTCCATGCTATTTTGAGACTGCTGGAAAACAGGGTTATTGGAGTGGATGAAATAAGCTGGAATAAGGTAGCTCTGGTGTTCTCATTCAAATCTCTAGCTTTGTCAGACAGAGAGTTCATGAGAGGTATAGAAATAGAGCTTTCAGAGGTAGTGTAAAAAAGAACATGCCACAAATAGATCAAAACGTTAGAGTGAATAGCCTGCCTAAGTGGTCTTTTTTGTTGTTTTTATTTTTTTAGGACGTTACAATAAAAACGTCCTATGGTGATCTTGAATCTGTATATGCTCATTATCCTAGGAAGAGTATAAAGGAACCAACCACCTTTTCTTCCATTTCTCATTTGTCGATTGAATTTGGAGCTCGTTAGTCATTATTATAAAATTTTCGGATGCCTTGGGGTTTTTCATTGATCTTTGAAGGCTTACATATCCCTTCTACTAATGGGGTCCGTCTCTGAAGGGAAAAACCAGGAAGCTATGGCCAGTGCAATCAAATCTGTTCTTTGGAGCCTGTGGATTGAGAAGAAAAAAGAAAGCATTTAACATCGAGGCTAAAGACTGGTTTGAGGTGCATGAGTTTGTTTAGTTTCATTGTGTGAGATTCCACGTCGATTGGAGAGGGGAACGAAACATTCCTTATATGAGTGTGGAAACCTCTCAGATGCGTTTTAAAAACCTGGAAGAGAAACCCGAAAGAGAAAAACCAAAGAGGACAATATTTGCTAGTAGTGAGATTGAGTTGTTACAAATGGTATCAGAGCTAGACACGGGCGGTGTGCCAGCGAGGATGCTGGGCCACCAAGGGGGGTGAATTGTGAGATCCCACGTTGGTTAGAGAGGGGAACAAACCATTCCTTAAAAGAGAGTGGAAACCTCTCCCTAGTAGACACGTTTTAAAAACTTAAAACCTTGAGGGGATGCCTGAAAGGGAAAGACCAAAGAGGACAATATTTGCTAGCGGTGGGCTTGGGCTGTTACAAATGGTATCAGAGCTAGACACCGAGTCATATGCTAGCGAGGACGCTGACTCTCAAGGGGGGTGGATTGTGAGATCCCACATTGGTTGGTGAGGGGAACAAAATATTTCTTATAAGGGTGTGAAAACCTCTACCTAGCATACGTGTTTTAAAAACCTTGAAGGGAAGCCCGAAAGAGAAAGCCCAAAGAAGACAATATTTACTAGCAGTGGGCTTGGGCTTGGGCTGTTACACATTCTTATTTAATATTTCATATTTCCTTAGATAGTGGGTTCAACAACTCTATTCCCCTTGTAGCTAATAATAATTGAGAGGTGGGTTTTTGTAGTAACTTCAACTAACACCTTAGCTATGATGACAGAATTCTCTTCTATCTCCTATCACTTCCATGGAACTCATAATCAAAAATGTTTGCACGTATCTCATTAGACAAGCCTGAGCATTATAATATGCTCATTGACGCTTATTGTTAAATTTTTACCCTTACTTCGGAAAAAGAAACCTACTGATGTTTTAATTCAATGAATGGAGTGGGCAATCAACTCGAACCATATAGCAGTTTCATGTTAAGGACTTTTATCATGTCACATTTGAATGTTGTCTGCTTTGGCTACAAAACTAGCCAATCTTACCTGCTCTATTATATTGCATTCAGGTGTGAAACGATTCTTCAACCTGGCTCTAACTGTTCTATACGAATAGAGAAGAATAACACCAAGAGACGTCGAAGACAGAAGAAATGTAGTAATTCGACACAGAACAATGTGGCGTATTATTGCCACCACTGCTCGTGTAGGAACATAAAGAGAGGAACTCCCAAAGGCCATATGAAAGTGCTATACGACGCAGCGTTTGAAAGAAGGGTGAAGCCTGTGGATGTCAAGGATGGTCAAGAATGTGAGACATCTGCAGTGGAGAAGCCAACTGAGATTCTTACCATTGATGCTCCTAAAATTCCTGATGCTTCTGCAATTCCTCCTCCAACTGGGGACATCACTGCTCTTGATAACCCTGCAATTCAGCTTCGAACCAAGGCCATTCTTAATATTAATTCTCCAGCAACTCCATCCACCCTGAGCGTAACGACTTTGTCGAAATCGCAGAAACAGGAAATGACGACATTATCTGAGAAACATATAGGACACGAGATTAGAACAGACAAGGAGAAGAAAACTGGGGCTGTTCCTACTGTTGATACACCCGCCACCCCTTCCACCTCGACCGGAGTGACTCTGTTGGATTCGAAGAAGAGAAAGAGGAACAAGCCATCGTCTAAGAATCAAACTGATCCCGGAAGTTGCTCTGCTCCAACAGCAGATGGGGATAGAAGTGAAGGCACATCCAAAAGGAATCGTAAAAGAAAATCATGGACAAGTTTGAAGGAAGTTGCTCGGACGAATGAACAGAGTGGTAAACAAAAAAACATGGCTGAATTGGCAATTCCATTCTCCTTGTATTAAGGCACTGATTTAATGAATGTTTGTGTGAGGAATTGATTCTATTTTATACCTTCTCTTTCAGCATTTCTTTGGTTTTCAAGTGGGATGATTTGAATTTGCCATTGTAGACTGATTGAGGGTAGATCTTCGAATTAGGGTTTTAGCTCGATTATAAAAAGTACCCGTTTGAAAATTACTCCTATTCTTTTTGAAATTGTAATACATTTGACGATTCATAAACGTTTCAACTTATAGTAGAAATTCATTTGGCTGTTTACGGACTAGTTATTGAGATCTGAAGCATGTTTTAAGATGAATTTGGGAGCCATTAGAGTTATAATTTTTTTCAATCCAATTTCATCCTTTAATATTACTTAGTTTTTCAGACTTTATGGATTAGAATTAAGGAGACAAATGGAATACTTTATGATCGATTTTCATTATATTTCACTAATTTCCTAAACGAGGCGTAGGTCGGAAAACATCGAGAAATGGAGCAATCCCCATCGGATTCTTCGACGAGCATCGAACCCGGACGTCAGATTCCGGCGACATCCCCAAATTCGGCCATTCCCGAGACGCCCACTTGTTCTGTTCTTGAGGACTGCACCAGACCCAGATCTTCGTTGAGCCATACCGAGATTTTCAAAGCCATTGATGTCGTCGAGAAGGACTCTCTCGCCATTGCCGAGAGCTTTACCTCTCTCTTCGCTTCCCTGCGTTCGACTCTCTCCGAGGTCTCATAGTTTTTGCATCCTTCTTCTTTTACGCCCCATTTTCATTTTGCTTTAATATGTTGAAGATCGGATGAATGAGTTTTGAGTTTTGAGTTTGAGTACTTCACCAGATTTGATTATTACTGGACGAACCTGATTTTATCCCCTTTAATAATGACTGGAATTTACCACTCTAGCATGAATTTCTGGAGCAATGATTCTGGGTTTCCTCTTGTCAAGCAGTTTATCTGAGTGGAAATAGTATAATCTTGTAGGTCACCAGCAACTCTATTGATCATATGCATTGCTTCAACGATGCTGCAGGCCGCCTTCAAGAATCTGGTAAGTCAACATAGTAATGATTTTGATTCACAGGAATGGCTGAGTATGATGGCAGTTTAGATGTGTCATTGTCTACTACTGTTACTACTAAACTGATTACATTCATGGGTACTTCTTCCTGTATGAATCAAAATTCTATCTGTTTATCTTTATGTTCTGTGAGATCCCACATCGGTCGGAGAGGGGAACGAAACATTCCTTATAAGGATGTGGAAACCTCTTCCTAGCAGACGTGTTTTAAAACCATGAGGCTAACGGCGATGTGTAACGGGCCAAAGCAGACAATGTCTGCTAATAGTAGACTTGGGCTATTACATGTCCATTATTCTGTTCTAGAATCTGTGTTATGTGATCGGCCTTTGTGCCAGTTTTTGTACTAAATTTGGAAAGAGATTAGTTGCAATCAGTTCTCTCCCATACTACTAACAAAGACCTTGTTTTTCATCTGATGGTCTTTGACATGAGTTCTCTTCTATTCTTTCAACCTTGTAGTGCTTGATGCGGCAACAAAGGGTAATCGATACATAAATTCTTCCTTGAGGTATGCTTCAATGTCTTCTGGTATCTCCTTTGCTCTATAGGTTTCAATTTCTTTGCTGTCAGTATTTTCTATGACTAATAACTTAAATATTTTACTCATTTGTCAAAATGTGATTGCTCTGTGAATGTTGTAGCTTTTTACAACCTGCTGCATAAAATGATACATGAAAATTCTTGAACCAAGTTCTAGTAGGAGATTAGATTGAAACACGCACATAAAAAAAAGTTTCTTTATTGTTAAAAGATTCTATCCCAAGGGTCCAAAATTATAGTTTAATCTAAAAGAGGTTGTTTGTAACGGCTCAAGCCCACCGCTAGCAGATATTGTCTCTTTGGGCTTTCCCTTAAGATTTTTAAAACACGTCTGCTAGGGAAAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCCCCTCTCCAACTGATGTGGGATCTCACAATGTACCCCCTTTGGGACCCAGCGTCCTCGCTAACACACGTTCCCCTCTCCAATCGATGTGGGACCCCAATCTACCCCCCTTCGGGACCCAACGTCCTTGTTAGCACACCGCCTCGTGTTCACTCCCTTCGGGACCCAACGTCCTTGTTGTTACTCTTTTGCTTGCATATATAACACATCTTTCAAAACCTCTTCTTCGAAAATCTCTCTCTGCCCTCATTTTCTAAAACCTTCTTCTTAAACCGAGGTCAAAGGCTCGAGCATACGTCGCTTAGCCATAAGTGACGTAAGAACAAATTGGCTTAGCTCACTTGTGGTTGGGAAGTGAGTGCCACACAATCGCAAGTCCGCTGCCATCAAAAGTACGATTGTGACACCAGGCACCTAAATAATTGTGGATATAACTGTTACTTGGTAGTCTTCTGCAAAAATTATTAAGAAATGAAAGAACAGCATAAAAGTTTTGAGAGATATTTATTAATGTAATGATAAAAACTACAACTTAGGCGCTTTGAGAAACTATTTGGTGTATCTCTGTGATAATGAGGATGGGAAGTGAGTGCCACACAATCGCAAGTCCGCTGCCATCAAAAGTACGATTGTGACACCAGGCACCTAAATAATTGTGGATATAACTGTTACTTGGTAGTCTTCTGCAAAAATTATTAAGAAATGAAAGAACAGCATAAAAGTTTTGAGAGATATTTATTAATGTAATGATAAAAACTACAACTTAGGCGCTTTGAGAAACTATTTGGTGTATCTCTGTGATAATGAGGAGTAAGTCCTCTTGATGAGTCCTCTGTTAGTTTGATTGTGTTCATAGTTTTTTTAGTGTGAAATTATATAGTTCTTCAATAGATGTTGGATGGCTGTCCCTGACTACAAATCTGCATAGCTATCACATAGAACTCTCTTTAATGTGATCCGAAGGGAACATAAGATTTAGAAAAGTTTAGTATATTGGCAGAGTTGTGTTTGTACTATCAATGATTGATCATAAGTTAGTAGAAATCAAATCAATGTGTCTTTTTACTTGTATTAATTATGACTCCGACTATGTTGTTTCACAAGTGAAGTTAGTCAATGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAACAAATGCGTTTTAAAAACCTTGAGGGGAAAATCAAAAGGGAAAGGCCAAAGAGGACAGTATCTATTAGCGGTGGGCTTGGATTGTTACAAGTAGTATTAGAGCCAGACACCAGGCGATGTGCCAACGAAGAGGTTGAGCCCCAAAGAGGGGTGGACACGAGGCGGTGTGCCAGCAAGGACACTGGGTCTCGAAGAGGGGTGGATTAGGGGGTTCCACATTGATTGGAGAAGGGAACAAGTGTCAGCAAGGACGCTGAGTCCCGAACGGGGGTGGATTGTAAGATCCCACATCGGTTGGGGAGGAGAACAAAGCATTCCTTATAAAGGTGTGGAACCCTCTCCCTCACAAACGCGCTTTAAAAACCTTGAGGGGAAACTCAAAAAGGAAAGGCCAAAGAGGACAGTATCTATTAGCGGTGGGCTTGGATTGTTACAAATAGTATTAGAGCCAGACACCGGATGATGTGCCAACAATGAGGCTGAGCCCCGAAGAGGGGTGGACACGAGGGGGTGTGCCAGCAAGGACGCTGGGTCTCGAAGAGGGGTGGATTAAGGGGTCCCACATTGATTGGAGAAAGAAACGAGTGCCAGCGAGGATGCTGGGCCCTGAAGGGGGTGGATTGTGATATCCCACATTAGTTGGGGAGGAGAACGAAACACCCTTTATAAGGGTGTGGAAACCTTTTCCTAGCAGACGCGTTTTTGGTAAAAACTCAAAGAGAACAGTATCTGCTAGTGGTGGGCTTGAACAGTCAACTAATGGAATTAGTCTAGTTCATCTGTATGATTCAAAATCATTAAGATCTCTTATAAATTTCAAGTCCATTCGCCCTTAATTTCCATTATACATATCTTTATACTATCTGATAATGATTAGTAAATCACAATTTCACATCTTAAAGATAATCATATGGCCGATGCTGTAACTTTGGACTGTATTTTGTTGTGTTTTCAGATTGAATCAGGAAATGAAAGGCATGGACAATCTAGCTGCTCAGCTGTATCCTTTCTATTTCATGCCTAGTAGACCATTTTAATGCTTTAGCTCTTTAGAATTGGGAACCTGAGCATACTAATACTTCTTTATCTGATATCTAAGTCCTCTGCATTACCCATTTCCTTAATTCTTGGTTAGAAAGATTTTGAGGAAGAATGTTGATGAACTAGACTTGGCTGTGAACAAGCTCCTAAATTTTCCATGAGGCTTGGCTTGGTCGTAGTTCTTGCAAGCTCGAGGATTATCGTTTCAGTAGAGAGCGAGAACACGGTTCATGTCGAAGAAGTCACTAGGCAGCTAGAATACAGTACATGAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANTGCATAGCTTCCTTCACATTTTACTTTAGGAAGCATCTCATTGCATGGTTGATGTACTTATGGGGATATGAATAAGCTTACTGGATTCAATAATCAGTGTCTCTTTTCTTTACAGGAGGTTATTCAGCTTTTGAAAATTGCCCATCTTGCATATTTTTTACTGTGGTGTTTTATTTGAGATCACTGTGGTGTTTTATTTGAGATCGAATGTGATGTAACATATTGGTCGGGGAGGAGAATGAAACACC

mRNA sequence

AGGAAATAAGAAATAAAATCTAAAAACAAAGCTATTAGACAGGATTTGTTCTTCGCGCCGTTCGCTTCGTCTGGGTTTCCCGTTTCCGCCTTTGTCTCCGATTGTCACTTTTTTCAGTCTTTCTTCTTCGCGCCGTTCGCTTCGTCTCTCTTTCTCTCTCAAGAGTTCGTTGTTCGTCAAGGAATCATGCTGTAAGCTCATGAGTTGATTGAGCTGAATTTCTGTTCTTGACATGGCGAAGAGGAAGGGAAATACGAAGAAAGGAGCGTCTAACCCCACATCCGGTCCGCAAGATTCGATCACTATTAGACAGGAAATCACTGGGAAATTCAAACCCAAAGTCTCTAACAATGTCAAAACTTATTTGAATCATTTGGAAAACCTAGCGACTTGGGCTAGTGGGAAAGCCTCTATTCCTTCATTGGCTGCTTTCTTTGGGCAGCGCCTCGCTACTGCAGCAGAGTCCTTGGCGGTCGCTCCCGACGCTTCTTTGTTTACTTGTCAGAGGTGTGAAACGATTCTTCAACCTGGCTCTAACTGTTCTATACGAATAGAGAAGAATAACACCAAGAGACGTCGAAGACAGAAGAAATGTAGTAATTCGACACAGAACAATGTGGCGTATTATTGCCACCACTGCTCGTGTAGGAACATAAAGAGAGGAACTCCCAAAGGCCATATGAAAGTGCTATACGACGCAGCGTTTGAAAGAAGGGTGAAGCCTGTGGATGTCAAGGATGGTCAAGAATGTGAGACATCTGCAGTGGAGAAGCCAACTGAGATTCTTACCATTGATGCTCCTAAAATTCCTGATGCTTCTGCAATTCCTCCTCCAACTGGGGACATCACTGCTCTTGATAACCCTGCAATTCAGCTTCGAACCAAGGCCATTCTTAATATTAATTCTCCAGCAACTCCATCCACCCTGAGCGTAACGACTTTGTCGAAATCGCAGAAACAGGAAATGACGACATTATCTGAGAAACATATAGGACACGAGATTAGAACAGACAAGGAGAAGAAAACTGGGGCTGTTCCTACTGTTGATACACCCGCCACCCCTTCCACCTCGACCGGAGTGACTCTGTTGGATTCGAAGAAGAGAAAGAGGAACAAGCCATCGTCTAAGAATCAAACTGATCCCGGAAGTTGCTCTGCTCCAACAGCAGATGGGGATAGAAGTGAAGGCACATCCAAAAGGAATCGTAAAAGAAAATCATGGACAAGTTTGAAGGAAGTTGCTCGGACGAATGAACAGAGTGGTAAACAAAAAAACATGGCTGAATTGGCAATTCCATTCTCCTTGTATTAAGGCACTGATTTAATGAATGTTTGTGTGAGGAATTGATTCTATTTTATACCTTCTCTTTCAGCATTTCTTTGGTTTTCAAGTGGGATGATTTGAATTTGCCATTGTAGACTGATTGAGGGTAGATCTTCGAATTAGGGTTTTAGCTCGATTATAAAAAGTACCCGTTTGAAAATTACTCCTATTCTTTTTGAAATTGTAATACATTTGACGATTCATAAACGTTTCAACTTATAGTAGAAATTCATTTGGCTGTTTACGGACTAGTTATTGAGATCTGAAGCATGTTTTAAGATGAATTTGGGAGCCATTAGAGTTATAATTTTTTTCAATCCAATTTCATCCTTTAATATTACTTAGTTTTTCAGACTTTATGGATTAGAATTAAGGAGACAAATGGAATACTTTATGATCGATTTTCATTATATTTCACTAATTTCCTAAACGAGGCGTAGGTCGGAAAACATCGAGAAATGGAGCAATCCCCATCGGATTCTTCGACGAGCATCGAACCCGGACGTCAGATTCCGGCGACATCCCCAAATTCGGCCATTCCCGAGACGCCCACTTGTTCTGTTCTTGAGGACTGCACCAGACCCAGATCTTCGTTGAGCCATACCGAGATTTTCAAAGCCATTGATGTCGTCGAGAAGGACTCTCTCGCCATTGCCGAGAGCTTTACCTCTCTCTTCGCTTCCCTGCGTTCGACTCTCTCCGAGGTCACCAGCAACTCTATTGATCATATGCATTGCTTCAACGATGCTGCAGGCCGCCTTCAAGAATCTGTGCTTGATGCGGCAACAAAGGGTAATCGATACATAAATTCTTCCTTGAGATTGAATCAGGAAATGAAAGGCATGGACAATCTAGCTGCTCAGCTAAAGATTTTGAGGAAGAATGTTGATGAACTAGACTTGGCTGTGAACAAGCTCCTAAATTTTCCATGAGGCTTGGCTTGGTCGTAGTTCTTGCAAGCTCGAGGATTATCGTTTCAGTAGAGAGCGAGAACACGGTTCATGTCGAAGAAGTCACTAGGCAGCTAGAATACAGTACATGAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANTGCATAGCTTCCTTCACATTTTACTTTAGGAAGCATCTCATTGCATGGTTGATGTACTTATGGGGATATGAATAAGCTTACTGGATTCAATAATCAGTGTCTCTTTTCTTTACAGGAGGTTATTCAGCTTTTGAAAATTGCCCATCTTGCATATTTTTTACTGTGGTGTTTTATTTGAGATCACTGTGGTGTTTTATTTGAGATCGAATGTGATGTAACATATTGGTCGGGGAGGAGAATGAAACACC

Coding sequence (CDS)

ATGGCGAAGAGGAAGGGAAATACGAAGAAAGGAGCGTCTAACCCCACATCCGGTCCGCAAGATTCGATCACTATTAGACAGGAAATCACTGGGAAATTCAAACCCAAAGTCTCTAACAATGTCAAAACTTATTTGAATCATTTGGAAAACCTAGCGACTTGGGCTAGTGGGAAAGCCTCTATTCCTTCATTGGCTGCTTTCTTTGGGCAGCGCCTCGCTACTGCAGCAGAGTCCTTGGCGGTCGCTCCCGACGCTTCTTTGTTTACTTGTCAGAGGTGTGAAACGATTCTTCAACCTGGCTCTAACTGTTCTATACGAATAGAGAAGAATAACACCAAGAGACGTCGAAGACAGAAGAAATGTAGTAATTCGACACAGAACAATGTGGCGTATTATTGCCACCACTGCTCGTGTAGGAACATAAAGAGAGGAACTCCCAAAGGCCATATGAAAGTGCTATACGACGCAGCGTTTGAAAGAAGGGTGAAGCCTGTGGATGTCAAGGATGGTCAAGAATGTGAGACATCTGCAGTGGAGAAGCCAACTGAGATTCTTACCATTGATGCTCCTAAAATTCCTGATGCTTCTGCAATTCCTCCTCCAACTGGGGACATCACTGCTCTTGATAACCCTGCAATTCAGCTTCGAACCAAGGCCATTCTTAATATTAATTCTCCAGCAACTCCATCCACCCTGAGCGTAACGACTTTGTCGAAATCGCAGAAACAGGAAATGACGACATTATCTGAGAAACATATAGGACACGAGATTAGAACAGACAAGGAGAAGAAAACTGGGGCTGTTCCTACTGTTGATACACCCGCCACCCCTTCCACCTCGACCGGAGTGACTCTGTTGGATTCGAAGAAGAGAAAGAGGAACAAGCCATCGTCTAAGAATCAAACTGATCCCGGAAGTTGCTCTGCTCCAACAGCAGATGGGGATAGAAGTGAAGGCACATCCAAAAGGAATCGTAAAAGAAAATCATGGACAAGTTTGAAGGAAGTTGCTCGGACGAATGAACAGAGTGGTAAACAAAAAAACATGGCTGAATTGGCAATTCCATTCTCCTTGTATTAA

Protein sequence

MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKASIPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNTKRRRRQKKCSNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGQECETSAVEKPTEILTIDAPKIPDASAIPPPTGDITALDNPAIQLRTKAILNINSPATPSTLSVTTLSKSQKQEMTTLSEKHIGHEIRTDKEKKTGAVPTVDTPATPSTSTGVTLLDSKKRKRNKPSSKNQTDPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSLY

Homology

[Close]

BLAST of Cp4.1LG14g02140 vs. TrEMBL
Match: A0A0A0KUP1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G048010 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 1.3e-107
Identity = 230/378 (60.85%), Postives = 264/378 (69.84%), Query Frame = 1


Query: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60
           MA++K NT +G+SNP  GPQ+SIT+RQE TGK KPKVSNN K YLNHLENLATWASG+ S
Sbjct: 1   MARKKSNTNRGSSNPGFGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60

Query: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNTKRRRRQKK 120
           +PSLAAFFGQRLA AAESLAV+PD SLF C RCETILQPGSNC+IRIEKN  K+RRR KK
Sbjct: 61  LPSLAAFFGQRLAAAAESLAVSPDPSLFLCARCETILQPGSNCNIRIEKNTAKKRRRHKK 120

Query: 121 CSNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGQECETSAVEK 180
            SN TQN VAYYCH+CSCRNIKRGTPKGHMKVLY      +VK V VKDG+ECE      
Sbjct: 121 GSNLTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKIFTM 180

Query: 181 PT---------EILTIDAPKIP-----------DASAIPPPTGDITALDNPAIQLRTKAI 240
            T         + LTID P IP           D SAI  PTGDI+ +D PAI       
Sbjct: 181 DTPKIPPLTTVDCLTIDTPAIPSLSTTRDDLTIDTSAI-SPTGDISVVDGPAISSPR--- 240

Query: 241 LNINSPATPSTLSVTTLSKSQKQEMTTLSEKHIGHEIRTDKEKKTGAVPTVDTPATPSTS 300
               +PA  STLSVT++S+SQ ++                       +PT+D PATP T 
Sbjct: 241 ---TTPAISSTLSVTSISRSQVRD-----------------------IPTLDAPATPLTL 300

Query: 301 TGVTLLDSKKRKRNKPSSKNQTDPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTN 359
           TG+TLLDSK+RKR KPSSKNQT+P SCS PT+ G+ SEGTSKR R RKSWTSLKE+A+  
Sbjct: 301 TGMTLLDSKRRKRKKPSSKNQTEPESCSGPTSHGETSEGTSKRKRNRKSWTSLKEIAQRE 347

[Close]

BLAST of Cp4.1LG14g02140 vs. TrEMBL
Match: M5WDZ3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018166mg PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 8.1e-49
Identity = 152/400 (38.00%), Postives = 216/400 (54.00%), Query Frame = 1


Query: 2   AKRKGNTKKGASNPTSGPQDSITIRQEITGKFK---PKVSNNVKTYLNHLENLATWASGK 61
           AKR GNT  G++N       +I++R+E+TGK +   P V+      L HL+ LA WA G+
Sbjct: 7   AKRTGNTAYGSNN-------TISLREELTGKKQTKGPAVNAKSALKLEHLQRLAVWAGGE 66

Query: 62  ASIPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNTKRRRRQ 121
           AS+PSL AFF   LA+A E+L V PD SLFTCQRCETILQPG NC++RIEKN +K+RR+ 
Sbjct: 67  ASVPSLGAFFAHTLASAQEALGVPPDPSLFTCQRCETILQPGLNCTVRIEKNRSKKRRKS 126

Query: 122 KKCSNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFER--RVKPV----------- 181
           KK ++ +QNNV Y CH CS RN+KRGTP GHMKV+     +   ++KP            
Sbjct: 127 KKPTSFSQNNVVYTCHFCSHRNLKRGTPHGHMKVICPTKTKTTSKLKPAKSISQKSVSSK 186

Query: 182 -------DVKDGQECETSAVEKPTEILT------IDAPKIPDASAIPPPTGDITA--LDN 241
                  +V+   E   S + +  EI +      I A +I  +       G+ TA  ++N
Sbjct: 187 KSIVAEDEVRKANEIAASEIIQANEIASSEITREIQANEIASSEIAREIQGNETASEIEN 246

Query: 242 PAIQLRTKAILNINSPATPSTLSVTTLSKSQKQEMTTL--SEKHIGHEIRTDKEKKT--- 301
                     + +N      T S     + Q+ E  +L  + ++   E   D+++ T   
Sbjct: 247 ETASSEIAREIQVNE-----TASSEIAREFQENETASLEIARENCIVETWADEDEVTIVN 306

Query: 302 --------GAVPTVDTPATPSTSTGVT-LLDSKKRKRNKPSSKNQTDPGSCSAPTADGDR 357
                   G +P VD+P TP   TG T LL  K+RKRNK  SK   +P +   PT D + 
Sbjct: 307 EMASSAMAGEIPMVDSPETPKVRTGPTLLLGGKRRKRNKSVSKKPAEPENSPNPT-DAEN 366

[Close]

BLAST of Cp4.1LG14g02140 vs. TrEMBL
Match: A0A068UGM5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024934001 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.2e-41
Identity = 140/379 (36.94%), Postives = 198/379 (52.24%), Query Frame = 1


Query: 1   MAKRKGNTKKGASNPTSGPQ----DSITIRQEITGKFKPKVSNNVKTYLNHLENLATWAS 60
           M K+K ++   A+  +S P      S T+R+E +GK +  V+      L+HL+NLA WA+
Sbjct: 1   MGKKKNSSTAAAAAISSQPHLQQAPSGTMREESSGKKQSSVNPKSMLKLDHLKNLAIWAT 60

Query: 61  GKASIPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNTKRRR 120
            +AS+ SL AFFG RLA  AE+L V PD SLF+CQRCE+ILQPG NC++RIEK     +R
Sbjct: 61  AEASVSSLGAFFGHRLAATAEALGVPPDPSLFSCQRCESILQPGYNCTVRIEKIKPNPKR 120

Query: 121 RQKKCSNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGQ----E 180
           R+KK S S +N+V Y CH CS RN+KRGTPKG+MK L  +  +   K    K       +
Sbjct: 121 RRKKRSLSIENSVVYSCHFCSHRNLKRGTPKGYMKELCPSKPKVSSKSDPTKSSHPKFAK 180

Query: 181 CETSAVEKPTEILTIDA-------PKIPDASAIPPPTGDITALDNPAIQLRT----KAIL 240
            +     K   +  +D         K P   +   P+  +  L +   + RT    K I+
Sbjct: 181 AKVITASKNDPMSKVDGIASQKIINKDPVNDSSTTPSAKVETLLDTRKRKRTRSGSKKIV 240

Query: 241 NINSPATPSTLSVTTL--SKSQKQEMTTLSEKHIGHEIRTDKEKKTGAVPTVDTPATPST 300
              S + P      ++  SK +++  TT     +        +K     P  D+  TPS 
Sbjct: 241 ESESSSVPVDAKKASIPSSKRKRKSWTTSKNDPMSKVDGIASQKIINKDPVNDSSTTPSA 300

Query: 301 STGVTLLDSKKRKRNKPSSKNQTDPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVART 359
               TLLD++KRKR +  SK   +  S S P      S  +SK  RKRKSWTSLK++A  
Sbjct: 301 KVE-TLLDTRKRKRTRSGSKKIVESESSSVPVDAKKASIPSSK--RKRKSWTSLKDIAEC 360

[Close]

BLAST of Cp4.1LG14g02140 vs. TrEMBL
Match: M1A5Y5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG403005999 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.1e-40
Identity = 144/375 (38.40%), Postives = 198/375 (52.80%), Query Frame = 1


Query: 9   KKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLN--HLENLATWASGKASIPSLAA 68
           K    N       SIT+R+E +G  K +   N K+ L   H++++ATWASG+ SIPSL A
Sbjct: 4   KSSRKNGVGKALGSITLREE-SGVKKKQTHVNAKSMLKLEHIKDIATWASGEGSIPSLGA 63

Query: 69  FFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNTKRRRRQKKCSNSTQ 128
           FFGQRLA AAESL V PD SLFTCQRCE+ILQ G NC+ RIEKN  K R++ K      +
Sbjct: 64  FFGQRLAVAAESLGVPPDPSLFTCQRCESILQAGYNCTTRIEKNKRKARKKLKTSGIPPK 123

Query: 129 NNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGQECETSAVEKPTE--- 188
           N+V Y CH CS RN+KRGTP+G+MK L  A    + K + V   +     A   PTE   
Sbjct: 124 NSVVYECHFCSHRNLKRGTPRGYMKSLNPA----KPKTLTVDPAKSATRKAKVDPTESAM 183

Query: 189 ---------ILTIDAPKIPDASAIPPPT----GDITALDNPAIQLRTKAILNINSPATPS 248
                    + +ID  K+    +I   +      + + D  ++   TK+    +     S
Sbjct: 184 QRSEHLGTLVASIDKAKVDPTESIMHKSEHLDTSVASTDKASVD-PTKSAKQKSEHLDTS 243

Query: 249 TLSV------TTLSKSQKQEMTTLSEKHIGHEIRTDKEKKTGAVPTVDTPATP-STSTGV 308
             S+      TT S +QK E     +   G         +      +  PATP ST T  
Sbjct: 244 VASIDKARVDTTESATQKSEQ---FDALGGSTTDVIVSSELVGEDAMAGPATPLSTVTVT 303

Query: 309 TLLDSKKRKRNKPSSKNQTDPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQS 359
           +LLDSKKRKRN+  SK + +P   S+ T D +++  TS + RK+ SWTSLKE+A +  QS
Sbjct: 304 SLLDSKKRKRNRTGSKKK-EPQDGSSMT-DAEKTVSTSSK-RKKTSWTSLKEIAES--QS 363

[Close]

BLAST of Cp4.1LG14g02140 vs. TrEMBL
Match: B9GWI5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s12730g PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 9.0e-40
Identity = 123/301 (40.86%), Postives = 168/301 (55.81%), Query Frame = 1


Query: 45  LNHLENLATWASGKASIPSLAAFFGQRLATAAESLAVAPDAS-LFTCQRCETILQPGSNC 104
           L HL+NLA+WA+ +ASIPSLAAFFG++ A++AE+L V  D S LF CQRC T L+PG NC
Sbjct: 42  LEHLQNLASWATEEASIPSLAAFFGRQFASSAEALGVPLDPSALFQCQRCGTFLRPGFNC 101

Query: 105 SIRIEKNNTKRRRRQKKCSNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVK 164
           + +IEKN +K RRR K+ S ST+NNV Y CHHC   N+KRGTPKGHMK +     + + K
Sbjct: 102 TTQIEKNQSKARRRHKRFSTSTKNNVVYKCHHCLHINLKRGTPKGHMKEICPPKPKPQAK 161

Query: 165 PVD--VKDGQECETSAVEKPTEILTIDAPKIPDASAIPPPTGDITALDNPAIQLRTKAIL 224
           P    ++     E     K  EI+ ID P +P   AI   T       NP  +++T  I 
Sbjct: 162 PTKSVLQKSANLEKGTSSK-GEIVKIDGPALP---AISLGTSMTNNPANPFPRIKTDEIY 221

Query: 225 NINSPATPSTLSVTTLSKSQKQEMTTLSEKHIGHEIRTDKEKKTGAVPTVDTPATPSTST 284
            I   A P+    T+++ S       +    I     T     + +     +PATP  S 
Sbjct: 222 KIAETALPAISVDTSITDSPATPFPRVKTDEIIKIDETALPAISMSASITSSPATPLPSG 281

Query: 285 GVTLLDSKKRKRNKPSSKNQTDPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNE 343
             +LLD+ K+KRN+ + K +   G  +A   D + +  TS + RKRKSWTSLKE+     
Sbjct: 282 RFSLLDATKKKRNRSAKKPEQSEGDSAA--MDAENTVSTSSK-RKRKSWTSLKEIVEKRA 335

[Close]

BLAST of Cp4.1LG14g02140 vs. TAIR10
Match: AT5G41270.1 (AT5G41270.1 RNAse P, Rpr2/Rpp21 subunit (InterPro:IPR007175))

HSP 1 Score: 115.9 bits (289), Expect = 5.0e-26
Identity = 66/123 (53.66%), Postives = 83/123 (67.48%), Query Frame = 1


Query: 40  NVKTYLNH--LENLATWA-SGKASIPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETI 99
           N+K+ L H  L+NLA W+ +G   IPSLA+  G+RLA   ES  +  D  L +CQRCETI
Sbjct: 19  NLKSVLRHEHLKNLALWSSTGDTPIPSLASLLGRRLAADTESTGITTDPDLVSCQRCETI 78

Query: 100 LQPGSNCSIRIEK---NNTKRRRRQKKCSN--STQNNVAYYCHHCSCRNIKRGTPKGHMK 155
           L+PG NC++RIEK   N  K+R R KK +N    QNNV Y+C+ CS RN+KRGT KG MK
Sbjct: 79  LKPGFNCNVRIEKVSANVKKKRNRCKKSNNICFPQNNVVYHCNFCSHRNLKRGTAKGQMK 138

[Close]

BLAST of Cp4.1LG14g02140 vs. NCBI nr
Match: gi|659102242|ref|XP_008452026.1| (PREDICTED: uncharacterized protein LOC103493157 [Cucumis melo])

HSP 1 Score: 406.4 bits (1043), Expect = 5.3e-110
Identity = 233/378 (61.64%), Postives = 270/378 (71.43%), Query Frame = 1


Query: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60
           MA++KGNTK+G+SNPTSGPQ+SIT+RQE TGK KPKVSNN K YLNHLENLATWASG+ S
Sbjct: 1   MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60

Query: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNTKRRRRQKK 120
           +PSLAAFFGQRLA AAESLAVAPD SLF C RCET+LQPGSNC IRIEKNN K+RRR KK
Sbjct: 61  LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRRRHKK 120

Query: 121 CSNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGQECETS--AV 180
            SN TQN VAYYCH+CSCRNIKRGTPKGHMKVLY      +VK V VKDG+ECE     V
Sbjct: 121 ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILTV 180

Query: 181 EKPT-------EILTIDAPKIP-----------DASAIPPPTGDITALDNPAIQLRTKAI 240
           + PT       + LTID P IP           D +A+ PPT DI+  D PAI       
Sbjct: 181 DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAV-PPTEDISVDDGPAISSPR--- 240

Query: 241 LNINSPATPSTLSVTTLSKSQKQEMTTLSEKHIGHEIRTDKEKKTGAVPTVDTPATPSTS 300
               +PA PST SVT++S+SQ ++                       +PT+D PATP T 
Sbjct: 241 ---TTPAIPSTSSVTSMSRSQVRD-----------------------IPTLDAPATPLTL 300

Query: 301 TGVTLLDSKKRKRNKPSSKNQTDPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTN 359
           T +TLLDSK+RKR KPSSKN+T+P SCSAPT+ G++SE TSKR R RKSWTSLKE+A+  
Sbjct: 301 TAMTLLDSKRRKRKKPSSKNRTEPESCSAPTSHGEKSEDTSKRKRNRKSWTSLKEIAQRE 347

[Close]

BLAST of Cp4.1LG14g02140 vs. NCBI nr
Match: gi|449457658|ref|XP_004146565.1| (PREDICTED: uncharacterized protein LOC101220608 [Cucumis sativus])

HSP 1 Score: 397.9 bits (1021), Expect = 1.9e-107
Identity = 230/378 (60.85%), Postives = 264/378 (69.84%), Query Frame = 1


Query: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60
           MA++K NT +G+SNP  GPQ+SIT+RQE TGK KPKVSNN K YLNHLENLATWASG+ S
Sbjct: 1   MARKKSNTNRGSSNPGFGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60

Query: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNTKRRRRQKK 120
           +PSLAAFFGQRLA AAESLAV+PD SLF C RCETILQPGSNC+IRIEKN  K+RRR KK
Sbjct: 61  LPSLAAFFGQRLAAAAESLAVSPDPSLFLCARCETILQPGSNCNIRIEKNTAKKRRRHKK 120

Query: 121 CSNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGQECETSAVEK 180
            SN TQN VAYYCH+CSCRNIKRGTPKGHMKVLY      +VK V VKDG+ECE      
Sbjct: 121 GSNLTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKIFTM 180

Query: 181 PT---------EILTIDAPKIP-----------DASAIPPPTGDITALDNPAIQLRTKAI 240
            T         + LTID P IP           D SAI  PTGDI+ +D PAI       
Sbjct: 181 DTPKIPPLTTVDCLTIDTPAIPSLSTTRDDLTIDTSAI-SPTGDISVVDGPAISSPR--- 240

Query: 241 LNINSPATPSTLSVTTLSKSQKQEMTTLSEKHIGHEIRTDKEKKTGAVPTVDTPATPSTS 300
               +PA  STLSVT++S+SQ ++                       +PT+D PATP T 
Sbjct: 241 ---TTPAISSTLSVTSISRSQVRD-----------------------IPTLDAPATPLTL 300

Query: 301 TGVTLLDSKKRKRNKPSSKNQTDPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTN 359
           TG+TLLDSK+RKR KPSSKNQT+P SCS PT+ G+ SEGTSKR R RKSWTSLKE+A+  
Sbjct: 301 TGMTLLDSKRRKRKKPSSKNQTEPESCSGPTSHGETSEGTSKRKRNRKSWTSLKEIAQRE 347

[Close]

BLAST of Cp4.1LG14g02140 vs. NCBI nr
Match: gi|645266916|ref|XP_008238833.1| (PREDICTED: uncharacterized protein LOC103337456 [Prunus mume])

HSP 1 Score: 208.0 bits (528), Expect = 2.8e-50
Identity = 151/386 (39.12%), Postives = 214/386 (55.44%), Query Frame = 1


Query: 2   AKRKGNTKKGASNPTSGPQDSITIRQEITGKFK---PKVSNNVKTYLNHLENLATWASGK 61
           AKR GNT  G++N       +I++R+E+TGK +   P V+      L HL+ LA WA G+
Sbjct: 7   AKRTGNTAYGSNN-------TISLREELTGKKQTKGPAVNAKSALKLEHLQRLAVWAGGE 66

Query: 62  ASIPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNTKRRRRQ 121
            S+PSL AFF   LA+A E+L V PD SLFTCQRCETILQPG NC++RIEKN +K+RR+ 
Sbjct: 67  TSVPSLGAFFAHTLASAQEALGVPPDPSLFTCQRCETILQPGLNCTVRIEKNRSKKRRKS 126

Query: 122 KKCSNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGQECETSA- 181
           KK ++ +QNNV Y CH CS RN+KRGTP GHMKV+     +  +K    K   +   S+ 
Sbjct: 127 KKPTSFSQNNVVYTCHFCSHRNLKRGTPHGHMKVICPTKTKTTLKLKPAKSISQKFVSSK 186

Query: 182 --------VEKPTEILTIDAPKIPDASAIPPPTGDITALDNPAIQLRTKAILNINSPATP 241
                   V K  EI   +  K+ + +     + +IT          ++ +  I    T 
Sbjct: 187 KSIVAEDEVRKANEIAASEIIKVNEIA-----SSEITREIQANEIASSEIVREIQGNETA 246

Query: 242 STLSVTTLSKS-----QKQEMTTL--SEKHIGHEIRTDKEKKT-----------GAVPTV 301
           S +   T S       Q++E  +L  + ++   E R D+++ T           G +PTV
Sbjct: 247 SEIENETASSEIAREIQEKETASLEIARENRIMETRADEDEVTIVNEMASSAIGGEIPTV 306

Query: 302 DTPATPSTSTGVT-LLDSKKRKRNKPSSKNQTDPGSCSAPTADGDRSEGTSKRNRKRKSW 357
           D+P TP   TG T LL  K+RKRNK  SK   +P +   PT D + + G+    R+RK W
Sbjct: 307 DSPETPKVRTGPTLLLGGKRRKRNKSVSKKPAEPENSPNPT-DAENT-GSMSNKRRRKKW 366

[Close]

BLAST of Cp4.1LG14g02140 vs. NCBI nr
Match: gi|595858677|ref|XP_007210793.1| (hypothetical protein PRUPE_ppa018166mg [Prunus persica])

HSP 1 Score: 202.6 bits (514), Expect = 1.2e-48
Identity = 152/400 (38.00%), Postives = 216/400 (54.00%), Query Frame = 1


Query: 2   AKRKGNTKKGASNPTSGPQDSITIRQEITGKFK---PKVSNNVKTYLNHLENLATWASGK 61
           AKR GNT  G++N       +I++R+E+TGK +   P V+      L HL+ LA WA G+
Sbjct: 7   AKRTGNTAYGSNN-------TISLREELTGKKQTKGPAVNAKSALKLEHLQRLAVWAGGE 66

Query: 62  ASIPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNTKRRRRQ 121
           AS+PSL AFF   LA+A E+L V PD SLFTCQRCETILQPG NC++RIEKN +K+RR+ 
Sbjct: 67  ASVPSLGAFFAHTLASAQEALGVPPDPSLFTCQRCETILQPGLNCTVRIEKNRSKKRRKS 126

Query: 122 KKCSNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFER--RVKPV----------- 181
           KK ++ +QNNV Y CH CS RN+KRGTP GHMKV+     +   ++KP            
Sbjct: 127 KKPTSFSQNNVVYTCHFCSHRNLKRGTPHGHMKVICPTKTKTTSKLKPAKSISQKSVSSK 186

Query: 182 -------DVKDGQECETSAVEKPTEILT------IDAPKIPDASAIPPPTGDITA--LDN 241
                  +V+   E   S + +  EI +      I A +I  +       G+ TA  ++N
Sbjct: 187 KSIVAEDEVRKANEIAASEIIQANEIASSEITREIQANEIASSEIAREIQGNETASEIEN 246

Query: 242 PAIQLRTKAILNINSPATPSTLSVTTLSKSQKQEMTTL--SEKHIGHEIRTDKEKKT--- 301
                     + +N      T S     + Q+ E  +L  + ++   E   D+++ T   
Sbjct: 247 ETASSEIAREIQVNE-----TASSEIAREFQENETASLEIARENCIVETWADEDEVTIVN 306

Query: 302 --------GAVPTVDTPATPSTSTGVT-LLDSKKRKRNKPSSKNQTDPGSCSAPTADGDR 357
                   G +P VD+P TP   TG T LL  K+RKRNK  SK   +P +   PT D + 
Sbjct: 307 EMASSAMAGEIPMVDSPETPKVRTGPTLLLGGKRRKRNKSVSKKPAEPENSPNPT-DAEN 366

[Close]

BLAST of Cp4.1LG14g02140 vs. NCBI nr
Match: gi|697095628|ref|XP_009612264.1| (PREDICTED: uncharacterized protein LOC104105616 [Nicotiana tomentosiformis])

HSP 1 Score: 198.0 bits (502), Expect = 2.9e-47
Identity = 145/357 (40.62%), Postives = 195/357 (54.62%), Query Frame = 1


Query: 5   KGNTKKGASNPTSGPQDSITIRQEITGKFKPK-VSNNVKTYLNHLENLATWASGKASIPS 64
           KG  KK     TSG   SIT+R E++GK K   V+      L H++NLATWASG+ASI S
Sbjct: 3   KGRAKKKGGGTTSG---SITLRDELSGKKKQSHVNAKSMLKLEHIKNLATWASGEASIHS 62

Query: 65  LAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNTKRRRRQKKCSN 124
           L AFFGQRLA +AESL V PD SLFTCQRCE+ILQ G NC++RIEK   K R R+KK   
Sbjct: 63  LGAFFGQRLAASAESLGVPPDPSLFTCQRCESILQVGYNCTVRIEKKKRKARNRRKKPGI 122

Query: 125 STQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFER-RVKPVDVKDGQECETSAVEKPT 184
             +N+V Y CH CS RN+KRGTP+G+MK LY A     RV P      +     + +  T
Sbjct: 123 PPKNSVVYECHFCSHRNLKRGTPRGYMKELYPAKITTSRVDPT-----KSATRKSEQLDT 182

Query: 185 EILTIDAPKIPDASAIPPPTGDITALDNPAIQLRTKAILNINSPATPSTLSVTTLSKSQK 244
            + +ID  ++    +    +  +  L+            NI+      T S T     QK
Sbjct: 183 VVSSIDKARVDRTESATQKSEQLDTLE-----------ANIDETRVDLTESAT-----QK 242

Query: 245 QEMTTLSEKHIGHEIRTDKEKKTGAVPTVDTPATP-STSTGVTLLDSKKRKRNKPSSKNQ 304
            E    S      +   D   +         PATP ST T  +LLDSK++KRN+  SK +
Sbjct: 243 SEQFDTSVDSTNRDNNADVSSEIVGDDPTTGPATPLSTVTVTSLLDSKRKKRNRTVSKKK 302

Query: 305 TDPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL 359
            +P   S+ T D +++  TS + RKRKSWTSLKE+A +  +    +  + +++PF L
Sbjct: 303 VEPQDGSSAT-DAEKTVSTSSK-RKRKSWTSLKEIAES--EGSNSRKFSNISVPFVL 331

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g02140 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG14g02140 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUP1_CUCSA	1.3e-107	60.85	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G048010 PE=4 SV=1	[more]
M5WDZ3_PRUPE	8.1e-49	38.00	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018166mg PE=4 SV=1	[more]
A0A068UGM5_COFCA	1.2e-41	36.94	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024934001 PE=4 SV=1	[more]
M1A5Y5_SOLTU	3.1e-40	38.40	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG403005999 PE=4 SV=1	[more]
B9GWI5_POPTR	9.0e-40	40.86	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s12730g PE=4 SV=1	[more]

BLAST of Cp4.1LG14g02140 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G41270.1	5.0e-26	53.66	RNAse P, Rpr2/Rpp21 subunit (InterPro:IPR007175)	[more]

BLAST of Cp4.1LG14g02140 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659102242\|ref\|XP_008452026.1\|	5.3e-110	61.64	PREDICTED: uncharacterized protein LOC103493157 [Cucumis melo]	[more]
gi\|449457658\|ref\|XP_004146565.1\|	1.9e-107	60.85	PREDICTED: uncharacterized protein LOC101220608 [Cucumis sativus]	[more]
gi\|645266916\|ref\|XP_008238833.1\|	2.8e-50	39.12	PREDICTED: uncharacterized protein LOC103337456 [Prunus mume]	[more]
gi\|595858677\|ref\|XP_007210793.1\|	1.2e-48	38.00	hypothetical protein PRUPE_ppa018166mg [Prunus persica]	[more]
gi\|697095628\|ref\|XP_009612264.1\|	2.9e-47	40.62	PREDICTED: uncharacterized protein LOC104105616 [Nicotiana tomentosiformis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007175	Rpr2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g02140.1	Cp4.1LG14g02140.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007175	RNAse P, Rpr2/Rpp21 subunit	PFAM	PF04032	Rpr2	coord: 45..136 score: 1.7
None	No IPR available	PANTHER	PTHR36072	FAMILY NOT NAMED	coord: 7..359 score: 4.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG14g02140	Cucsa.106820	Cucumber (Gy14) v1	cgycpeB0237
Cp4.1LG14g02140	CmaCh16G005930	Cucurbita maxima (Rimu)	cmacpeB344
Cp4.1LG14g02140	CmoCh16G006420	Cucurbita moschata (Rifu)	cmocpeB307
Cp4.1LG14g02140	Cla014634	Watermelon (97103) v1	cpewmB218
Cp4.1LG14g02140	Csa4G048010	Cucumber (Chinese Long) v2	cpecuB221
Cp4.1LG14g02140	MELO3C016352	Melon (DHL92) v3.5.1	cpemeB196
Cp4.1LG14g02140	ClCG07G008080	Watermelon (Charleston Gray)	cpewcgB210
Cp4.1LG14g02140	CSPI04G05800	Wild cucumber (PI 183967)	cpecpiB223
Cp4.1LG14g02140	Lsi07G008890	Bottle gourd (USVL1VR-Ls)	cpelsiB187
Cp4.1LG14g02140	MELO3C016352.2	Melon (DHL92) v3.6.1	cpemedB238
Cp4.1LG14g02140	CsaV3_4G005960	Cucumber (Chinese Long) v3	cpecucB0266
Cp4.1LG14g02140	Bhi01G001801	Wax gourd	cpewgoB0289
Cp4.1LG14g02140	CsGy4G005660	Cucumber (Gy14) v2	cgybcpeB487
Cp4.1LG14g02140	Carg22203	Silver-seed gourd	carcpeB0838

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG14g02140	Cucurbita pepo (Zucchini)	cpecpeB196
Cp4.1LG14g02140	Cucurbita pepo (Zucchini)	cpecpeB233
Cp4.1LG14g02140	Cucurbita maxima (Rimu)	cmacpeB714
Cp4.1LG14g02140	Cucurbita moschata (Rifu)	cmocpeB667
Cp4.1LG14g02140	Watermelon (Charleston Gray)	cpewcgB203
Cp4.1LG14g02140	Watermelon (97103) v1	cpewmB231
Cp4.1LG14g02140	Cucumber (Gy14) v2	cgybcpeB324
Cp4.1LG14g02140	Cucumber (Gy14) v2	cgybcpeB619
Cp4.1LG14g02140	Melon (DHL92) v3.6.1	cpemedB217
Cp4.1LG14g02140	Melon (DHL92) v3.6.1	cpemedB218
Cp4.1LG14g02140	Melon (DHL92) v3.6.1	cpemedB230
Cp4.1LG14g02140	Silver-seed gourd	carcpeB1301
Cp4.1LG14g02140	Cucumber (Chinese Long) v3	cpecucB0254
Cp4.1LG14g02140	Cucumber (Chinese Long) v3	cpecucB0277