Carg22203 (gene) Silver-seed gourd

NameCarg22203
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionRNAse P, Rpr2/Rpp21 subunit
LocationCucurbita_argyrosperma_scaffold_174 : 43473 .. 47076 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAAGAGGAAGGGAAATACGAAGAAAGGAGCGTCTAACCCGACATCCGGTCCGCAAGATTCGATCACTATTAGACAGGAAATCACTGGGAAATTCAAACCCAAAGTCTCTAACAATGTCAAAACTTATTTGAATCATTTGGAAAACCTAGCGACTTGGGCTAGTGGGAAAGCCTCTATTCCTTCATTGGCTGCTTTCTTTGGGCAGCGCCTCGCTACTGCAGCGGAGTCCTTGGCGGTCGCTCCCGACGCTTCTTTGTTTACCTGCCAGAGGTCCGTATGACTTCTGCCCTTTACATTCGTTTGGCTTTGCGCATCTAGATTTGTTGTTTTCGTAGTGTTTATACATGGGTAAGTCCATGATGATCGATTGTATTTGGGATGGTTTAAATTTTCTGATTAGTTCTAAATGGCACTAATCTGATGTAAACGACATTTGAATATCGAGATTTGACGCAAATTTTGTTTAACTGTAAATTATGATGTGGAAGGAATAGGGTAAGGTGCTTGGAATTATGGCTGTATTGTGAATGATTTTAGGGGTTCTGTTGTGCAATGTACCAGCAGTTTGTGGATACTTTGGCCCCTCTTGCTTGTTATCACATAGGTTTTCATATTTTATCCTGGAGTTTGTATTGTAGCAAGGTTGGGGGTGTAAGCTTGTGAATTGTACTATCTTAGTTGGGGATATCCCCTTTGGTGACAATCAGATAACCAAAGAGGCTTAAGTTTTGGGAACCCATGAAGGAAAAAGTCTTACTCAAGCTTCATAAATGGAGGTAGTTATCCAAAGGGGGAAGAAGCTTGCCTGTGTGTGTCGTAGTCCTAGTAAAATTGCCTACCTTTTTTATGTGCATCTCGTGATGCCGAGGAAAATGAGGAACTTTCTTTGGAATGGTTCTTTCGAGAGAAAGCGGAGCGATCTAGTGAATTGAAGGCAGTATCCTTACCCTTGTTAAATTAAAGGTTCAGAATTGGACACTTGAGACGAGGCGATGAAGCCCTTTTGGAAAACTGGGTTTGGTATTGCCAGGGGCAACCTGGCTTAATCAAGCACAAAATAGTGCATAGTATCTATGAGTTTGGGGAGGGATGCAAGAAGGAATGAGCCATGCACACACTGGAATATAATGACTAAGAGAAATCGTTCGAATGAAGAACTGAAGAGTTCAATGCTATTTTTGAGACTGCTTGAAAACAGGGTTATTGGTGCTGGAGTGGATGAAATAAGCTGGAATTTTGGTAGCTCTGGTGTTCTCATTCAAATCTCTAGCTTTGTCAGACAGAGAGTTCATGAGAGGTATAGAAATAGAGCTTTCAGAGGTAGTGTAAAAAAGAACATGCCACAAAAAGATCAAAACGTTAGAGTGAATAGCCTGCCTAAGTGGTCTTTTTTCTTTTTGTTTTTATTTTTTTAGGACGTTACAATTAAAACGTCCTATGGTGATCTTGAATCTGTATATGCTTATTATCCTAGGAAGAGTATAAAGGCACCATACACCTTTCTTCCATTTCGCGTTTGGCGATTGAATTTGGAACTCGTTAGTCATTGTTATAAAATTTTCGGATACTTCGGGGTTTTTCATTGATCTTTGAAAGCTTACATATCCCTTCTACAATGGGGTCCGTCTCTGAATGGAAAAACCAGGAAGATATGGCCAATGCAATCAAATCTGTTCTTTGGAGGCTGTGGATTGGGAAGAAAAAAGAAAGCATTTAACATCGAAGCTAAAGACGGGCTTGAAGTGCATGAGTTTGTTTAGTCTCATTGTGTGAGATCCCACATCGGTTGGAGAGGGAAACGAAGTATTCCTTATAAGAGTGTGAAAACCTCTCTCTAGCAGTCTCGTTTTAAAAACTTTGAGGGGAAGCCCAAAAGGGAAAGACCAAAGAGGACAATATTTGCTAGCGGTGGGCTTGGGCTGTTACAAATGTTATTAGAGCTAGATACTGGGAAGTGTGCCAGCGAGGACATTGGCCCCCAAGGGGGTGGACTGTGAGATCCCATATTGGTTGGAGAGGGAAATGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAAAAGACACGTTTTAAAAACCTTGAGGAGAAGCCCTAAAGGGAAAGACCAAAGAGGACAATATTTGCTAGCGGTGGGTTTGGGCGGTTACAAATGGTATCAGAACTAGACACCAAGTCGTGTGCCAGCGAGGGCGCTGACTCCCAAGGGGGGTAGATTGTGAGATCCCACATTGGTTGGCGAGGGGAACGAAATATTTCTTATAAGGGTGTGAAAACCTCTACCTAGCATACGTGTTTTAAAAACCTTGAAGGGAAGCCCGAAAGGGAAAGTCCAAAAAGGACAATATTTACTAGTAGTGGGCTTGGAATGTGTAATATTTCTTTAGACAGTGGGTTTAACAACTCTATTCCCCTTGTAGCTAATACTAATTGAGAGGTGGGTGGGTTTTTGTAGTAACTTCAACTAACACCTTAGCTATGATGACAGAATTCTCTTCTTTCTCCTATGATCTTCCATGGAACTCATAATCAAAAAATGTTTGCACGTATCTCATTAGACAAGCCTGAGCATTAAAATATGCTCATTGACGCTTATTGTTAAATTTTTACCGTTACTTCGAAAAAAGAAACCTACTAATGTTTTAATTCAATGAATGGAGCGGGCAATCGACTCAAACCATATAGCAGTTTTATCATGTCACATTTGAATGTTGTCTTGGCATCTTACTTGATTCTGCTTTGGCTACAAAGCTAGCCAATCTTACCTGTTCTATTATATTGCATTCAGGTGTGAAACAATTCTTCAACCTGGCTCTAACTGTTCTATACGAATAGAGAAGAATAACGCCAAGAGACGTCGGAGACAGAAGAAATGTTGTAATTCGACACAGAACAATGTGGCGTATTATTGCCACCACTGCTCGTGTAGGAACATAAAGAGAGGAACTCCCAAAGGCCATATGAAAGTGCTATACGATGCAGCGTTTGAAAGAAGGGTGAAGCCTGTGGATGTTAAGGATGGTAAAGAATGTGAGACATCTGCAGTGGAGAGGCCAACTGAGATTCTTACCATTGATGCTCCTAAAATTCCTGATGCTTCTGCAATTCCTCCTCCAACTGGGGACATCACTGCTCTTGATAACCCTGCAATTCAGCTTCCAAAAACGGAGGGCATTCTTAATATTAATTCTCCAGCAACTCCGTCCGCCGTGAGCATAACGACACTGTCGAAACCGCAGAAATGGAAAATGACGACGACATTATCAGAGAAACATATTGGACACGAGACTAGAACAGACAGGGAGAAGAAAACTGGGGCTGTTCCTACTGTTGATACACCCGCCACCCCTTCCACCTCGACCGGAGTGACTCTGTTGGATTCGAAGAAGAGAAAGAGGAACAAGCCATCGTCTAAGAATCAAACCGAACCCGGAAGTTGCTCTGCTCCAACAGCAGATGGGGATAGAAGTGAAGGCACATCCAAAAGGAATCGTAAAAGAAAATCATGGACAAGTTTGAAGGAAGTTGCTCGGACGAATGAACAGAGTGGTAAACAAAAAAACATGGCTGAACTGGCAATTCCATTCTCCTTGTATTAA

mRNA sequence

ATGGCGAAGAGGAAGGGAAATACGAAGAAAGGAGCGTCTAACCCGACATCCGGTCCGCAAGATTCGATCACTATTAGACAGGAAATCACTGGGAAATTCAAACCCAAAGTCTCTAACAATGTCAAAACTTATTTGAATCATTTGGAAAACCTAGCGACTTGGGCTAGTGGGAAAGCCTCTATTCCTTCATTGGCTGCTTTCTTTGGGCAGCGCCTCGCTACTGCAGCGGAGTCCTTGGCGGTCGCTCCCGACGCTTCTTTGTTTACCTGCCAGAGGTGTGAAACAATTCTTCAACCTGGCTCTAACTGTTCTATACGAATAGAGAAGAATAACGCCAAGAGACGTCGGAGACAGAAGAAATGTTGTAATTCGACACAGAACAATGTGGCGTATTATTGCCACCACTGCTCGTGTAGGAACATAAAGAGAGGAACTCCCAAAGGCCATATGAAAGTGCTATACGATGCAGCGTTTGAAAGAAGGGTGAAGCCTGTGGATGTTAAGGATGGTAAAGAATGTGAGACATCTGCAGTGGAGAGGCCAACTGAGATTCTTACCATTGATGCTCCTAAAATTCCTGATGCTTCTGCAATTCCTCCTCCAACTGGGGACATCACTGCTCTTGATAACCCTGCAATTCAGCTTCCAAAAACGGAGGGCATTCTTAATATTAATTCTCCAGCAACTCCGTCCGCCGTGAGCATAACGACACTGTCGAAACCGCAGAAATGGAAAATGACGACGACATTATCAGAGAAACATATTGGACACGAGACTAGAACAGACAGGGAGAAGAAAACTGGGGCTGTTCCTACTGTTGATACACCCGCCACCCCTTCCACCTCGACCGGAGTGACTCTGTTGGATTCGAAGAAGAGAAAGAGGAACAAGCCATCGTCTAAGAATCAAACCGAACCCGGAAGTTGCTCTGCTCCAACAGCAGATGGGGATAGAAGTGAAGGCACATCCAAAAGGAATCGTAAAAGAAAATCATGGACAAGTTTGAAGGAAGTTGCTCGGACGAATGAACAGAGTGGTAAACAAAAAAACATGGCTGAACTGGCAATTCCATTCTCCTTGTATTAA

Coding sequence (CDS)

ATGGCGAAGAGGAAGGGAAATACGAAGAAAGGAGCGTCTAACCCGACATCCGGTCCGCAAGATTCGATCACTATTAGACAGGAAATCACTGGGAAATTCAAACCCAAAGTCTCTAACAATGTCAAAACTTATTTGAATCATTTGGAAAACCTAGCGACTTGGGCTAGTGGGAAAGCCTCTATTCCTTCATTGGCTGCTTTCTTTGGGCAGCGCCTCGCTACTGCAGCGGAGTCCTTGGCGGTCGCTCCCGACGCTTCTTTGTTTACCTGCCAGAGGTGTGAAACAATTCTTCAACCTGGCTCTAACTGTTCTATACGAATAGAGAAGAATAACGCCAAGAGACGTCGGAGACAGAAGAAATGTTGTAATTCGACACAGAACAATGTGGCGTATTATTGCCACCACTGCTCGTGTAGGAACATAAAGAGAGGAACTCCCAAAGGCCATATGAAAGTGCTATACGATGCAGCGTTTGAAAGAAGGGTGAAGCCTGTGGATGTTAAGGATGGTAAAGAATGTGAGACATCTGCAGTGGAGAGGCCAACTGAGATTCTTACCATTGATGCTCCTAAAATTCCTGATGCTTCTGCAATTCCTCCTCCAACTGGGGACATCACTGCTCTTGATAACCCTGCAATTCAGCTTCCAAAAACGGAGGGCATTCTTAATATTAATTCTCCAGCAACTCCGTCCGCCGTGAGCATAACGACACTGTCGAAACCGCAGAAATGGAAAATGACGACGACATTATCAGAGAAACATATTGGACACGAGACTAGAACAGACAGGGAGAAGAAAACTGGGGCTGTTCCTACTGTTGATACACCCGCCACCCCTTCCACCTCGACCGGAGTGACTCTGTTGGATTCGAAGAAGAGAAAGAGGAACAAGCCATCGTCTAAGAATCAAACCGAACCCGGAAGTTGCTCTGCTCCAACAGCAGATGGGGATAGAAGTGAAGGCACATCCAAAAGGAATCGTAAAAGAAAATCATGGACAAGTTTGAAGGAAGTTGCTCGGACGAATGAACAGAGTGGTAAACAAAAAAACATGGCTGAACTGGCAATTCCATTCTCCTTGTATTAA

Protein sequence

MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKASIPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNAKRRRRQKKCCNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVERPTEILTIDAPKIPDASAIPPPTGDITALDNPAIQLPKTEGILNINSPATPSAVSITTLSKPQKWKMTTTLSEKHIGHETRTDREKKTGAVPTVDTPATPSTSTGVTLLDSKKRKRNKPSSKNQTEPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSLY
BLAST of Carg22203 vs. NCBI nr
Match: XP_022931505.1 (uncharacterized protein LOC111437660 [Cucurbita moschata])

HSP 1 Score: 616.7 bits (1589), Expect = 5.0e-173
Identity = 346/361 (95.84%), Postives = 349/361 (96.68%), Query Frame = 0

Query: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60
           MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS
Sbjct: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60

Query: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKXXXXXXXXXXX 120
           IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKXXXXXXXXXXX
Sbjct: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVER 180
           XXXXXXXXXXXXXHHCSCRNIKRGTPKGHMKVLYDAAFERRVKP+DVKDGKECETSAVER
Sbjct: 121 XXXXXXXXXXXXXHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPLDVKDGKECETSAVER 180

Query: 181 PTEILTIDAPKIPDASAIPPPTGDITALDNPAIQLPKTEGILNINSPATPSAVSITTLSK 240
           PTEILTIDAPKIPDASAIPPPTGDITALDNPAIQLP+TEGILNINSPA PS VSITTLSK
Sbjct: 181 PTEILTIDAPKIPDASAIPPPTGDITALDNPAIQLPETEGILNINSPAAPSTVSITTLSK 240

Query: 241 PQKWKMTTTLSEKHIGHETRTDREKKTGAVPTVDXXXXXXXXXGVTLLDSKKRKRNKPSS 300
           PQKWKMTTTLSEKHIGHETRTD+EKKTGAVPTVD         GVTLLDSKKRKRNKPSS
Sbjct: 241 PQKWKMTTTLSEKHIGHETRTDKEKKTGAVPTVDTPATPSTSTGVTLLDSKKRKRNKPSS 300

Query: 301 KNQTEPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL 360
           KNQTE GSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL
Sbjct: 301 KNQTELGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL 360

Query: 361 Y 362
           Y
Sbjct: 361 Y 361

BLAST of Carg22203 vs. NCBI nr
Match: XP_023553160.1 (uncharacterized protein LOC111810649 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 527.3 bits (1357), Expect = 4.0e-146
Identity = 317/361 (87.81%), Postives = 326/361 (90.30%), Query Frame = 0

Query: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60
           MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS
Sbjct: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60

Query: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKXXXXXXXXXXX 120
           IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKXXXXXXXXXXX
Sbjct: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVER 180
           XXXXXXXXXXXX HHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDG+ECETSAVE+
Sbjct: 121 XXXXXXXXXXXXCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGQECETSAVEK 180

Query: 181 PTEILTIDAPKIPDASAIPPPTGDITALDNPAIQLPKTEGILNINSPATPSAVSITTLSK 240
           PTEILTIDAPKIPDASAIPPPTGDITALDNPAIQL +T+ ILNINSPATPS +S+TTLSK
Sbjct: 181 PTEILTIDAPKIPDASAIPPPTGDITALDNPAIQL-RTKAILNINSPATPSTLSVTTLSK 240

Query: 241 PQKWKMTTTLSEKHIGHETRTDREKKTGAVPTVDXXXXXXXXXGVTLLDSKKRKRNKPSS 300
            QK +M TTLSEKHIGHE RTD+EK         XXXXXXXXX                 
Sbjct: 241 SQKQEM-TTLSEKHIGHEIRTDKEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 KNQTEPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL 360
            NQT+PGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL
Sbjct: 301 XNQTDPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL 359

Query: 361 Y 362
           Y
Sbjct: 361 Y 359

BLAST of Carg22203 vs. NCBI nr
Match: XP_022984531.1 (uncharacterized protein LOC111482797 [Cucurbita maxima])

HSP 1 Score: 520.8 bits (1340), Expect = 3.8e-144
Identity = 317/361 (87.81%), Postives = 323/361 (89.47%), Query Frame = 0

Query: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60
           MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS
Sbjct: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60

Query: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKXXXXXXXXXXX 120
           IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEK XXXXXXXXXX
Sbjct: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVER 180
           XXXXXXXXXXXX HHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVER
Sbjct: 121 XXXXXXXXXXXXCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVER 180

Query: 181 PTEILTIDAPKIPDASAIPPPTGDITALDNPAIQLPKTEGILNINSPATPSAVSITTLSK 240
           PTEILTIDAPKIPDASAI PPTGDITALDNPAIQL +T+GILNINSPATPS +S+TTL K
Sbjct: 181 PTEILTIDAPKIPDASAI-PPTGDITALDNPAIQL-QTKGILNINSPATPSTLSVTTLLK 240

Query: 241 PQKWKMTTTLSEKHIGHETRTDREKKTGAVPTVDXXXXXXXXXGVTLLDSKKRKRNKPSS 300
            QK +M TTLSEKHIGH+ RTD EKK        XXXXXXXXX                 
Sbjct: 241 SQKREM-TTLSEKHIGHDIRTDEEKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 KNQTEPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL 360
            NQTEP SCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL
Sbjct: 301 XNQTEPRSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL 358

Query: 361 Y 362
           Y
Sbjct: 361 Y 358

BLAST of Carg22203 vs. NCBI nr
Match: XP_008452026.1 (PREDICTED: uncharacterized protein LOC103493157 [Cucumis melo])

HSP 1 Score: 350.9 bits (899), Expect = 5.2e-93
Identity = 207/387 (53.49%), Postives = 241/387 (62.27%), Query Frame = 0

Query: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60
           MA++KGNTK+G+SNPTSGPQ+SIT+RQE TGK KPKVSNN K YLNHLENLATWASG+ S
Sbjct: 1   MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60

Query: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKXXXXXXXXXXX 120
           +PSLAAFFGQRLA AAESLAVAPD SLF C RCET+LQPGSNC IRIEK           
Sbjct: 61  LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRRRHKK 120

Query: 121 XXXXXXXXXXXXXHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVER 180
                        H+CSCRNIKRGTPKGHMKVLY      +VK V VKDGKECE      
Sbjct: 121 ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECE------ 180

Query: 181 PTEILTIDAPKIP---------------------------DASAIPPPTGDITALDNPAI 240
             +ILT+DAP  P                           D +A+ PPT DI+  D PAI
Sbjct: 181 -NKILTVDAPTTPPLTTVDCLXXXXXXXXXXXXTRDDVAVDTTAV-PPTEDISVDDGPAI 240

Query: 241 QLPKTEGILNINSPATPSAVSITTLSKPQKWKMTTTLSEKHIGHETRTDREKKTGAVPTV 300
             P+T       +PA PS  S+T++S+ Q                           +PT+
Sbjct: 241 SSPRT-------TPAIPSTSSVTSMSRSQ------------------------VRDIPTL 300

Query: 301 DXXXXXXXXXGVTLLDSKKRKRNKPSSKNQTEPGSCSAPTADGDRSEGTSKRNRKRKSWT 360
           D          +TLLDSK+RKR KPSSKN+TEP SCSAPT+ G++SE TSKR R RKSWT
Sbjct: 301 DAPATPLTLTAMTLLDSKRRKRKKPSSKNRTEPESCSAPTSHGEKSEDTSKRKRNRKSWT 347

BLAST of Carg22203 vs. NCBI nr
Match: XP_004146565.1 (PREDICTED: uncharacterized protein LOC101220608 [Cucumis sativus] >KGN53340.1 hypothetical protein Csa_4G048010 [Cucumis sativus])

HSP 1 Score: 295.0 bits (754), Expect = 3.4e-76
Identity = 185/387 (47.80%), Postives = 215/387 (55.56%), Query Frame = 0

Query: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60
           MA++K NT +G+SNP  GPQ+SIT+RQE TGK KPKVSNN K YLNHLENLATWASG+ S
Sbjct: 1   MARKKSNTNRGSSNPGFGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60

Query: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKXXXXXXXXXXX 120
           +PSLAAFFGQRLA AAESLAV+PD SLF C RCETILQPGSNC+IRIEK           
Sbjct: 61  LPSLAAFFGQRLAAAAESLAVSPDPSLFLCARCETILQPGSNCNIRIEKNTAKKRRRHKK 120

Query: 121 XXXXXXXXXXXXXHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVER 180
                        H+CSCRNIKRGTPKGHMKVLY      +VK V VKDGKECE      
Sbjct: 121 GSNLTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECE------ 180

Query: 181 PTEILTIDAPKIP---------------------------DASAIPPPTGDITALDNPAI 240
             +I T+D PKIP                           D SAI  PTGDI+ +D PAI
Sbjct: 181 -NKIFTMDTPKIPPLTTVDCLXXXXXXXXXXXXXRDDLTIDTSAI-SPTGDISVVDGPAI 240

Query: 241 QLPKTEGILNINSPATPSAVSITTLSKPQKWKMTTTLSEKHIGHETRTDREKKTGAVPTV 300
             P+T       +PA  S +S+T++S+ Q                           +PT+
Sbjct: 241 SSPRT-------TPAISSTLSVTSISRSQ------------------------VRDIPTL 300

Query: 301 DXXXXXXXXXGVTLLDSKKRKRNKPSSKNQTEPGSCSAPTADGDRSEGTSKRNRKRKSWT 360
           D         G+  LD                  SCS PT        TSKR R RKSWT
Sbjct: 301 DAPATPLTLTGMXXLDXXXXXXXXXXXXXXXXXXSCSGPTXXXXXXXXTSKRKRNRKSWT 347

BLAST of Carg22203 vs. TAIR10
Match: AT5G41270.1 (RNAse P, Rpr2/Rpp21 subunit (InterPro:IPR007175))

HSP 1 Score: 89.7 bits (221), Expect = 3.9e-18
Identity = 114/329 (34.65%), Postives = 147/329 (44.68%), Query Frame = 0

Query: 40  NVKTYL--NHLENLATWAS-GKASIPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETI 99
           N+K+ L   HL+NLA W+S G   IPSLA+  G+RLA   ES  +  D  L +CQRCETI
Sbjct: 19  NLKSVLRHEHLKNLALWSSTGDTPIPSLASLLGRRLAADTESTGITTDPDLVSCQRCETI 78

Query: 100 LQPGSNCSIRIEK-----XXXXXXXXXXXXXXXXXXXXXXXXHHCSCRNIKRGTPKGHMK 159
           L+PG NC++RIEK     XXXXXXXXXXXXXXXXXXXXXXX + CS RN+KRGT KG MK
Sbjct: 79  LKPGFNCNVRIEKVSANXXXXXXXXXXXXXXXXXXXXXXXXCNFCSHRNLKRGTAKGQMK 138

Query: 160 VLYDAAFERRVKPVDVKDGKECETSAVERPTEILTIDAPKIPDASAIPPPTGDITALDNP 219
            LY        KP   +  +                  PKI     +             
Sbjct: 139 ELYP------FKPKTARSSR------------------PKIKKEMTM------------- 198

Query: 220 AIQLPKTEGILNINSPATPSAVSITTLSKPQKWKMTTTLSEKHIGHETRTDREKKTGAVP 279
                             P  +    LS P++  +   + EK +G   +           
Sbjct: 199 ------------------PQEIQSNMLSSPER-SVKDQVEEKSVGDTPKP---------- 258

Query: 280 TVDXXXXXXXXXGVTLLDSKKRKRNKPSSKNQTEPGSCSAPTADGDRSEGTSKRNRKRKS 339
                        + L   + R+  KP SK  +EP S    T  G      S + +++  
Sbjct: 259 -------------MMLTLERDRRIRKPKSKKPSEPQSVPEKTVGG------SNKRKRKSP 258

Query: 340 WTSLKEVARTNEQSGKQKNMAELAIPFSL 361
           WTS+KE+A TN    K        IPF L
Sbjct: 319 WTSMKEIAETN----KSSKAGNFKIPFLL 258

BLAST of Carg22203 vs. TrEMBL
Match: tr|A0A1S3BU13|A0A1S3BU13_CUCME (uncharacterized protein LOC103493157 OS=Cucumis melo OX=3656 GN=LOC103493157 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 3.4e-93
Identity = 207/387 (53.49%), Postives = 241/387 (62.27%), Query Frame = 0

Query: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60
           MA++KGNTK+G+SNPTSGPQ+SIT+RQE TGK KPKVSNN K YLNHLENLATWASG+ S
Sbjct: 1   MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60

Query: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKXXXXXXXXXXX 120
           +PSLAAFFGQRLA AAESLAVAPD SLF C RCET+LQPGSNC IRIEK           
Sbjct: 61  LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRRRHKK 120

Query: 121 XXXXXXXXXXXXXHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVER 180
                        H+CSCRNIKRGTPKGHMKVLY      +VK V VKDGKECE      
Sbjct: 121 ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECE------ 180

Query: 181 PTEILTIDAPKIP---------------------------DASAIPPPTGDITALDNPAI 240
             +ILT+DAP  P                           D +A+ PPT DI+  D PAI
Sbjct: 181 -NKILTVDAPTTPPLTTVDCLXXXXXXXXXXXXTRDDVAVDTTAV-PPTEDISVDDGPAI 240

Query: 241 QLPKTEGILNINSPATPSAVSITTLSKPQKWKMTTTLSEKHIGHETRTDREKKTGAVPTV 300
             P+T       +PA PS  S+T++S+ Q                           +PT+
Sbjct: 241 SSPRT-------TPAIPSTSSVTSMSRSQ------------------------VRDIPTL 300

Query: 301 DXXXXXXXXXGVTLLDSKKRKRNKPSSKNQTEPGSCSAPTADGDRSEGTSKRNRKRKSWT 360
           D          +TLLDSK+RKR KPSSKN+TEP SCSAPT+ G++SE TSKR R RKSWT
Sbjct: 301 DAPATPLTLTAMTLLDSKRRKRKKPSSKNRTEPESCSAPTSHGEKSEDTSKRKRNRKSWT 347

BLAST of Carg22203 vs. TrEMBL
Match: tr|A0A0A0KUP1|A0A0A0KUP1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G048010 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 2.2e-76
Identity = 185/387 (47.80%), Postives = 215/387 (55.56%), Query Frame = 0

Query: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60
           MA++K NT +G+SNP  GPQ+SIT+RQE TGK KPKVSNN K YLNHLENLATWASG+ S
Sbjct: 1   MARKKSNTNRGSSNPGFGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60

Query: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKXXXXXXXXXXX 120
           +PSLAAFFGQRLA AAESLAV+PD SLF C RCETILQPGSNC+IRIEK           
Sbjct: 61  LPSLAAFFGQRLAAAAESLAVSPDPSLFLCARCETILQPGSNCNIRIEKNTAKKRRRHKK 120

Query: 121 XXXXXXXXXXXXXHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVER 180
                        H+CSCRNIKRGTPKGHMKVLY      +VK V VKDGKECE      
Sbjct: 121 GSNLTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECE------ 180

Query: 181 PTEILTIDAPKIP---------------------------DASAIPPPTGDITALDNPAI 240
             +I T+D PKIP                           D SAI  PTGDI+ +D PAI
Sbjct: 181 -NKIFTMDTPKIPPLTTVDCLXXXXXXXXXXXXXRDDLTIDTSAI-SPTGDISVVDGPAI 240

Query: 241 QLPKTEGILNINSPATPSAVSITTLSKPQKWKMTTTLSEKHIGHETRTDREKKTGAVPTV 300
             P+T       +PA  S +S+T++S+ Q                           +PT+
Sbjct: 241 SSPRT-------TPAISSTLSVTSISRSQ------------------------VRDIPTL 300

Query: 301 DXXXXXXXXXGVTLLDSKKRKRNKPSSKNQTEPGSCSAPTADGDRSEGTSKRNRKRKSWT 360
           D         G+  LD                  SCS PT        TSKR R RKSWT
Sbjct: 301 DAPATPLTLTGMXXLDXXXXXXXXXXXXXXXXXXSCSGPTXXXXXXXXTSKRKRNRKSWT 347

BLAST of Carg22203 vs. TrEMBL
Match: tr|W9QS81|W9QS81_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_024280 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 5.9e-37
Identity = 131/367 (35.69%), Postives = 178/367 (48.50%), Query Frame = 0

Query: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSN--NVKTYL--NHLENLATWAS 60
           M KR G   K A N   G  D+I++R+EITGK +       N K  L   H+E LA WA 
Sbjct: 1   MGKRGG--AKKAPNSVLGSNDNISLREEITGKKQKNKGGTCNAKNILKVEHIERLAVWAG 60

Query: 61  GKASIPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEK-XXXXXX 120
           G+AS+P  AAF+GQ+LA+  ESL + P+ SL  CQRCET+LQPG NC+IRIEK       
Sbjct: 61  GEASMPCFAAFYGQKLASLGESLGLPPNPSLVACQRCETVLQPGFNCTIRIEKNKAKSCR 120

Query: 121 XXXXXXXXXXXXXXXXXXHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECET 180
                             H CS RN++RGTPKGHMK +Y         P  +K  K+ ++
Sbjct: 121 RRSKKSFTPNQNNVVYTCHFCSNRNLRRGTPKGHMKEIY---------PSKIKTTKKSKS 180

Query: 181 SAVERPTEILTIDAPKIPDASAIPPPTGDITALDNPAIQ-LPKTEGILNI-NSPATPSAV 240
           +       I++ +  +  D         + + +D  A+  +P T G ++I + PATP A 
Sbjct: 181 AQSNSQKPIISEEVSRGKD---------EFSKMDESALSPIPTTLGTVSISDGPATPIA- 240

Query: 241 SITTLSKPQKWKMTTTLSEKHIGHETRTDREKKTGAVPTVDXXXXXXXXXGVTLLDSKKR 300
                                                             G  LLD KKR
Sbjct: 241 ------------------------------------------------GTGPKLLDVKKR 295

Query: 301 KRNKPSSKNQTEPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAE 360
           KRNK ++K   E    S  T D +++ GTS++ R RKSWTSLKE+A ++EQ GK +N+A 
Sbjct: 301 KRNKSTAKKPAESEKSSVST-DAEKTVGTSRKWR-RKSWTSLKEIAESSEQ-GKNQNVAN 295

BLAST of Carg22203 vs. TrEMBL
Match: tr|A0A2R6Q8D5|A0A2R6Q8D5_ACTCH (Ribonuclease P protein component 4 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc20014 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.6e-34
Identity = 123/355 (34.65%), Postives = 164/355 (46.20%), Query Frame = 0

Query: 4   RKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKASIPS 63
           +KG+ KK   NP+SG Q SI++R+E +GK +  V+      L H +NLA WA+ +ASIPS
Sbjct: 3   KKGSYKK-TPNPSSGSQHSISLREESSGKRQTSVNVKSMLKLEHAQNLAVWAASEASIPS 62

Query: 64  LAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKXXXXXXXXXXXXXX 123
           L AFFG RLA   E+L  +PD SLF CQRCE+ILQPG NC++RIEK              
Sbjct: 63  LGAFFGHRLAALGEALGSSPDPSLFPCQRCESILQPGYNCTVRIEKNAAKAKHRRRKPNI 122

Query: 124 XXXXXXXXXXHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVERPTE 183
                     H CS RN+KRGTP+GHMK L          P   K   + E S       
Sbjct: 123 STKNNVVYKCHFCSHRNLKRGTPRGHMKELC---------PPKAKPSLKSEPS------- 182

Query: 184 ILTIDAPKIPDASAIPPPTGDITALDNPAIQLPKTEGILNINSPATPSAVSITTLSKPQK 243
                      ++ + P   +  A  N  I++ KT+ I      A+P+  S+ T      
Sbjct: 183 ----------HSTILKPVNSEEGATGN--IEVKKTDEI------ASPTPPSVRT------ 242

Query: 244 WKMTTTLSEKHIGHETRTDREKKTGAVPTVDXXXXXXXXXGVTLLDSKKRKRNKPSSKNQ 303
                                                   G TLL+ K+RKRN+  SK  
Sbjct: 243 ----------------------------------------GTTLLEGKRRKRNRSGSKKV 273

Query: 304 TEPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPF 359
            E  S SA  A    + G++   RKRKSWTSLKE+A + E    +K +  + IPF
Sbjct: 303 AESESNSA--AIDAETCGSTSNKRKRKSWTSLKEIAESGEHDNNRK-LTNITIPF 273

BLAST of Carg22203 vs. TrEMBL
Match: tr|A0A1Q3AQD4|A0A1Q3AQD4_CEPFO (Rpr2 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_01487 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 2.1e-34
Identity = 126/360 (35.00%), Postives = 162/360 (45.00%), Query Frame = 0

Query: 4   RKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSN-NVKTYL--NHLENLATWASGKAS 63
           ++G  K+ AS P SG   SI++R+  +GK + K    N K+ L   HL+ LA WASG+AS
Sbjct: 3   KRGGAKRAASTP-SGSHKSISLREITSGKRQSKGDTANFKSKLKHEHLQKLAVWASGEAS 62

Query: 64  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKXXXXXXXXXXX 123
           IP LAAFFG RLA   ES  + PD+SLF CQRCETILQPG NC++RIEK           
Sbjct: 63  IPPLAAFFGHRLAAIGESSGIQPDSSLFPCQRCETILQPGFNCTVRIEKNKKKAGHGRKK 122

Query: 124 XXXXXXXXXXXXXHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVER 183
                        H CS +N KRGT KGHMK +       +VKP    +    +      
Sbjct: 123 PHNTVQNYVVVKCHFCSHQNAKRGTRKGHMKEI----CLPKVKPSSKSELSTSKLQKCSL 182

Query: 184 PTEILTIDAPKIPDASAIPPPTGDITALDNPAIQLPKTEGILNINSPATPSAVSITTLSK 243
             +I + D     D  A P   GD T  D+P   L +T                      
Sbjct: 183 EKDIGSKDEGFTVDEIASPAIAGDTTVTDSPTTSLVRT---------------------- 242

Query: 244 PQKWKMTTTLSEKHIGHETRTDREKKTGAVPTVDXXXXXXXXXGVTLLDSKKRKRNKPSS 303
                                                      G++LLD+K RKR +  S
Sbjct: 243 -------------------------------------------GMSLLDAKTRKRKRSCS 289

Query: 304 KNQTEPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL 361
           K   E  S SA    G+ +   SK  RKRKSWTSLK++A ++ QS   +N+  LAIPF L
Sbjct: 303 KKLAETESASAEVDSGNTASTLSK--RKRKSWTSLKQLAESSAQS-NSRNVTNLAIPFLL 289

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022931505.15.0e-17395.84uncharacterized protein LOC111437660 [Cucurbita moschata][more]
XP_023553160.14.0e-14687.81uncharacterized protein LOC111810649 [Cucurbita pepo subsp. pepo][more]
XP_022984531.13.8e-14487.81uncharacterized protein LOC111482797 [Cucurbita maxima][more]
XP_008452026.15.2e-9353.49PREDICTED: uncharacterized protein LOC103493157 [Cucumis melo][more]
XP_004146565.13.4e-7647.80PREDICTED: uncharacterized protein LOC101220608 [Cucumis sativus] >KGN53340.1 hy... [more]
Match NameE-valueIdentityDescription
AT5G41270.13.9e-1834.65RNAse P, Rpr2/Rpp21 subunit (InterPro:IPR007175)[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3BU13|A0A1S3BU13_CUCME3.4e-9353.49uncharacterized protein LOC103493157 OS=Cucumis melo OX=3656 GN=LOC103493157 PE=... [more]
tr|A0A0A0KUP1|A0A0A0KUP1_CUCSA2.2e-7647.80Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G048010 PE=4 SV=1[more]
tr|W9QS81|W9QS81_9ROSA5.9e-3735.69Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_024280 PE=4 SV=1[more]
tr|A0A2R6Q8D5|A0A2R6Q8D5_ACTCH1.6e-3434.65Ribonuclease P protein component 4 like OS=Actinidia chinensis var. chinensis OX... [more]
tr|A0A1Q3AQD4|A0A1Q3AQD4_CEPFO2.1e-3435.00Rpr2 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_014... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007175Rpr2
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg22203-RACarg22203-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007175RNAse P, Rpr2/Rpp21 subunitPFAMPF04032Rpr2coord: 45..136
e-value: 1.9E-10
score: 40.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 273..287
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 244..351
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 318..336
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 250..269
NoneNo IPR availablePANTHERPTHR36072FAMILY NOT NAMEDcoord: 9..360