Cucsa.105830 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.105830
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionEthylene-responsive transcription factor
Locationscaffold00929 : 311431 .. 312400 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTTCTTCTTCTTCTTCAACCAAAACTCATTTATATACACATCTCCCTCTTCCATTGCAGCCTTTTCTTCTTCTTCTTCCTCTTTGACAACAACCGATCCATGGCTCGTCCACAACAACGCTATCGTGGCGTTCGCCAACGACATTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCTCTATTGTAATTCTCTTCTTTTTCCTCTTCGTTAAATCTCATATTGTTTTATATGATCAGTAGAGCTTGAAATTTTCATAGAGAAAGTATTGTAAAAATGTATACTTTTTCTACTTTAAAACTATGAACTTTAGATCTGCTTGCTATCCAATTCAACATAATTCTACACGCATGTGTTCCCTACTCCCTTTCTTTTTTTGCTAGTGACCCAAGCGCTTAGGTTTGGTATCATCTCTTAAATTGTCAATTGACGAAACTAAATGTGAATAACTTATGTATTTTCAGGAAGACGAGAATATGGTTAGGAACGTTTGAGACGGCAGAGGATGCAGCTCGAGCTTATGACGAGGCAGCACGGTTGATGTGCGGTCCAAAAGCACGAACCAACTTTCCATACAATCCGAACGACCAACAGTCGTCGTCGTCATTCTCCTCCTCCTCCAAGCTTCTCTCTGCCGCATTGATAGAGAAATTACATAAATGTCACTTAGCTTCACTCCAAATTGCAAAACAACACGTCCACAAACAACATGCTGGATTCGAGCCGAGCTACCTCGCATACAGTGGATCACCTCCACCGATCATTACCGGAGCCACCACTAGTCAATGGGCATCAGATGAAACGTGGGTCTATTCCAACAAAGGTGATCAAATGGAGATGAATAACAATAACAATAATTATAATAACAACATTCATCATCAACAATGCCAACTTGAACCTCTTGAAGATGATCATATCGAACAAATGATACAAGAGCTGCTAGACCTCGGATCATTCGAAATTATTACATAA

mRNA sequence

CCTTCTTCTTCTTCTTCAACCAAAACTCATTTATATACACATCTCCCTCTTCCATTGCAGCCTTTTCTTCTTCTTCTTCCTCTTTGACAACAACCGATCCATGGCTCGTCCACAACAACGCTATCGTGGCGTTCGCCAACGACATTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCTCTATTGAAGACGAGAATATGGTTAGGAACGTTTGAGACGGCAGAGGATGCAGCTCGAGCTTATGACGAGGCAGCACGGTTGATGTGCGGTCCAAAAGCACGAACCAACTTTCCATACAATCCGAACGACCAACAGTCGTCGTCGTCATTCTCCTCCTCCTCCAAGCTTCTCTCTGCCGCATTGATAGAGAAATTACATAAATGTCACTTAGCTTCACTCCAAATTGCAAAACAACACGTCCACAAACAACATGCTGGATTCGAGCCGAGCTACCTCGCATACAGTGGATCACCTCCACCGATCATTACCGGAGCCACCACTAGTCAATGGGCATCAGATGAAACGTGGGTCTATTCCAACAAAGGTGATCAAATGGAGATGAATAACAATAACAATAATTATAATAACAACATTCATCATCAACAATGCCAACTTGAACCTCTTGAAGATGATCATATCGAACAAATGATACAAGAGCTGCTAGACCTCGGATCATTCGAAATTATTACATAA

Coding sequence (CDS)

CCTTCTTCTTCTTCTTCAACCAAAACTCATTTATATACACATCTCCCTCTTCCATTGCAGCCTTTTCTTCTTCTTCTTCCTCTTTGACAACAACCGATCCATGGCTCGTCCACAACAACGCTATCGTGGCGTTCGCCAACGACATTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCTCTATTGAAGACGAGAATATGGTTAGGAACGTTTGAGACGGCAGAGGATGCAGCTCGAGCTTATGACGAGGCAGCACGGTTGATGTGCGGTCCAAAAGCACGAACCAACTTTCCATACAATCCGAACGACCAACAGTCGTCGTCGTCATTCTCCTCCTCCTCCAAGCTTCTCTCTGCCGCATTGATAGAGAAATTACATAAATGTCACTTAGCTTCACTCCAAATTGCAAAACAACACGTCCACAAACAACATGCTGGATTCGAGCCGAGCTACCTCGCATACAGTGGATCACCTCCACCGATCATTACCGGAGCCACCACTAGTCAATGGGCATCAGATGAAACGTGGGTCTATTCCAACAAAGGTGATCAAATGGAGATGAATAACAATAACAATAATTATAATAACAACATTCATCATCAACAATGCCAACTTGAACCTCTTGAAGATGATCATATCGAACAAATGATACAAGAGCTGCTAGACCTCGGATCATTCGAAATTATTACATAA

Protein sequence

LLLLLQPKLIYIHISLFHCSLFFFFFLFDNNRSMARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAYSGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHIEQMIQELLDLGSFEIIT*
Homology
[Close]
BLAST of Cucsa.105830 vs. Swiss-Prot
Match: ERF03_ARATH (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana GN=ERF003 PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.5e-49
Identity = 112/194 (57.73%), Postives = 130/194 (67.01%), Query Frame = 1 

Query: 34  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 93
           MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGP+AR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 94  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAY 153
           TNFPYNPN     +  +SSSKLLSA L  KLHKC++ASLQ+ KQ   +       S  A 
Sbjct: 61  TNFPYNPN-----AIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSAD 120

Query: 154 SGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHIE 213
           S        G T     ++E+ +     +  E+   + N N      Q    PLE+DHIE
Sbjct: 121 S-------DGVT-----ANESHLNRGVTETTEIKWEDGNAN-----MQQNFRPLEEDHIE 172

Query: 214 QMIQELLDLGSFEI 228
           QMI+ELL  GS E+
Sbjct: 181 QMIEELLHYGSIEL 172

[Close]
BLAST of Cucsa.105830 vs. Swiss-Prot
Match: PZ02_LUPPO (Protein PPLZ02 OS=Lupinus polyphyllus GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.3e-42
Identity = 99/183 (54.10%), Postives = 114/183 (62.30%), Query Frame = 1 

Query: 34  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 93
           MARPQQRYRG RQRHWGSWVSEIRH +LKTRIW GTFE+AEDAARAYDEAARLMCG +AR
Sbjct: 1   MARPQQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRAR 60

Query: 94  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAY 153
           TNFPYNPN  Q     SSSSKLLSA LI KLH+C++ASLQ+ +           PS L  
Sbjct: 61  TNFPYNPNASQ-----SSSSKLLSATLIAKLHRCYMASLQMTR-----------PSSLP- 120

Query: 154 SGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQC--QLEPLEDDH 213
               P II     +        +   K  + E      N +      +C  Q +PLE+DH
Sbjct: 121 --EAPRIIASPNNAVKGIGADAMLLPKKREQEEQETGGNLDFKKVKVECSQQFKPLEEDH 164

Query: 214 IEQ 215
           I Q
Sbjct: 181 IAQ 164

[Close]
BLAST of Cucsa.105830 vs. Swiss-Prot
Match: WIN1_ARATH (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana GN=WIN1 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.3e-26
Identity = 62/101 (61.39%), Postives = 72/101 (71.29%), Query Frame = 1 

Query: 39  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPY 98
           +++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 99  NPND------------QQSSSSFSSSSKLLSAALIEKLHKC 128
           N N+              S+ S S+SS  LS+ L  KL KC
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC 105

[Close]
BLAST of Cucsa.105830 vs. Swiss-Prot
Match: SHN3_ARATH (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana GN=SHN3 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.5e-22
Identity = 55/91 (60.44%), Postives = 66/91 (72.53%), Query Frame = 1 

Query: 39  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPY 98
           +++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 99  NPNDQQSSSSFSS---SSKLLSAALIEKLHK 127
             ++  +S   +S   S K LS  L  KL K
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRK 95

[Close]
BLAST of Cucsa.105830 vs. Swiss-Prot
Match: SHN2_ARATH (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana GN=SHN2 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.5e-22
Identity = 51/86 (59.30%), Postives = 64/86 (74.42%), Query Frame = 1 

Query: 39  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPY 98
           +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 99  NPNDQQSSSSFSSSSKLLSAALIEKL 125
             +++ S      +S L+S   + +L
Sbjct: 65  VKSEEGSDHVKDVNSPLMSPKSLSEL 90

[Close]
BLAST of Cucsa.105830 vs. TrEMBL
Match: A0A0A0KA12_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432080 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 9.6e-112
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 1 

Query: 34  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 93
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 94  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAY 153
           TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAY
Sbjct: 61  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAY 120

Query: 154 SGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHIE 213
           SGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHIE
Sbjct: 121 SGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHIE 180

Query: 214 QMIQELLDLGSFEIIT 230
           QMIQELLDLGSFEIIT
Sbjct: 181 QMIQELLDLGSFEIIT 196

[Close]
BLAST of Cucsa.105830 vs. TrEMBL
Match: V4S0C2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026602mg PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 9.7e-56
Identity = 119/194 (61.34%), Postives = 133/194 (68.56%), Query Frame = 1 

Query: 34  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 93
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 94  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAY 153
           TNFPYNPN+ Q     SSSSKLLSA L  KLHKCH+ASLQ  K++V K  A  +     +
Sbjct: 61  TNFPYNPNEPQ-----SSSSKLLSATLAAKLHKCHMASLQATKKNVPKPPAVLQSQCKPF 120

Query: 154 SGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHIE 213
           +G       G   ++W ++ET V S    Q                   Q + LEDDHIE
Sbjct: 121 AGKSIDASAGWPETKWINEETQVRSTNNSQ-------------------QFKALEDDHIE 170

Query: 214 QMIQELLDLGSFEI 228
           QMI+ELLD GS E+
Sbjct: 181 QMIEELLDYGSIEL 170

[Close]
BLAST of Cucsa.105830 vs. TrEMBL
Match: A0A067E3X8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030482mg PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 2.2e-55
Identity = 118/194 (60.82%), Postives = 133/194 (68.56%), Query Frame = 1 

Query: 34  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 93
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 94  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAY 153
           TNFPYNPN+ Q     SSSSKLLSA L  KLHKCH+ASLQ  K++V K  A  +     +
Sbjct: 61  TNFPYNPNEPQ-----SSSSKLLSATLAAKLHKCHMASLQATKKNVPKPPAVLQSQCKPF 120

Query: 154 SGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHIE 213
           +G       G   ++W +++T V S    Q                   Q + LEDDHIE
Sbjct: 121 AGKSIDTSAGWPETKWINEDTQVRSTNNSQ-------------------QFKALEDDHIE 170

Query: 214 QMIQELLDLGSFEI 228
           QMI+ELLD GS E+
Sbjct: 181 QMIEELLDYGSIEL 170

[Close]
BLAST of Cucsa.105830 vs. TrEMBL
Match: A0A059BXE2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03947 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.0e-53
Identity = 118/203 (58.13%), Postives = 138/203 (67.98%), Query Frame = 1 

Query: 34  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 93
           M R QQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MTRTQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 94  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAY 153
           TNFPYNPN+ Q     +SSSKLLSA L  KLHKCHLASLQ+AK+   K+     P +   
Sbjct: 61  TNFPYNPNEPQ-----TSSSKLLSATLAAKLHKCHLASLQVAKKSAKKEIDDSHPGHFRR 120

Query: 154 SGSPPPIITGATTSQ---------WASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQL 213
            G         T+SQ         W+ ++  V   +  +M  +++    +N++     Q 
Sbjct: 121 EGD-------RTSSQRNGDQRVGGWSEEKPTVV--QWHEMNWDSDEGQGDNSVQ----QF 180

Query: 214 EPLEDDHIEQMIQELLDLGSFEI 228
            PLEDDHIEQMI+ELLD GS E+
Sbjct: 181 RPLEDDHIEQMIEELLDYGSIEL 185

[Close]
BLAST of Cucsa.105830 vs. TrEMBL
Match: V7AT70_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G159500g PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.2e-52
Identity = 126/206 (61.17%), Postives = 140/206 (67.96%), Query Frame = 1 

Query: 34  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 93
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 94  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLA--SLQIAKQHVHKQHAGFEPSYL 153
           TNFPYNPN+       SSSSKLLSA L  KLHKCH+A  SLQ+AKQ   + +   + S  
Sbjct: 61  TNFPYNPNEPH-----SSSSKLLSATLTAKLHKCHMASLSLQMAKQKPPQNNQEPQSSQG 120

Query: 154 AYSGSPPPIITGA---TTSQWASDE----TWVYSN---KGDQMEMNNNNNNYNNNIHHQQ 213
           + S S   II G+   T  +W  +      W+  N    G Q+E           + HQQ
Sbjct: 121 SNSFSSANIIAGSSAETGFRWPENRHEELRWLEGNWVGVGGQVE-----------VSHQQ 180

Query: 214 CQLEPLEDDHIEQMIQELLDLGSFEI 228
            Q   LEDDHIEQMIQELLD GS E+
Sbjct: 181 FQ-PVLEDDHIEQMIQELLDYGSIEL 189

[Close]
BLAST of Cucsa.105830 vs. TAIR10
Match: AT5G25190.1 (AT5G25190.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 197.6 bits (501), Expect = 8.4e-51
Identity = 112/194 (57.73%), Postives = 130/194 (67.01%), Query Frame = 1 

Query: 34  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 93
           MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGP+AR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 94  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAY 153
           TNFPYNPN     +  +SSSKLLSA L  KLHKC++ASLQ+ KQ   +       S  A 
Sbjct: 61  TNFPYNPN-----AIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSAD 120

Query: 154 SGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHIE 213
           S        G T     ++E+ +     +  E+   + N N      Q    PLE+DHIE
Sbjct: 121 S-------DGVT-----ANESHLNRGVTETTEIKWEDGNAN-----MQQNFRPLEEDHIE 172

Query: 214 QMIQELLDLGSFEI 228
           QMI+ELL  GS E+
Sbjct: 181 QMIEELLHYGSIEL 172

[Close]
BLAST of Cucsa.105830 vs. TAIR10
Match: AT1G15360.1 (AT1G15360.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 120.6 bits (301), Expect = 1.3e-27
Identity = 62/101 (61.39%), Postives = 72/101 (71.29%), Query Frame = 1 

Query: 39  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPY 98
           +++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 99  NPND------------QQSSSSFSSSSKLLSAALIEKLHKC 128
           N N+              S+ S S+SS  LS+ L  KL KC
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC 105

[Close]
BLAST of Cucsa.105830 vs. TAIR10
Match: AT5G25390.2 (AT5G25390.2 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 106.7 bits (265), Expect = 2.0e-23
Identity = 55/91 (60.44%), Postives = 66/91 (72.53%), Query Frame = 1 

Query: 39  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPY 98
           +++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 99  NPNDQQSSSSFSS---SSKLLSAALIEKLHK 127
             ++  +S   +S   S K LS  L  KL K
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRK 95

[Close]
BLAST of Cucsa.105830 vs. TAIR10
Match: AT5G11190.1 (AT5G11190.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 106.3 bits (264), Expect = 2.6e-23
Identity = 51/86 (59.30%), Postives = 64/86 (74.42%), Query Frame = 1 

Query: 39  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPY 98
           +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 99  NPNDQQSSSSFSSSSKLLSAALIEKL 125
             +++ S      +S L+S   + +L
Sbjct: 65  VKSEEGSDHVKDVNSPLMSPKSLSEL 90

[Close]
BLAST of Cucsa.105830 vs. TAIR10
Match: AT1G22190.1 (AT1G22190.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 94.0 bits (232), Expect = 1.3e-19
Identity = 49/97 (50.52%), Postives = 62/97 (63.92%), Query Frame = 1 

Query: 33  SMARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKA 92
           S A+P + YRGVRQRHWG WV+EIR P  +TR+WLGTF+TAE+AA AYD+AA  + G  A
Sbjct: 75  SAAKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFA 134

Query: 93  RTNFP---YNPNDQQSSSSFSSSSKLLSAALIEKLHK 127
           R NFP   +N   Q   SS  +  + +   L E   K
Sbjct: 135 RLNFPDLRHNDEYQPLQSSVDAKLEAICQNLAETTQK 171

[Close]
BLAST of Cucsa.105830 vs. NCBI nr
Match: gi|778728957|ref|XP_011659507.1| (PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis sativus])

HSP 1 Score: 411.0 bits (1055), Expect = 1.4e-111
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 1 

Query: 34  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 93
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 94  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAY 153
           TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAY
Sbjct: 61  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAY 120

Query: 154 SGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHIE 213
           SGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHIE
Sbjct: 121 SGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHIE 180

Query: 214 QMIQELLDLGSFEIIT 230
           QMIQELLDLGSFEIIT
Sbjct: 181 QMIQELLDLGSFEIIT 196

[Close]
BLAST of Cucsa.105830 vs. NCBI nr
Match: gi|659122485|ref|XP_008461170.1| (PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo])

HSP 1 Score: 373.6 bits (958), Expect = 2.4e-100
Identity = 186/203 (91.63%), Postives = 189/203 (93.10%), Query Frame = 1 

Query: 34  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 93
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 94  TNFPYNPNDQQSSSSF--SSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYL 153
           TNFPYN NDQQSSSSF  SSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQH GFEPSYL
Sbjct: 61  TNFPYNLNDQQSSSSFSSSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHPGFEPSYL 120

Query: 154 AYSGSPPPIITGATTSQWASDETWVYSNKGDQMEM-----NNNNNNYNNNIHHQQCQLEP 213
           AY GSPPP ITGATTS+W SDETWVYS+KG Q+EM     NNNNNN NNNIHHQQCQLEP
Sbjct: 121 AYGGSPPPSITGATTSRWTSDETWVYSDKG-QLEMNNNNNNNNNNNNNNNIHHQQCQLEP 180

Query: 214 LEDDHIEQMIQELLDLGSFEIIT 230
           LEDDHIEQMIQELLDLGSFEIIT
Sbjct: 181 LEDDHIEQMIQELLDLGSFEIIT 202

[Close]
BLAST of Cucsa.105830 vs. NCBI nr
Match: gi|1012229873|ref|XP_015938082.1| (PREDICTED: ethylene-responsive transcription factor ERF003-like [Arachis duranensis])

HSP 1 Score: 229.6 bits (584), Expect = 5.7e-57
Identity = 134/215 (62.33%), Postives = 144/215 (66.98%), Query Frame = 1 

Query: 34  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 93
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 94  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAY 153
           TNFP+NPN  QSSSS SSSSKLLS  L  KLHKCHLASL  A Q  + +    +P+    
Sbjct: 61  TNFPFNPNLSQSSSSSSSSSKLLSPTLTAKLHKCHLASL--ALQMSNNKQKSSQPN---K 120

Query: 154 SGSPPPIITGATTSQ---------WASDETWVYSNKGDQMEMNNNNNNYNNNI------- 213
              PPP  + ++TS               T  Y         NNNNNN NNN        
Sbjct: 121 DPQPPPPSSSSSTSSNNRLFNNQFPIGAGTIAYEELHWLEGNNNNNNNINNNNWGGIIEG 180

Query: 214 HHQ----QCQLEP-LEDDHIEQMIQELLDLGSFEI 228
           HHQ    Q Q +P LEDDHIEQMIQELLD GS E+
Sbjct: 181 HHQVEVAQQQFQPVLEDDHIEQMIQELLDCGSIEL 210

[Close]
BLAST of Cucsa.105830 vs. NCBI nr
Match: gi|567869853|ref|XP_006427548.1| (hypothetical protein CICLE_v10026602mg [Citrus clementina])

HSP 1 Score: 224.9 bits (572), Expect = 1.4e-55
Identity = 119/194 (61.34%), Postives = 133/194 (68.56%), Query Frame = 1 

Query: 34  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 93
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 94  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAY 153
           TNFPYNPN+ Q     SSSSKLLSA L  KLHKCH+ASLQ  K++V K  A  +     +
Sbjct: 61  TNFPYNPNEPQ-----SSSSKLLSATLAAKLHKCHMASLQATKKNVPKPPAVLQSQCKPF 120

Query: 154 SGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHIE 213
           +G       G   ++W ++ET V S    Q                   Q + LEDDHIE
Sbjct: 121 AGKSIDASAGWPETKWINEETQVRSTNNSQ-------------------QFKALEDDHIE 170

Query: 214 QMIQELLDLGSFEI 228
           QMI+ELLD GS E+
Sbjct: 181 QMIEELLDYGSIEL 170

[Close]
BLAST of Cucsa.105830 vs. NCBI nr
Match: gi|568821626|ref|XP_006465255.1| (PREDICTED: ethylene-responsive transcription factor ERF003-like [Citrus sinensis])

HSP 1 Score: 224.2 bits (570), Expect = 2.4e-55
Identity = 118/194 (60.82%), Postives = 133/194 (68.56%), Query Frame = 1 

Query: 34  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 93
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 60

Query: 94  TNFPYNPNDQQSSSSFSSSSKLLSAALIEKLHKCHLASLQIAKQHVHKQHAGFEPSYLAY 153
           TNFPYNPN+ Q     SSSSKLLSA L  KLHKCH+ASLQ  K++V K  A  +     +
Sbjct: 61  TNFPYNPNESQ-----SSSSKLLSATLAAKLHKCHMASLQATKKNVPKPPAVLQSQCKPF 120

Query: 154 SGSPPPIITGATTSQWASDETWVYSNKGDQMEMNNNNNNYNNNIHHQQCQLEPLEDDHIE 213
           +G       G   ++W +++T V S    Q                   Q + LEDDHIE
Sbjct: 121 AGKSIDTSAGWPETKWINEDTQVRSTNNSQ-------------------QFKALEDDHIE 170

Query: 214 QMIQELLDLGSFEI 228
           QMI+ELLD GS E+
Sbjct: 181 QMIEELLDYGSIEL 170

The following BLAST results are available for this feature:
BLAST of Cucsa.105830 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF03_ARATH1.5e-4957.73Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana GN=ERF00... [more]
PZ02_LUPPO2.3e-4254.10Protein PPLZ02 OS=Lupinus polyphyllus GN=PPLZ02 PE=2 SV=1[more]
WIN1_ARATH2.3e-2661.39Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana GN=WIN1 PE... [more]
SHN3_ARATH3.5e-2260.44Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana GN=SHN3... [more]
SHN2_ARATH4.5e-2259.30Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana GN=SHN2... [more]
BLAST of Cucsa.105830 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KA12_CUCSA9.6e-112100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432080 PE=4 SV=1[more]
V4S0C2_9ROSI9.7e-5661.34Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026602mg PE=4 SV=1[more]
A0A067E3X8_CITSI2.2e-5560.82Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030482mg PE=4 SV=1[more]
A0A059BXE2_EUCGR2.0e-5358.13Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03947 PE=4 SV=1[more]
V7AT70_PHAVU2.2e-5261.17Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G159500g PE=4 SV=1[more]
BLAST of Cucsa.105830 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G25190.18.4e-5157.73 Integrase-type DNA-binding superfamily protein[more]
AT1G15360.11.3e-2761.39 Integrase-type DNA-binding superfamily protein[more]
AT5G25390.22.0e-2360.44 Integrase-type DNA-binding superfamily protein[more]
AT5G11190.12.6e-2359.30 Integrase-type DNA-binding superfamily protein[more]
AT1G22190.11.3e-1950.52 Integrase-type DNA-binding superfamily protein[more]
BLAST of Cucsa.105830 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778728957|ref|XP_011659507.1|1.4e-111100.00PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis sativus... [more]
gi|659122485|ref|XP_008461170.1|2.4e-10091.63PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo][more]
gi|1012229873|ref|XP_015938082.1|5.7e-5762.33PREDICTED: ethylene-responsive transcription factor ERF003-like [Arachis duranen... [more]
gi|567869853|ref|XP_006427548.1|1.4e-5561.34hypothetical protein CICLE_v10026602mg [Citrus clementina][more]
gi|568821626|ref|XP_006465255.1|2.4e-5560.82PREDICTED: ethylene-responsive transcription factor ERF003-like [Citrus sinensis... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
IPR017392AP2/ERF-transcript_factor
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.105830.1Cucsa.105830.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 63..79
score: 4.1E-11coord: 41..52
score: 4.1
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 40..97
score: 2.3
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 40..89
score: 3.0
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 40..103
score: 4.9
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 40..97
score: 21
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 40..99
score: 6.02
IPR017392AP2/ERF transcription factor ERF/PTI6PANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 34..227
score: 2.6
NoneNo IPR availablePANTHERPTHR31194:SF4ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003coord: 34..227
score: 2.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.105830Cla015332Watermelon (97103) v1cgywmB142
Cucsa.105830Cla021006Watermelon (97103) v1cgywmB144
Cucsa.105830Csa7G432080Cucumber (Chinese Long) v2cgycuB126
Cucsa.105830Csa4G652640Cucumber (Chinese Long) v2cgycuB125
Cucsa.105830MELO3C016980Melon (DHL92) v3.5.1cgymeB134
Cucsa.105830MELO3C023458Melon (DHL92) v3.5.1cgymeB133
Cucsa.105830ClCG05G016530Watermelon (Charleston Gray)cgywcgB143
Cucsa.105830ClCG09G003240Watermelon (Charleston Gray)cgywcgB141
Cucsa.105830CSPI07G20200Wild cucumber (PI 183967)cgycpiB127
Cucsa.105830CSPI04G26430Wild cucumber (PI 183967)cgycpiB126
Cucsa.105830CmaCh17G008890Cucurbita maxima (Rimu)cgycmaB0237
Cucsa.105830CmaCh01G001720Cucurbita maxima (Rimu)cgycmaB0238
Cucsa.105830CmaCh08G005960Cucurbita maxima (Rimu)cgycmaB0241
Cucsa.105830CmoCh08G005880Cucurbita moschata (Rifu)cgycmoB0240
Cucsa.105830CmoCh17G008580Cucurbita moschata (Rifu)cgycmoB0236
Cucsa.105830Lsi02G026750Bottle gourd (USVL1VR-Ls)cgylsiB133
Cucsa.105830Lsi04G020910Bottle gourd (USVL1VR-Ls)cgylsiB134
Cucsa.105830Cp4.1LG17g08820Cucurbita pepo (Zucchini)cgycpeB0230
Cucsa.105830Cp4.1LG12g07360Cucurbita pepo (Zucchini)cgycpeB0229
Cucsa.105830MELO3C016980.2Melon (DHL92) v3.6.1cgymedB134
Cucsa.105830MELO3C023458.2Melon (DHL92) v3.6.1cgymedB133
Cucsa.105830CsaV3_4G036780Cucumber (Chinese Long) v3cgycucB130
Cucsa.105830CsaV3_7G031980Cucumber (Chinese Long) v3cgycucB131
Cucsa.105830Cla97C09G165470Watermelon (97103) v2cgywmbB141
Cucsa.105830Carg13510Silver-seed gourdcarcgyB0520
Cucsa.105830Carg09615Silver-seed gourdcarcgyB1144
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cucsa.105830Cucsa.271720Cucumber (Gy14) v1cgycgyB054
The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.105830Melon (DHL92) v3.6.1cgymedB135
Cucsa.105830Silver-seed gourdcarcgyB0227
Cucsa.105830Cucumber (Chinese Long) v3cgycucB129
Cucsa.105830Watermelon (97103) v2cgywmbB138
Cucsa.105830Wax gourdcgywgoB161
Cucsa.105830Cucumber (Gy14) v1cgycgyB032
Cucsa.105830Cucurbita moschata (Rifu)cgycmoB0235
Cucsa.105830Wild cucumber (PI 183967)cgycpiB125
Cucsa.105830Cucumber (Chinese Long) v2cgycuB124
Cucsa.105830Melon (DHL92) v3.5.1cgymeB135
Cucsa.105830Watermelon (97103) v1cgywmB143
Cucsa.105830Cucurbita pepo (Zucchini)cgycpeB0234
Cucsa.105830Bottle gourd (USVL1VR-Ls)cgylsiB136