Carg09615 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg09615
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ethylene-responsive transcription factor
Location	Cucurbita_argyrosperma_scaffold_029 : 1070765 .. 1071526 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCCTATCACTCACTTTCTCTATTCCCATCACCAACCAAGCTCATAGCTCTTCCGCCATTGGAGCACCTCTTCAAGCTTCTTCTTCTTCTTCTTCTTCTCCGACGATCGATCCATGGCCCGACCTCAACAGCGCTATCGTGGCGTCCGACAACGACATTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCTCTATTGTAATTCTCCTTCTTCTTCAATTTTCATAGAGAAAGCATTGAAATTTTTATATATTTTCAACTTTTCATGTGTTAAAAATCAAAACTTTTTCAGGAAGACAAGAATATGGTTGGGGACGTTCGAGACAGCGGAGGACGCAGCCCGAGCTTATGACGAGGCAGCTCGGCTGATGTGCGGTCCAAAGGCACGAACCAACTTCCAATTCAATCCAAACGATCAACAATCGTCATCGTCGTCATCGTCTTCCTCCAAACTTCTCTCCGCCCCGCTGATGGCGAAATTACACAAATGTCATTTAGCCTCACTACAAATCGCCAAAAAACACACTGCCCATAAACAACACCCCGGATTCGAGCCCAACTACGCCGTATACGGCGGCCCTTCCCCGAGCATTTCCCAAACAACCACCCACCGGTGGCGACAAGAAGAAACCCAAATAGAGACCAACAACGACAACAACAACATTCATCATCAACAATGCCTTCAACCACTTGAGGATGATGACATTGAACAAATGATACAAGAGCTATTAGACCTCGGATCATTCGAAATTATTACATGA

mRNA sequence

ATGACCCTATCACTCACTTTCTCTATTCCCATCACCAACCAAGCTCATAGCTCTTCCGCCATTGGAGCACCTCTTCAAGCTTCTTCTTCTTCTTCTTCTTCTCCGACGATCGATCCATGGCCCGACCTCAACAGCGCTATCGTGGCGTCCGACAACGACATTGGGGCTCTTGGGAAGACAAGAATATGGTTGGGGACGTTCGAGACAGCGGAGGACGCAGCCCGAGCTTATGACGAGGCAGCTCGGCTGATGTGCGGTCCAAAGGCACGAACCAACTTCCAATTCAATCCAAACGATCAACAATCGTCATCGTCGTCATCGTCTTCCTCCAAACTTCTCTCCGCCCCGCTGATGGCGAAATTACACAAATGTCATTTAGCCTCACTACAAATCGCCAAAAAACACACTGCCCATAAACAACACCCCGGATTCGAGCCCAACTACGCCGTATACGGCGGCCCTTCCCCGAGCATTTCCCAAACAACCACCCACCGGTGGCGACAAGAAGAAACCCAAATAGAGACCAACAACGACAACAACAACATTCATCATCAACAATGCCTTCAACCACTTGAGGATGATGACATTGAACAAATGATACAAGAGCTATTAGACCTCGGATCATTCGAAATTATTACATGA

Coding sequence (CDS)

ATGACCCTATCACTCACTTTCTCTATTCCCATCACCAACCAAGCTCATAGCTCTTCCGCCATTGGAGCACCTCTTCAAGCTTCTTCTTCTTCTTCTTCTTCTCCGACGATCGATCCATGGCCCGACCTCAACAGCGCTATCGTGGCGTCCGACAACGACATTGGGGCTCTTGGGAAGACAAGAATATGGTTGGGGACGTTCGAGACAGCGGAGGACGCAGCCCGAGCTTATGACGAGGCAGCTCGGCTGATGTGCGGTCCAAAGGCACGAACCAACTTCCAATTCAATCCAAACGATCAACAATCGTCATCGTCGTCATCGTCTTCCTCCAAACTTCTCTCCGCCCCGCTGATGGCGAAATTACACAAATGTCATTTAGCCTCACTACAAATCGCCAAAAAACACACTGCCCATAAACAACACCCCGGATTCGAGCCCAACTACGCCGTATACGGCGGCCCTTCCCCGAGCATTTCCCAAACAACCACCCACCGGTGGCGACAAGAAGAAACCCAAATAGAGACCAACAACGACAACAACAACATTCATCATCAACAATGCCTTCAACCACTTGAGGATGATGACATTGAACAAATGATACAAGAGCTATTAGACCTCGGATCATTCGAAATTATTACATGA

Protein sequence

MTLSLTFSIPITNQAHSSSAIGAPLQASSSSSSSPTIDPWPDLNSAIVASDNDIGALGKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQFNPNDQQSSSSSSSSSKLLSAPLMAKLHKCHLASLQIAKKHTAHKQHPGFEPNYAVYGGPSPSISQTTTHRWRQEETQIETNNDNNNIHHQQCLQPLEDDDIEQMIQELLDLGSFEIIT

Homology

[Close]

BLAST of Carg09615 vs. NCBI nr
Match: XP_022954016.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita moschata])

HSP 1 Score: 266.9 bits (681), Expect = 5.8e-68
Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 59  KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQFNPNXXXXXXXXXXXXXXXSAPLM 118
           KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQFNPNXXXXXXXXXXXXXXXSAPLM
Sbjct: 29  KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQFNPNXXXXXXXXXXXXXXXSAPLM 88

Query: 119 AKLHKCHLASLQIAKKHTAHKQHPGFEPNYAVYGGPSPSISQTTTHRWRQEETQIETXXX 178
           AKLHKCHLASLQIAKKH AHKQHPGFEPNYAVYGGPSPSISQTTTHRWRQEETQIETXXX
Sbjct: 89  AKLHKCHLASLQIAKKHAAHKQHPGFEPNYAVYGGPSPSISQTTTHRWRQEETQIETXXX 148

Query: 179 XXXXHHQQCLQPLEDDDIEQMIQELLDLGSFEIIT 214
           XXXXHHQQCLQPLEDDDIEQMIQELLDLGSFEIIT
Sbjct: 149 XXXXHHQQCLQPLEDDDIEQMIQELLDLGSFEIIT 183

[Close]

BLAST of Carg09615 vs. NCBI nr
Match: XP_023547696.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 229.6 bits (584), Expect = 1.0e-56
Identity = 138/155 (89.03%), Postives = 138/155 (89.03%), Query Frame = 0


Query: 59  KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQFNPNXXXXXXXXXXXXXXXSAPLM 118
           KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQFNPN XXXXXXXXXXXXXX    M
Sbjct: 29  KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQFNPNDXXXXXXXXXXXXXXXXXXM 88

Query: 119 AKLHKCHLASLQIAKKHTAHKQHPGFEPNYAVYGGPSPSISQTTTHRWRQEETQIETXXX 178
           AKLHKCHLASLQIAKKH AHKQHPGFEPNY VYG P PSISQTTT RWRQEETQ   XXX
Sbjct: 89  AKLHKCHLASLQIAKKHAAHKQHPGFEPNYTVYGVPPPSISQTTTDRWRQEETQXXXXXX 148

Query: 179 XXXXHHQQCLQPLEDDDIEQMIQELLDLGSFEIIT 214
           XXXX    CLQPLEDDDIEQMIQELLDLGSFEIIT
Sbjct: 149 XXXXXXXXCLQPLEDDDIEQMIQELLDLGSFEIIT 183

[Close]

BLAST of Carg09615 vs. NCBI nr
Match: XP_022991609.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita maxima])

HSP 1 Score: 196.1 bits (497), Expect = 1.3e-46
Identity = 127/155 (81.94%), Postives = 127/155 (81.94%), Query Frame = 0


Query: 59  KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQFNPNXXXXXXXXXXXXXXXSAPLM 118
           KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQFNPN XXXXXXXXXXXXXX    M
Sbjct: 29  KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQFNPNDXXXXXXXXXXXXXXXXXXM 88

Query: 119 AKLHKCHLASLQIAKKHTAHKQHPGFEPNYAVYGGPSPSISQTTTHRWRQEETQIETXXX 178
           AKLHKCHLASLQIAKKH AHKQHPGFE NYAVYG P PSISQ               XXX
Sbjct: 89  AKLHKCHLASLQIAKKHAAHKQHPGFESNYAVYGVPPPSISQ--XXXXXXXXXXXXXXXX 148

Query: 179 XXXXHHQQCLQPLEDDDIEQMIQELLDLGSFEIIT 214
           XXXX    CLQPLEDDDIEQMIQELLDLGSFEIIT
Sbjct: 149 XXXXXXXXCLQPLEDDDIEQMIQELLDLGSFEIIT 181

[Close]

BLAST of Carg09615 vs. NCBI nr
Match: XP_023513557.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194.5 bits (493), Expect = 3.6e-46
Identity = 110/162 (67.90%), Postives = 114/162 (70.37%), Query Frame = 0


Query: 59  KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQFNPNXXXXXXXXXXXXXXXSAPLM 118
           KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQ N N               S  L+
Sbjct: 29  KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQLNLN---DQPSFSSSSNLLSPALI 88

Query: 119 AKLHKCHLASLQIAKKHTAHKQHPGFEPNYAVYGGPSPSISQTTTHRWRQEET------- 178
           AKLHKCHLASLQIAKKH  HKQHPGF+PN    GGP PSIS+TTT  W  EET       
Sbjct: 89  AKLHKCHLASLQIAKKH-IHKQHPGFDPN----GGPPPSISRTTTGPWPPEETWVYSDEA 148

Query: 179 QIETXXXXXXXHHQQCLQPLEDDDIEQMIQELLDLGSFEIIT 214
           Q+E        H QQCLQPLEDD IEQMIQELLDLG FEIIT
Sbjct: 149 QMEINNNDNNIHRQQCLQPLEDDHIEQMIQELLDLGPFEIIT 182

[Close]

BLAST of Carg09615 vs. NCBI nr
Match: XP_023004394.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita maxima])

HSP 1 Score: 193.7 bits (491), Expect = 6.2e-46
Identity = 108/159 (67.92%), Postives = 114/159 (71.70%), Query Frame = 0


Query: 59  KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQFNPNXXXXXXXXXXXXXXXSAPLM 118
           KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQ N N               S  L+
Sbjct: 29  KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQLNLN---DQPSFSSSSNLLSPALI 88

Query: 119 AKLHKCHLASLQIAKKHTAHKQHPGFEPNYAVYGGPSPSISQTTTHRWRQEETQIET--- 178
           AKLHKCHLASLQIAKKH  HKQHPGF+PN    GGP PSIS+TTT +W  EET + +   
Sbjct: 89  AKLHKCHLASLQIAKKH-IHKQHPGFDPN----GGPPPSISRTTTGQWPPEETWVYSDEA 148

Query: 179 -XXXXXXXHHQQCLQPLEDDDIEQMIQELLDLGSFEIIT 214
                   HHQ CLQPLEDD IEQMIQELLDLG FEIIT
Sbjct: 149 QMKINNNIHHQPCLQPLEDDHIEQMIQELLDLGPFEIIT 179

[Close]

BLAST of Carg09615 vs. TAIR10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 115.5 bits (288), Expect = 3.9e-26
Identity = 71/153 (46.41%), Postives = 84/153 (54.90%), Query Frame = 0


Query: 59  KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQFNPNXXXXXXXXXXXXXXXSAPLM 118
           KTRIWLGTFETAEDAARAYDEAARLMCGP+ARTNF +NPN               SA L 
Sbjct: 29  KTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYNPN-----AIPTSSSKLLSATLT 88

Query: 119 AKLHKCHLASLQIAKKHTAHKQHPGFEPNYAVYGGPSPSISQTTTHRWRQEETQIETXXX 178
           AKLHKC++ASLQ+ K                        ++   +H  R      E    
Sbjct: 89  AKLHKCYMASLQMTK----XXXXXXXXXXXXXXXXXXXXVTANESHLNRGVTETTEIKWE 148

Query: 179 XXXXHHQQCLQPLEDDDIEQMIQELLDLGSFEI 212
               + QQ  +PLE+D IEQMI+ELL  GS E+
Sbjct: 149 DGNANMQQNFRPLEEDHIEQMIEELLHYGSIEL 172

[Close]

BLAST of Carg09615 vs. TAIR10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 63.2 bits (152), Expect = 2.3e-10
Identity = 30/40 (75.00%), Postives = 32/40 (80.00%), Query Frame = 0


Query: 59 KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQFNPN 99
          K RIWLGTFETAE+AARAYDEAA LM G  A+TNF  N N
Sbjct: 28 KRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPLNNN 67

[Close]

BLAST of Carg09615 vs. TAIR10
Match: AT1G50640.1 (ethylene responsive element binding factor 3)

HSP 1 Score: 58.9 bits (141), Expect = 4.3e-09
Identity = 25/35 (71.43%), Postives = 31/35 (88.57%), Query Frame = 0


Query: 59 KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNF 94
          K R+WLGTF++AE+AARAYD AAR + GPKA+TNF
Sbjct: 49 KARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNF 83

[Close]

BLAST of Carg09615 vs. TAIR10
Match: AT3G20310.1 (ethylene response factor 7)

HSP 1 Score: 58.5 bits (140), Expect = 5.7e-09
Identity = 26/37 (70.27%), Postives = 32/37 (86.49%), Query Frame = 0


Query: 57 LGKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNF 94
          L K+R+WLGTF++A DAARAYD AAR + GPKA+TNF
Sbjct: 46 LKKSRVWLGTFDSAVDAARAYDTAARNLRGPKAKTNF 82

[Close]

BLAST of Carg09615 vs. TAIR10
Match: AT5G44210.1 (erf domain protein 9)

HSP 1 Score: 58.2 bits (139), Expect = 7.4e-09
Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 0


Query: 59 KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNF 94
          KTR+WLGTF+TAE+AARAYD AAR   G KA+TNF
Sbjct: 54 KTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

[Close]

BLAST of Carg09615 vs. Swiss-Prot
Match: sp|Q94AW5|ERF03_ARATH (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.0e-25
Identity = 71/153 (46.41%), Postives = 84/153 (54.90%), Query Frame = 0


Query: 59  KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQFNPNXXXXXXXXXXXXXXXSAPLM 118
           KTRIWLGTFETAEDAARAYDEAARLMCGP+ARTNF +NPN               SA L 
Sbjct: 29  KTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYNPN-----AIPTSSSKLLSATLT 88

Query: 119 AKLHKCHLASLQIAKKHTAHKQHPGFEPNYAVYGGPSPSISQTTTHRWRQEETQIETXXX 178
           AKLHKC++ASLQ+ K                        ++   +H  R      E    
Sbjct: 89  AKLHKCYMASLQMTK----XXXXXXXXXXXXXXXXXXXXVTANESHLNRGVTETTEIKWE 148

Query: 179 XXXXHHQQCLQPLEDDDIEQMIQELLDLGSFEI 212
               + QQ  +PLE+D IEQMI+ELL  GS E+
Sbjct: 149 DGNANMQQNFRPLEEDHIEQMIEELLHYGSIEL 172

[Close]

BLAST of Carg09615 vs. Swiss-Prot
Match: sp|P16146|PZ02_LUPPO (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.4e-19
Identity = 61/142 (42.96%), Postives = 80/142 (56.34%), Query Frame = 0


Query: 59  KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQFNPNXXXXXXXXXXXXXXXSAPLM 118
           KTRIW GTFE+AEDAARAYDEAARLMCG +ARTNF +NPN               SA L+
Sbjct: 29  KTRIWQGTFESAEDAARAYDEAARLMCGTRARTNFPYNPN-----ASQSSSSKLLSATLI 88

Query: 119 AKLHKCHLASLQIAKKHTAHKQHPGF--EPNYAVYGGPSPSISQTTTHRWRQEETQIETX 178
           AKLH+C++ASLQ+ +  ++  + P     PN AV G  + ++         ++ET     
Sbjct: 89  AKLHRCYMASLQMTRP-SSLPEAPRIIASPNNAVKGIGADAMLLPKKREQEEQETGGNLD 148

Query: 179 XXXXXXHHQQCLQPLEDDDIEQ 199
                    Q  +PLE+D I Q
Sbjct: 149 FKKVKVECSQQFKPLEEDHIAQ 164

[Close]

BLAST of Carg09615 vs. Swiss-Prot
Match: sp|Q9XI33|WIN1_ARATH (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.1e-09
Identity = 30/40 (75.00%), Postives = 32/40 (80.00%), Query Frame = 0


Query: 59 KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQFNPN 99
          K RIWLGTFETAE+AARAYDEAA LM G  A+TNF  N N
Sbjct: 28 KRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPLNNN 67

[Close]

BLAST of Carg09615 vs. Swiss-Prot
Match: sp|Q9SXS8|ERF3_TOBAC (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.4e-09
Identity = 27/35 (77.14%), Postives = 32/35 (91.43%), Query Frame = 0


Query: 59 KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNF 94
          KTR+WLGTF++AEDAARAYD AAR + GPKA+TNF
Sbjct: 49 KTRVWLGTFDSAEDAARAYDAAARALRGPKAKTNF 83

[Close]

BLAST of Carg09615 vs. Swiss-Prot
Match: sp|O80339|ERF82_ARATH (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=ERF3 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 7.8e-08
Identity = 25/35 (71.43%), Postives = 31/35 (88.57%), Query Frame = 0


Query: 59 KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNF 94
          K R+WLGTF++AE+AARAYD AAR + GPKA+TNF
Sbjct: 49 KARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNF 83

[Close]

BLAST of Carg09615 vs. TrEMBL
Match: tr|A0A0A0KA12|A0A0A0KA12_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432080 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 4.0e-41
Identity = 111/169 (65.68%), Postives = 121/169 (71.60%), Query Frame = 0


Query: 59  KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQFNPNXXXXXXXXXXXXXXXSAPLM 118
           KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNF +NPN   XXXXXXXXXXXXSA L+
Sbjct: 29  KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPYNPNDQQXXXXXXXXXXXXSAALI 88

Query: 119 AKLHKCHLASLQIAKKHTAHKQHPGFEPNYAVY-GGPSPSISQTTTHRWRQEETQIETXX 178
            KLHKCHLASLQIAK+H  HKQH GFEP+Y  Y G P P I+  TT +W  +ET + +  
Sbjct: 89  EKLHKCHLASLQIAKQH-VHKQHAGFEPSYLAYSGSPPPIITGATTSQWASDETWVYSNK 148

Query: 179 XXXXXHHQQC-------------LQPLEDDDIEQMIQELLDLGSFEIIT 214
                                  L+PLEDD IEQMIQELLDLGSFEIIT
Sbjct: 149 GDQMEXXXXXXXXXXXXXXXXCQLEPLEDDHIEQMIQELLDLGSFEIIT 196

[Close]

BLAST of Carg09615 vs. TrEMBL
Match: tr|A0A1S3CE50|A0A1S3CE50_CUCME (ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=LOC103499832 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.3e-39
Identity = 124/175 (70.86%), Postives = 132/175 (75.43%), Query Frame = 0


Query: 59  KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQFNPN--XXXXXXXXXXXXXXXSAP 118
           KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNF +N N  XXXXXXXXXXXXXXX   
Sbjct: 29  KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPYNLNDXXXXXXXXXXXXXXXXXXX 88

Query: 119 LMAKLHKCHLASLQIAKKHTAHKQHPGFEPNYAVYGG-PSPSISQTTTHRWRQEET---- 178
           L+ KLHKCHLASLQIAK+H  HKQHPGFEP+Y  YGG P PSI+  TT RW  +ET    
Sbjct: 89  LIEKLHKCHLASLQIAKQH-VHKQHPGFEPSYLAYGGSPPPSITGATTSRWTSDETWVYS 148

Query: 179 ---QIETXXXXXXXHHQQC----------LQPLEDDDIEQMIQELLDLGSFEIIT 214
              Q+E XXXXXXX               L+PLEDD IEQMIQELLDLGSFEIIT
Sbjct: 149 DKGQLEMXXXXXXXXXXXXXXXXXXXXCQLEPLEDDHIEQMIQELLDLGSFEIIT 202

[Close]

BLAST of Carg09615 vs. TrEMBL
Match: tr|A0A0B2QLQ0|A0A0B2QLQ0_GLYSO (Ethylene-responsive transcription factor ERF003 OS=Glycine soja OX=3848 GN=glysoja_024919 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.7e-28
Identity = 87/160 (54.37%), Postives = 97/160 (60.62%), Query Frame = 0


Query: 59  KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQFNPNXXXXXXXXXXXXXXXSAPLM 118
           KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNF +NPN               SA L 
Sbjct: 29  KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPYNPN-----EPQSSSSKLLSATLT 88

Query: 119 AKLHKCHLA--SLQIAKKHTAHKQHPGFEPNYAVYGGPSPSI----SQTTTHRWRQEETQ 178
           AKLHKCH+A  SLQ++K+  + K     EP+         SI    S  T  RW +EE Q
Sbjct: 89  AKLHKCHMASLSLQMSKQKQSQK-----EPHQGSSNDSGNSIAGTSSDNTQFRWPEEEGQ 148

Query: 179 IETXXXXXXXHHQQCLQP-LEDDDIEQMIQELLDLGSFEI 212
           +E          QQ  QP L+DD IEQMIQELLD GS EI
Sbjct: 149 VE------LLEQQQQFQPVLQDDHIEQMIQELLDYGSMEI 172

[Close]

BLAST of Carg09615 vs. TrEMBL
Match: tr|I1MCB7|I1MCB7_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100805499 PE=4 SV=2)

HSP 1 Score: 134.4 bits (337), Expect = 3.0e-28
Identity = 85/158 (53.80%), Postives = 92/158 (58.23%), Query Frame = 0


Query: 59  KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQFNPNXXXXXXXXXXXXXXXSAPLM 118
           KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNF +NPN               SA L 
Sbjct: 29  KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPYNPN-----EPQSSSSKLLSATLT 88

Query: 119 AKLHKCHLASLQIAKKHTAHKQHPGFEPNYAVYGGPSPSI----SQTTTHRWRQEETQIE 178
           AKLHKCH+ASL +        Q    EP+         SI    S  T  RW +EE Q+E
Sbjct: 89  AKLHKCHMASLSLQMSKQKQSQ---TEPHQGSSNDSGNSIAGTSSDNTQFRWPEEEGQVE 148

Query: 179 TXXXXXXXHHQQCLQP-LEDDDIEQMIQELLDLGSFEI 212
                     QQ  QP L+DD IEQMIQELLD GS EI
Sbjct: 149 ------LLEQQQQFQPVLQDDHIEQMIQELLDYGSMEI 172

[Close]

BLAST of Carg09615 vs. TrEMBL
Match: tr|A0A2P5WZ68|A0A2P5WZ68_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA24288 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.9e-28
Identity = 83/163 (50.92%), Postives = 96/163 (58.90%), Query Frame = 0


Query: 59  KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQFNPNXXXXXXXXXXXXXXXSAPLM 118
           KTRIWLGTFETAEDAARAYDEAARLMCG K RTNF +NPN               SA L 
Sbjct: 29  KTRIWLGTFETAEDAARAYDEAARLMCGAKTRTNFPYNPN-----DSQSASSKLLSATLA 88

Query: 119 AKLHKCHLASLQIAKKHTAHKQ------HPGFEPNYAVYG---GPSPSISQTTTHRW-RQ 178
           AKLHKCH+A+LQ+AKK+ A         HP   P+Y V G   G +         +W   
Sbjct: 89  AKLHKCHMAALQLAKKNAAKDPYATQCGHPSAAPSYTVTGSNIGETDCRQHIPGKKWDGY 148

Query: 179 EETQIETXXXXXXXHHQQCLQPLEDDDIEQMIQELLDLGSFEI 212
           EE+Q+E          +Q   PLEDD IEQMI+ELLD GS E+
Sbjct: 149 EESQVE---------GEQQFVPLEDDHIEQMIEELLDYGSIEL 177

The following BLAST results are available for this feature:

BLAST of Carg09615 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954016.1	5.8e-68	99.35	ethylene-responsive transcription factor ERF003-like [Cucurbita moschata]	[more]
XP_023547696.1	1.0e-56	89.03	ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo...	[more]
XP_022991609.1	1.3e-46	81.94	ethylene-responsive transcription factor ERF003-like [Cucurbita maxima]	[more]
XP_023513557.1	3.6e-46	67.90	ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo...	[more]
XP_023004394.1	6.2e-46	67.92	ethylene-responsive transcription factor ERF003-like [Cucurbita maxima]	[more]

BLAST of Carg09615 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G25190.1	3.9e-26	46.41	Integrase-type DNA-binding superfamily protein	[more]
AT1G15360.1	2.3e-10	75.00	Integrase-type DNA-binding superfamily protein	[more]
AT1G50640.1	4.3e-09	71.43	ethylene responsive element binding factor 3	[more]
AT3G20310.1	5.7e-09	70.27	ethylene response factor 7	[more]
AT5G44210.1	7.4e-09	74.29	erf domain protein 9	[more]

BLAST of Carg09615 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94AW5\|ERF03_ARATH	7.0e-25	46.41	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|P16146\|PZ02_LUPPO	4.4e-19	42.96	Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1	[more]
sp\|Q9XI33\|WIN1_ARATH	4.1e-09	75.00	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|Q9SXS8\|ERF3_TOBAC	5.4e-09	77.14	Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 ...	[more]
sp\|O80339\|ERF82_ARATH	7.8e-08	71.43	Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]

BLAST of Carg09615 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KA12\|A0A0A0KA12_CUCSA	4.0e-41	65.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432080 PE=4 SV=1	[more]
tr\|A0A1S3CE50\|A0A1S3CE50_CUCME	1.3e-39	70.86	ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=...	[more]
tr\|A0A0B2QLQ0\|A0A0B2QLQ0_GLYSO	1.7e-28	54.38	Ethylene-responsive transcription factor ERF003 OS=Glycine soja OX=3848 GN=glyso...	[more]
tr\|I1MCB7\|I1MCB7_SOYBN	3.0e-28	53.80	Uncharacterized protein OS=Glycine max OX=3847 GN=100805499 PE=4 SV=2	[more]
tr\|A0A2P5WZ68\|A0A2P5WZ68_GOSBA	3.9e-28	50.92	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA24288 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR016177	DNA-bd_dom_sf
IPR036955	AP2/ERF_dom_sf
IPR001471	AP2/ERF_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09615-RA	Carg09615-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 14..100 e-value: 6.6E-15 score: 65.5
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 59..86 e-value: 1.0E-4 score: 22.4
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 30..94 score: 11.192
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 58..94 e-value: 1.94948E-18 score: 75.3859
IPR036955	AP2/ERF domain superfamily	GENE3D	G3DSA:3.30.730.10		coord: 45..96 e-value: 6.1E-16 score: 60.0
None	No IPR available	PANTHER	PTHR31194:SF4	SUBFAMILY NOT NAMED	coord: 57..211
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 57..211
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	SSF54171	DNA-binding domain	coord: 57..95

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg09615	Cla015332	Watermelon (97103) v1	carwmB1028
Carg09615	Csa7G432080	Cucumber (Chinese Long) v2	carcuB1041
Carg09615	MELO3C023458	Melon (DHL92) v3.5.1	carmeB0996
Carg09615	ClCG09G003240	Watermelon (Charleston Gray)	carwcgB1001
Carg09615	CSPI07G20200	Wild cucumber (PI 183967)	carcpiB1064
Carg09615	Cucsa.105830	Cucumber (Gy14) v1	carcgyB1144
Carg09615	CmaCh08G005960	Cucurbita maxima (Rimu)	carcmaB1425
Carg09615	CmaCh17G008890	Cucurbita maxima (Rimu)	carcmaB1419
Carg09615	CmoCh08G005880	Cucurbita moschata (Rifu)	carcmoB1379
Carg09615	CmoCh17G008580	Cucurbita moschata (Rifu)	carcmoB1376
Carg09615	Lsi02G026750	Bottle gourd (USVL1VR-Ls)	carlsiB937
Carg09615	Cp4.1LG12g07360	Cucurbita pepo (Zucchini)	carcpeB1424
Carg09615	Cp4.1LG17g08820	Cucurbita pepo (Zucchini)	carcpeB1425
Carg09615	CsGy7G018470	Cucumber (Gy14) v2	carcgybB1011
Carg09615	MELO3C023458.2	Melon (DHL92) v3.6.1	carmedB1008
Carg09615	CsaV3_7G031980	Cucumber (Chinese Long) v3	carcucB1074
Carg09615	Cla97C09G165470	Watermelon (97103) v2	carwmbB1089

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None