Cucsa.105290 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.105290
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionDNA replication complex GINS protein PSF1
Locationscaffold00929 : 37364 .. 39550 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAATTGCAGAACTTCGTTCCTCCACTACTTCATGCTCTGAAGTTTTTCCATAGGTACTTTCAATTTGCAGTTTTAACCCTATTGATTCTTTTTCTCCACCATCTATCTCTGGTTTAGATTTCGTTTGCGTAATTTCTTTCCAGCAGGACTCGATCTTTGTGTATTTTGCATTGTAATAACGATTTGGAACGATCATTTTTCTTCAGGGAGGTGAAATTTGAATATGTATGGAAGAAAAGCATGCCAATTGGTGAAAGAGTTAGCAAGCGGCGAGAAAGGACAGCTAACACACTTCAATGTGAGTTTACTTGTTTCATTGTTGCTTATATGTATAAACTGAGGTTGTGACCATCTGTTGTTGTTCTTGAGTTGAAATTAATCAAAATTCTGGACAGGGAATCAAAAAATTTTAAGTTCATGAAATGGGTATTTGTGGATTGACTTTCTAAGTGCTTAAAAACGTTTTTTTTTCAAGTCCAAATATATTTTGCTTGTTTTCACTACTGCAGGAGCATTGTCGACCTATTCATGTTTTCTTGCGTGTGTGTACAATGAACTGTACCATTTTTGTTCAGTTTTTAAATATTCTCTTTTATTGGAAGTACATGGCTTTAAAAGGAATTATGGTTGCCTCTGGTCACGGTAATTCGTCTGTCTCTCAAATCACCTTGTTCATTGTCCTTGTGTCAAGCGATACAATATGTTTTTCTTAGCCTCTTCTTTCCATCTATCTTTAGAAAATTTATATTATATCTAAAATTTTCCACCTTTGTTTTCCTGTTTTTTCAGAGCGACCTATTTGAACAGGTTATTTCAGAATGCCAGCAGCATCATCTTGAGCTTCAGTCCTTGATTAGGTTAAAGATTTTACATTTTTTATTCACATGTTTCACTAATTGATACGATATATAGTTTTGACTGTTAGTAGCAGGTTATCTTAATACTTGTTATTAAACTTTCCTTATCCTATGGACAAGTGTCCTTGGTTGAGGCTAACTATAAGACACGATCTTTATGGAATTTTGTCCTTTCAATAAGTTTATGGTTTGAGAAATCTTCATCTATTTCCCAATGAAATTCAATATGGCCGATCGCCAATATGATAATCTAAAACAGGAAAGTACAGGAAGAAGGATTAGATCTTCAGACAACTAAGAATGAAGACCATTTTGGCGCGCTCATTCATCACCTTGCATTAGTTCGCAACAAACGTTGCCTTATGGCTTATGTGTAAGTGTAACATTATGAGATAAATTTGAAGAACAGTGTTTTTCTTGGTTTGCTAAGTTTTAGTAAATTCCATAATTGTTTGCCAAATAAATGCCACTGTACATGAATACACAGGCATAATCGAGCTGAGATTATAAGAAGTTTGATGTGGAAGGTAGTAGGTTCTATGATTCCACCGGAAATACAAGAGAAGCTCAGCAACTCAGAGGAAGAGTATTTCAAGAAGCATTCTGCCCGTCTTAAAGAATATATGTCAAAACTGGAGTTGGATTTGACTGTGGTAATTTCGAACACCAAACACCAAACTTTACAATAACACATCCTTTTTTACATTTGCAACTCAAATTCCTCAGACTGAAATTTCCAAGTTTATCATTGGCAGGATATGGTGCCACCTAAGGATCCTTATATCCAAGTGAGAGTGCTCGACGATATCGGTGAAGGAATCGTTTTGAGTGATGATAAAACAGCAAACTTTGCACTTCATTCCATACATTTTCTTAAAAGAACTGATGCTGAACAATACATCTCACGGGTGGGAATCTCTGTGAACTTTGGTAGTTCTTGGTATTGCTTGCTTAAATAAATGTGTACTAAACTTGTAATCTTTCGAAAACAGGGATTGATGGAGGAGCTTACAGGCTGACTGATCCACTGGAGTTAGAGTTTAGTTGGAGATGTTTGTTGTAAATTAAGAAGCAAATGAGATAAGAGGCGAAACAAAGGGTGATCCATCCCATTTCTGTAATTATACATAGAGATAATTGATTGTCAATCAAACTTATTTTAGTGGGTTCTTTTTTTCATTTAATTTTATTTGATAATATAAACTTTATGAACTATGGTCCTGTGGTTTGTTTGTAAACCATATTCATAATCAGTCAAATAAGAGACTTTTTTAGAAACTCTGATATTAATTTAGTTAATCAATTTATAAGATATTTTTGTACGTATGA

mRNA sequence

CTAATTGCAGAACTTCGTTCCTCCACTACTTCATGCTCTGAAGTTTTTCCATAGGGAGGTGAAATTTGAATATGTATGGAAGAAAAGCATGCCAATTGGTGAAAGAGTTAGCAAGCGGCGAGAAAGGACAGCTAACACACTTCAATAGCGACCTATTTGAACAGGTTATTTCAGAATGCCAGCAGCATCATCTTGAGCTTCAGTCCTTGATTAGGAAAGTACAGGAAGAAGGATTAGATCTTCAGACAACTAAGAATGAAGACCATTTTGGCGCGCTCATTCATCACCTTGCATTAGTTCGCAACAAACGTTGCCTTATGGCTTATGTGCATAATCGAGCTGAGATTATAAGAAGTTTGATGTGGAAGGTAGTAGGTTCTATGATTCCACCGGAAATACAAGAGAAGCTCAGCAACTCAGAGGAAGAGTATTTCAAGAAGCATTCTGCCCGTCTTAAAGAATATATGTCAAAACTGGAGTTGGATTTGACTGTGGATATGGTGCCACCTAAGGATCCTTATATCCAAGTGAGAGTGCTCGACGATATCGGTGAAGGAATCGTTTTGAGTGATGATAAAACAGCAAACTTTGCACTTCATTCCATACATTTTCTTAAAAGAACTGATGCTGAACAATACATCTCACGGGGATTGATGGAGGAGCTTACAGGCTGACTGATCCACTGGAGTTAGAGTTTAGTTGGAGATGTTTGTTGTAAATTAAGAAGCAAATGAGATAAGAGGCGAAACAAAGGGTGATCCATCCCATTTCTGTAATTATACATAGAGATAATTGATTGTCAATCAAACTTATTTTAGTGGGTTCTTTTTTTCATTTAATTTTATTTGATAATATAAACTTTATGAACTATGGTCCTGTGGTTTGTTTGTAAACCATATTCATAATCAGTCAAATAAGAGACTTTTTTAGAAACTCTGATATTAATTTAGTTAATCAATTTATAAGATATTTTTGTACGTATGA

Coding sequence (CDS)

ATGTATGGAAGAAAAGCATGCCAATTGGTGAAAGAGTTAGCAAGCGGCGAGAAAGGACAGCTAACACACTTCAATAGCGACCTATTTGAACAGGTTATTTCAGAATGCCAGCAGCATCATCTTGAGCTTCAGTCCTTGATTAGGAAAGTACAGGAAGAAGGATTAGATCTTCAGACAACTAAGAATGAAGACCATTTTGGCGCGCTCATTCATCACCTTGCATTAGTTCGCAACAAACGTTGCCTTATGGCTTATGTGCATAATCGAGCTGAGATTATAAGAAGTTTGATGTGGAAGGTAGTAGGTTCTATGATTCCACCGGAAATACAAGAGAAGCTCAGCAACTCAGAGGAAGAGTATTTCAAGAAGCATTCTGCCCGTCTTAAAGAATATATGTCAAAACTGGAGTTGGATTTGACTGTGGATATGGTGCCACCTAAGGATCCTTATATCCAAGTGAGAGTGCTCGACGATATCGGTGAAGGAATCGTTTTGAGTGATGATAAAACAGCAAACTTTGCACTTCATTCCATACATTTTCTTAAAAGAACTGATGCTGAACAATACATCTCACGGGGATTGATGGAGGAGCTTACAGGCTGA

Protein sequence

MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTTKNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG*
Homology
[Close]
BLAST of Cucsa.105290 vs. Swiss-Prot
Match: PSF1_DICDI (Probable DNA replication complex GINS protein PSF1 OS=Dictyostelium discoideum GN=gins1 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.7e-25
Identity = 66/200 (33.00%), Postives = 115/200 (57.50%), Query Frame = 1 

Query: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60
           M+ + A +L+KEL   +   + H+N    +  I E    + +L   I + +E+       
Sbjct: 1   MFTKTAIELIKELRGTDS--IPHYNDTSIKATIDEMIALYEDLIKTITEHKEQ------- 60

Query: 61  KNEDHF--GALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEE 120
           K E  +   A+  H ++ R+KRC++AY++ R   I+   W    S++P +++E+LS +E 
Sbjct: 61  KKEPFYLQHAITFHNSINRDKRCILAYLNERLNRIKEYRWSSGQSLLPDQLKERLSQNEI 120

Query: 121 EYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSI 180
           ++F ++   L EY SK+ LDLT+D  PPK+ YI+VRV+ ++GE +VL+   T N  L++ 
Sbjct: 121 QFFSEYDKILTEYNSKVGLDLTIDPQPPKELYIEVRVIKELGE-VVLNSGCTVNLNLNTT 180

Query: 181 HFLKRTDAEQYISRGLMEEL 199
           HFLKR+D    +  G +E +
Sbjct: 181 HFLKRSDITNLVKNGSLEHI 190

[Close]
BLAST of Cucsa.105290 vs. Swiss-Prot
Match: PSF1_MOUSE (DNA replication complex GINS protein PSF1 OS=Mus musculus GN=Gins1 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.1e-23
Identity = 73/203 (35.96%), Postives = 109/203 (53.69%), Query Frame = 1 

Query: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGL-DLQT 60
           M+  KA +LV+EL    +GQL  FN D   QV+ E +  + + QS + + +  G  DL  
Sbjct: 1   MFCEKAMELVRELHRAPEGQLPAFNEDGLRQVLEEMKALYEQNQSDVNEAKSAGRGDLIP 60

Query: 61  TKNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEE 120
           T           H AL+RN+RC +AY+++R   IR+L W+  GS++P  ++  +S  E E
Sbjct: 61  TVK-------FRHCALLRNRRCTIAYLYDRLLRIRALRWE-YGSVLPNSLRFHMSAEETE 120

Query: 121 YFKKHSARLKEYMSKL----ELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFAL 180
           +F  +   L  YM  L     LD+T D+ PPK  YI+VR L D GE   + D  +     
Sbjct: 121 WFNHYKKSLATYMRSLGGDEGLDITQDVKPPKSLYIEVRCLKDYGE-FEVDDGTSVLLKK 180

Query: 181 HSIHFLKRTDAEQYISRGLMEEL 199
           +S HFL R   EQ I +G++E +
Sbjct: 181 NSQHFLPRWKCEQLIRQGVLEHV 194

[Close]
BLAST of Cucsa.105290 vs. Swiss-Prot
Match: PSF1_BOVIN (DNA replication complex GINS protein PSF1 OS=Bos taurus GN=GINS1 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 6.1e-23
Identity = 71/203 (34.98%), Postives = 110/203 (54.19%), Query Frame = 1 

Query: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGL-DLQT 60
           M+  KA +LV+EL    +G+L  FN D   QV+ E +  + + QS + + +  G  DL  
Sbjct: 1   MFCEKAMELVRELHRAAEGRLPAFNEDGLRQVLEEMKALYEQNQSDVNEAKSSGRGDLIP 60

Query: 61  TKNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEE 120
           T           H +L+RN+RC +AY+++R   IR+L W+  GS++P  ++  +S  E +
Sbjct: 61  TIK-------FRHCSLLRNQRCTVAYLYDRLLRIRALRWEY-GSVLPSALRFHMSAEEMD 120

Query: 121 YFKKHSARLKEYMSKLE----LDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFAL 180
           +F ++   L  YM  L     LD+T DM PPK  YI+VR L D GE   + D  +     
Sbjct: 121 WFNRYKKSLATYMRSLGGDEGLDITQDMKPPKSLYIEVRCLKDYGE-FEVEDGTSVLLKK 180

Query: 181 HSIHFLKRTDAEQYISRGLMEEL 199
           +S HFL R   EQ I +G++E +
Sbjct: 181 NSQHFLPRWKCEQLIRQGILEHV 194

[Close]
BLAST of Cucsa.105290 vs. Swiss-Prot
Match: PSF1_HUMAN (DNA replication complex GINS protein PSF1 OS=Homo sapiens GN=GINS1 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 8.0e-23
Identity = 70/204 (34.31%), Postives = 109/204 (53.43%), Query Frame = 1 

Query: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLD--LQ 60
           M+  KA +L++EL    +GQL  FN D   QV+ E +  + + QS + + +  G    + 
Sbjct: 1   MFCEKAMELIRELHRAPEGQLPAFNEDGLRQVLEEMKALYEQNQSDVNEAKSGGRSDLIP 60

Query: 61  TTKNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEE 120
           T K          H +L+RN+RC +AY+++R   IR+L W+  GS++P  ++  ++  E 
Sbjct: 61  TIK--------FRHCSLLRNRRCTVAYLYDRLLRIRALRWEY-GSVLPNALRFHMAAEEM 120

Query: 121 EYFKKHSARLKEYMSKLE----LDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFA 180
           E+F  +   L  YM  L     LD+T DM PPK  YI+VR L D GE   + D  +    
Sbjct: 121 EWFNNYKRSLATYMRSLGGDEGLDITQDMKPPKSLYIEVRCLKDYGE-FEVDDGTSVLLK 180

Query: 181 LHSIHFLKRTDAEQYISRGLMEEL 199
            +S HFL R   EQ I +G++E +
Sbjct: 181 KNSQHFLPRWKCEQLIRQGVLEHI 194

[Close]
BLAST of Cucsa.105290 vs. Swiss-Prot
Match: PSF1_CAEEL (Probable DNA replication complex GINS protein PSF1 OS=Caenorhabditis elegans GN=psf-1 PE=3 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 1.9e-16
Identity = 59/195 (30.26%), Postives = 99/195 (50.77%), Query Frame = 1 

Query: 5   KACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTTKNED 64
           KA QLV E+       L  +N++L  Q   +  +   +  +++ K++  GL   +T  + 
Sbjct: 14  KALQLVLEMKRNPD-VLPPYNTELVRQCYQKIDELFQKNAAVVEKIRA-GLPHDSTLLQP 73

Query: 65  HFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEEYFKKH 124
              A+ H       +RC+MAYV+ R   IRS  WK  G  +P  ++  L ++E ++F ++
Sbjct: 74  RLAAMCHI------RRCMMAYVNERKNRIRSFRWKY-GGALPASVRNALCDAEIQFFNEY 133

Query: 125 SARLKEYMSKLE---LDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHFL 184
           S+ L  + S L    ++L +   PPK  ++QVR L+D GE    SD      +  S+H L
Sbjct: 134 SSTLARFQSNLGEGGVNLLLHSAPPKSLFVQVRALEDYGE-FETSDGTQVQLSKDSLHSL 193

Query: 185 KRTDAEQYISRGLME 197
            R D E  I +G++E
Sbjct: 194 PRQDCEMLIRQGVLE 198

[Close]
BLAST of Cucsa.105290 vs. TrEMBL
Match: A0A0A0K8U8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G433190 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 5.1e-109
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1 

Query: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60
           MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT
Sbjct: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60

Query: 61  KNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEEY 120
           KNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEEY
Sbjct: 61  KNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEEY 120

Query: 121 FKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180
           FKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF
Sbjct: 121 FKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180

Query: 181 LKRTDAEQYISRGLMEELTG 201
           LKRTDAEQYISRGLMEELTG
Sbjct: 181 LKRTDAEQYISRGLMEELTG 200

[Close]
BLAST of Cucsa.105290 vs. TrEMBL
Match: V7BUE2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G004200g PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 4.2e-87
Identity = 156/200 (78.00%), Postives = 183/200 (91.50%), Query Frame = 1 

Query: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60
           MYGR ACQLVKE ASG+KGQL  FNSDLF+QV++EC QHHLELQSLIRK+QEEGLD+QT 
Sbjct: 1   MYGRTACQLVKEFASGDKGQLVSFNSDLFQQVVAECSQHHLELQSLIRKIQEEGLDIQTA 60

Query: 61  KNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEEY 120
           +N DH+GALIHHLALVRNKRCLMAYV+NRAEIIR+L+WK +G ++P EI+EKLS++EEE+
Sbjct: 61  RNADHYGALIHHLALVRNKRCLMAYVYNRAEIIRNLLWK-IGHVLPQEIEEKLSHAEEEH 120

Query: 121 FKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180
           F+KHS  LK YMSK+ +DLTVDMVPPKDPYI+VRVLDDIG+GI+LSDDKTANFA HS+H 
Sbjct: 121 FRKHSTALKSYMSKVMVDLTVDMVPPKDPYIKVRVLDDIGDGIMLSDDKTANFACHSMHL 180

Query: 181 LKRTDAEQYISRGLMEELTG 201
           LKRTDAEQ++SRG MEELTG
Sbjct: 181 LKRTDAEQFVSRGQMEELTG 199

[Close]
BLAST of Cucsa.105290 vs. TrEMBL
Match: V7BW96_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G019100g PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.3e-85
Identity = 154/200 (77.00%), Postives = 181/200 (90.50%), Query Frame = 1 

Query: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60
           MYGR ACQLVKE ASG++GQL  FNSDLF+QV++EC QHHLELQSLIRK+QEEGLD+QT 
Sbjct: 1   MYGRTACQLVKEFASGDEGQLVSFNSDLFQQVVAECSQHHLELQSLIRKIQEEGLDIQTA 60

Query: 61  KNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEEY 120
           +N DH+GALIHHLALVRNKRCLMAYV+NRAE IR+L+WK +G ++P EI+EKL ++EEE+
Sbjct: 61  RNADHYGALIHHLALVRNKRCLMAYVYNRAETIRNLVWK-IGHVLPQEIEEKLCHAEEEH 120

Query: 121 FKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180
           F+KHS  LK YMSK+ +DLTVDMVPPKDPYI+VRVLDDIG+GI+LSDDKTANFA HS+H 
Sbjct: 121 FRKHSTALKSYMSKVLVDLTVDMVPPKDPYIKVRVLDDIGDGILLSDDKTANFACHSMHL 180

Query: 181 LKRTDAEQYISRGLMEELTG 201
           LKRTDAEQ+ISRG MEELTG
Sbjct: 181 LKRTDAEQFISRGQMEELTG 199

[Close]
BLAST of Cucsa.105290 vs. TrEMBL
Match: A0A072VHS7_MEDTR (DNA replication complex GINS protein PSF1 OS=Medicago truncatula GN=MTR_1g052500 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 3.9e-85
Identity = 157/200 (78.50%), Postives = 178/200 (89.00%), Query Frame = 1 

Query: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60
           M+GRKACQLVKE ASGEKGQLT FN DLFEQV+ EC QHHL+LQSLIRK+QEEGLD+QT 
Sbjct: 1   MFGRKACQLVKEFASGEKGQLTPFNKDLFEQVVGECNQHHLDLQSLIRKMQEEGLDVQTA 60

Query: 61  KNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEEY 120
           +N DH+GALIH  ++VRNKRCLMAYV+NRAE IRSL+WK +G +IP EI+EKL + EEEY
Sbjct: 61  RNADHYGALIHLFSIVRNKRCLMAYVYNRAETIRSLLWK-IGPVIPKEIEEKLDHREEEY 120

Query: 121 FKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180
           FKKHS+ LK YMSK+ +DLTVDMVPPKDPYIQVRVL+DI EGIVLSDDK  NFA HS+HF
Sbjct: 121 FKKHSSALKSYMSKVFVDLTVDMVPPKDPYIQVRVLEDIREGIVLSDDKNPNFARHSMHF 180

Query: 181 LKRTDAEQYISRGLMEELTG 201
           LKRTDAE+YISRGLMEELTG
Sbjct: 181 LKRTDAEKYISRGLMEELTG 199

[Close]
BLAST of Cucsa.105290 vs. TrEMBL
Match: G7IYB5_MEDTR (DNA replication complex GINS protein PSF1 OS=Medicago truncatula GN=MTR_3g005080 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 4.3e-84
Identity = 155/200 (77.50%), Postives = 177/200 (88.50%), Query Frame = 1 

Query: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60
           M+GRKACQLVKE ASGEKGQLT FN DLFEQV+ EC QHHL+LQSLIRK+QEEGLD+QT 
Sbjct: 1   MFGRKACQLVKEFASGEKGQLTPFNKDLFEQVVGECSQHHLDLQSLIRKMQEEGLDVQTA 60

Query: 61  KNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEEY 120
           +N DH+GALIH  ++VRNKRCL AYV+NRAE IR+L+WK +G +IP EI+EKL + EEEY
Sbjct: 61  RNADHYGALIHLFSIVRNKRCLTAYVYNRAETIRNLLWK-IGPVIPKEIEEKLDHREEEY 120

Query: 121 FKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180
           FKKHS+ LK YMSK+ +DLTVDMVPPKDPYIQVRVL+DI EGIVLSDDK  NFA HS+HF
Sbjct: 121 FKKHSSALKSYMSKVFVDLTVDMVPPKDPYIQVRVLEDIREGIVLSDDKNPNFARHSMHF 180

Query: 181 LKRTDAEQYISRGLMEELTG 201
           LKRTDAE+YISRGLMEELTG
Sbjct: 181 LKRTDAEKYISRGLMEELTG 199

[Close]
BLAST of Cucsa.105290 vs. TAIR10
Match: AT1G80190.1 (AT1G80190.1 partner of SLD five 1)

HSP 1 Score: 281.2 bits (718), Expect = 5.1e-76
Identity = 138/202 (68.32%), Postives = 165/202 (81.68%), Query Frame = 1 

Query: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60
           MYGRK  QL+K+ A+GEKGQL  FNS LF++ I EC Q+H  +QSLIRK+Q+EGLD+Q  
Sbjct: 1   MYGRKGYQLIKDFATGEKGQLKPFNSKLFDETIEECDQNHHLIQSLIRKMQQEGLDVQNN 60

Query: 61  KNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSM--IPPEIQEKLSNSEE 120
           +N DH+GALIHHLAL+RNKRCLMAYV+NRAEI+R L W+V   +  +P EIQEKL+  E+
Sbjct: 61  RNADHYGALIHHLALIRNKRCLMAYVYNRAEIVRDLAWRVGLELLDLPSEIQEKLTTLEK 120

Query: 121 EYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSI 180
           EYFK HS  LK YM K+ ++L VDMVPPKDPYI+VR+LDDI EGIVLS DKT NFA HS+
Sbjct: 121 EYFKNHSVALKSYMGKVGIELNVDMVPPKDPYIKVRILDDIDEGIVLS-DKTTNFARHSM 180

Query: 181 HFLKRTDAEQYISRGLMEELTG 201
           HFLKRTDAE YI+RG MEELTG
Sbjct: 181 HFLKRTDAEPYIARGQMEELTG 201

[Close]
BLAST of Cucsa.105290 vs. NCBI nr
Match: gi|449436120|ref|XP_004135842.1| (PREDICTED: probable DNA replication complex GINS protein PSF1 [Cucumis sativus])

HSP 1 Score: 401.7 bits (1031), Expect = 7.3e-109
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1 

Query: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60
           MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT
Sbjct: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60

Query: 61  KNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEEY 120
           KNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEEY
Sbjct: 61  KNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEEY 120

Query: 121 FKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180
           FKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF
Sbjct: 121 FKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180

Query: 181 LKRTDAEQYISRGLMEELTG 201
           LKRTDAEQYISRGLMEELTG
Sbjct: 181 LKRTDAEQYISRGLMEELTG 200

[Close]
BLAST of Cucsa.105290 vs. NCBI nr
Match: gi|659122340|ref|XP_008461089.1| (PREDICTED: probable DNA replication complex GINS protein PSF1 [Cucumis melo])

HSP 1 Score: 391.3 bits (1004), Expect = 9.9e-106
Identity = 194/200 (97.00%), Postives = 197/200 (98.50%), Query Frame = 1 

Query: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60
           MYGRKACQLV ELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT
Sbjct: 1   MYGRKACQLVTELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60

Query: 61  KNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEEY 120
           KNEDHFGALIHHLALVRNKRCLMAYVHNRAE IRSL+WK++GSMIPPEIQEKLSNSEEEY
Sbjct: 61  KNEDHFGALIHHLALVRNKRCLMAYVHNRAETIRSLIWKLLGSMIPPEIQEKLSNSEEEY 120

Query: 121 FKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180
           FKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF
Sbjct: 121 FKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180

Query: 181 LKRTDAEQYISRGLMEELTG 201
           LKRTDAEQYISRGLMEEL G
Sbjct: 181 LKRTDAEQYISRGLMEELRG 200

[Close]
BLAST of Cucsa.105290 vs. NCBI nr
Match: gi|1009113000|ref|XP_015871190.1| (PREDICTED: DNA replication complex GINS protein PSF1 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 333.2 bits (853), Expect = 3.2e-88
Identity = 161/200 (80.50%), Postives = 185/200 (92.50%), Query Frame = 1 

Query: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60
           MYGRKACQLVKEL +GEKGQL  FNSDLF+QVI+EC QH+ E+QSL RK++EEGLD++TT
Sbjct: 1   MYGRKACQLVKELTTGEKGQLMPFNSDLFDQVIAECGQHYFEIQSLTRKMEEEGLDIETT 60

Query: 61  KNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEEY 120
           KNEDH+G+LIHHL+LVRNKRCLMAY++NRAEI+R+L WKV G ++P EIQEKLS+ EE+Y
Sbjct: 61  KNEDHYGSLIHHLSLVRNKRCLMAYLYNRAEILRNLTWKV-GPVLPQEIQEKLSHLEEDY 120

Query: 121 FKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180
           FKKHSA LK YMSKL+LDL VDMVPPKDPYIQVRVLDDIG+GIVLSDDKTANFA HS+HF
Sbjct: 121 FKKHSASLKSYMSKLDLDLAVDMVPPKDPYIQVRVLDDIGDGIVLSDDKTANFAPHSMHF 180

Query: 181 LKRTDAEQYISRGLMEELTG 201
           LKRTDAEQ+ISRGLMEELTG
Sbjct: 181 LKRTDAEQFISRGLMEELTG 199

[Close]
BLAST of Cucsa.105290 vs. NCBI nr
Match: gi|1021561272|ref|XP_016171876.1| (PREDICTED: probable DNA replication complex GINS protein PSF1 [Arachis ipaensis])

HSP 1 Score: 331.6 bits (849), Expect = 9.3e-88
Identity = 163/200 (81.50%), Postives = 186/200 (93.00%), Query Frame = 1 

Query: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60
           MYGRKAC+LVKE AS  KGQLT +NSDLFEQV++EC QHHLELQSLIRK+QEEGLD+QT 
Sbjct: 1   MYGRKACELVKEFASVGKGQLTQYNSDLFEQVVAECSQHHLELQSLIRKMQEEGLDVQTA 60

Query: 61  KNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEEY 120
           +N DH+GALIHHL+LVRNKRCLMAYV+NRAEIIRSL+WK +GS++P EI+EKLS++EEEY
Sbjct: 61  RNADHYGALIHHLSLVRNKRCLMAYVNNRAEIIRSLLWK-IGSVLPKEIEEKLSHTEEEY 120

Query: 121 FKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180
           F K+S  LK+YMSK+ELDLTVDMVPPKDPYI+VRVLDDIG+GIVLS DKTANFA HSIHF
Sbjct: 121 FNKYSGELKKYMSKMELDLTVDMVPPKDPYIKVRVLDDIGDGIVLS-DKTANFARHSIHF 180

Query: 181 LKRTDAEQYISRGLMEELTG 201
           LKRTDAEQ+ISRGLMEELTG
Sbjct: 181 LKRTDAEQFISRGLMEELTG 198

[Close]
BLAST of Cucsa.105290 vs. NCBI nr
Match: gi|1012224892|ref|XP_015936746.1| (PREDICTED: probable DNA replication complex GINS protein PSF1 [Arachis duranensis])

HSP 1 Score: 330.1 bits (845), Expect = 2.7e-87
Identity = 162/200 (81.00%), Postives = 185/200 (92.50%), Query Frame = 1 

Query: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60
           MYGRKAC+LVKE AS  KGQLT +NSDLFEQV++EC QHHLELQSLIRK+QEEGLD+QT 
Sbjct: 1   MYGRKACELVKEFASVGKGQLTQYNSDLFEQVVAECSQHHLELQSLIRKMQEEGLDVQTA 60

Query: 61  KNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEEY 120
           +N DH+GALIHHL+LVRNKRCLMAYV+NRAEIIRSL+WK +GS++P EI+EK S++EEEY
Sbjct: 61  RNADHYGALIHHLSLVRNKRCLMAYVNNRAEIIRSLLWK-IGSVLPKEIEEKFSHTEEEY 120

Query: 121 FKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180
           F K+S  LK+YMSK+ELDLTVDMVPPKDPYI+VRVLDDIG+GIVLS DKTANFA HSIHF
Sbjct: 121 FNKYSGELKKYMSKMELDLTVDMVPPKDPYIKVRVLDDIGDGIVLS-DKTANFARHSIHF 180

Query: 181 LKRTDAEQYISRGLMEELTG 201
           LKRTDAEQ+ISRGLMEELTG
Sbjct: 181 LKRTDAEQFISRGLMEELTG 198

The following BLAST results are available for this feature:
BLAST of Cucsa.105290 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PSF1_DICDI1.7e-2533.00Probable DNA replication complex GINS protein PSF1 OS=Dictyostelium discoideum G... [more]
PSF1_MOUSE2.1e-2335.96DNA replication complex GINS protein PSF1 OS=Mus musculus GN=Gins1 PE=1 SV=1[more]
PSF1_BOVIN6.1e-2334.98DNA replication complex GINS protein PSF1 OS=Bos taurus GN=GINS1 PE=2 SV=1[more]
PSF1_HUMAN8.0e-2334.31DNA replication complex GINS protein PSF1 OS=Homo sapiens GN=GINS1 PE=1 SV=1[more]
PSF1_CAEEL1.9e-1630.26Probable DNA replication complex GINS protein PSF1 OS=Caenorhabditis elegans GN=... [more]
BLAST of Cucsa.105290 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8U8_CUCSA5.1e-109100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G433190 PE=4 SV=1[more]
V7BUE2_PHAVU4.2e-8778.00Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G004200g PE=4 SV=1[more]
V7BW96_PHAVU2.3e-8577.00Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G019100g PE=4 SV=1[more]
A0A072VHS7_MEDTR3.9e-8578.50DNA replication complex GINS protein PSF1 OS=Medicago truncatula GN=MTR_1g052500... [more]
G7IYB5_MEDTR4.3e-8477.50DNA replication complex GINS protein PSF1 OS=Medicago truncatula GN=MTR_3g005080... [more]
BLAST of Cucsa.105290 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G80190.15.1e-7668.32 partner of SLD five 1[more]
BLAST of Cucsa.105290 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449436120|ref|XP_004135842.1|7.3e-109100.00PREDICTED: probable DNA replication complex GINS protein PSF1 [Cucumis sativus][more]
gi|659122340|ref|XP_008461089.1|9.9e-10697.00PREDICTED: probable DNA replication complex GINS protein PSF1 [Cucumis melo][more]
gi|1009113000|ref|XP_015871190.1|3.2e-8880.50PREDICTED: DNA replication complex GINS protein PSF1 isoform X1 [Ziziphus jujuba... [more]
gi|1021561272|ref|XP_016171876.1|9.3e-8881.50PREDICTED: probable DNA replication complex GINS protein PSF1 [Arachis ipaensis][more]
gi|1012224892|ref|XP_015936746.1|2.7e-8781.00PREDICTED: probable DNA replication complex GINS protein PSF1 [Arachis duranensi... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005339GINS_Psf1
IPR021151GINS_A
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006260 DNA replication
cellular_component GO:0005634 nucleus
cellular_component GO:0000811 GINS complex
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.105290.1Cucsa.105290.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005339GINS complex, subunit Psf1PANTHERPTHR12914PARTNER OF SLD5coord: 1..200
score: 1.7
IPR021151GINS complexPFAMPF05916Sld5coord: 49..117
score: 1.
NoneNo IPR availablePANTHERPTHR12914:SF2DNA REPLICATION COMPLEX GINS PROTEIN PSF1coord: 1..200
score: 1.7
NoneNo IPR availableunknownSSF158573GINS helical bundle-likecoord: 1..147
score: 6.28

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.105290Cla015381Watermelon (97103) v1cgywmB142
Cucsa.105290Csa7G433190Cucumber (Chinese Long) v2cgycuB126
Cucsa.105290MELO3C023404Melon (DHL92) v3.5.1cgymeB133
Cucsa.105290ClCG09G002750Watermelon (Charleston Gray)cgywcgB141
Cucsa.105290CSPI07G20770Wild cucumber (PI 183967)cgycpiB127
Cucsa.105290CmaCh08G006730Cucurbita maxima (Rimu)cgycmaB0240
Cucsa.105290CmoCh08G006380Cucurbita moschata (Rifu)cgycmoB0239
Cucsa.105290Lsi02G027260Bottle gourd (USVL1VR-Ls)cgylsiB133
Cucsa.105290Cp4.1LG17g05660Cucurbita pepo (Zucchini)cgycpeB0231
Cucsa.105290MELO3C023404.2Melon (DHL92) v3.6.1cgymedB133
Cucsa.105290CsaV3_7G032580Cucumber (Chinese Long) v3cgycucB131
Cucsa.105290Cla97C09G164900Watermelon (97103) v2cgywmbB141
Cucsa.105290Bhi09G000037Wax gourdcgywgoB162
Cucsa.105290Carg18825Silver-seed gourdcarcgyB0837
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.105290Watermelon (97103) v2cgywmbB137
Cucsa.105290Watermelon (97103) v2cgywmbB139
Cucsa.105290Watermelon (97103) v2cgywmbB140
Cucsa.105290Wax gourdcgywgoB160
Cucsa.105290Cucumber (Gy14) v1cgycgyB032
Cucsa.105290Cucumber (Gy14) v1cgycgyB053
Cucsa.105290Cucurbita maxima (Rimu)cgycmaB0236
Cucsa.105290Cucurbita maxima (Rimu)cgycmaB0237
Cucsa.105290Cucurbita maxima (Rimu)cgycmaB0238
Cucsa.105290Cucurbita maxima (Rimu)cgycmaB0239
Cucsa.105290Cucurbita moschata (Rifu)cgycmoB0234
Cucsa.105290Cucurbita moschata (Rifu)cgycmoB0235
Cucsa.105290Cucurbita moschata (Rifu)cgycmoB0236
Cucsa.105290Cucurbita moschata (Rifu)cgycmoB0237
Cucsa.105290Wild cucumber (PI 183967)cgycpiB124
Cucsa.105290Wild cucumber (PI 183967)cgycpiB125
Cucsa.105290Cucumber (Chinese Long) v2cgycuB123
Cucsa.105290Cucumber (Chinese Long) v2cgycuB124
Cucsa.105290Melon (DHL92) v3.5.1cgymeB135
Cucsa.105290Watermelon (Charleston Gray)cgywcgB145
Cucsa.105290Watermelon (Charleston Gray)cgywcgB142
Cucsa.105290Watermelon (Charleston Gray)cgywcgB144
Cucsa.105290Watermelon (97103) v1cgywmB143
Cucsa.105290Watermelon (97103) v1cgywmB145
Cucsa.105290Cucurbita pepo (Zucchini)cgycpeB0229
Cucsa.105290Cucurbita pepo (Zucchini)cgycpeB0230
Cucsa.105290Cucurbita pepo (Zucchini)cgycpeB0232
Cucsa.105290Cucurbita pepo (Zucchini)cgycpeB0233
Cucsa.105290Bottle gourd (USVL1VR-Ls)cgylsiB132
Cucsa.105290Bottle gourd (USVL1VR-Ls)cgylsiB135
Cucsa.105290Bottle gourd (USVL1VR-Ls)cgylsiB136
Cucsa.105290Melon (DHL92) v3.6.1cgymedB135
Cucsa.105290Silver-seed gourdcarcgyB0152
Cucsa.105290Silver-seed gourdcarcgyB0238
Cucsa.105290Silver-seed gourdcarcgyB1144
Cucsa.105290Cucumber (Chinese Long) v3cgycucB128
Cucsa.105290Cucumber (Chinese Long) v3cgycucB129