CmoCh08G006380 (gene) Cucurbita moschata (Rifu)

NameCmoCh08G006380
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionDNA replication complex GINS protein PSF1
LocationCmo_Chr08 : 4148265 .. 4151502 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAGGTAAAGAAAAGCGCGAAATCCCTAATTCAGGGGTTGGTTCCGCCAGTTCCAAACCCTGCAGCGCCCGAGATTTCTTCATTTTCTTCGCCGTCTTCCTCTCTGTTGTTGCTGCACGGCCTCATTCTCTTCCTATCTCCCTTCATTCGCTTAGTCTTCTCGTTCAAGTCTGCCCATATCAAATTTTATCTTTCCATCCATTCAACGAACTTCAAAATTGGGAAATTTTGGAATTGGAGCAGTTTTGAATTCGATATAATTCTAGATTTCAAATTCATTTCGAGCTGGTTTCGATATCTGTATTTGCGTCGTAATAGCGAGTATGTATGGGAGAAAAGCATGTCAGTTGGTGAAAGAGCTAGCAAGCGGCGAGAAAGGACAGCTAGCACAGTTCAATGTAAGTCCACATGCTCGTTTTTTTTGATGTGTACGAACTGAGGTTGTTGGTCAGCTAGTATTGTGATTGCGTTTCTTTTTATATATTGACTTTTCCTATTTGCATCAGTAGGAGATCTTGGTTAGTTTTGACAGATTCGAAAAGAGTATAATTAATTTTTGTGTTCAAATGTTTGATGGAGTGGAAAATAAAATATTCATAGTATGGGTTTTTAATCTTGAGTTATGAATAGAAAATTAAAATTTTAGAAGTATATGAAATCCTGCAATCAAAATCTTAAACATTGAAATATTTGCACTCCTCGAGAGATGTTTAATTTTCTTTCACTTTAGCTGTTAATACCTCTACAACGGATGGAGTTTGCTTATTTTCACTAATACCGAGTTTGTTTGAAGTGATTGTTATACTTTTGGTGCAAATTGATCAAACAGCAGAGGCAATGTTGACTCATTAACTTTTTATCATGTATGCGTGCGTGTACAATTAACTACACGATTTCTATTGAGTTTTTAAATATGCTCTGTTTTGGATATACATTGTGAATGGTGATGGCTTTTGAGCACTTTCGGTAACAAGTAAACAACTTTAAAAGAAATTATGGTTTCTTATGATAGCAGTTCTCTGTCTCACAAATCACCGTGGTCAGTGTCCTAACGTCGAGCTATAGTGAAATTTCATAGTATATCTAATACTTTGCCATTTTGCTTTCTTATTGTCTCTGTGCTTCTCCAGAGCGACCTGTTTGAACAGGTTATTTCAGAATGCCAGCAACATCATCTTGAGCTTCAATCCTTGTTGAGGTTATAATATTCTACCTTTTCATTCACATAATTCATTAATGGATATGATATTTAGTTTTAAGTAGTAGCTGATCTGTTTCTGGTTTGTCCCATAGTAGTTGAACTGTTTGGTAGCAAAGTCGACGGTAATTAAACTGCTTCTAAGAGCATGCTCATTTGGTTAATAGTGGTTCAGTTATATATGACTAAGGAGAGCAGAATTGAGAAATGGTAGATGTTCACAGAATCAGGTCAAGGCTTCATTTCTTGACAATAGCACTTGGGAACTTTATCCGATGAACTGGTGGCCTTGGTTGGGAATAGAACTATAACATATGAACTTAAGGTAATTTTAACTTTTTAGTGAGTTTATAGTTTGAGAAATCTCCATCCATATCCCTAGGAAATCCACATCCAATGGTTTCAATCTGCATACCAGGAACTATCCCTTTAGTTCACTAATCACTACATTCCTGAACTTACTGTGGTACATTTTTGACCCATTGCATTTAAGAGTGTCCCTCCAAGATTGAACTGCACGTGTAGAAAGAAATCTACACATGGATGAAACAAGAGATTTGGTATATCTTTCAAGTACTAAAGTATGAAAGGAGTTTTTTTCCATCCCAATCCTAATCATTATGCCCTCATCTGGTTGATGGTGAGAAAATTCTACCTCTTGTTATGTCCCTCAAATAGTAACCAAATGCTAAAAGCTGACCAGCCATGTATTCACTGTCACTCTGGTTGTGAGTGCGCCCGAACTGATGAATTCTAAAGCCTGATATTCTCCATTCTAATTACTCCTCAATTTATGCGAGTATAGAGCGAAAGTGGCATATATATGCATTTAATTATCGGTTTAGATTCATTGGCAATCATATAATGAAACGACAGTATTTCAGGATGACTAAATGTAGCTCATATGATAATCTGAAACAGGAAAATCCAGGATGAAGGATTGGATCTACAGACGACTAAGAATGAAGATCATTTTGGTGCACTCGTTCACCACCTAGCATTAGTTCGCAATAAACGCTGCCTCATGGCCTATGTGTAAGTGTAATATTGTGAGATAACTTTGAGGAACTGGCTTCTTACCTTGTTTGCTGGATTGAGATAATTTTGTAATATTTGTCAATCAAATGTCGTTGTACATGAACAAACAGGTACAATCGAGCTGAAACTATAAGAAGTTTGATATGGAAGATAGTAGGATCTATGCTTCCACCTGAAATACAAGAGAAGCTCAGCAACTCAGAGGAAGAGTATTTTAAGAAGCATTCTGCTCGTCTAAAAGAATACATGTCGAAAATGGAGTTGGATTTGACTGTGGTAATTTCAGACGCCGCTCAATGACACTTTACAATAACACACAATGTTTTTGTAGGATAACTTTTTAGATATACGCTTCCAACTCAAACTCCTCGGACTAAAATCTTCAAGTTTATCATTGGCAGGATATGGTGCCTCCTAAGGATCCATATATCCAAGTGAGGGTACTCGATGATATCGGTGAAGGAATAGTACTGAGTGATGATAAAACAGCAAATTTTGCACTTCATTCCATACATTTTCTTAAACGTACTGATGCTGAGCAATACATCTCACGGGTGGGAATCCCCGTAAACCTTGATCATTCTTATTATTGTTTTGCTTAGATGTCTTCTGAACTCGTATTCTTTGAAGAACAGGGGTTAATGGAGGAGCTTAGAGGCTGAGTGTTACATTGAAGATGGAGCTTAGTTGGAGATGTTTCTGCAAACCTGGAAAAGGGGAAGAACCAAATGAGAAAGCGGGGAAAGAAGTGGAAGTGTGAGGTGTTACAGTCATGTTTGTCTAAGGCGTGTTGCAATGGCCGCGTGTCCGTTGCATGTCAAACTCCTTGTGTTGTATCGCTCTATTGCTTTCCTTTACCACTGTTATGATGTATAGCTTCTTTTTTGTATTTTTTAAGTGTAAGATGTTATGTCTATATTTGGTAGACTTGAAATGTTCCAAAATATACTATAGAAGTATGCGACTAGTTGCTAAATCTTTTATGCTATTTAAGTCGTTGCG

mRNA sequence

TTAGGTAAAGAAAAGCGCGAAATCCCTAATTCAGGGGTTGGTTCCGCCAGTTCCAAACCCTGCAGCGCCCGAGATTTCTTCATTTTCTTCGCCGTCTTCCTCTCTGTTGTTGCTGCACGGCCTCATTCTCTTCCTATCTCCCTTCATTCGCTTAGTCTTCTCGTTCAAGTCTGCCCATATCAAATTTTATCTTTCCATCCATTCAACGAACTTCAAAATTGGGAAATTTTGGAATTGGAGCAGTTTTGAATTCGATATAATTCTAGATTTCAAATTCATTTCGAGCTGGTTTCGATATCTGTATTTGCGTCGTAATAGCGAGTATGTATGGGAGAAAAGCATGTCAGTTGGTGAAAGAGCTAGCAAGCGGCGAGAAAGGACAGCTAGCACAGTTCAATAGCGACCTGTTTGAACAGGTTATTTCAGAATGCCAGCAACATCATCTTGAGCTTCAATCCTTGTTGAGGAAAATCCAGGATGAAGGATTGGATCTACAGACGACTAAGAATGAAGATCATTTTGGTGCACTCGTTCACCACCTAGCATTAGTTCGCAATAAACGCTGCCTCATGGCCTATGTGTACAATCGAGCTGAAACTATAAGAAGTTTGATATGGAAGATAGTAGGATCTATGCTTCCACCTGAAATACAAGAGAAGCTCAGCAACTCAGAGGAAGAGTATTTTAAGAAGCATTCTGCTCGTCTAAAAGAATACATGTCGAAAATGGAGTTGGATTTGACTGTGGATATGGTGCCTCCTAAGGATCCATATATCCAAGTGAGGGTACTCGATGATATCGGTGAAGGAATAGTACTGAGTGATGATAAAACAGCAAATTTTGCACTTCATTCCATACATTTTCTTAAACGTACTGATGCTGAGCAATACATCTCACGGGGGTTAATGGAGGAGCTTAGAGGCTGAGTGTTACATTGAAGATGGAGCTTAGTTGGAGATGTTTCTGCAAACCTGGAAAAGGGGAAGAACCAAATGAGAAAGCGGGGAAAGAAGTGGAAGTGTGAGGTGTTACAGTCATGTTTGTCTAAGGCGTGTTGCAATGGCCGCGTGTCCGTTGCATGTCAAACTCCTTGTGTTGTATCGCTCTATTGCTTTCCTTTACCACTGTTATGATGTATAGCTTCTTTTTTGTATTTTTTAAGTGTAAGATGTTATGTCTATATTTGGTAGACTTGAAATGTTCCAAAATATACTATAGAAGTATGCGACTAGTTGCTAAATCTTTTATGCTATTTAAGTCGTTGCG

Coding sequence (CDS)

ATGTATGGGAGAAAAGCATGTCAGTTGGTGAAAGAGCTAGCAAGCGGCGAGAAAGGACAGCTAGCACAGTTCAATAGCGACCTGTTTGAACAGGTTATTTCAGAATGCCAGCAACATCATCTTGAGCTTCAATCCTTGTTGAGGAAAATCCAGGATGAAGGATTGGATCTACAGACGACTAAGAATGAAGATCATTTTGGTGCACTCGTTCACCACCTAGCATTAGTTCGCAATAAACGCTGCCTCATGGCCTATGTGTACAATCGAGCTGAAACTATAAGAAGTTTGATATGGAAGATAGTAGGATCTATGCTTCCACCTGAAATACAAGAGAAGCTCAGCAACTCAGAGGAAGAGTATTTTAAGAAGCATTCTGCTCGTCTAAAAGAATACATGTCGAAAATGGAGTTGGATTTGACTGTGGATATGGTGCCTCCTAAGGATCCATATATCCAAGTGAGGGTACTCGATGATATCGGTGAAGGAATAGTACTGAGTGATGATAAAACAGCAAATTTTGCACTTCATTCCATACATTTTCTTAAACGTACTGATGCTGAGCAATACATCTCACGGGGGTTAATGGAGGAGCTTAGAGGCTGA
BLAST of CmoCh08G006380 vs. Swiss-Prot
Match: PSF1_DICDI (Probable DNA replication complex GINS protein PSF1 OS=Dictyostelium discoideum GN=gins1 PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.7e-23
Identity = 64/200 (32.00%), Postives = 113/200 (56.50%), Query Frame = 1

Query: 1   MYGRKACQLVKELASGEKGQLAQFNSDLFEQVISECQQHHLELQSLLRKIQDEGLDLQTT 60
           M+ + A +L+KEL   +   +  +N    +  I E    + +L   + + +++       
Sbjct: 1   MFTKTAIELIKELRGTDS--IPHYNDTSIKATIDEMIALYEDLIKTITEHKEQ------- 60

Query: 61  KNEDHF--GALVHHLALVRNKRCLMAYVYNRAETIRSLIWKIVGSMLPPEIQEKLSNSEE 120
           K E  +   A+  H ++ R+KRC++AY+  R   I+   W    S+LP +++E+LS +E 
Sbjct: 61  KKEPFYLQHAITFHNSINRDKRCILAYLNERLNRIKEYRWSSGQSLLPDQLKERLSQNEI 120

Query: 121 EYFKKHSARLKEYMSKMELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSI 180
           ++F ++   L EY SK+ LDLT+D  PPK+ YI+VRV+ ++GE +VL+   T N  L++ 
Sbjct: 121 QFFSEYDKILTEYNSKVGLDLTIDPQPPKELYIEVRVIKELGE-VVLNSGCTVNLNLNTT 180

Query: 181 HFLKRTDAEQYISRGLMEEL 199
           HFLKR+D    +  G +E +
Sbjct: 181 HFLKRSDITNLVKNGSLEHI 190

BLAST of CmoCh08G006380 vs. Swiss-Prot
Match: PSF1_MOUSE (DNA replication complex GINS protein PSF1 OS=Mus musculus GN=Gins1 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.0e-22
Identity = 74/203 (36.45%), Postives = 109/203 (53.69%), Query Frame = 1

Query: 1   MYGRKACQLVKELASGEKGQLAQFNSDLFEQVISECQQHHLELQSLLRKIQDEGL-DLQT 60
           M+  KA +LV+EL    +GQL  FN D   QV+ E +  + + QS + + +  G  DL  
Sbjct: 1   MFCEKAMELVRELHRAPEGQLPAFNEDGLRQVLEEMKALYEQNQSDVNEAKSAGRGDLIP 60

Query: 61  TKNEDHFGALVHHLALVRNKRCLMAYVYNRAETIRSLIWKIVGSMLPPEIQEKLSNSEEE 120
           T           H AL+RN+RC +AY+Y+R   IR+L W+  GS+LP  ++  +S  E E
Sbjct: 61  TVK-------FRHCALLRNRRCTIAYLYDRLLRIRALRWE-YGSVLPNSLRFHMSAEETE 120

Query: 121 YFKKHSARLKEYMSKM----ELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFAL 180
           +F  +   L  YM  +     LD+T D+ PPK  YI+VR L D GE   + D  +     
Sbjct: 121 WFNHYKKSLATYMRSLGGDEGLDITQDVKPPKSLYIEVRCLKDYGE-FEVDDGTSVLLKK 180

Query: 181 HSIHFLKRTDAEQYISRGLMEEL 199
           +S HFL R   EQ I +G++E +
Sbjct: 181 NSQHFLPRWKCEQLIRQGVLEHV 194

BLAST of CmoCh08G006380 vs. Swiss-Prot
Match: PSF1_BOVIN (DNA replication complex GINS protein PSF1 OS=Bos taurus GN=GINS1 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.0e-22
Identity = 72/203 (35.47%), Postives = 110/203 (54.19%), Query Frame = 1

Query: 1   MYGRKACQLVKELASGEKGQLAQFNSDLFEQVISECQQHHLELQSLLRKIQDEGL-DLQT 60
           M+  KA +LV+EL    +G+L  FN D   QV+ E +  + + QS + + +  G  DL  
Sbjct: 1   MFCEKAMELVRELHRAAEGRLPAFNEDGLRQVLEEMKALYEQNQSDVNEAKSSGRGDLIP 60

Query: 61  TKNEDHFGALVHHLALVRNKRCLMAYVYNRAETIRSLIWKIVGSMLPPEIQEKLSNSEEE 120
           T           H +L+RN+RC +AY+Y+R   IR+L W+  GS+LP  ++  +S  E +
Sbjct: 61  TIK-------FRHCSLLRNQRCTVAYLYDRLLRIRALRWE-YGSVLPSALRFHMSAEEMD 120

Query: 121 YFKKHSARLKEYMSKM----ELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFAL 180
           +F ++   L  YM  +     LD+T DM PPK  YI+VR L D GE   + D  +     
Sbjct: 121 WFNRYKKSLATYMRSLGGDEGLDITQDMKPPKSLYIEVRCLKDYGE-FEVEDGTSVLLKK 180

Query: 181 HSIHFLKRTDAEQYISRGLMEEL 199
           +S HFL R   EQ I +G++E +
Sbjct: 181 NSQHFLPRWKCEQLIRQGILEHV 194

BLAST of CmoCh08G006380 vs. Swiss-Prot
Match: PSF1_HUMAN (DNA replication complex GINS protein PSF1 OS=Homo sapiens GN=GINS1 PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.9e-22
Identity = 71/204 (34.80%), Postives = 109/204 (53.43%), Query Frame = 1

Query: 1   MYGRKACQLVKELASGEKGQLAQFNSDLFEQVISECQQHHLELQSLLRKIQDEGLD--LQ 60
           M+  KA +L++EL    +GQL  FN D   QV+ E +  + + QS + + +  G    + 
Sbjct: 1   MFCEKAMELIRELHRAPEGQLPAFNEDGLRQVLEEMKALYEQNQSDVNEAKSGGRSDLIP 60

Query: 61  TTKNEDHFGALVHHLALVRNKRCLMAYVYNRAETIRSLIWKIVGSMLPPEIQEKLSNSEE 120
           T K          H +L+RN+RC +AY+Y+R   IR+L W+  GS+LP  ++  ++  E 
Sbjct: 61  TIK--------FRHCSLLRNRRCTVAYLYDRLLRIRALRWE-YGSVLPNALRFHMAAEEM 120

Query: 121 EYFKKHSARLKEYMSKM----ELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFA 180
           E+F  +   L  YM  +     LD+T DM PPK  YI+VR L D GE   + D  +    
Sbjct: 121 EWFNNYKRSLATYMRSLGGDEGLDITQDMKPPKSLYIEVRCLKDYGE-FEVDDGTSVLLK 180

Query: 181 LHSIHFLKRTDAEQYISRGLMEEL 199
            +S HFL R   EQ I +G++E +
Sbjct: 181 KNSQHFLPRWKCEQLIRQGVLEHI 194

BLAST of CmoCh08G006380 vs. Swiss-Prot
Match: PSF1_CAEEL (Probable DNA replication complex GINS protein PSF1 OS=Caenorhabditis elegans GN=psf-1 PE=3 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 3.6e-15
Identity = 60/195 (30.77%), Postives = 98/195 (50.26%), Query Frame = 1

Query: 5   KACQLVKELASGEKGQLAQFNSDLFEQVISECQQHHLELQSLLRKIQDEGLDLQTTKNED 64
           KA QLV E+       L  +N++L  Q   +  +   +  +++ KI+  GL   +T  + 
Sbjct: 14  KALQLVLEMKRNPD-VLPPYNTELVRQCYQKIDELFQKNAAVVEKIR-AGLPHDSTLLQP 73

Query: 65  HFGALVHHLALVRNKRCLMAYVYNRAETIRSLIWKIVGSMLPPEIQEKLSNSEEEYFKKH 124
              A+ H       +RC+MAYV  R   IRS  WK  G  LP  ++  L ++E ++F ++
Sbjct: 74  RLAAMCHI------RRCMMAYVNERKNRIRSFRWKY-GGALPASVRNALCDAEIQFFNEY 133

Query: 125 SARLKEYMSKME---LDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHFL 184
           S+ L  + S +    ++L +   PPK  ++QVR L+D GE    SD      +  S+H L
Sbjct: 134 SSTLARFQSNLGEGGVNLLLHSAPPKSLFVQVRALEDYGE-FETSDGTQVQLSKDSLHSL 193

Query: 185 KRTDAEQYISRGLME 197
            R D E  I +G++E
Sbjct: 194 PRQDCEMLIRQGVLE 198

BLAST of CmoCh08G006380 vs. TrEMBL
Match: A0A0A0K8U8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G433190 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 7.1e-103
Identity = 187/200 (93.50%), Postives = 196/200 (98.00%), Query Frame = 1

Query: 1   MYGRKACQLVKELASGEKGQLAQFNSDLFEQVISECQQHHLELQSLLRKIQDEGLDLQTT 60
           MYGRKACQLVKELASGEKGQL  FNSDLFEQVISECQQHHLELQSL+RK+Q+EGLDLQTT
Sbjct: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60

Query: 61  KNEDHFGALVHHLALVRNKRCLMAYVYNRAETIRSLIWKIVGSMLPPEIQEKLSNSEEEY 120
           KNEDHFGAL+HHLALVRNKRCLMAYV+NRAE IRSL+WK+VGSM+PPEIQEKLSNSEEEY
Sbjct: 61  KNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEEY 120

Query: 121 FKKHSARLKEYMSKMELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180
           FKKHSARLKEYMSK+ELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF
Sbjct: 121 FKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180

Query: 181 LKRTDAEQYISRGLMEELRG 201
           LKRTDAEQYISRGLMEEL G
Sbjct: 181 LKRTDAEQYISRGLMEELTG 200

BLAST of CmoCh08G006380 vs. TrEMBL
Match: V7BUE2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G004200g PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 1.7e-85
Identity = 155/200 (77.50%), Postives = 181/200 (90.50%), Query Frame = 1

Query: 1   MYGRKACQLVKELASGEKGQLAQFNSDLFEQVISECQQHHLELQSLLRKIQDEGLDLQTT 60
           MYGR ACQLVKE ASG+KGQL  FNSDLF+QV++EC QHHLELQSL+RKIQ+EGLD+QT 
Sbjct: 1   MYGRTACQLVKEFASGDKGQLVSFNSDLFQQVVAECSQHHLELQSLIRKIQEEGLDIQTA 60

Query: 61  KNEDHFGALVHHLALVRNKRCLMAYVYNRAETIRSLIWKIVGSMLPPEIQEKLSNSEEEY 120
           +N DH+GAL+HHLALVRNKRCLMAYVYNRAE IR+L+WKI G +LP EI+EKLS++EEE+
Sbjct: 61  RNADHYGALIHHLALVRNKRCLMAYVYNRAEIIRNLLWKI-GHVLPQEIEEKLSHAEEEH 120

Query: 121 FKKHSARLKEYMSKMELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180
           F+KHS  LK YMSK+ +DLTVDMVPPKDPYI+VRVLDDIG+GI+LSDDKTANFA HS+H 
Sbjct: 121 FRKHSTALKSYMSKVMVDLTVDMVPPKDPYIKVRVLDDIGDGIMLSDDKTANFACHSMHL 180

Query: 181 LKRTDAEQYISRGLMEELRG 201
           LKRTDAEQ++SRG MEEL G
Sbjct: 181 LKRTDAEQFVSRGQMEELTG 199

BLAST of CmoCh08G006380 vs. TrEMBL
Match: V7BW96_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G019100g PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 3.0e-85
Identity = 155/200 (77.50%), Postives = 181/200 (90.50%), Query Frame = 1

Query: 1   MYGRKACQLVKELASGEKGQLAQFNSDLFEQVISECQQHHLELQSLLRKIQDEGLDLQTT 60
           MYGR ACQLVKE ASG++GQL  FNSDLF+QV++EC QHHLELQSL+RKIQ+EGLD+QT 
Sbjct: 1   MYGRTACQLVKEFASGDEGQLVSFNSDLFQQVVAECSQHHLELQSLIRKIQEEGLDIQTA 60

Query: 61  KNEDHFGALVHHLALVRNKRCLMAYVYNRAETIRSLIWKIVGSMLPPEIQEKLSNSEEEY 120
           +N DH+GAL+HHLALVRNKRCLMAYVYNRAETIR+L+WKI G +LP EI+EKL ++EEE+
Sbjct: 61  RNADHYGALIHHLALVRNKRCLMAYVYNRAETIRNLVWKI-GHVLPQEIEEKLCHAEEEH 120

Query: 121 FKKHSARLKEYMSKMELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180
           F+KHS  LK YMSK+ +DLTVDMVPPKDPYI+VRVLDDIG+GI+LSDDKTANFA HS+H 
Sbjct: 121 FRKHSTALKSYMSKVLVDLTVDMVPPKDPYIKVRVLDDIGDGILLSDDKTANFACHSMHL 180

Query: 181 LKRTDAEQYISRGLMEELRG 201
           LKRTDAEQ+ISRG MEEL G
Sbjct: 181 LKRTDAEQFISRGQMEELTG 199

BLAST of CmoCh08G006380 vs. TrEMBL
Match: A0A072VHS7_MEDTR (DNA replication complex GINS protein PSF1 OS=Medicago truncatula GN=MTR_1g052500 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 1.3e-83
Identity = 154/200 (77.00%), Postives = 177/200 (88.50%), Query Frame = 1

Query: 1   MYGRKACQLVKELASGEKGQLAQFNSDLFEQVISECQQHHLELQSLLRKIQDEGLDLQTT 60
           M+GRKACQLVKE ASGEKGQL  FN DLFEQV+ EC QHHL+LQSL+RK+Q+EGLD+QT 
Sbjct: 1   MFGRKACQLVKEFASGEKGQLTPFNKDLFEQVVGECNQHHLDLQSLIRKMQEEGLDVQTA 60

Query: 61  KNEDHFGALVHHLALVRNKRCLMAYVYNRAETIRSLIWKIVGSMLPPEIQEKLSNSEEEY 120
           +N DH+GAL+H  ++VRNKRCLMAYVYNRAETIRSL+WKI G ++P EI+EKL + EEEY
Sbjct: 61  RNADHYGALIHLFSIVRNKRCLMAYVYNRAETIRSLLWKI-GPVIPKEIEEKLDHREEEY 120

Query: 121 FKKHSARLKEYMSKMELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180
           FKKHS+ LK YMSK+ +DLTVDMVPPKDPYIQVRVL+DI EGIVLSDDK  NFA HS+HF
Sbjct: 121 FKKHSSALKSYMSKVFVDLTVDMVPPKDPYIQVRVLEDIREGIVLSDDKNPNFARHSMHF 180

Query: 181 LKRTDAEQYISRGLMEELRG 201
           LKRTDAE+YISRGLMEEL G
Sbjct: 181 LKRTDAEKYISRGLMEELTG 199

BLAST of CmoCh08G006380 vs. TrEMBL
Match: G7IYB5_MEDTR (DNA replication complex GINS protein PSF1 OS=Medicago truncatula GN=MTR_3g005080 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 1.4e-82
Identity = 152/200 (76.00%), Postives = 176/200 (88.00%), Query Frame = 1

Query: 1   MYGRKACQLVKELASGEKGQLAQFNSDLFEQVISECQQHHLELQSLLRKIQDEGLDLQTT 60
           M+GRKACQLVKE ASGEKGQL  FN DLFEQV+ EC QHHL+LQSL+RK+Q+EGLD+QT 
Sbjct: 1   MFGRKACQLVKEFASGEKGQLTPFNKDLFEQVVGECSQHHLDLQSLIRKMQEEGLDVQTA 60

Query: 61  KNEDHFGALVHHLALVRNKRCLMAYVYNRAETIRSLIWKIVGSMLPPEIQEKLSNSEEEY 120
           +N DH+GAL+H  ++VRNKRCL AYVYNRAETIR+L+WKI G ++P EI+EKL + EEEY
Sbjct: 61  RNADHYGALIHLFSIVRNKRCLTAYVYNRAETIRNLLWKI-GPVIPKEIEEKLDHREEEY 120

Query: 121 FKKHSARLKEYMSKMELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180
           FKKHS+ LK YMSK+ +DLTVDMVPPKDPYIQVRVL+DI EGIVLSDDK  NFA HS+HF
Sbjct: 121 FKKHSSALKSYMSKVFVDLTVDMVPPKDPYIQVRVLEDIREGIVLSDDKNPNFARHSMHF 180

Query: 181 LKRTDAEQYISRGLMEELRG 201
           LKRTDAE+YISRGLMEEL G
Sbjct: 181 LKRTDAEKYISRGLMEELTG 199

BLAST of CmoCh08G006380 vs. TAIR10
Match: AT1G80190.1 (AT1G80190.1 partner of SLD five 1)

HSP 1 Score: 275.0 bits (702), Expect = 3.6e-74
Identity = 135/202 (66.83%), Postives = 162/202 (80.20%), Query Frame = 1

Query: 1   MYGRKACQLVKELASGEKGQLAQFNSDLFEQVISECQQHHLELQSLLRKIQDEGLDLQTT 60
           MYGRK  QL+K+ A+GEKGQL  FNS LF++ I EC Q+H  +QSL+RK+Q EGLD+Q  
Sbjct: 1   MYGRKGYQLIKDFATGEKGQLKPFNSKLFDETIEECDQNHHLIQSLIRKMQQEGLDVQNN 60

Query: 61  KNEDHFGALVHHLALVRNKRCLMAYVYNRAETIRSLIWKIVGSM--LPPEIQEKLSNSEE 120
           +N DH+GAL+HHLAL+RNKRCLMAYVYNRAE +R L W++   +  LP EIQEKL+  E+
Sbjct: 61  RNADHYGALIHHLALIRNKRCLMAYVYNRAEIVRDLAWRVGLELLDLPSEIQEKLTTLEK 120

Query: 121 EYFKKHSARLKEYMSKMELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSI 180
           EYFK HS  LK YM K+ ++L VDMVPPKDPYI+VR+LDDI EGIVLS DKT NFA HS+
Sbjct: 121 EYFKNHSVALKSYMGKVGIELNVDMVPPKDPYIKVRILDDIDEGIVLS-DKTTNFARHSM 180

Query: 181 HFLKRTDAEQYISRGLMEELRG 201
           HFLKRTDAE YI+RG MEEL G
Sbjct: 181 HFLKRTDAEPYIARGQMEELTG 201

BLAST of CmoCh08G006380 vs. NCBI nr
Match: gi|659122340|ref|XP_008461089.1| (PREDICTED: probable DNA replication complex GINS protein PSF1 [Cucumis melo])

HSP 1 Score: 383.3 bits (983), Expect = 2.7e-103
Identity = 188/200 (94.00%), Postives = 197/200 (98.50%), Query Frame = 1

Query: 1   MYGRKACQLVKELASGEKGQLAQFNSDLFEQVISECQQHHLELQSLLRKIQDEGLDLQTT 60
           MYGRKACQLV ELASGEKGQL  FNSDLFEQVISECQQHHLELQSL+RK+Q+EGLDLQTT
Sbjct: 1   MYGRKACQLVTELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60

Query: 61  KNEDHFGALVHHLALVRNKRCLMAYVYNRAETIRSLIWKIVGSMLPPEIQEKLSNSEEEY 120
           KNEDHFGAL+HHLALVRNKRCLMAYV+NRAETIRSLIWK++GSM+PPEIQEKLSNSEEEY
Sbjct: 61  KNEDHFGALIHHLALVRNKRCLMAYVHNRAETIRSLIWKLLGSMIPPEIQEKLSNSEEEY 120

Query: 121 FKKHSARLKEYMSKMELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180
           FKKHSARLKEYMSK+ELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF
Sbjct: 121 FKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180

Query: 181 LKRTDAEQYISRGLMEELRG 201
           LKRTDAEQYISRGLMEELRG
Sbjct: 181 LKRTDAEQYISRGLMEELRG 200

BLAST of CmoCh08G006380 vs. NCBI nr
Match: gi|449436120|ref|XP_004135842.1| (PREDICTED: probable DNA replication complex GINS protein PSF1 [Cucumis sativus])

HSP 1 Score: 381.3 bits (978), Expect = 1.0e-102
Identity = 187/200 (93.50%), Postives = 196/200 (98.00%), Query Frame = 1

Query: 1   MYGRKACQLVKELASGEKGQLAQFNSDLFEQVISECQQHHLELQSLLRKIQDEGLDLQTT 60
           MYGRKACQLVKELASGEKGQL  FNSDLFEQVISECQQHHLELQSL+RK+Q+EGLDLQTT
Sbjct: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60

Query: 61  KNEDHFGALVHHLALVRNKRCLMAYVYNRAETIRSLIWKIVGSMLPPEIQEKLSNSEEEY 120
           KNEDHFGAL+HHLALVRNKRCLMAYV+NRAE IRSL+WK+VGSM+PPEIQEKLSNSEEEY
Sbjct: 61  KNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEEY 120

Query: 121 FKKHSARLKEYMSKMELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180
           FKKHSARLKEYMSK+ELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF
Sbjct: 121 FKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180

Query: 181 LKRTDAEQYISRGLMEELRG 201
           LKRTDAEQYISRGLMEEL G
Sbjct: 181 LKRTDAEQYISRGLMEELTG 200

BLAST of CmoCh08G006380 vs. NCBI nr
Match: gi|1009113000|ref|XP_015871190.1| (PREDICTED: DNA replication complex GINS protein PSF1 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 327.0 bits (837), Expect = 2.3e-86
Identity = 158/200 (79.00%), Postives = 183/200 (91.50%), Query Frame = 1

Query: 1   MYGRKACQLVKELASGEKGQLAQFNSDLFEQVISECQQHHLELQSLLRKIQDEGLDLQTT 60
           MYGRKACQLVKEL +GEKGQL  FNSDLF+QVI+EC QH+ E+QSL RK+++EGLD++TT
Sbjct: 1   MYGRKACQLVKELTTGEKGQLMPFNSDLFDQVIAECGQHYFEIQSLTRKMEEEGLDIETT 60

Query: 61  KNEDHFGALVHHLALVRNKRCLMAYVYNRAETIRSLIWKIVGSMLPPEIQEKLSNSEEEY 120
           KNEDH+G+L+HHL+LVRNKRCLMAY+YNRAE +R+L WK VG +LP EIQEKLS+ EE+Y
Sbjct: 61  KNEDHYGSLIHHLSLVRNKRCLMAYLYNRAEILRNLTWK-VGPVLPQEIQEKLSHLEEDY 120

Query: 121 FKKHSARLKEYMSKMELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180
           FKKHSA LK YMSK++LDL VDMVPPKDPYIQVRVLDDIG+GIVLSDDKTANFA HS+HF
Sbjct: 121 FKKHSASLKSYMSKLDLDLAVDMVPPKDPYIQVRVLDDIGDGIVLSDDKTANFAPHSMHF 180

Query: 181 LKRTDAEQYISRGLMEELRG 201
           LKRTDAEQ+ISRGLMEEL G
Sbjct: 181 LKRTDAEQFISRGLMEELTG 199

BLAST of CmoCh08G006380 vs. NCBI nr
Match: gi|1021561272|ref|XP_016171876.1| (PREDICTED: probable DNA replication complex GINS protein PSF1 [Arachis ipaensis])

HSP 1 Score: 323.9 bits (829), Expect = 1.9e-85
Identity = 161/200 (80.50%), Postives = 183/200 (91.50%), Query Frame = 1

Query: 1   MYGRKACQLVKELASGEKGQLAQFNSDLFEQVISECQQHHLELQSLLRKIQDEGLDLQTT 60
           MYGRKAC+LVKE AS  KGQL Q+NSDLFEQV++EC QHHLELQSL+RK+Q+EGLD+QT 
Sbjct: 1   MYGRKACELVKEFASVGKGQLTQYNSDLFEQVVAECSQHHLELQSLIRKMQEEGLDVQTA 60

Query: 61  KNEDHFGALVHHLALVRNKRCLMAYVYNRAETIRSLIWKIVGSMLPPEIQEKLSNSEEEY 120
           +N DH+GAL+HHL+LVRNKRCLMAYV NRAE IRSL+WKI GS+LP EI+EKLS++EEEY
Sbjct: 61  RNADHYGALIHHLSLVRNKRCLMAYVNNRAEIIRSLLWKI-GSVLPKEIEEKLSHTEEEY 120

Query: 121 FKKHSARLKEYMSKMELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180
           F K+S  LK+YMSKMELDLTVDMVPPKDPYI+VRVLDDIG+GIVLS DKTANFA HSIHF
Sbjct: 121 FNKYSGELKKYMSKMELDLTVDMVPPKDPYIKVRVLDDIGDGIVLS-DKTANFARHSIHF 180

Query: 181 LKRTDAEQYISRGLMEELRG 201
           LKRTDAEQ+ISRGLMEEL G
Sbjct: 181 LKRTDAEQFISRGLMEELTG 198

BLAST of CmoCh08G006380 vs. NCBI nr
Match: gi|593696358|ref|XP_007148661.1| (hypothetical protein PHAVU_005G004200g [Phaseolus vulgaris])

HSP 1 Score: 323.6 bits (828), Expect = 2.5e-85
Identity = 155/200 (77.50%), Postives = 181/200 (90.50%), Query Frame = 1

Query: 1   MYGRKACQLVKELASGEKGQLAQFNSDLFEQVISECQQHHLELQSLLRKIQDEGLDLQTT 60
           MYGR ACQLVKE ASG+KGQL  FNSDLF+QV++EC QHHLELQSL+RKIQ+EGLD+QT 
Sbjct: 1   MYGRTACQLVKEFASGDKGQLVSFNSDLFQQVVAECSQHHLELQSLIRKIQEEGLDIQTA 60

Query: 61  KNEDHFGALVHHLALVRNKRCLMAYVYNRAETIRSLIWKIVGSMLPPEIQEKLSNSEEEY 120
           +N DH+GAL+HHLALVRNKRCLMAYVYNRAE IR+L+WKI G +LP EI+EKLS++EEE+
Sbjct: 61  RNADHYGALIHHLALVRNKRCLMAYVYNRAEIIRNLLWKI-GHVLPQEIEEKLSHAEEEH 120

Query: 121 FKKHSARLKEYMSKMELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180
           F+KHS  LK YMSK+ +DLTVDMVPPKDPYI+VRVLDDIG+GI+LSDDKTANFA HS+H 
Sbjct: 121 FRKHSTALKSYMSKVMVDLTVDMVPPKDPYIKVRVLDDIGDGIMLSDDKTANFACHSMHL 180

Query: 181 LKRTDAEQYISRGLMEELRG 201
           LKRTDAEQ++SRG MEEL G
Sbjct: 181 LKRTDAEQFVSRGQMEELTG 199

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PSF1_DICDI4.7e-2332.00Probable DNA replication complex GINS protein PSF1 OS=Dictyostelium discoideum G... [more]
PSF1_MOUSE1.0e-2236.45DNA replication complex GINS protein PSF1 OS=Mus musculus GN=Gins1 PE=1 SV=1[more]
PSF1_BOVIN3.0e-2235.47DNA replication complex GINS protein PSF1 OS=Bos taurus GN=GINS1 PE=2 SV=1[more]
PSF1_HUMAN3.9e-2234.80DNA replication complex GINS protein PSF1 OS=Homo sapiens GN=GINS1 PE=1 SV=1[more]
PSF1_CAEEL3.6e-1530.77Probable DNA replication complex GINS protein PSF1 OS=Caenorhabditis elegans GN=... [more]
Match NameE-valueIdentityDescription
A0A0A0K8U8_CUCSA7.1e-10393.50Uncharacterized protein OS=Cucumis sativus GN=Csa_7G433190 PE=4 SV=1[more]
V7BUE2_PHAVU1.7e-8577.50Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G004200g PE=4 SV=1[more]
V7BW96_PHAVU3.0e-8577.50Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G019100g PE=4 SV=1[more]
A0A072VHS7_MEDTR1.3e-8377.00DNA replication complex GINS protein PSF1 OS=Medicago truncatula GN=MTR_1g052500... [more]
G7IYB5_MEDTR1.4e-8276.00DNA replication complex GINS protein PSF1 OS=Medicago truncatula GN=MTR_3g005080... [more]
Match NameE-valueIdentityDescription
AT1G80190.13.6e-7466.83 partner of SLD five 1[more]
Match NameE-valueIdentityDescription
gi|659122340|ref|XP_008461089.1|2.7e-10394.00PREDICTED: probable DNA replication complex GINS protein PSF1 [Cucumis melo][more]
gi|449436120|ref|XP_004135842.1|1.0e-10293.50PREDICTED: probable DNA replication complex GINS protein PSF1 [Cucumis sativus][more]
gi|1009113000|ref|XP_015871190.1|2.3e-8679.00PREDICTED: DNA replication complex GINS protein PSF1 isoform X1 [Ziziphus jujuba... [more]
gi|1021561272|ref|XP_016171876.1|1.9e-8580.50PREDICTED: probable DNA replication complex GINS protein PSF1 [Arachis ipaensis][more]
gi|593696358|ref|XP_007148661.1|2.5e-8577.50hypothetical protein PHAVU_005G004200g [Phaseolus vulgaris][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005339GINS_Psf1
IPR021151GINS_A
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006260 DNA replication
cellular_component GO:0005634 nucleus
cellular_component GO:0000811 GINS complex
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh08G006380.1CmoCh08G006380.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005339GINS complex, subunit Psf1PANTHERPTHR12914PARTNER OF SLD5coord: 1..200
score: 2.2
IPR021151GINS complexPFAMPF05916Sld5coord: 45..117
score: 6.
NoneNo IPR availableunknownSSF158573GINS helical bundle-likecoord: 1..147
score: 1.78

The following gene(s) are paralogous to this gene:

None