Cucsa.105270 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.105270
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold00929 : 32746 .. 34852 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGACCCCCcAAACCGAAGCAGCCACCGCGGTTTATGACCGGAACTCCACCGATGAATCTCGCGGCGGAGTTCATTTCATCTTCTCCCcTATGTTTTCCAATGGACGCCTAAGGGTTCTACTCTCGTATTTCTCCATCTTCCTTGTAAATATTGTACAATTAATTGAATATATAAATCAGTTGCCATTTCAAATTTCATTGTTTTCTTCCCAATTTCTGGACTTAGGTTTTCTCTACCGGAATTTCTTTTCGACGCTCTGCTTCAAATTTTCATCAGGTATCTCTATGGAGTTTTTTTtATtCTTTTGCTCCAAATTTGATCTCCTCGACTAAACTGCATGAAACAATCCTTGCTTGATTCTCTCGCGATCTGAAGATTTCGACAATGTACAAAGATTTATGCGATTCATGCAATTGTAACTTTTTGGAAAATGAATTTTGCCTAGAATCCTTCTGATTTTCCGTTCAAAAAATTTGAGTCTTGAAATTGGATGGTTTGGCCCTTGAAATGAGTGCGCCTAATCGGTTTGTCCCTGAGGCTCGTGGCAATTGGCCGCTATTGCCTCCTCCTTATCCTGATCCAAGAAACCAATCGTTCTATCGGCCTACGATGTCTGGAGTTGTTAGTAGTTGGAGAATGCCTTCAAATTTTGGGATTCCACCATGGAACAATTGGAACATCGGGTATGAACATGAGTTTGGGCGTTCATATACACCTGGTTTTAATGATACTCGCAGAATGTTACCTTCCGGACCAGGAATCGAATTCCGTGAAGGTCAATTATCAGAGCGTTGGAATGTTGATAACTCGAATGAAATGAAAGTATGCAGACTGTTCCAACGCCGGAAGAAATGTGCATATGGGGATCAGTGTCGTTTTCTTCATGAAATTCCTGACAAAACTAGGGATTCTGGCTCCTCCAGCCAAAATTATGAGGTTAGTACAGTAGCTTTTGGTCATGTTATGGATCGAGGAAGTGGGTTTGATCAATTGGAAGAAGTCCGATCAAAAGTACAAACGAAGGTGGTTGTCCGTGGTGAGATTCCAAAGCCTTTAATTGCCAAATCAAGGCCCTGTTACCCCTGGCAGACCACTGGTCGCTGCCCATATGGGGCCGGTTGTCGCTTTGCCCATGGGGAAGCAGGTATTGTGAGATCCTTCTTTCATTTCCATTATCAATTTACGATTCCATATGTTTTCAAGTGACTTACAGCTCTCCAAGCAAGAATGAATGCCTCAGCATGTATAAAATGTTTCTTTTGCCATTTTCAGTTCCGTTACTTGTTCCGAGCCCTCAAATTTTATGCAATAAATCACCTTGGCTTGATTCAAATGAATCCTCTTTTGTTTTATTTTTTtGTTTTTGACAATTCTGGAGTGGAGATCAAACTTCTAGCCTGAAAGTTGTCACATATGCTTAATTTCGATGCGCGATGCTCATTTTGGCTCAAATGTATCCCCTTTGTAATtCTTTTTTTTTtAAATTATTTGTGTGTATGTGTGGGGTTGATTTTAGGCTTAGAATATATTAACACTAAACAGTTATTGCATAACTATATATACTAATGGACATTCTAACTCTGAAATAGGCAAGATTTACGAACTCGAACTATAAATGTCAACCATATGGATCTACTTATTCATCCCTGCTTGAATCGTTTTCATGAAATCAAAAGTTGGTGATTGTCAAATTACAGGCATTAATATTTCCATTGTCTTCTTTGTTTTTGGAGAAAATAGAACTACAGAAGCTCGAGCCTTGCAATGCATCACAACGTGGGAGCGTAGGTGGTGTCTCTGGGACTGCAACAACTACTGCTGCTGTCGAAGCTGGATTAAGGAGCAGCAGAGAAATTGGAACCGATTGTAAGAATAAAGGGCCAAGAATTAACCAATTCTTTGAATCAAAGGAGTCTAAGAAGTTGATTGGCATTTATGCCGACTGGCTTGAAGATTGAGTTTTCCACATGACTTGCAGTACAAGGATTTGACCAAATCCCGAGGCTTTTTCTAATTCTCATAAACTGATTGAGAAAATGAAGGTTCCTCCTGAACTTCATAACTTCATATTGATACTGAATATAGCGTATGGATAATAGATATCATT

mRNA sequence

GGACCCCCCAAACCGAAGCAGCCACCGCGGTTTATGACCGGAACTCCACCGATGAATCTCGCGGCGGAGTTCATTTCATCTTCTCCCCTATGTTTTCCAATGGACGCCTAAGGGTTCTACTCTCGTATTTCTCCATCTTCCTTGTAAATATTGTACAATTAATTGAATATATAAATCAGTTGCCATTTCAAATTTCATTGTTTTCTTCCCAATTTCTGGACTTAGGTTTTCTCTACCGGAATTTCTTTTCGACGCTCTGCTTCAAATTTTCATCAGGTATCTCTATGGAGTTTTTTTTATTCTTTTGCTCCAAATTTGATCTCCTCGACTAAACTGCATGAAACAATCCTTGCTTGATTCTCTCGCGATCTGAAGATTTCGACAATGTACAAAGATTTATGCGATTCATGCAATTGTAACTTTTTGGAAAATGAATTTTGCCTAGAATCCTTCTGATTTTCCGTTCAAAAAATTTGAGTCTTGAAATTGGATGGTTTGGCCCTTGAAATGAGTGCGCCTAATCGGTTTGTCCCTGAGGCTCGTGGCAATTGGCCGCTATTGCCTCCTCCTTATCCTGATCCAAGAAACCAATCGTTCTATCGGCCTACGATGTCTGGAGTTGTTAGTAGTTGGAGAATGCCTTCAAATTTTGGGATTCCACCATGGAACAATTGGAACATCGGGTATGAACATGAGTTTGGGCGTTCATATACACCTGGTTTTAATGATACTCGCAGAATGTTACCTTCCGGACCAGGAATCGAATTCCGTGAAGGTCAATTATCAGAGCGTTGGAATGTTGATAACTCGAATGAAATGAAAGTATGCAGACTGTTCCAACGCCGGAAGAAATGTGCATATGGGGATCAGTGTCGTTTTCTTCATGAAATTCCTGACAAAACTAGGGATTCTGGCTCCTCCAGCCAAAATTATGAGGTTAGTACAGTAGCTTTTGGTCATGTTATGGATCGAGGAAGTGGGTTTGATCAATTGGAAGAAGTCCGATCAAAAGTACAAACGAAGGTGGTTGTCCGTGGTGAGATTCCAAAGCCTTTAATTGCCAAATCAAGGCCCTGTTACCCCTGGCAGACCACTGGTCGCTGCCCATATGGGGCCGGTTGTCGCTTTGCCCATGGGGAAGCAGAACTACAGAAGCTCGAGCCTTGCAATGCATCACAACGTGGGAGCGTAGGTGGTGTCTCTGGGACTGCAACAACTACTGCTGCTGTCGAAGCTGGATTAAGGAGCAGCAGAGAAATTGGAACCGATTGTAAGAATAAAGGGCCAAGAATTAACCAATTCTTTGAATCAAAGGAGTCTAAGAAGTTGATTGGCATTTATGCCGACTGGCTTGAAGATTGAGTTTTCCACATGACTTGCAGTACAAGGATTTGACCAAATCCCGAGGCTTTTTCTAATTCTCATAAACTGATTGAGAAAATGAAGGTTCCTCCTGAACTTCATAACTTCATATTGATACTGAATATAGCGTATGGATAATAGATATCATT

Coding sequence (CDS)

ATGAGTGCGCCTAATCGGTTTGTCCCTGAGGCTCGTGGCAATTGGCCGCTATTGCCTCCTCCTTATCCTGATCCAAGAAACCAATCGTTCTATCGGCCTACGATGTCTGGAGTTGTTAGTAGTTGGAGAATGCCTTCAAATTTTGGGATTCCACCATGGAACAATTGGAACATCGGGTATGAACATGAGTTTGGGCGTTCATATACACCTGGTTTTAATGATACTCGCAGAATGTTACCTTCCGGACCAGGAATCGAATTCCGTGAAGGTCAATTATCAGAGCGTTGGAATGTTGATAACTCGAATGAAATGAAAGTATGCAGACTGTTCCAACGCCGGAAGAAATGTGCATATGGGGATCAGTGTCGTTTTCTTCATGAAATTCCTGACAAAACTAGGGATTCTGGCTCCTCCAGCCAAAATTATGAGGTTAGTACAGTAGCTTTTGGTCATGTTATGGATCGAGGAAGTGGGTTTGATCAATTGGAAGAAGTCCGATCAAAAGTACAAACGAAGGTGGTTGTCCGTGGTGAGATTCCAAAGCCTTTAATTGCCAAATCAAGGCCCTGTTACCCCTGGCAGACCACTGGTCGCTGCCCATATGGGGCCGGTTGTCGCTTTGCCCATGGGGAAGCAGAACTACAGAAGCTCGAGCCTTGCAATGCATCACAACGTGGGAGCGTAGGTGGTGTCTCTGGGACTGCAACAACTACTGCTGCTGTCGAAGCTGGATTAAGGAGCAGCAGAGAAATTGGAACCGATTGTAAGAATAAAGGGCCAAGAATTAACCAATTCTTTGAATCAAAGGAGTCTAAGAAGTTGATTGGCATTTATGCCGACTGGCTTGAAGATTGA

Protein sequence

MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRPTMSGVVSSWRMPSNFGIPPWNNWNIGYEHEFGRSYTPGFNDTRRMLPSGPGIEFREGQLSERWNVDNSNEMKVCRLFQRRKKCAYGDQCRFLHEIPDKTRDSGSSSQNYEVSTVAFGHVMDRGSGFDQLEEVRSKVQTKVVVRGEIPKPLIAKSRPCYPWQTTGRCPYGAGCRFAHGEAELQKLEPCNASQRGSVGGVSGTATTTAAVEAGLRSSREIGTDCKNKGPRINQFFESKESKKLIGIYADWLED*
Homology
[Close]
BLAST of Cucsa.105270 vs. Swiss-Prot
Match: C3H39_ARATH (Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana GN=At3g19360 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.0e-15
Identity = 57/188 (30.32%), Postives = 85/188 (45.21%), Query Frame = 1 

Query: 104 MKVCRLFQRRKKCAYGDQCRFLHEIPDKTR-DSGS--SSQNYEVSTVAFGHVMDRGSGFD 163
           MK+CR F   ++C YGD+C F+HE   K R DSG    S    V   A     D  S   
Sbjct: 186 MKLCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSVISVGATAADQPSDTASNLI 245

Query: 164 QLEEVRSKVQTKVVVRGEIPKPLIAKSRPCYPWQTTGRCPYGAGCRFAHGEAEL-QKLEP 223
           ++    S      +  G + K +  K+R C  +  TG+CP+G  C FAHG+AEL   +  
Sbjct: 246 EVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQAELHNSVGR 305

Query: 224 CNASQRGSVGGVSGTATTTAAVEAGLRSSREIGTD---CKNKGPRINQFFESKESKKLIG 283
                  +V  V+  A   A     ++   ++  D      +G R     +  +SKK+  
Sbjct: 306 VEGEAMNAVASVNKQAVVPANEAFAMKPITQVTADSSGLNEEGRRKKCLLKWSDSKKINR 365

Query: 284 IYADWLED 285
           IY DW++D
Sbjct: 366 IYGDWIDD 373

[Close]
BLAST of Cucsa.105270 vs. Swiss-Prot
Match: C3H12_ARATH (Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana GN=At1g32360 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.0e-12
Identity = 59/211 (27.96%), Postives = 85/211 (40.28%), Query Frame = 1 

Query: 107 CRLFQRRKKCAYGDQCRFLHEIPDKTRDSGSSSQNYEVSTVAFGHVMDRGSGFDQLEEVR 166
           C+ F   + C YG+ C FLH+   + R+S + S    +    +G     GSG   +    
Sbjct: 178 CKKFYTEEGCPYGESCTFLHDEASRNRESVAIS----LGPGGYGSGGGGGSGGGSVGGGG 237

Query: 167 SKVQTKVVVRG---------EIPKPLIAKSRPCYPWQTTGRCPYGAGCRFAHGEAELQKL 226
           S     V+  G         +I KP   K+R C  W+ TG CP+GA C FAHG AEL + 
Sbjct: 238 SSSNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHRF 297

Query: 227 EPCNASQRGSVG---------------GVSGTAT---------TTAAVEAGLRSSREIGT 285
                 + G  G               G+S T T           A+   G+   R    
Sbjct: 298 GGGLVEEEGKDGVSPNPDTKQTVQNPKGLSDTTTLLSPGVPHNADASYHTGVALQRASSA 357

[Close]
BLAST of Cucsa.105270 vs. Swiss-Prot
Match: C3H56_ORYSJ (Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica GN=Os08g0159800 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 9.9e-11
Identity = 38/110 (34.55%), Postives = 51/110 (46.36%), Query Frame = 1 

Query: 107 CRLFQRRKKCAYGDQCRFLHEIPDKTRDSGSSSQNYEVSTVAFGHVMDRGSGFDQLEEVR 166
           C+ F   + C YGD C FLH+   K R+S + S +  V           G G        
Sbjct: 175 CKKFYTDEGCPYGDACTFLHDEQSKARESVAISLSPSVGGGG-------GGGSYNSAAAA 234

Query: 167 SKVQTKVVVRGEIPKPLIAKSRPCYPWQTTGRCPYGAGCRFAHGEAELQK 217
           +   +     G + KP   K+R C  W+ TG CP+G+ C FAHG AEL K
Sbjct: 235 AASASAAAGNGPMQKPSNWKTRICNKWEMTGYCPFGSKCHFAHGAAELHK 277


HSP 2 Score: 33.1 bits (74), Expect = 6.0e+00
Identity = 15/34 (44.12%), Postives = 20/34 (58.82%), Query Frame = 1 

Query: 186 KSRPCYPWQTTGRCPYGAGCRFAHGEAELQKLEP 220
           K++ C  ++  G CPY   C FAHG  EL+K  P
Sbjct: 89  KTKLCCKFR-AGTCPYVTNCNFAHGMEELRKPPP 121

[Close]
BLAST of Cucsa.105270 vs. Swiss-Prot
Match: C3H28_ARATH (Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana GN=At2g35430 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.7e-07
Identity = 39/127 (30.71%), Postives = 57/127 (44.88%), Query Frame = 1 

Query: 176 RGEIPKPLIA---KSRPCYPWQTTGRCPYGAGCRFAHGEAELQKL--------------E 235
           RG + + L +   K+R C  WQTTG CP+G+ C FAHG +EL                  
Sbjct: 132 RGNVAQTLKSPNWKTRICNKWQTTGYCPFGSHCHFAHGPSELHTFGGGLVEGECKIGTSA 191

Query: 236 PCNASQRGSVGGVSGTATTTAAVEAGLRSSR-EIGTDCKNKGPRINQFFESKESKKLIGI 285
             +  QRG V       T T+ V  G+ S R       K  G R  + ++  +  K+  +
Sbjct: 192 TLDTKQRGQVD------TVTSLVSPGVSSQRTSSAVTQKPNGVRTQRKWKGPD--KISRV 250

[Close]
BLAST of Cucsa.105270 vs. TrEMBL
Match: A0A0A0KBW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G433210 PE=4 SV=1)

HSP 1 Score: 604.7 bits (1558), Expect = 5.6e-170
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1 

Query: 1   MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRPTMSGVVSSWRMPSNFGIPPWNNWNIGY 60
           MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRPTMSGVVSSWRMPSNFGIPPWNNWNIGY
Sbjct: 1   MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRPTMSGVVSSWRMPSNFGIPPWNNWNIGY 60

Query: 61  EHEFGRSYTPGFNDTRRMLPSGPGIEFREGQLSERWNVDNSNEMKVCRLFQRRKKCAYGD 120
           EHEFGRSYTPGFNDTRRMLPSGPGIEFREGQLSERWNVDNSNEMKVCRLFQRRKKCAYGD
Sbjct: 61  EHEFGRSYTPGFNDTRRMLPSGPGIEFREGQLSERWNVDNSNEMKVCRLFQRRKKCAYGD 120

Query: 121 QCRFLHEIPDKTRDSGSSSQNYEVSTVAFGHVMDRGSGFDQLEEVRSKVQTKVVVRGEIP 180
           QCRFLHEIPDKTRDSGSSSQNYEVSTVAFGHVMDRGSGFDQLEEVRSKVQTKVVVRGEIP
Sbjct: 121 QCRFLHEIPDKTRDSGSSSQNYEVSTVAFGHVMDRGSGFDQLEEVRSKVQTKVVVRGEIP 180

Query: 181 KPLIAKSRPCYPWQTTGRCPYGAGCRFAHGEAELQKLEPCNASQRGSVGGVSGTATTTAA 240
           KPLIAKSRPCYPWQTTGRCPYGAGCRFAHGEAELQKLEPCNASQRGSVGGVSGTATTTAA
Sbjct: 181 KPLIAKSRPCYPWQTTGRCPYGAGCRFAHGEAELQKLEPCNASQRGSVGGVSGTATTTAA 240

Query: 241 VEAGLRSSREIGTDCKNKGPRINQFFESKESKKLIGIYADWLED 285
           VEAGLRSSREIGTDCKNKGPRINQFFESKESKKLIGIYADWLED
Sbjct: 241 VEAGLRSSREIGTDCKNKGPRINQFFESKESKKLIGIYADWLED 284

[Close]
BLAST of Cucsa.105270 vs. TrEMBL
Match: F6HH72_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g04940 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.9e-22
Identity = 75/234 (32.05%), Postives = 113/234 (48.29%), Query Frame = 1 

Query: 67  SYTPGFNDTRRMLPSGPGIEFREGQLSER----WNVDNS--NEMKVCRLFQRRKKCAYGD 126
           ++  G  D R+  P+   +    G+  ER    W+ D    ++MK+C+ F   ++C YGD
Sbjct: 41  NFAHGMEDMRQPPPNWQELVNVGGREEERGTKIWDEDQRIIHKMKLCKKFYNGEECPYGD 100

Query: 127 QCRFLHEIPDKTRD-SGSSSQNYEVSTVAFGHVMDRGSGFDQLEEVRSKVQTKVV----V 186
           +C FLHE P K RD S    +++ +S    G  M+ GSG +    + S + +        
Sbjct: 101 RCNFLHEDPKKFRDDSARPRESFAISIGTTGPPMEHGSGSNLGSNLSSNLSSMNSGLDPF 160

Query: 187 RGEIPKPLIAKSRPCYPWQTTGRCPYGAGCRFAHGEAELQKLEPCNAS---QRGSVGGVS 246
           RG + KP   K++ C  W+TTG CP+G  C FAHG+AELQ               VG   
Sbjct: 161 RGNV-KPTYWKTKLCCKWETTGHCPFGEKCHFAHGQAELQMTGGGGGGGGWAEAEVGNTC 220

Query: 247 GTATTTAAVEAGLRSSREIGTDCKNKGPRINQ--FFESKESKKLIGIYADWLED 285
                  +V A + +  E+GT       R N+    +SK  KK+  IYADW++D
Sbjct: 221 SLPAKLPSVPANVSTPPELGTGAPINPERQNKKLLLQSKGFKKINRIYADWIDD 273

[Close]
BLAST of Cucsa.105270 vs. TrEMBL
Match: M5W9P8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008076mg PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.9e-22
Identity = 82/234 (35.04%), Postives = 114/234 (48.72%), Query Frame = 1 

Query: 67  SYTPGFNDTRRMLPSGPGI----EFREGQLSERWNVDNS--NEMKVCRLFQRRKKCAYGD 126
           +Y  G  D R   P+   +    E     LS  W+ D    + MK+C+ F   ++C YGD
Sbjct: 108 NYAHGIEDIRHPPPNWQELVSVREEDRPPLSGNWDDDQKIIHRMKLCKKFYNGEECPYGD 167

Query: 127 QCRFLHEIPDKTRDSGSS-SQNYEVSTVAFGHVMDRGSGFDQLEEVRSKVQTKVVVRGEI 186
           +C FLHE P K RD  S   +N  +S    G  +  GSG +  EE R  V T +      
Sbjct: 168 RCNFLHEDPAKFRDDISRFRENTAISIGTTGPSVVHGSGSNHSEENRL-VSTGMDTFRVN 227

Query: 187 PKPLIAKSRPCYPWQTTGRCPYGAGCRFAHGEAELQ---------KLEPCNASQRGSVGG 246
            KP+  K++ C  W+TTG+CP+G  C FAHG+AELQ          L     S +   G 
Sbjct: 228 MKPVYWKTKLCNKWETTGKCPFGEKCHFAHGQAELQVPGGRVEAEVLSSTPISTKPQAGP 287

Query: 247 VSGTATTTAAVEAGLRSSREIGTDCKNKGPRINQFFESKESKKLIGIYADWLED 285
           V+ ++TT  A+   L +S E G   K +        + K SKK+  IYADWL+D
Sbjct: 288 VNDSSTTAMAI---LPASNEEGGQGKKR------VLKWKGSKKINRIYADWLDD 331

[Close]
BLAST of Cucsa.105270 vs. TrEMBL
Match: A0A067KBJ1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13298 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.5e-21
Identity = 92/319 (28.84%), Postives = 131/319 (41.07%), Query Frame = 1 

Query: 10  EARGNWPLLP-----------------PPYPDPRNQSFYRPTMSGVVSSWRMPSNFGIPP 69
           +A G WP  P                 PPY  PRN          + S   +P+N  +  
Sbjct: 22  DAIGIWPQFPLNSNEQFDPHSQFEQHQPPYKRPRNSE--DNNSQSMNSRMPLPNNLPVNN 81

Query: 70  WNNWNIGYEHEF-------------GRSYTPGFNDTRRMLPS-------GPGIEFREGQL 129
               NI ++                  ++  G  D R+  P+       G G+   + + 
Sbjct: 82  KGTTNIFFKTRMCAKFRSGNCRNGENCNFAHGMQDLRQPPPNWQELVGVGGGVRGEDERP 141

Query: 130 SERWNVDNS--NEMKVCRLFQRRKKCAYGDQCRFLHEIPDKTRDS-GSSSQNYEVSTVAF 189
           S  W  D    ++MK+C+ F   ++C YGD+C FLHE P K RD  G   ++  +S    
Sbjct: 142 SGNWEDDQRIIHKMKLCKKFYNGEECPYGDRCNFLHEDPSKFRDDIGRFRESSAISIGTT 201

Query: 190 GHVMDRGSGFDQLEEVRSKVQTKV--VVRGEIPKPLIAKSRPCYPWQTTGRCPYGAGCRF 249
           G  M  GSG     EV   V   V    R    KP+  K++ C  W+TTG+CP+G  C F
Sbjct: 202 GQPMLHGSGGLNAPEVSKSVNNVVSDAFRVNDMKPVYWKTKLCTKWETTGQCPFGEKCHF 261

Query: 250 AHGEAELQKLEPCNASQRGSVGGVSGTATTTAAVEAG--LRSSREIGTDCKNKGPRINQF 285
           AHG+AELQ   P   ++ G VG    T T    + A     S     +    +G      
Sbjct: 262 AHGQAELQL--PGERAE-GEVGNAGCTLTKPPPIHANNICPSMTANVSSVIEEGQGKKCL 321

[Close]
BLAST of Cucsa.105270 vs. TrEMBL
Match: B9SEP0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0221060 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.6e-20
Identity = 95/330 (28.79%), Postives = 142/330 (43.03%), Query Frame = 1 

Query: 10  EARGNWPLLP---------------PPYPDPRNQSFYRPTMSGVVSSWRMPSNFGIPPWN 69
           +A G WP  P               PP+  PRN      +M           N+ +PP N
Sbjct: 22  DAIGIWPQFPMNSNEQFDPQFDHHQPPFKRPRNSEDNNQSM-----------NYRMPPPN 81

Query: 70  NW--NIGYEHEFGRS------------------YTPGFNDTRRMLPS-----GPGIEFRE 129
           N   N G  + F ++                  +  G  D R+  P+     G  +   E
Sbjct: 82  NLPINKGTTNIFFKTRMCAKFKTGSCRNGENCNFAHGMQDMRQPPPNWQELVGVVVRGEE 141

Query: 130 GQLSERWNVDNS--NEMKVCRLFQRRKKCAYGDQCRFLHEIPDKTRD-SGSSSQNYEVST 189
            + +  W+ D    ++MK+C+ F   ++C YGD+C FLHE P K RD +G   ++  +S 
Sbjct: 142 DRPAGNWDDDQRIIHKMKLCKKFYNGEQCPYGDRCNFLHEDPSKFRDDAGRFRESSAISI 201

Query: 190 VAFGHVMDRGSGFDQLEEVRSKVQTKVV--VRGEIPKPLIAKSRPCYPWQTTGRCPYGAG 249
                 M  GSG   + EV   V        RG + KP+  K++ C  W+TTG+CP+G  
Sbjct: 202 GTTAPPMMHGSGGLSVVEVNKPVNNAGADAYRGNM-KPVYWKTKLCTKWETTGQCPFGEK 261

Query: 250 CRFAHGEAELQKLEPCNASQRGSVGGV----------SGTATTTAAVEAGLRSSREIGTD 285
           C FAHG+AELQ        + G+ G +          +G+ + TA+V + L   R+ G  
Sbjct: 262 CHFAHGQAELQIPNGRAEGEVGNAGSILTKPPPILVTNGSPSMTASVPS-LVEERQ-GKK 321

[Close]
BLAST of Cucsa.105270 vs. TAIR10
Match: AT3G19360.1 (AT3G19360.1 Zinc finger (CCCH-type) family protein)

HSP 1 Score: 85.5 bits (210), Expect = 5.8e-17
Identity = 57/188 (30.32%), Postives = 85/188 (45.21%), Query Frame = 1 

Query: 104 MKVCRLFQRRKKCAYGDQCRFLHEIPDKTR-DSGS--SSQNYEVSTVAFGHVMDRGSGFD 163
           MK+CR F   ++C YGD+C F+HE   K R DSG    S    V   A     D  S   
Sbjct: 186 MKLCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSVISVGATAADQPSDTASNLI 245

Query: 164 QLEEVRSKVQTKVVVRGEIPKPLIAKSRPCYPWQTTGRCPYGAGCRFAHGEAEL-QKLEP 223
           ++    S      +  G + K +  K+R C  +  TG+CP+G  C FAHG+AEL   +  
Sbjct: 246 EVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQAELHNSVGR 305

Query: 224 CNASQRGSVGGVSGTATTTAAVEAGLRSSREIGTD---CKNKGPRINQFFESKESKKLIG 283
                  +V  V+  A   A     ++   ++  D      +G R     +  +SKK+  
Sbjct: 306 VEGEAMNAVASVNKQAVVPANEAFAMKPITQVTADSSGLNEEGRRKKCLLKWSDSKKINR 365

Query: 284 IYADWLED 285
           IY DW++D
Sbjct: 366 IYGDWIDD 373

[Close]
BLAST of Cucsa.105270 vs. TAIR10
Match: AT1G32360.1 (AT1G32360.1 Zinc finger (CCCH-type) family protein)

HSP 1 Score: 73.6 bits (179), Expect = 2.3e-13
Identity = 59/211 (27.96%), Postives = 85/211 (40.28%), Query Frame = 1 

Query: 107 CRLFQRRKKCAYGDQCRFLHEIPDKTRDSGSSSQNYEVSTVAFGHVMDRGSGFDQLEEVR 166
           C+ F   + C YG+ C FLH+   + R+S + S    +    +G     GSG   +    
Sbjct: 178 CKKFYTEEGCPYGESCTFLHDEASRNRESVAIS----LGPGGYGSGGGGGSGGGSVGGGG 237

Query: 167 SKVQTKVVVRG---------EIPKPLIAKSRPCYPWQTTGRCPYGAGCRFAHGEAELQKL 226
           S     V+  G         +I KP   K+R C  W+ TG CP+GA C FAHG AEL + 
Sbjct: 238 SSSNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHRF 297

Query: 227 EPCNASQRGSVG---------------GVSGTAT---------TTAAVEAGLRSSREIGT 285
                 + G  G               G+S T T           A+   G+   R    
Sbjct: 298 GGGLVEEEGKDGVSPNPDTKQTVQNPKGLSDTTTLLSPGVPHNADASYHTGVALQRASSA 357

[Close]
BLAST of Cucsa.105270 vs. TAIR10
Match: AT2G35430.1 (AT2G35430.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 56.2 bits (134), Expect = 3.8e-08
Identity = 39/127 (30.71%), Postives = 57/127 (44.88%), Query Frame = 1 

Query: 176 RGEIPKPLIA---KSRPCYPWQTTGRCPYGAGCRFAHGEAELQKL--------------E 235
           RG + + L +   K+R C  WQTTG CP+G+ C FAHG +EL                  
Sbjct: 132 RGNVAQTLKSPNWKTRICNKWQTTGYCPFGSHCHFAHGPSELHTFGGGLVEGECKIGTSA 191

Query: 236 PCNASQRGSVGGVSGTATTTAAVEAGLRSSR-EIGTDCKNKGPRINQFFESKESKKLIGI 285
             +  QRG V       T T+ V  G+ S R       K  G R  + ++  +  K+  +
Sbjct: 192 TLDTKQRGQVD------TVTSLVSPGVSSQRTSSAVTQKPNGVRTQRKWKGPD--KISRV 250

[Close]
BLAST of Cucsa.105270 vs. NCBI nr
Match: gi|449436118|ref|XP_004135841.1| (PREDICTED: zinc finger CCCH domain-containing protein 39-like isoform X1 [Cucumis sativus])

HSP 1 Score: 604.7 bits (1558), Expect = 8.0e-170
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1 

Query: 1   MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRPTMSGVVSSWRMPSNFGIPPWNNWNIGY 60
           MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRPTMSGVVSSWRMPSNFGIPPWNNWNIGY
Sbjct: 1   MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRPTMSGVVSSWRMPSNFGIPPWNNWNIGY 60

Query: 61  EHEFGRSYTPGFNDTRRMLPSGPGIEFREGQLSERWNVDNSNEMKVCRLFQRRKKCAYGD 120
           EHEFGRSYTPGFNDTRRMLPSGPGIEFREGQLSERWNVDNSNEMKVCRLFQRRKKCAYGD
Sbjct: 61  EHEFGRSYTPGFNDTRRMLPSGPGIEFREGQLSERWNVDNSNEMKVCRLFQRRKKCAYGD 120

Query: 121 QCRFLHEIPDKTRDSGSSSQNYEVSTVAFGHVMDRGSGFDQLEEVRSKVQTKVVVRGEIP 180
           QCRFLHEIPDKTRDSGSSSQNYEVSTVAFGHVMDRGSGFDQLEEVRSKVQTKVVVRGEIP
Sbjct: 121 QCRFLHEIPDKTRDSGSSSQNYEVSTVAFGHVMDRGSGFDQLEEVRSKVQTKVVVRGEIP 180

Query: 181 KPLIAKSRPCYPWQTTGRCPYGAGCRFAHGEAELQKLEPCNASQRGSVGGVSGTATTTAA 240
           KPLIAKSRPCYPWQTTGRCPYGAGCRFAHGEAELQKLEPCNASQRGSVGGVSGTATTTAA
Sbjct: 181 KPLIAKSRPCYPWQTTGRCPYGAGCRFAHGEAELQKLEPCNASQRGSVGGVSGTATTTAA 240

Query: 241 VEAGLRSSREIGTDCKNKGPRINQFFESKESKKLIGIYADWLED 285
           VEAGLRSSREIGTDCKNKGPRINQFFESKESKKLIGIYADWLED
Sbjct: 241 VEAGLRSSREIGTDCKNKGPRINQFFESKESKKLIGIYADWLED 284

[Close]
BLAST of Cucsa.105270 vs. NCBI nr
Match: gi|659122336|ref|XP_008461087.1| (PREDICTED: zinc finger CCCH domain-containing protein 39-like [Cucumis melo])

HSP 1 Score: 543.1 bits (1398), Expect = 2.9e-151
Identity = 258/284 (90.85%), Postives = 262/284 (92.25%), Query Frame = 1 

Query: 1   MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRPTMSGVVSSWRMPSNFGIPPWNNWNIGY 60
           MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYR TMSG VSSWRMPSNFGIPPWNNWNIGY
Sbjct: 1   MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIGY 60

Query: 61  EHEFGRSYTPGFNDTRRMLPSGPGIEFREGQLSERWNVDNSNEMKVCRLFQRRKKCAYGD 120
           EHE GRSY PGFNDT RMLPS PGIEF EGQLSERWNVD+SNEMKVCRLFQRRKKCAYGD
Sbjct: 61  EHELGRSYRPGFNDTHRMLPSRPGIEFHEGQLSERWNVDDSNEMKVCRLFQRRKKCAYGD 120

Query: 121 QCRFLHEIPDKTRDSGSSSQNYEVSTVAFGHVMDRGSGFDQLEEVRSKVQTKVVVRGEIP 180
           QCRFLHEIP+KTRDSGSSSQNYEV          R SGFDQLEEVRSKVQTKVVVRGEIP
Sbjct: 121 QCRFLHEIPEKTRDSGSSSQNYEV----------RRSGFDQLEEVRSKVQTKVVVRGEIP 180

Query: 181 KPLIAKSRPCYPWQTTGRCPYGAGCRFAHGEAELQKLEPCNASQRGSVGGVSGTATTTAA 240
           KPLI K RPCYPWQTTGRCPYGAGCRFAHGEAELQKLEPC+ASQRGSVGGVS TATTTA 
Sbjct: 181 KPLIGKPRPCYPWQTTGRCPYGAGCRFAHGEAELQKLEPCSASQRGSVGGVSATATTTAP 240

Query: 241 VEAGLRSSREIGTDCKNKGPRINQFFESKESKKLIGIYADWLED 285
           VEAGLRSS+EIGTDCKNKGPRINQFFESKESKKLIGIYADWLED
Sbjct: 241 VEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED 274

[Close]
BLAST of Cucsa.105270 vs. NCBI nr
Match: gi|778729122|ref|XP_011659534.1| (PREDICTED: uncharacterized protein LOC101205166 isoform X2 [Cucumis sativus])

HSP 1 Score: 464.2 bits (1193), Expect = 1.7e-127
Identity = 214/218 (98.17%), Postives = 215/218 (98.62%), Query Frame = 1 

Query: 1   MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRPTMSGVVSSWRMPSNFGIPPWNNWNIGY 60
           MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRPTMSGVVSSWRMPSNFGIPPWNNWNIGY
Sbjct: 1   MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRPTMSGVVSSWRMPSNFGIPPWNNWNIGY 60

Query: 61  EHEFGRSYTPGFNDTRRMLPSGPGIEFREGQLSERWNVDNSNEMKVCRLFQRRKKCAYGD 120
           EHEFGRSYTPGFNDTRRMLPSGPGIEFREGQLSERWNVDNSNEMKVCRLFQRRKKCAYGD
Sbjct: 61  EHEFGRSYTPGFNDTRRMLPSGPGIEFREGQLSERWNVDNSNEMKVCRLFQRRKKCAYGD 120

Query: 121 QCRFLHEIPDKTRDSGSSSQNYEVSTVAFGHVMDRGSGFDQLEEVRSKVQTKVVVRGEIP 180
           QCRFLHEIPDKTRDSGSSSQNYEVSTVAFGHVMDRGSGFDQLEEVRSKVQTKVVVRGEIP
Sbjct: 121 QCRFLHEIPDKTRDSGSSSQNYEVSTVAFGHVMDRGSGFDQLEEVRSKVQTKVVVRGEIP 180

Query: 181 KPLIAKSRPCYPWQTTGRCPYGAGCRFAHGEAELQKLE 219
           KPLIAKSRPCYPWQTTGRCPYGAGCRFAHGEAE +  E
Sbjct: 181 KPLIAKSRPCYPWQTTGRCPYGAGCRFAHGEAENRTTE 218

[Close]
BLAST of Cucsa.105270 vs. NCBI nr
Match: gi|719981103|ref|XP_010250023.1| (PREDICTED: zinc finger CCCH domain-containing protein 39-like [Nelumbo nucifera])

HSP 1 Score: 125.9 bits (315), Expect = 1.1e-25
Identity = 89/279 (31.90%), Postives = 137/279 (49.10%), Query Frame = 1 

Query: 16  PLLPPPYPDPRNQSFYRPTMSGVVSSWRMPSNF--GIPPWNNWNIGYEHEFGRSYTPGFN 75
           P +PPP P P N+   R     +    R+ + F  G  P+ + N  + H        G  
Sbjct: 69  PRMPPPNP-PANKGISR-----IFFKTRLCARFRAGTCPYGS-NCNFAH--------GIE 128

Query: 76  DTRRMLPSGPGIEFREGQLSER----WNVDNS--NEMKVCRLFQRRKKCAYGDQCRFLHE 135
           D R+  P+   I        +R    W+ D     ++K+C+ F   ++C YGD+C FLHE
Sbjct: 129 DIRKPPPNWQEIVAAHAHEEDRGAGNWDEDQRIITKLKLCKKFYNGEECPYGDRCNFLHE 188

Query: 136 IPDKTR-DSGSSSQNYEVSTVAFGHVMDRGSGFDQLEEVRSKVQTKVVVRGEIPKPLIAK 195
            P K R DSG   ++  +S    G   D G+GFDQ +E  S   + + V     KP+  K
Sbjct: 189 DPSKFREDSGRFRESSAISIGTIGSPGDNGAGFDQ-QEGHSSSNSSLDVNRVNAKPVFWK 248

Query: 196 SRPCYPWQTTGRCPYGAGCRFAHGEAELQKLEPCNASQRGSVGGVSGTATTTAAVEAGLR 255
           +R C  W+TTG+CP+G  C FAHG+AELQK    N ++ G+ GG S +      ++    
Sbjct: 249 TRICNKWETTGQCPFGDKCHFAHGQAELQKFGGQNEAESGNAGG-SLSKPLPNPIQDVSP 308

Query: 256 SSREIGTDCKNKGPRINQ-FFESKESKKLIGIYADWLED 285
           +   +GT  K +  +  +   + K  +K+  IYADW++D
Sbjct: 309 TKTGMGTTSKQQQVQSKKCLLKWKGPEKINRIYADWIDD 330

[Close]
BLAST of Cucsa.105270 vs. NCBI nr
Match: gi|719994995|ref|XP_010254349.1| (PREDICTED: zinc finger CCCH domain-containing protein 39-like isoform X1 [Nelumbo nucifera])

HSP 1 Score: 115.2 bits (287), Expect = 1.9e-22
Identity = 85/276 (30.80%), Postives = 128/276 (46.38%), Query Frame = 1 

Query: 21  PYPDPRNQSFYRPTMSGVVSSW---RMPSNF--GIPPWNNWNIGYEHEFGRSYTPGFNDT 80
           P P+PR      P   G+   +   R+ S F  G  P+ + N  + H        G +D 
Sbjct: 63  PLPNPRVLPPNPPVNKGISRIFFKTRLCSRFKAGTCPYGS-NCNFAH--------GIDDI 122

Query: 81  RRMLPSGPGI----EFREGQLSERWNVDNS--NEMKVCRLFQRRKKCAYGDQCRFLHEIP 140
           R+  P+   I       E + +  W+ D    +++K+C+ F   ++C YG++C FLHE P
Sbjct: 123 RKPPPNWQEIVAAHAHEEDRAAGNWDEDQRIISKLKLCKKFCSGEECPYGERCNFLHEDP 182

Query: 141 DKTR-DSGSSSQNYEVSTVAFGHVMDRGSGFDQLEEVRSKVQTKVVVRGEIPKPLIAKSR 200
            K R DSG   ++  +S    G     G+G DQ +EV     +   V    PKP+  K+R
Sbjct: 183 SKFREDSGRFRESSAISIGTTGSPGGNGTGVDQ-QEVNGSGNSSFDVNRMNPKPVFWKTR 242

Query: 201 PCYPWQTTGRCPYGAGCRFAHGEAELQKLEPCNASQRGSVGGVSGTATTTAAVEAGLRSS 260
            C  W+TTG CP+G  C FAHG+AELQK       + G+ G          A +    +S
Sbjct: 243 ICNKWETTGHCPFGEKCHFAHGQAELQKYGGHTEVESGNAGTFLPKPLPNLAQDVS-PTS 302

Query: 261 REIGTDCKNKGPRINQFFESKESKKLIGIYADWLED 285
             IG   K +        + K  +K+  IYADW++D
Sbjct: 303 TVIGATSKQQVQGKKCLLKWKGPEKISRIYADWIDD 327

The following BLAST results are available for this feature:
BLAST of Cucsa.105270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
C3H39_ARATH1.0e-1530.32Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana GN=At3g193... [more]
C3H12_ARATH4.0e-1227.96Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana GN=At1g323... [more]
C3H56_ORYSJ9.9e-1134.55Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica GN... [more]
C3H28_ARATH6.7e-0730.71Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana GN=At2g354... [more]
BLAST of Cucsa.105270 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBW4_CUCSA5.6e-170100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G433210 PE=4 SV=1[more]
F6HH72_VITVI3.9e-2232.05Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g04940 PE=4 SV=... [more]
M5W9P8_PRUPE3.9e-2235.04Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008076mg PE=4 SV=1[more]
A0A067KBJ1_JATCU2.5e-2128.84Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13298 PE=4 SV=1[more]
B9SEP0_RICCO1.6e-2028.79Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0221060 PE=4 SV=1[more]
BLAST of Cucsa.105270 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G19360.15.8e-1730.32 Zinc finger (CCCH-type) family protein[more]
AT1G32360.12.3e-1327.96 Zinc finger (CCCH-type) family protein[more]
AT2G35430.13.8e-0830.71 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
BLAST of Cucsa.105270 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449436118|ref|XP_004135841.1|8.0e-170100.00PREDICTED: zinc finger CCCH domain-containing protein 39-like isoform X1 [Cucumi... [more]
gi|659122336|ref|XP_008461087.1|2.9e-15190.85PREDICTED: zinc finger CCCH domain-containing protein 39-like [Cucumis melo][more]
gi|778729122|ref|XP_011659534.1|1.7e-12798.17PREDICTED: uncharacterized protein LOC101205166 isoform X2 [Cucumis sativus][more]
gi|719981103|ref|XP_010250023.1|1.1e-2531.90PREDICTED: zinc finger CCCH domain-containing protein 39-like [Nelumbo nucifera][more]
gi|719994995|ref|XP_010254349.1|1.9e-2230.80PREDICTED: zinc finger CCCH domain-containing protein 39-like isoform X1 [Nelumb... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.105270.1Cucsa.105270.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeGENE3DG3DSA:4.10.1000.10coord: 185..216
score: 4.4E-13coord: 105..128
score: 3.
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 186..211
score: 3.6E-7coord: 105..126
score: 6.
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 186..211
score: 4.3E-4coord: 101..128
score: 1.
IPR000571Zinc finger, CCCH-typePROFILEPS50103ZF_C3H1coord: 184..212
score: 14.371coord: 101..129
score: 14
IPR000571Zinc finger, CCCH-typeunknownSSF90229CCCH zinc fingercoord: 182..215
score: 7.72E-9coord: 103..130
score: 7.0
NoneNo IPR availablePANTHERPTHR12547CCCH ZINC FINGER/TIS11-RELATEDcoord: 71..284
score: 1.9
NoneNo IPR availablePANTHERPTHR12547:SF70ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 39coord: 71..284
score: 1.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.105270Cla016728Watermelon (97103) v1cgywmB145
Cucsa.105270Cla015383Watermelon (97103) v1cgywmB142
Cucsa.105270Csa7G433210Cucumber (Chinese Long) v2cgycuB126
Cucsa.105270MELO3C023403Melon (DHL92) v3.5.1cgymeB133
Cucsa.105270ClCG09G002730Watermelon (Charleston Gray)cgywcgB141
Cucsa.105270CSPI07G20790Wild cucumber (PI 183967)cgycpiB127
Cucsa.105270CSPI02G01550Wild cucumber (PI 183967)cgycpiB124
Cucsa.105270CmaCh17G008450Cucurbita maxima (Rimu)cgycmaB0237
Cucsa.105270CmaCh08G006720Cucurbita maxima (Rimu)cgycmaB0240
Cucsa.105270CmaCh05G013080Cucurbita maxima (Rimu)cgycmaB0239
Cucsa.105270CmoCh08G006370Cucurbita moschata (Rifu)cgycmoB0239
Cucsa.105270CmoCh17G008170Cucurbita moschata (Rifu)cgycmoB0236
Cucsa.105270Lsi11G003000Bottle gourd (USVL1VR-Ls)cgylsiB132
Cucsa.105270Lsi02G027280Bottle gourd (USVL1VR-Ls)cgylsiB133
Cucsa.105270Cp4.1LG17g05820Cucurbita pepo (Zucchini)cgycpeB0231
Cucsa.105270Cp4.1LG12g07830Cucurbita pepo (Zucchini)cgycpeB0229
Cucsa.105270MELO3C023403.2Melon (DHL92) v3.6.1cgymedB133
Cucsa.105270CsaV3_7G032610Cucumber (Chinese Long) v3cgycucB131
Cucsa.105270CsaV3_2G002700Cucumber (Chinese Long) v3cgycucB128
Cucsa.105270Cla97C11G209340Watermelon (97103) v2cgywmbB137
Cucsa.105270Cla97C09G164870Watermelon (97103) v2cgywmbB141
Cucsa.105270Bhi09G000039Wax gourdcgywgoB162
Cucsa.105270Carg18826Silver-seed gourdcarcgyB0837
Cucsa.105270Carg09572Silver-seed gourdcarcgyB1144
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.105270Melon (DHL92) v3.6.1cgymedB135
Cucsa.105270Silver-seed gourdcarcgyB0152
Cucsa.105270Silver-seed gourdcarcgyB0238
Cucsa.105270Cucumber (Chinese Long) v3cgycucB129
Cucsa.105270Watermelon (97103) v2cgywmbB139
Cucsa.105270Watermelon (97103) v2cgywmbB140
Cucsa.105270Wax gourdcgywgoB160
Cucsa.105270Cucumber (Gy14) v1cgycgyB032
Cucsa.105270Cucumber (Gy14) v1cgycgyB053
Cucsa.105270Cucurbita maxima (Rimu)cgycmaB0236
Cucsa.105270Cucurbita maxima (Rimu)cgycmaB0238
Cucsa.105270Cucurbita moschata (Rifu)cgycmoB0234
Cucsa.105270Cucurbita moschata (Rifu)cgycmoB0235
Cucsa.105270Cucurbita moschata (Rifu)cgycmoB0237
Cucsa.105270Wild cucumber (PI 183967)cgycpiB125
Cucsa.105270Cucumber (Chinese Long) v2cgycuB123
Cucsa.105270Cucumber (Chinese Long) v2cgycuB124
Cucsa.105270Melon (DHL92) v3.5.1cgymeB135
Cucsa.105270Watermelon (Charleston Gray)cgywcgB145
Cucsa.105270Watermelon (Charleston Gray)cgywcgB142
Cucsa.105270Watermelon (Charleston Gray)cgywcgB144
Cucsa.105270Watermelon (97103) v1cgywmB143
Cucsa.105270Cucurbita pepo (Zucchini)cgycpeB0230
Cucsa.105270Cucurbita pepo (Zucchini)cgycpeB0232
Cucsa.105270Cucurbita pepo (Zucchini)cgycpeB0233
Cucsa.105270Bottle gourd (USVL1VR-Ls)cgylsiB135
Cucsa.105270Bottle gourd (USVL1VR-Ls)cgylsiB136