CmoCh08G006370 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh08G006370
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Zinc finger CCCH domain-containing protein 39
Location	Cmo_Chr08 : 4144797 .. 4146903 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTCGGAAGGCGAAGCGACATACTCAAAATCGAAGCGGCTACTTCCGATTATGATGGGAATCCGTCGTTGAATCTCACGGCGGAGGCCTTTCATCTTCTCCGCTGTGGTTTCCGATCAACGCCTAGGGTTTAACTCTGTAAATATTGTACAAATGTCTCTTATACCTGTCAATTAATTGGATGTATCATTTGCCATTTCAAATTTCATCGATTTCTTCAAAACTTGTGGACTTGGGGCTTGGTGTCTCTTCTGGAAGTTTTGGACAGTTCTTCATCAGGTATCTCTCTGAGTTTTCCATTCTTTTGCGCCAAATTTGGACTCCTCAACTTTAGCTGCATGTGTCAATTTTTTATTCGCTTCCGATTTGAAGATATTGACAATGTACAGAGATTTAAGCGATTTGTCTATTGTTACTTTTGGAAAAGAAATGTTGCTTAGAACCTACTGTTTTTATCAGTTCAAAGAATTTGAAACTTGAAATTGGATGGTTTGGCCCTTGAAATGAGTGATCCTTATCCTTTTCACCAAGTTACTCCTCCAGACCATGAGGCTCGTGGCGTTTGGCCGCCATTGCGTCCTCCGCCATTGCCTCCTCGATATACTGTTGGTCGATTCCCATCATTTTATCAGCCTACGATGTCGGAAATTGTACCGAGTAGGGTAATGCCTTCAAATTTTGAGATTCCACAATGGAACAATGTGCACATTGGATTACATGACAATGAGTTGGAGTGGAGATATGCACTTGCTTCTAATGATCATACTCGTGGATGGTTACCTTCTTGGCGAGGAATTGAATTCCATGAAAATCGATTACCAGAGTGTCCGATTGTTAACAGTCGGACTGGAATGTCGACTGAAATGAAAGTTTGCAGACAATTCCAACGTAGGGGGAAATGTGCATATGGTGATCAGTGTCGTTTCCTTCATAAAATTCCTGAGAACACTAAGGATTTTGGCTCCTCCAGCCAGAACCATGAGGTTAGAGCAGTAGCTTCTGGTCATGTTATGGATGGAAAAAGTATGTTTGATCAATTTGAAGAAGTCAGATCAAAAGTACAAACGAAAATTGTTGCCCGCAGTGAGATTCCAATGCCTGTAAATTGCAAAACAAGGCTCTGTTACCTCTGGCAGACAACTGGTCACTGCTCATATGGGGAGGTTTGTCGCTTCGCTCATGGAGAAGCAGGTATTTACAGCCTTTGAGTCTACTAATCTCTTTCGTTTCCAGTACCATGTCATATGCTTTCAAGTGATTTATCTATTTTCTTTTCCCATTTTCTTATCCATGCAAGTTATTTCATAAATTACTTAAACTTTTTGGGATAAATAACCTGCCTTGATTCAAATGAATCCTCTTTCCTTTTGAGTTTTAATAACGAGGTGAGAGATTCGAATGTTTGACCGCTTGGTAAAGAATATATGCCTTAAATCTTAGCCTTTTTGTTGGGTGATTAACTTTTGTAGGGGGAAGGGGTTCTATTTGCATAATGAAAATGGTGGGCTATATAGACTTTGAGACCTTTCTAAGCATAGGTTAGATATTGTTCCTCAGAACATGGAAACATCAAACGTTGATTACTTAACCATACATATAAATGAACATTCTAACACTGTAAGATGCAATGTCAACCATGTGGATATACTCATTCATAAATGGTGATTGACGTGTTCATGAAATCAAAACCTGGTTATTGCCAAACTACATGCATTGATATTGCCCTTGTCTTCTTTGTTTTGGGGGGAAAATAGAATTACAGAAGCTCGAGTCGTGCAGTACATCAGAACGTGGCAGAGTAGGTGGAGCCTCTGCAACAACTAAAGCTGCTGCCGCGGCTGGATTAAGGTGCAGCAGAGGAATTGGAACCGACTGTAAGAATAAAGGATCATCAAGAATGAAGCAACTCTTTAAATCAAAGGAGCATAAGAAGTTGATTGGCATTTACGCTGACTGGCTTGAGAATTGAGTATTCTGCATGACTTGCAGTACAAAGATTTGACCAAATACTACTGGGGCGTGTTCCAATTCTCACAAGTGGCTGAGAACATTAAGGTTCTTCTAGAACCCCCCAAGTGCATTTTGACATTTAAATGAATATAGGAAAA

mRNA sequence

AGTCGGAAGGCGAAGCGACATACTCAAAATCGAAGCGGCTACTTCCGATTATGATGGGAATCCGTCGTTGAATCTCACGGCGGAGGCCTTTCATCTTCTCCGCTGTGGTTTCCGATCAACGCCTAGGGTTTAACTCTGTAAATATTGTACAAATGTCTCTTATACCTGTCAATTAATTGGATGTATCATTTGCCATTTCAAATTTCATCGATTTCTTCAAAACTTGTGGACTTGGGGCTTGGTGTCTCTTCTGGAAGTTTTGGACAGTTCTTCATCAGGTATCTCTCTGAGTTTTCCATTCTTTTGCGCCAAATTTGGACTCCTCAACTTTAGCTGCATGTGTCAATTTTTTATTCGCTTCCGATTTGAAGATATTGACAATGTACAGAGATTTAAGCGATTTGTCTATTGTTACTTTTGGAAAAGAAATGTTGCTTAGAACCTACTGTTTTTATCAGTTCAAAGAATTTGAAACTTGAAATTGGATGGTTTGGCCCTTGAAATGAGTGATCCTTATCCTTTTCACCAAGTTACTCCTCCAGACCATGAGGCTCGTGGCGTTTGGCCGCCATTGCGTCCTCCGCCATTGCCTCCTCGATATACTGTTGGTCGATTCCCATCATTTTATCAGCCTACGATGTCGGAAATTGTACCGAGTAGGGTAATGCCTTCAAATTTTGAGATTCCACAATGGAACAATGTGCACATTGGATTACATGACAATGAGTTGGAGTGGAGATATGCACTTGCTTCTAATGATCATACTCGTGGATGGTTACCTTCTTGGCGAGGAATTGAATTCCATGAAAATCGATTACCAGAGTGTCCGATTGTTAACAGTCGGACTGGAATGTCGACTGAAATGAAAGTTTGCAGACAATTCCAACGTAGGGGGAAATGTGCATATGGTGATCAGTGTCGTTTCCTTCATAAAATTCCTGAGAACACTAAGGATTTTGGCTCCTCCAGCCAGAACCATGAGGTTAGAGCAGTAGCTTCTGGTCATGTTATGGATGGAAAAAGTATGTTTGATCAATTTGAAGAAGTCAGATCAAAAGTACAAACGAAAATTGTTGCCCGCAGTGAGATTCCAATGCCTGTAAATTGCAAAACAAGGCTCTGTTACCTCTGGCAGACAACTGGTCACTGCTCATATGGGGAGGTTTGTCGCTTCGCTCATGGAGAAGCAGAATTACAGAAGCTCGAGTCGTGCAGTACATCAGAACGTGGCAGAGTAGGTGGAGCCTCTGCAACAACTAAAGCTGCTGCCGCGGCTGGATTAAGGTGCAGCAGAGGAATTGGAACCGACTGTAAGAATAAAGGATCATCAAGAATGAAGCAACTCTTTAAATCAAAGGAGCATAAGAAGTTGATTGGCATTTACGCTGACTGGCTTGAGAATTGAGTATTCTGCATGACTTGCAGTACAAAGATTTGACCAAATACTACTGGGGCGTGTTCCAATTCTCACAAGTGGCTGAGAACATTAAGGTTCTTCTAGAACCCCCCAAGTGCATTTTGACATTTAAATGAATATAGGAAAA

Coding sequence (CDS)

ATGAGTGATCCTTATCCTTTTCACCAAGTTACTCCTCCAGACCATGAGGCTCGTGGCGTTTGGCCGCCATTGCGTCCTCCGCCATTGCCTCCTCGATATACTGTTGGTCGATTCCCATCATTTTATCAGCCTACGATGTCGGAAATTGTACCGAGTAGGGTAATGCCTTCAAATTTTGAGATTCCACAATGGAACAATGTGCACATTGGATTACATGACAATGAGTTGGAGTGGAGATATGCACTTGCTTCTAATGATCATACTCGTGGATGGTTACCTTCTTGGCGAGGAATTGAATTCCATGAAAATCGATTACCAGAGTGTCCGATTGTTAACAGTCGGACTGGAATGTCGACTGAAATGAAAGTTTGCAGACAATTCCAACGTAGGGGGAAATGTGCATATGGTGATCAGTGTCGTTTCCTTCATAAAATTCCTGAGAACACTAAGGATTTTGGCTCCTCCAGCCAGAACCATGAGGTTAGAGCAGTAGCTTCTGGTCATGTTATGGATGGAAAAAGTATGTTTGATCAATTTGAAGAAGTCAGATCAAAAGTACAAACGAAAATTGTTGCCCGCAGTGAGATTCCAATGCCTGTAAATTGCAAAACAAGGCTCTGTTACCTCTGGCAGACAACTGGTCACTGCTCATATGGGGAGGTTTGTCGCTTCGCTCATGGAGAAGCAGAATTACAGAAGCTCGAGTCGTGCAGTACATCAGAACGTGGCAGAGTAGGTGGAGCCTCTGCAACAACTAAAGCTGCTGCCGCGGCTGGATTAAGGTGCAGCAGAGGAATTGGAACCGACTGTAAGAATAAAGGATCATCAAGAATGAAGCAACTCTTTAAATCAAAGGAGCATAAGAAGTTGATTGGCATTTACGCTGACTGGCTTGAGAATTGA

Homology

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BLAST of CmoCh08G006370 vs. Swiss-Prot
Match: C3H39_ARATH (Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana GN=At3g19360 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 5.6e-12
Identity = 61/219 (27.85%), Postives = 96/219 (43.84%), Query Frame = 1


Query: 109 PIVNSR----TGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAV 168
           P+VN+       +   MK+CR+F    +C YGD+C F+H+     ++     +   V +V
Sbjct: 170 PVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSVISV 229

Query: 169 ASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMP-----------VNCKTRLCYLWQTT 228
                  G +  DQ  +  S +  ++  +  IP+P           V  KTRLC  +  T
Sbjct: 230 -------GATAADQPSDTASNL-IEVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDIT 289

Query: 229 GHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGAS----------ATTKAAAAAGLRCS 288
           G C +G+ C FAHG+AEL        +  GRV G +          A   A  A  ++  
Sbjct: 290 GQCPFGDKCHFAHGQAELH-------NSVGRVEGEAMNAVASVNKQAVVPANEAFAMKPI 349

Query: 289 RGIGTDCK--NKGSSRMKQLFKSKEHKKLIGIYADWLEN 301
             +  D    N+   R K L K  + KK+  IY DW+++
Sbjct: 350 TQVTADSSGLNEEGRRKKCLLKWSDSKKINRIYGDWIDD 373

[Close]

BLAST of CmoCh08G006370 vs. Swiss-Prot
Match: C3H12_ARATH (Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana GN=At1g32360 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.0e-10
Identity = 44/179 (24.58%), Postives = 74/179 (41.34%), Query Frame = 1


Query: 78  WRYALASNDHTRGW---LPSWRGIEF--HENRLPECPIVNSRTGMSTEMKVCRQFQRRGK 137
           W+  +A+++  R      P+   +E    E ++P      + +G S + + C++F     
Sbjct: 127 WQEIVAAHEEERSGGMGTPTVSVVEIPREEFQIPSLVSSTAESGRSFKGRHCKKFYTEEG 186

Query: 138 CAYGDQCRFLHKIPENTKD-----FGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQ 197
           C YG+ C FLH      ++      G           + G  + G         +     
Sbjct: 187 CPYGESCTFLHDEASRNRESVAISLGPGGYGSGGGGGSGGGSVGGGGSSSNVVVLGGGGG 246

Query: 198 TKIVARSEIPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVG 247
           +   +  +I  P N KTR+C  W+ TG+C +G  C FAHG AEL +       E G+ G
Sbjct: 247 SGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHRFGGGLVEEEGKDG 305

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BLAST of CmoCh08G006370 vs. Swiss-Prot
Match: C3H56_ORYSJ (Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica GN=Os08g0159800 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 6.8e-10
Identity = 54/210 (25.71%), Postives = 84/210 (40.00%), Query Frame = 1


Query: 115 TGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKS 174
           +G + + + C++F     C YGD C FLH            S+  E  A++    + G  
Sbjct: 166 SGRAYKGRHCKKFYTDEGCPYGDACTFLHD---------EQSKARESVAISLSPSVGGGG 225

Query: 175 MFDQFEEVRSKVQTKIVARSEIPM--PVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQ 234
               +    +   +   A    PM  P N KTR+C  W+ TG+C +G  C FAHG AEL 
Sbjct: 226 GGGSYNSAAAAAASASAAAGNGPMQKPSNWKTRICNKWEMTGYCPFGSKCHFAHGAAELH 285

Query: 235 KL-----------ESCSTSERGRVGGASATTKAAAAA------------GLRCSRGIGTD 294
           K             + +   +  V  A A  + AAA+            G++  R   T 
Sbjct: 286 KYGGGLVDIDSRDAAATPDSKQAVVSAKAPAETAAASTTVLPHADVYHLGVQAQR--STI 345

Query: 295 CKNKGSSRMKQLFKSKEHKKLIGIYADWLE 300
              +     + + K K   K+  IY DW++
Sbjct: 346 AGQRSGQVQRPIQKWKGPDKISRIYGDWID 364

[Close]

BLAST of CmoCh08G006370 vs. Swiss-Prot
Match: C3H28_ARATH (Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana GN=At2g35430 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.1e-07
Identity = 61/248 (24.60%), Postives = 98/248 (39.52%), Query Frame = 1


Query: 85  NDHTRGWLPSWRGIEFHENRLPECPIVNSRTGMSTEM-------KVCRQFQRRGKCAYG- 144
           +D++R W  +  G E         P   +R+  S+E+       K+C +F R G C Y  
Sbjct: 39  DDYSRVWAINSDGAE--------SPSKKTRSSSSSEIGKSFFKTKLCFKF-RAGTCPYSA 98

Query: 145 DQCRFLHKI---------PENTKD-FGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKV 204
             C F H           P N ++    +S+N E  AV+ G               R  V
Sbjct: 99  SSCHFAHSAEELRLPPPPPPNWQETVTEASRNRESFAVSLGP--------------RGNV 158

Query: 205 QTKIVARSEIPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKL------------ 264
              + +        N KTR+C  WQTTG+C +G  C FAHG +EL               
Sbjct: 159 AQTLKSP-------NWKTRICNKWQTTGYCPFGSHCHFAHGPSELHTFGGGLVEGECKIG 218

Query: 265 --ESCSTSERGRVGGASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIG 301
              +  T +RG+V     T  +  + G+   R      +     R ++ +K  +  K+  
Sbjct: 219 TSATLDTKQRGQVD----TVTSLVSPGVSSQRTSSAVTQKPNGVRTQRKWKGPD--KISR 250

[Close]

BLAST of CmoCh08G006370 vs. Swiss-Prot
Match: C3H14_ORYSJ (Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica GN=Os02g0194200 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.9e-06
Identity = 34/121 (28.10%), Postives = 49/121 (40.50%), Query Frame = 1


Query: 114 RTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQ-NHEVRAVASGHVMDG 173
           +TG+ ++ K C +F     C +G+ C FLH  P   +     +       A   G +  G
Sbjct: 29  QTGVGSKSKPCTKFFSTSGCPFGEGCHFLHHFPGGYQAVAKMTNLGGPAIAPPPGRMPMG 88

Query: 174 KSMFDQFEEVRSKVQTKIVARSEIPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQ 233
            ++ D                   P     KTRLC  + T   C +G+ C FAHGE EL 
Sbjct: 89  NAVPDG------------------PPTPTVKTRLCNKYNTAEGCKWGDKCHFAHGERELG 131

[Close]

BLAST of CmoCh08G006370 vs. TrEMBL
Match: A0A0A0KBW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G433210 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 3.1e-86
Identity = 184/287 (64.11%), Postives = 205/287 (71.43%), Query Frame = 1


Query: 16  EARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNE 75
           EARG WP L PPP P      R  SFY+PTMS +V S  MPSNF IP WNN +IG +++E
Sbjct: 10  EARGNWP-LLPPPYPDP----RNQSFYRPTMSGVVSSWRMPSNFGIPPWNNWNIG-YEHE 69

Query: 76  LEWRYALASNDHTRGWLPSWRGIEFHENRLPECPIVNSRTGMSTEMKVCRQFQRRGKCAY 135
               Y    ND TR  LPS  GIEF E +L E   V++    S EMKVCR FQRR KCAY
Sbjct: 70  FGRSYTPGFND-TRRMLPSGPGIEFREGQLSERWNVDN----SNEMKVCRLFQRRKKCAY 129

Query: 136 GDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSE 195
           GDQCRFLH+IP+ T+D GSSSQN+EV  VA GHVMD  S FDQ EEVRSKVQTK+V R E
Sbjct: 130 GDQCRFLHEIPDKTRDSGSSSQNYEVSTVAFGHVMDRGSGFDQLEEVRSKVQTKVVVRGE 189

Query: 196 IPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGAS--ATTK 255
           IP P+  K+R CY WQTTG C YG  CRFAHGEAELQKLE C+ S+RG VGG S  ATT 
Sbjct: 190 IPKPLIAKSRPCYPWQTTGRCPYGAGCRFAHGEAELQKLEPCNASQRGSVGGVSGTATTT 249

Query: 256 AAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN 301
           AA  AGLR SR IGTDCKNKG  R+ Q F+SKE KKLIGIYADWLE+
Sbjct: 250 AAVEAGLRSSREIGTDCKNKG-PRINQFFESKESKKLIGIYADWLED 284

[Close]

BLAST of CmoCh08G006370 vs. TrEMBL
Match: A5BYY2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031450 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 2.0e-16
Identity = 80/272 (29.41%), Postives = 126/272 (46.32%), Query Frame = 1


Query: 39  PSFYQPTMSEIVPSRVMPSN---------FEIPQWNNVHIGLHDNELEWRYALASNDHTR 98
           P F +P +SE V +  MP +         F+        +G   N  E  +A  + D  R
Sbjct: 43  PLFKKPKISETVTNLRMPGSNNKVMTDTFFKTQLCVKFRLGTCINGDECNFAHGTGDIRR 102

Query: 99  GWLPSWRGIEFHENRLPECPIVNSRTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENT 158
             LP  + +   E  +    I N    ++++MK+CR F R  KC YG++C FLH+  E  
Sbjct: 103 P-LPHGQELSCKEGYV--AGIWNRDHRLNSKMKLCRIFSRGEKCPYGERCNFLHEGFEKC 162

Query: 159 KD-FGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPVNCKTRLCY 218
           ++  G   ++  +    +G     ++   Q E  R    + + A      P   +TRLC+
Sbjct: 163 REGSGKFRESSSISIGCTGSARGYRNGSGQLEFKRFG-DSSLNANQVNANPGFWRTRLCH 222

Query: 219 LWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGASATTKAAAAAGLRCSRGIGT 278
            W+ +G+C+Y E C FAHG+AEL+K       E G+   A  T  +A A  L    G G 
Sbjct: 223 KWEMSGNCAYREKCVFAHGQAELRK--HAVQPEGGKEHAAPKTLPSAKAGALTHKTGPGA 282

Query: 279 DCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN 301
              N+     K  FK ++  K+ GIYADW+++
Sbjct: 283 -TYNQPLQEKKCAFKWEKLGKINGIYADWIDD 307

[Close]

BLAST of CmoCh08G006370 vs. TrEMBL
Match: D7U0X5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g06130 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.4e-16
Identity = 80/272 (29.41%), Postives = 126/272 (46.32%), Query Frame = 1


Query: 39  PSFYQPTMSEIVPSRVMPSN---------FEIPQWNNVHIGLHDNELEWRYALASNDHTR 98
           P F +P +SE V +  MP +         F+        +G   N  E  +A  + D  R
Sbjct: 43  PLFKKPKISETVTNLRMPGSNNKVMTDTFFKTQLCMKFRLGTCINGDECNFAHGTGDIRR 102

Query: 99  GWLPSWRGIEFHENRLPECPIVNSRTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENT 158
             LP  + +   E  +    I N    ++++MK+CR F R  KC YG++C FLH+  E  
Sbjct: 103 P-LPHGQELSCKEGYV--AGIWNRDHRLNSKMKLCRIFSRGEKCPYGERCNFLHEGFEKC 162

Query: 159 KD-FGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPVNCKTRLCY 218
           ++  G   ++  +    +G     ++   Q E  R    + + A      P   +TRLC+
Sbjct: 163 REGSGRFRESSSISIGCTGSARGYRNGSGQLEFKRFG-DSSLNANQVNANPGFWRTRLCH 222

Query: 219 LWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGASATTKAAAAAGLRCSRGIGT 278
            W+ +G+C+Y E C FAHG+AEL+K       E G+   A  T  +A A  L    G G 
Sbjct: 223 KWEMSGNCAYREKCVFAHGQAELRK--HAVQPEGGKEHAAPKTLPSAKADALTHKTGPGA 282

Query: 279 DCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN 301
              N+     K  FK ++  K+ GIYADW+++
Sbjct: 283 -TYNQPLQEKKCAFKWEKLGKINGIYADWIDD 307

[Close]

BLAST of CmoCh08G006370 vs. TrEMBL
Match: B9H161_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s17670g PE=4 SV=2)

HSP 1 Score: 92.8 bits (229), Expect = 7.5e-16
Identity = 64/189 (33.86%), Postives = 92/189 (48.68%), Query Frame = 1


Query: 120 EMKVCRQFQRRGKCAYGDQCRFLHKIPENTK-DFGSSSQNHEVRAVASGHVMDGKSMFDQ 179
           +MK+C++F    +C YGD+C FLH+ P N + D G   ++  +    + H+M   S    
Sbjct: 86  KMKLCKKFYNGEECPYGDRCNFLHEDPANFREDTGRFRESSAISIGTTDHLMGQGSGIFN 145

Query: 180 FEEVRSKVQTKI--VARSEIPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLES 239
             EV       +    RS +  PV  KT+LC  W+ TG C +GE C FAHG AELQ    
Sbjct: 146 AAEVNRPANNAVSDAPRSNLIKPVYWKTKLCTKWEMTGQCPFGEKCHFAHGLAELQVPGG 205

Query: 240 CSTSERGRVGGASATTKAAAAA-----GLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLI 299
            +  + G  G  S  TKA             +  + +  + KG+   K L K K  KK+ 
Sbjct: 206 RTEVDAGNAG--SNVTKAPTPVLPNNMSPSMTVNVPSLVEEKGT---KCLLKWKGQKKIN 265

Query: 300 GIYADWLEN 301
            IYADWL++
Sbjct: 266 RIYADWLDD 269

[Close]

BLAST of CmoCh08G006370 vs. TrEMBL
Match: B9HR99_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0009s13310g PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 9.8e-16
Identity = 63/187 (33.69%), Postives = 88/187 (47.06%), Query Frame = 1


Query: 120 EMKVCRQFQRRGKCAYGDQCRFLHKIPENTK-DFGSSSQNHEVRAVASGHVMDGKSMFDQ 179
           +MK+C++F    +C YGD+C FLH+ P   + D G   ++  +    +G  +   S    
Sbjct: 144 KMKLCKKFYNGEECPYGDRCNFLHEDPSKFREDTGRFRESSAISIGTTGQALGHGSGVFN 203

Query: 180 FEEVRSKVQTKI--VARSEIPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLES 239
             EV       +   +RS I  PV  KT+LC  W+ TG C +GE C FAHG AELQ    
Sbjct: 204 AAEVNRPANNAVSDASRSNIIKPVYWKTKLCTKWEITGQCPFGEKCHFAHGLAELQAPGG 263

Query: 240 CSTSERGRVGGASATTKAAAAA---GLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGI 299
            +  E G  G  S  TKA        +  S  +      +     K L K K  KK+  I
Sbjct: 264 RTEVEAGNAG--SVLTKAPPPLLPNNVSPSMTVNVPSLIEEEQGKKCLLKWKGQKKINRI 323

Query: 300 YADWLEN 301
           YADWL++
Sbjct: 324 YADWLDD 328

[Close]

BLAST of CmoCh08G006370 vs. TAIR10
Match: AT3G19360.1 (AT3G19360.1 Zinc finger (CCCH-type) family protein)

HSP 1 Score: 73.2 bits (178), Expect = 3.1e-13
Identity = 61/219 (27.85%), Postives = 96/219 (43.84%), Query Frame = 1


Query: 109 PIVNSR----TGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAV 168
           P+VN+       +   MK+CR+F    +C YGD+C F+H+     ++     +   V +V
Sbjct: 170 PVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSVISV 229

Query: 169 ASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMP-----------VNCKTRLCYLWQTT 228
                  G +  DQ  +  S +  ++  +  IP+P           V  KTRLC  +  T
Sbjct: 230 -------GATAADQPSDTASNL-IEVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDIT 289

Query: 229 GHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGAS----------ATTKAAAAAGLRCS 288
           G C +G+ C FAHG+AEL        +  GRV G +          A   A  A  ++  
Sbjct: 290 GQCPFGDKCHFAHGQAELH-------NSVGRVEGEAMNAVASVNKQAVVPANEAFAMKPI 349

Query: 289 RGIGTDCK--NKGSSRMKQLFKSKEHKKLIGIYADWLEN 301
             +  D    N+   R K L K  + KK+  IY DW+++
Sbjct: 350 TQVTADSSGLNEEGRRKKCLLKWSDSKKINRIYGDWIDD 373

[Close]

BLAST of CmoCh08G006370 vs. TAIR10
Match: AT1G32360.1 (AT1G32360.1 Zinc finger (CCCH-type) family protein)

HSP 1 Score: 67.0 bits (162), Expect = 2.2e-11
Identity = 44/179 (24.58%), Postives = 74/179 (41.34%), Query Frame = 1


Query: 78  WRYALASNDHTRGW---LPSWRGIEF--HENRLPECPIVNSRTGMSTEMKVCRQFQRRGK 137
           W+  +A+++  R      P+   +E    E ++P      + +G S + + C++F     
Sbjct: 127 WQEIVAAHEEERSGGMGTPTVSVVEIPREEFQIPSLVSSTAESGRSFKGRHCKKFYTEEG 186

Query: 138 CAYGDQCRFLHKIPENTKD-----FGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQ 197
           C YG+ C FLH      ++      G           + G  + G         +     
Sbjct: 187 CPYGESCTFLHDEASRNRESVAISLGPGGYGSGGGGGSGGGSVGGGGSSSNVVVLGGGGG 246

Query: 198 TKIVARSEIPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVG 247
           +   +  +I  P N KTR+C  W+ TG+C +G  C FAHG AEL +       E G+ G
Sbjct: 247 SGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHRFGGGLVEEEGKDG 305

[Close]

BLAST of CmoCh08G006370 vs. TAIR10
Match: AT2G35430.1 (AT2G35430.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 57.0 bits (136), Expect = 2.3e-08
Identity = 61/248 (24.60%), Postives = 98/248 (39.52%), Query Frame = 1


Query: 85  NDHTRGWLPSWRGIEFHENRLPECPIVNSRTGMSTEM-------KVCRQFQRRGKCAYG- 144
           +D++R W  +  G E         P   +R+  S+E+       K+C +F R G C Y  
Sbjct: 39  DDYSRVWAINSDGAE--------SPSKKTRSSSSSEIGKSFFKTKLCFKF-RAGTCPYSA 98

Query: 145 DQCRFLHKI---------PENTKD-FGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKV 204
             C F H           P N ++    +S+N E  AV+ G               R  V
Sbjct: 99  SSCHFAHSAEELRLPPPPPPNWQETVTEASRNRESFAVSLGP--------------RGNV 158

Query: 205 QTKIVARSEIPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKL------------ 264
              + +        N KTR+C  WQTTG+C +G  C FAHG +EL               
Sbjct: 159 AQTLKSP-------NWKTRICNKWQTTGYCPFGSHCHFAHGPSELHTFGGGLVEGECKIG 218

Query: 265 --ESCSTSERGRVGGASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIG 301
              +  T +RG+V     T  +  + G+   R      +     R ++ +K  +  K+  
Sbjct: 219 TSATLDTKQRGQVD----TVTSLVSPGVSSQRTSSAVTQKPNGVRTQRKWKGPD--KISR 250

[Close]

BLAST of CmoCh08G006370 vs. NCBI nr
Match: gi|449436118|ref|XP_004135841.1| (PREDICTED: zinc finger CCCH domain-containing protein 39-like isoform X1 [Cucumis sativus])

HSP 1 Score: 326.6 bits (836), Expect = 4.4e-86
Identity = 184/287 (64.11%), Postives = 205/287 (71.43%), Query Frame = 1


Query: 16  EARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNE 75
           EARG WP L PPP P      R  SFY+PTMS +V S  MPSNF IP WNN +IG +++E
Sbjct: 10  EARGNWP-LLPPPYPDP----RNQSFYRPTMSGVVSSWRMPSNFGIPPWNNWNIG-YEHE 69

Query: 76  LEWRYALASNDHTRGWLPSWRGIEFHENRLPECPIVNSRTGMSTEMKVCRQFQRRGKCAY 135
               Y    ND TR  LPS  GIEF E +L E   V++    S EMKVCR FQRR KCAY
Sbjct: 70  FGRSYTPGFND-TRRMLPSGPGIEFREGQLSERWNVDN----SNEMKVCRLFQRRKKCAY 129

Query: 136 GDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSE 195
           GDQCRFLH+IP+ T+D GSSSQN+EV  VA GHVMD  S FDQ EEVRSKVQTK+V R E
Sbjct: 130 GDQCRFLHEIPDKTRDSGSSSQNYEVSTVAFGHVMDRGSGFDQLEEVRSKVQTKVVVRGE 189

Query: 196 IPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGAS--ATTK 255
           IP P+  K+R CY WQTTG C YG  CRFAHGEAELQKLE C+ S+RG VGG S  ATT 
Sbjct: 190 IPKPLIAKSRPCYPWQTTGRCPYGAGCRFAHGEAELQKLEPCNASQRGSVGGVSGTATTT 249

Query: 256 AAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN 301
           AA  AGLR SR IGTDCKNKG  R+ Q F+SKE KKLIGIYADWLE+
Sbjct: 250 AAVEAGLRSSREIGTDCKNKG-PRINQFFESKESKKLIGIYADWLED 284

[Close]

BLAST of CmoCh08G006370 vs. NCBI nr
Match: gi|659122336|ref|XP_008461087.1| (PREDICTED: zinc finger CCCH domain-containing protein 39-like [Cucumis melo])

HSP 1 Score: 304.3 bits (778), Expect = 2.4e-79
Identity = 178/287 (62.02%), Postives = 197/287 (68.64%), Query Frame = 1


Query: 16  EARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNE 75
           EARG WP L PPP P      R  SFY+ TMS  V S  MPSNF IP WNN +IG +++E
Sbjct: 10  EARGNWP-LLPPPYPDP----RNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIG-YEHE 69

Query: 76  LEWRYALASNDHTRGWLPSWRGIEFHENRLPECPIVNSRTGMSTEMKVCRQFQRRGKCAY 135
           L   Y    ND T   LPS  GIEFHE +L E   V+     S EMKVCR FQRR KCAY
Sbjct: 70  LGRSYRPGFND-THRMLPSRPGIEFHEGQLSERWNVDD----SNEMKVCRLFQRRKKCAY 129

Query: 136 GDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSE 195
           GDQCRFLH+IPE T+D GSSSQN+EVR          +S FDQ EEVRSKVQTK+V R E
Sbjct: 130 GDQCRFLHEIPEKTRDSGSSSQNYEVR----------RSGFDQLEEVRSKVQTKVVVRGE 189

Query: 196 IPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGG--ASATTK 255
           IP P+  K R CY WQTTG C YG  CRFAHGEAELQKLE CS S+RG VGG  A+ATT 
Sbjct: 190 IPKPLIGKPRPCYPWQTTGRCPYGAGCRFAHGEAELQKLEPCSASQRGSVGGVSATATTT 249

Query: 256 AAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN 301
           A   AGLR S+ IGTDCKNKG  R+ Q F+SKE KKLIGIYADWLE+
Sbjct: 250 APVEAGLRSSKEIGTDCKNKG-PRINQFFESKESKKLIGIYADWLED 274

[Close]

BLAST of CmoCh08G006370 vs. NCBI nr
Match: gi|778729122|ref|XP_011659534.1| (PREDICTED: uncharacterized protein LOC101205166 isoform X2 [Cucumis sativus])

HSP 1 Score: 241.9 bits (616), Expect = 1.4e-60
Identity = 134/221 (60.63%), Postives = 152/221 (68.78%), Query Frame = 1


Query: 16  EARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNE 75
           EARG WP L PPP P      R  SFY+PTMS +V S  MPSNF IP WNN +IG +++E
Sbjct: 10  EARGNWP-LLPPPYPDP----RNQSFYRPTMSGVVSSWRMPSNFGIPPWNNWNIG-YEHE 69

Query: 76  LEWRYALASNDHTRGWLPSWRGIEFHENRLPECPIVNSRTGMSTEMKVCRQFQRRGKCAY 135
               Y    ND TR  LPS  GIEF E +L E   V++    S EMKVCR FQRR KCAY
Sbjct: 70  FGRSYTPGFND-TRRMLPSGPGIEFREGQLSERWNVDN----SNEMKVCRLFQRRKKCAY 129

Query: 136 GDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSE 195
           GDQCRFLH+IP+ T+D GSSSQN+EV  VA GHVMD  S FDQ EEVRSKVQTK+V R E
Sbjct: 130 GDQCRFLHEIPDKTRDSGSSSQNYEVSTVAFGHVMDRGSGFDQLEEVRSKVQTKVVVRGE 189

Query: 196 IPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLES 237
           IP P+  K+R CY WQTTG C YG  CRFAHGEAE +  E+
Sbjct: 190 IPKPLIAKSRPCYPWQTTGRCPYGAGCRFAHGEAENRTTEA 219

[Close]

BLAST of CmoCh08G006370 vs. NCBI nr
Match: gi|719981103|ref|XP_010250023.1| (PREDICTED: zinc finger CCCH domain-containing protein 39-like [Nelumbo nucifera])

HSP 1 Score: 105.5 bits (262), Expect = 1.6e-19
Identity = 62/184 (33.70%), Postives = 97/184 (52.72%), Query Frame = 1


Query: 119 TEMKVCRQFQRRGKCAYGDQCRFLHKIPENTK-DFGSSSQNHEVRAVASGHVMDGKSMFD 178
           T++K+C++F    +C YGD+C FLH+ P   + D G   ++  +     G   D  + FD
Sbjct: 148 TKLKLCKKFYNGEECPYGDRCNFLHEDPSKFREDSGRFRESSAISIGTIGSPGDNGAGFD 207

Query: 179 QFEEVRSKVQTKIVARSEIPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESC 238
           Q +E  S   + +        PV  KTR+C  W+TTG C +G+ C FAHG+AELQK    
Sbjct: 208 Q-QEGHSSSNSSLDVNRVNAKPVFWKTRICNKWETTGQCPFGDKCHFAHGQAELQKFGGQ 267

Query: 239 STSERGRVGGASATTKAAAAAGLRCSR-GIGTDCKNKGSSRMKQLFKSKEHKKLIGIYAD 298
           + +E G  GG+ +         +  ++ G+GT  K +     K L K K  +K+  IYAD
Sbjct: 268 NEAESGNAGGSLSKPLPNPIQDVSPTKTGMGTTSKQQQVQSKKCLLKWKGPEKINRIYAD 327

Query: 299 WLEN 301
           W+++
Sbjct: 328 WIDD 330

[Close]

BLAST of CmoCh08G006370 vs. NCBI nr
Match: gi|743939993|ref|XP_011014453.1| (PREDICTED: zinc finger CCCH domain-containing protein 39-like isoform X3 [Populus euphratica])

HSP 1 Score: 97.4 bits (241), Expect = 4.4e-17
Identity = 65/187 (34.76%), Postives = 92/187 (49.20%), Query Frame = 1


Query: 120 EMKVCRQFQRRGKCAYGDQCRFLHKIPENTK-DFGSSSQNHEVRAVASGHVMDGKSMFDQ 179
           +MK+C++F    +C YGD+C FLH+ P N + D G   ++  +    +GH+M   S    
Sbjct: 116 KMKLCKKFYNGEECPYGDRCNFLHEDPANFREDAGRFRESSAISIGTTGHLMGQGSGVFN 175

Query: 180 FEEVRSKVQTKI--VARSEIPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLES 239
             EV     T +    RS +  PV  KT+LC  W+ TG C +GE C FAHG AELQ    
Sbjct: 176 AAEVNRPANTAVSDAPRSNLIKPVYWKTKLCTKWEMTGQCPFGEKCHFAHGLAELQVPGG 235

Query: 240 CSTSERGRVGGA---SATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGI 299
            +  E G  G     S T           +  + +  + KG+   K L K K  KK+  I
Sbjct: 236 RNEVEAGNAGSTVTNSPTPVLPNNTSPSMTVNVPSLVEEKGT---KCLLKWKGQKKINRI 295

Query: 300 YADWLEN 301
           YADWL++
Sbjct: 296 YADWLDD 299

The following BLAST results are available for this feature:

BLAST of CmoCh08G006370 vs. Swiss-Prot


Match Name	E-value	Identity	Description
C3H39_ARATH	5.6e-12	27.85	Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana GN=At3g193...	[more]
C3H12_ARATH	4.0e-10	24.58	Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana GN=At1g323...	[more]
C3H56_ORYSJ	6.8e-10	25.71	Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica GN...	[more]
C3H28_ARATH	4.1e-07	24.60	Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana GN=At2g354...	[more]
C3H14_ORYSJ	5.9e-06	28.10	Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica GN...	[more]

BLAST of CmoCh08G006370 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBW4_CUCSA	3.1e-86	64.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G433210 PE=4 SV=1	[more]
A5BYY2_VITVI	2.0e-16	29.41	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031450 PE=4 SV=1	[more]
D7U0X5_VITVI	3.4e-16	29.41	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g06130 PE=4 SV=...	[more]
B9H161_POPTR	7.5e-16	33.86	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s17670g PE=4 SV=2	[more]
B9HR99_POPTR	9.8e-16	33.69	Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0009s13310g PE=4 SV=1	[more]

BLAST of CmoCh08G006370 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G19360.1	3.1e-13	27.85	Zinc finger (CCCH-type) family protein	[more]
AT1G32360.1	2.2e-11	24.58	Zinc finger (CCCH-type) family protein	[more]
AT2G35430.1	2.3e-08	24.60	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

BLAST of CmoCh08G006370 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449436118\|ref\|XP_004135841.1\|	4.4e-86	64.11	PREDICTED: zinc finger CCCH domain-containing protein 39-like isoform X1 [Cucumi...	[more]
gi\|659122336\|ref\|XP_008461087.1\|	2.4e-79	62.02	PREDICTED: zinc finger CCCH domain-containing protein 39-like [Cucumis melo]	[more]
gi\|778729122\|ref\|XP_011659534.1\|	1.4e-60	60.63	PREDICTED: uncharacterized protein LOC101205166 isoform X2 [Cucumis sativus]	[more]
gi\|719981103\|ref\|XP_010250023.1\|	1.6e-19	33.70	PREDICTED: zinc finger CCCH domain-containing protein 39-like [Nelumbo nucifera]	[more]
gi\|743939993\|ref\|XP_011014453.1\|	4.4e-17	34.76	PREDICTED: zinc finger CCCH domain-containing protein 39-like isoform X3 [Populu...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000571	Znf_CCCH

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G006370.1	CmoCh08G006370.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	GENE3D	G3DSA:4.10.1000.10		coord: 122..147 score: 2.0E-8coord: 197..233 score: 7.2
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 122..143 score: 1.0E-7coord: 203..228 score: 1.
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 118..145 score: 6.7E-6coord: 201..228 score: 3.
IPR000571	Zinc finger, CCCH-type	PROFILE	PS50103	ZF_C3H1	coord: 201..229 score: 14.427coord: 118..146 score: 15
IPR000571	Zinc finger, CCCH-type	unknown	SSF90229	CCCH zinc finger	coord: 199..232 score: 3.27E-9coord: 119..147 score: 1.4
None	No IPR available	PANTHER	PTHR12547	CCCH ZINC FINGER/TIS11-RELATED	coord: 121..300 score: 6.0
None	No IPR available	PANTHER	PTHR12547:SF70	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 39	coord: 121..300 score: 6.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh08G006370	Cucsa.105270	Cucumber (Gy14) v1	cgycmoB0239
CmoCh08G006370	CmaCh17G008450	Cucurbita maxima (Rimu)	cmacmoB367
CmoCh08G006370	CmaCh08G006720	Cucurbita maxima (Rimu)	cmacmoB912
CmoCh08G006370	Cla015383	Watermelon (97103) v1	cmowmB839
CmoCh08G006370	Csa7G433210	Cucumber (Chinese Long) v2	cmocuB906
CmoCh08G006370	MELO3C023403	Melon (DHL92) v3.5.1	cmomeB816
CmoCh08G006370	ClCG09G002730	Watermelon (Charleston Gray)	cmowcgB781
CmoCh08G006370	CSPI07G20790	Wild cucumber (PI 183967)	cmocpiB919
CmoCh08G006370	Lsi02G027280	Bottle gourd (USVL1VR-Ls)	cmolsiB814
CmoCh08G006370	Cp4.1LG12g07830	Cucurbita pepo (Zucchini)	cmocpeB835
CmoCh08G006370	Cp4.1LG17g05820	Cucurbita pepo (Zucchini)	cmocpeB853
CmoCh08G006370	MELO3C023403.2	Melon (DHL92) v3.6.1	cmomedB921
CmoCh08G006370	CsaV3_7G032610	Cucumber (Chinese Long) v3	cmocucB1072
CmoCh08G006370	Cla97C09G164870	Watermelon (97103) v2	cmowmbB912
CmoCh08G006370	Bhi09G000039	Wax gourd	cmowgoB1130
CmoCh08G006370	CsGy7G019030	Cucumber (Gy14) v2	cgybcmoB961
CmoCh08G006370	Carg09572	Silver-seed gourd	carcmoB1378
CmoCh08G006370	Carg18826	Silver-seed gourd	carcmoB1018

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh08G006370	CmoCh17G008170	Cucurbita moschata (Rifu)	cmocmoB312

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh08G006370	Cucurbita moschata (Rifu)	cmocmoB234
CmoCh08G006370	Cucurbita moschata (Rifu)	cmocmoB379
CmoCh08G006370	Cucurbita maxima (Rimu)	cmacmoB280
CmoCh08G006370	Cucurbita maxima (Rimu)	cmacmoB491
CmoCh08G006370	Wild cucumber (PI 183967)	cmocpiB914
CmoCh08G006370	Cucumber (Chinese Long) v2	cmocuB901
CmoCh08G006370	Melon (DHL92) v3.5.1	cmomeB811
CmoCh08G006370	Melon (DHL92) v3.5.1	cmomeB823
CmoCh08G006370	Watermelon (Charleston Gray)	cmowcgB805
CmoCh08G006370	Watermelon (97103) v1	cmowmB855
CmoCh08G006370	Cucurbita pepo (Zucchini)	cmocpeB839
CmoCh08G006370	Cucurbita pepo (Zucchini)	cmocpeB854
CmoCh08G006370	Bottle gourd (USVL1VR-Ls)	cmolsiB810
CmoCh08G006370	Bottle gourd (USVL1VR-Ls)	cmolsiB829
CmoCh08G006370	Cucumber (Gy14) v2	cgybcmoB956
CmoCh08G006370	Melon (DHL92) v3.6.1	cmomedB914
CmoCh08G006370	Silver-seed gourd	carcmoB0169
CmoCh08G006370	Silver-seed gourd	carcmoB0289
CmoCh08G006370	Silver-seed gourd	carcmoB1379
CmoCh08G006370	Cucumber (Chinese Long) v3	cmocucB1067
CmoCh08G006370	Watermelon (97103) v2	cmowmbB902