Cucsa.105260 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTTTACCAAAACAAAAAAAAaCGTTTCGAATTTTTGTGGGGTTTTTTtCCCTTGTTTTTGTAAATGAATTGAAACGGGTTTCGTCAGATTTCTCTTCCAAAGCCCATTTTGTTCGTAAAATTTTACTCTTTTTATCTTGGATTTTCGCACACCACCAAAATTCTTGTCCTTTTTCTAGCTCTGTCTCAGGAGGATTCAACAGGGTTTtCTTTTTTAATCTTATACTTTTGCTGTGTTGTCCATACTCTGAACTCCTCTGCCCATCCCATTCTGCTCGAAGCTTCTTTCTTCTACGATGGCCTTCTGTTAGTGTTTCTCTCTTCCATTATTAGTGTTTCTCTATGTTGGGTCCTTTTGTTTTGTTTATTTACTTACCAGTCTTGTGCATGGGTAGTATCGACTGATGTATTCAGCTGAGATTATGAATGTATCTGGGTTGAGTTTTGCTTTAATTCTTGAATGGGTTCAAAATCAAAGCTACGTTGAAGTTGTATTCTTGCTGGAAACATGATTTATTTTTAATGAATGTGTATCACTTCAAACTCTTTTTCTGCAATTCCCACTTAATCTGAGGGTTGAATTTCAACGATATGAAAGGGGATGAGAATGCATGAATCCTCTCGATATAGCATTTTAAGTTTTAATATTGTTGTGGAACCTGTTTGAGATTCTTTCTTCATTTAGTTTTAGGCTAAATTATAAAAGCTTCCCTTATATTTTGATACTTGTTTTGAAAATATCCGTATTCTTTTAAAGATTGTTATATTGTTCTTGACCTTTCATAAAGATGTCAAAACTAACTTTGGAGTATAAATCCTTTCAGATTTCGTAGTTGGAACTTGTAATGGTGTGATGGTGACCTAGAAATGAGTCACGATCAAAATCTTTGTTCTAGGTCACCACCAAATATATCTAGGTCCCAATCTTCGTTTTAAATTCCAAAGAAACTGTAAGGTAGTTATGAAAGGGCAAGGGTAACATTGCAACTTTTGAAAGAAATGGAGTATTTTGTAAACAAACGCAAAATTCAGTATATTTATTATTCAACTTCACTTTTATTGTGATCATAGGCATTGTTTCACTGTTGTTGTCTACTCATATTGCAGGCAGCTTGAGAGCTGCAGATATTAAGTTCTCAAAGTTGGATATTAGAAGGGGAAGAGTCTCTACTTTACAACCTTGTAGCTTAAGAAATTGGATAGGAAGGACACCACATCAATATTCGAGTTTGGTAATATCACATTCGTCTCAGAAAGCTTTGCATGCATGTTCTGGTGCATCGCCCAAGGCCCAGAGTATGTGCCTTTTGTTACTCGTAATCTTTTCATCTTCATGAAACCCAACATTATGTAATTGTAGTCAAAAGTTAATGTCTGCATTTTTCTTCATGAAGATTTTTTAGTTTTTtGTTTGACCTTGGATTTTTTTTtGAAAGAAAAGTATAATAGGAATTTTGTATGAACAAACTGAAAGCTGATATGATTAGATAGAACTGGGCACAGCTTGTGAAAAGCCAACAAGACTTCTTTAATCAATTTTGAAGAGCCAATTACTGTTGAACTCTTTAGGTTAGGTTATTCATATACACCTTCAAGGTGTACACACATTTTTGGATTCTCGAGTCTCCTGGAGTTTGTCAACCTGGTTAACTTTCATTTAAATTGCACTGATGGTAGTTACATAAAGTACTTAACAGTTAACACAAACCACATTTTCAAAACTATGTGCATCACTATAACTATACTTTTTTTCCTATAAGGTCCTGTTGGAATGTTAAACTTAAACTCTCGCTGATTTGCATCTGTCTTATTGATGAGGTACAGCCGTAATCAAATCAGAAACAGGTTCTGAAGAAATAAAACCTTCCAGTTTGGGCAGCCAACTTATCCCAAATTTTCATGAGGTGAGATTGGGTTTTATTGGTTAAAAGTTTATTCAATGTAAGTACATTCTAACTGTTGGCTTGCTCTCTATTGGTTGGGTAGAGGAAATATAAAGGTGATGGTGGGGCTGGAAAGTAGATAGTTGAACATTTTAAAACTTGATTAGTATGGTGGACATTTTTTtATTTAGTATACGGAAAATCTTCGACTATTAGATGATCCAGACATATTAGTAAACTTTACATGTTAATCAAGTGTTGGATTCTCATATATTGCAGTTTGAAATGGGCAACCTGAACTCTTTCAACAAGCTCTTACTTTCTTCCACCAAACCTATATGCCTTTTGGATTTTCATGATGGTCTTCTCCTACAGAAATAGCGAATTTATTCAACTTAACCATGTCCTTTTGGGAATCCGAAACATACTTTTCAGTTGCTATATTGTATGCAGGTGGAAACCCTACTTACGAACGTATGTGATACATCTTCGATTGCAGAGTTTGAATTGAAAGTAAGTAGTATTGAACTATTTTTAACTATTTGAACCTTCATTGTTCTTTCTCCTATTGTTCTACAGAGAGAAGACTTTTGCTCTAACTTCTTTGTCTCAAATATTTTCCTCGTGCTATTAGCTCAGCGGATTCAACTTGCGGATGGTGAGGAGCTTAAAAAGCAAAAATTTACCTCTTCCCCCTGTTCCAGCTCCAGCTCCTGATATTCAAAATACAAGCTCTATACCATCAGATTCAAATGGATTGGTTAAAACAACATCGTTGGCTTTAGTCAAACCAGAACCTGTTTCTTCTTCTCCACGGGGGATCTCCAGATATGTAGAGAAAGCTAGAGATGGAGGCGTAACAATACTTTCATCTCCTAATGTAAGCAAACAACGTTTTGTTTATTTTCTCTTGATCACAGTTATGGATGGTAAGATAAGATTTGAATGCAGGTTGGGGTTTTCAGAAGGTCTCGAACCATAAAAGGCAAGCGTGCACCACCATCTTGTGCAGAGGTATGTTAAATCCATCCACCCTCTTAAAAGGAAAAAaGAAAAaGGAAAATACTTGAGACAGTTCATAAATTATAACGTGAAGCCAAAGCTTAACTGCATTCTTGGCTATTTCTGGTCTAATACATTATGTCTTCTCATGTGCTGTGCTTTTACCTTTTGACATGCTTATTTCCCTGATAAAATAAATAATGACCATCTACCAAACTTTACTAACATTGATTCACTAAACAGGACCAGGTAGTAAGGGAAGGTCAAGTTCTTTGTTACATTGAACAGTTAGGTGGCCAGATCCCTGTCAAGGTTCGAGTCTCAACTTTAAACTTCTATAGTCATTGTTCTCTGCTGTTTAGGTTGTGTATATGTTCACATAAAGCTCACTGTTCTTGCACATTTGTTTTTCTGTTCATTTTGCAGTCTGACACACCTGGAGAAATCTTGAAGATACTACGCAAGGACGGTGGTAATTTTTtCAATGTTCTTTTATTTTCCTTTCCTATTGTTTGAAGTTTCATGAATAATAGCTTAGCAATTCACCATTTTCATGACAGAGCCTGTTGGATATGGTGATGCTCTTATTGCTGTTCTGCCTTCATTTCCTGGAATAAAGAAGCTTCGGTAGTAGATCGTTTCCAAATCAAATCAATACTTTCTCAGATGTTTTATGCCTCTAGATTATTGTAATCAATCTCTTCAATTTATCTTTGCATGGAAATTATACTTGCAATTTCATCTCTCTCTCTCTCTCTTAATATTAACTGACA TGTTTACCAAAACAAAAAAAAACGTTTCGAATTTTTGTGGGGTTTTTTTCCCTTGTTTTTGTAAATGAATTGAAACGGGTTTCGTCAGATTTCTCTTCCAAAGCCCATTTTGTTCGTAAAATTTTACTCTTTTTATCTTGGATTTTCGCACACCACCAAAATTCTTGTCCTTTTTCTAGCTCTGTCTCAGGAGGATTCAACAGGGTTTTCTTTTTTAATCTTATACTTTTGCTGTGTTGTCCATACTCTGAACTCCTCTGCCCATCCCATTCTGCTCGAAGCTTCTTTCTTCTACGATGGCCTTCTGCAGCTTGAGAGCTGCAGATATTAAGTTCTCAAAGTTGGATATTAGAAGGGGAAGAGTCTCTACTTTACAACCTTGTAGCTTAAGAAATTGGATAGGAAGGACACCACATCAATATTCGAGTTTGGTAATATCACATTCGTCTCAGAAAGCTTTGCATGCATGTTCTGGTGCATCGCCCAAGGCCCAGACCGTAATCAAATCAGAAACAGGTTCTGAAGAAATAAAACCTTCCAGTTTGGGCAGCCAACTTATCCCAAATTTTCATGAGGTGGAAACCCTACTTACGAACGTATGTGATACATCTTCGATTGCAGAGTTTGAATTGAAACTCAGCGGATTCAACTTGCGGATGGTGAGGAGCTTAAAAAGCAAAAATTTACCTCTTCCCCCTGTTCCAGCTCCAGCTCCTGATATTCAAAATACAAGCTCTATACCATCAGATTCAAATGGATTGGTTAAAACAACATCGTTGGCTTTAGTCAAACCAGAACCTGTTTCTTCTTCTCCACGGGGGATCTCCAGATATGTAGAGAAAGCTAGAGATGGAGGCGTAACAATACTTTCATCTCCTAATGTTGGGGTTTTCAGAAGGTCTCGAACCATAAAAGGCAAGCGTGCACCACCATCTTGTGCAGAGGACCAGGTAGTAAGGGAAGGTCAAGTTCTTTGTTACATTGAACAGTTAGGTGGCCAGATCCCTGTCAAGTCTGACACACCTGGAGAAATCTTGAAGATACTACGCAAGGACGGTGAGCCTGTTGGATATGGTGATGCTCTTATTGCTGTTCTGCCTTCATTTCCTGGAATAAAGAAGCTTCGGTAGTAGATCGTTTCCAAATCAAATCAATACTTTCTCAGATGTTTTATGCCTCTAGATTATTGTAATCAATCTCTTCAATTTATCTTTGCATGGAAATTATACTTGCAATTTCATCTCTCTCTCTCTCTCTTAATATTAACTGACA ATGGCCTTCTGCAGCTTGAGAGCTGCAGATATTAAGTTCTCAAAGTTGGATATTAGAAGGGGAAGAGTCTCTACTTTACAACCTTGTAGCTTAAGAAATTGGATAGGAAGGACACCACATCAATATTCGAGTTTGGTAATATCACATTCGTCTCAGAAAGCTTTGCATGCATGTTCTGGTGCATCGCCCAAGGCCCAGACCGTAATCAAATCAGAAACAGGTTCTGAAGAAATAAAACCTTCCAGTTTGGGCAGCCAACTTATCCCAAATTTTCATGAGGTGGAAACCCTACTTACGAACGTATGTGATACATCTTCGATTGCAGAGTTTGAATTGAAACTCAGCGGATTCAACTTGCGGATGGTGAGGAGCTTAAAAAGCAAAAATTTACCTCTTCCCCCTGTTCCAGCTCCAGCTCCTGATATTCAAAATACAAGCTCTATACCATCAGATTCAAATGGATTGGTTAAAACAACATCGTTGGCTTTAGTCAAACCAGAACCTGTTTCTTCTTCTCCACGGGGGATCTCCAGATATGTAGAGAAAGCTAGAGATGGAGGCGTAACAATACTTTCATCTCCTAATGTTGGGGTTTTCAGAAGGTCTCGAACCATAAAAGGCAAGCGTGCACCACCATCTTGTGCAGAGGACCAGGTAGTAAGGGAAGGTCAAGTTCTTTGTTACATTGAACAGTTAGGTGGCCAGATCCCTGTCAAGTCTGACACACCTGGAGAAATCTTGAAGATACTACGCAAGGACGGTGAGCCTGTTGGATATGGTGATGCTCTTATTGCTGTTCTGCCTTCATTTCCTGGAATAAAGAAGCTTCGGTAG MAFCSLRAADIKFSKLDIRRGRVSTLQPCSLRNWIGRTPHQYSSLVISHSSQKALHACSGASPKAQTVIKSETGSEEIKPSSLGSQLIPNFHEVETLLTNVCDTSSIAEFELKLSGFNLRMVRSLKSKNLPLPPVPAPAPDIQNTSSIPSDSNGLVKTTSLALVKPEPVSSSPRGISRYVEKARDGGVTILSSPNVGVFRRSRTIKGKRAPPSCAEDQVVREGQVLCYIEQLGGQIPVKSDTPGEILKILRKDGEPVGYGDALIAVLPSFPGIKKLR*
BLAST of Cucsa.105260 vs. Swiss-Prot
Match: BCCP_NOSS1 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=accB PE=1 SV=2) HSP 1 Score: 66.6 bits (161), Expect = 4.8e-10 Identity = 54/190 (28.42%), Postives = 88/190 (46.32%), Query Frame = 1
BLAST of Cucsa.105260 vs. Swiss-Prot
Match: BCCP1_ARATH (Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic OS=Arabidopsis thaliana GN=BCCP1 PE=1 SV=2) HSP 1 Score: 59.3 bits (142), Expect = 7.7e-08 Identity = 57/210 (27.14%), Postives = 87/210 (41.43%), Query Frame = 1
BLAST of Cucsa.105260 vs. TrEMBL
Match: A0A0A0KA77_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G433220 PE=4 SV=1) HSP 1 Score: 547.0 bits (1408), Expect = 1.4e-152 Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 1
BLAST of Cucsa.105260 vs. TrEMBL
Match: A0A0S3SFD9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G014900 PE=4 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 3.1e-72 Identity = 156/279 (55.91%), Postives = 196/279 (70.25%), Query Frame = 1
BLAST of Cucsa.105260 vs. TrEMBL
Match: D7U0X4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g06120 PE=4 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 1.5e-71 Identity = 152/278 (54.68%), Postives = 189/278 (67.99%), Query Frame = 1
BLAST of Cucsa.105260 vs. TrEMBL
Match: G7IUS4_MEDTR (Biotin carboxyl carrier acetyl-CoA carboxylase OS=Medicago truncatula GN=MTR_2g103280 PE=4 SV=2) HSP 1 Score: 277.3 bits (708), Expect = 2.0e-71 Identity = 151/275 (54.91%), Postives = 189/275 (68.73%), Query Frame = 1
BLAST of Cucsa.105260 vs. TrEMBL
Match: A0A067EG49_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024168mg PE=4 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 2.0e-71 Identity = 148/278 (53.24%), Postives = 192/278 (69.06%), Query Frame = 1
BLAST of Cucsa.105260 vs. TAIR10
Match: AT3G15690.2 (AT3G15690.2 Single hybrid motif superfamily protein) HSP 1 Score: 240.0 bits (611), Expect = 1.8e-63 Identity = 136/278 (48.92%), Postives = 177/278 (63.67%), Query Frame = 1
BLAST of Cucsa.105260 vs. TAIR10
Match: AT1G52670.1 (AT1G52670.1 Single hybrid motif superfamily protein) HSP 1 Score: 215.7 bits (548), Expect = 3.6e-56 Identity = 131/280 (46.79%), Postives = 168/280 (60.00%), Query Frame = 1
BLAST of Cucsa.105260 vs. TAIR10
Match: AT3G56130.1 (AT3G56130.1 biotin/lipoyl attachment domain-containing protein) HSP 1 Score: 131.7 bits (330), Expect = 6.9e-31 Identity = 79/225 (35.11%), Postives = 117/225 (52.00%), Query Frame = 1
BLAST of Cucsa.105260 vs. TAIR10
Match: AT5G16390.1 (AT5G16390.1 chloroplastic acetylcoenzyme A carboxylase 1) HSP 1 Score: 59.3 bits (142), Expect = 4.3e-09 Identity = 57/210 (27.14%), Postives = 87/210 (41.43%), Query Frame = 1
BLAST of Cucsa.105260 vs. NCBI nr
Match: gi|449436116|ref|XP_004135840.1| (PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic [Cucumis sativus]) HSP 1 Score: 547.0 bits (1408), Expect = 1.9e-152 Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 1
BLAST of Cucsa.105260 vs. NCBI nr
Match: gi|659122330|ref|XP_008461084.1| (PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic isoform X1 [Cucumis melo]) HSP 1 Score: 481.1 bits (1237), Expect = 1.3e-132 Identity = 243/276 (88.04%), Postives = 258/276 (93.48%), Query Frame = 1
BLAST of Cucsa.105260 vs. NCBI nr
Match: gi|659122332|ref|XP_008461085.1| (PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic isoform X2 [Cucumis melo]) HSP 1 Score: 317.8 bits (813), Expect = 1.9e-83 Identity = 160/183 (87.43%), Postives = 172/183 (93.99%), Query Frame = 1
BLAST of Cucsa.105260 vs. NCBI nr
Match: gi|645244954|ref|XP_008228653.1| (PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic [Prunus mume]) HSP 1 Score: 283.9 bits (725), Expect = 3.1e-73 Identity = 147/277 (53.07%), Postives = 189/277 (68.23%), Query Frame = 1
BLAST of Cucsa.105260 vs. NCBI nr
Match: gi|950964699|ref|XP_014498647.1| (PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase [Vigna radiata var. radiata]) HSP 1 Score: 283.9 bits (725), Expect = 3.1e-73 Identity = 153/281 (54.45%), Postives = 193/281 (68.68%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |