CmaCh17G008440 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGGGGCCCACAAGGTAGAAACCTCGATTTAAAATTGATGTTAGGGCCCACAAGGTAGAAACCTCTTCACATTCTAAAATTATGAGACTGATGATGATATGTAACCGGACAAAGTGACAAGATCCTACTTAGTGGTATTAGAGTCAATCCGGACAATATCTACTAGTGGTAGACATAGGCGGCAACAAATATCTCACTTAAACGATTTTGAAAGGCTTAGATTCACATCTTTACAACCAATATTTAGTTGATGTTGTTAGTGATCATGACATCACTTAAGTAGCGGTGTGGCAAATTATCCCATGGATTTATTCCTCATTTAAAGCACAATTATAAAAGCAAACGATCCCCCAAAATTCAGCTTTGAACGAACGATCAAGGGTTGGAGAAGAACAAAAGCTCGACACGTCTGGTTAGGCCCAACTGTTCACCTAAACAAAACGTTTAGAATTTCGGGTTTCTTTTTTCATTTTAATAAATGAACTCAAACGGATTTTCGTCGAATTTCTCTTCCAAACCCCGTTTTGTTCACAGGATCTTTTCTTATCTTGGGATCTTGAACACCACCAAAATTCTCGCCCCTTTTTCTAGCCGTCTCAGGAGGAATCAACACACTTTTTTTCTTTAAATTTTTTTTATTCTTGCAGTGTTGGCCCATACTCTGAACTCCTCTGCCCATCGTTCTTGGAGCTTCTTTACTCTGTAATGGCGTCCTGTAAGTGTTTCTGTCTGCCATTCATGGTCCTTTTTAGTTTTGTTTATTTACTAGTCTCGCGCATGGGTTATCTGTGTTGAGTTTTGTTTTCATTTTTTTCTTGGTAATGATGAAGATATAATTCTTGAATTCTTTCAAAATCATGGCTATGATGATAGATTTTAATGAATGTATATGATTTCGAAGTTCTTTTCTGCATTCCCCACTTAACCCGAGGGTTTGAATTTCAATGATATGAACGGGTGATGAGAATGAGAATGATCGAATCTTCTTGATATACAAATTTAAGTATAAAGATTGGGATGAGATTCTTACTTCGTTTTCTTTTATTATGATCATAATCATAGTTTCTCTGCTGCTGTTGTTGCTGTCCTCCTCATATTGCAGGCAGCTTGAGAACTGCAGACTTTAAAGTCTTCAGGTTGGATGTTTGTAGGGAAAGAGTCTCTACTTTACCATCTTGTAGCTTAAGAAATTGGAGCAGGACACCGCAGCGATATTCGAGTTTGATAATATCATGTTCGTCTCGAAGAGATTTGCGCGCTTGTTGTAATGCATCGCCTGAGACCCGGAGTATGTGTTTATGTTACTTGTAATCTTTTCATGAAGGTCAACATCATGTAATTGTTGTCAAAAGTCAGTTTCTGAACTGCATGTAGATTTTCATAGCTTTCTTGTTCTTTGTCTTACATCGGGTTTTCTTTTGAATTGAAAGTACATTAGGAATTTTACATGAACAAATTGGTAAGCTGGTGTGATTGGATTAGGATTGGGCAGAGCTTTTGAAAAGTGAACTAGGTTTCTTGAGTCTACTTTTTAAAGACAATTACCATTGAATGTTAAAGGTTTGGTTACTCATATACACCTTTTAAGGCATATACATTTTTGCATTTTCAAAACTCCTGGAGGTTGTCAATCTCTAGAGCTTTTGTTCAACTTACGCCATTGGAAGTTACATCATGAAATACTTAACGCTCATCATTTTGACAAAACTCTTGTGAGATCCCATATTGGTTGGAGAGGTGAAAAAAACCTTCCTTATAAGGGTGTAGAAACTTCTCCCTAGCAGACGCGTTTTAAAGCCTTGAGGAAAAGCCCAAAGAGGACAATATATGTTAGCGGTGAGCTTGGGTAGTTTATAAATGGTATTAGAGCCAGTCACTGGAAAGTGTGCTAGCGAGAATGCTGGATCTCCAAGGGGGGTGGATTGTAAGATCTCACATCAGTTGGAGAGGGAAACGAAACATTCTTTATAAGGGTATGGAAACCTCTCCCTAGCATACACGTTTTAAAACCTTGAGGGAAAGCCAAGAAGGAAAAGTCCAACGAAGACAATATCTGCTAGCGGTGGGCTTGGGTAGTTACAAACGTATTAGAGATAGTCATTGGATGGTTTGCTAGCGAGGACGTTGGACCTCCAAGGGGGATGGACTATGAGATCCCATATCGGTTGTTGAGGGGAAGAAAACATTCCTTATAAGGGTGTGGAAACCTCTCTCTAGCATACGCGTTTTAAAACCTTGAGGGGAAGCTCAAAAAGAAAAATCCAAAGAAGACAATATTTTCTAGCTGTGGGTTTGAGCTGTTACAACTCTGTACATCATTATTACTATATTTTGTTTCCTAAACCCTGTTGGAATGTTAGACTCTCTGATTTGCATGTCTCATTGACGTTGTACAGCCATAACCGGGTCCGAAACAGTTTCTGAAGAAACAAAACCTTCCAGTTCGGCCAGCCAACTTATCCCAAATTTGCAGGAGGTAAACTTGGCGTTCTTTTATGAGTTAAAAGTTTAGTCAATAAGTAGACTGGAGCTTTTTGCTTGTTCTCTACTGGTTGGGAAGAGGAAATATAAGGGTGATGGCGGCATCAGAAAGTTGCTTAGTGTGATGGAAAATCTTCGATATTAGAGGGATCAGCGTATGGGTAGCTTTATACGTTTATCGAGCATTGGATTCTCGTGTATATTGTGGATTGAAATTGGGAAAATAAACATTTTCAACAAGCTTTTACTTTCTTCTATGCTTTGTTGGATTTGTATGATGATGTTTCCGTACTGAAATCGCTCGTTTATTCGAAGTAACCTTGTCGTTTGGGAATCTTAACATACTTTTCATTCGAGTATGCAGGTGGAAACCCTGCTCACAAACATATGTGACACATCTTCGATTGCAGAGTTCGAATTGAAAGTATGTAGTGTTGCACTGTTTTTAACTACGATTGCTCTGTCTCAATCTCAAATACTTTCCTTCTCCTTCTGCAATCAGCTCAAAGGATTCAAGTTGCAGATAGTGAGGGCTTTAAAAAGCGAAAATGTACCTCTTCCTCCAGTTCCAGAACCAGCTCCAGCTCCAGCTCCTGATATTCAAAGTGCAAGTTCTATACAATCGGATTCAAACGGAACGGTTAAAACAACATCATTGGCTTTATTCAAACCAGAACCTGTTTCTTCTTCGTCTCCGGAGGGGATCTCCAGATTTGTAGAGAGAGCTAGAGATGAAGGCCTAGCAATACTTTCATCTCCTAAAGTAAGCATACAACGTTTTTTGCTTATTTTCTTCTTGCCCAAGTCATGGATGGTGAGGTGAGGTGAGATTTGAATGCAGGTTGGGTTTTTTAGGCGGTGTCGAACCATAAAAGGCAAGCTTGCTCCGCCGTCTTGTAAAGAGGTATGTTGAATCCACACGCCCCCACAAAGGAGAAAAGAAACTTGGGAGAGTTCATAGGTTATATTGCGTTCTATTTAGCTGCTTCTGGTCTGCTGCATTTTGATCTTCCCATTTGCTTTTAGCATTAGACATGTTTATTGCCGTGATGAAATAAGATCCTACATCGGTTGGAGAGGAAAACGGAATGTTCCTTATAAGGGTGTGGAAATCTCTCTCTAGCAGATGCGTTTTAAAACCGTGTGGAAATATCTATGGCTTGGGCTGTTACAAATGGTATCAGAGCTAGACACCTCGCAGTGTGCTAGCGAGGGTGTTGGGCTCTCAAGGGGGGTGGGCTGTAAGATTCCACATCGGTTGGAGAGTGTAACGAAACATTCCTTATAAAGGTGTGGAAACCTCTCCCTAATAGACGTGTTTTAAAAACTTTAAGGAGAAACTCGAAAGGGAAAGTTCATAAGGGACAATATCTGCTAGCGATTGGCTTGGGCTGTTGCACCAAACTTCACTAACATTGATTCACTAAACAGAACCAGGTTGTAAAAGAGGGTCAAGTGCTTTGTTTCATTGATCAGTTAAGTGCCGAGATCCCTATCGAGGTTCGAGTCTTGTCTTTAAACTTCATTAGTCAGTACTGAGCCTGATTATATTCACATTATGCTCTCACTGTTCTTGCATGATGTTTCTTCGTTTCATTTTGCAGTCGGACATATCTGGAGAAGTCGTGAAGATACTGCGCAAGGATGGCGGTAAGTCGGTTTTCGATGTTTTTCTTCTTCTACCCTTTAATACGCTGTAGTTTCATGAACAATGGCTCAGCAATTCACCATTTTCATGACAGAGGCTGTTGGATATGGTGATGCTCTTATTGCAATTCTGCCTTCATTTCCTGGGATAAAGAAGCTTCAGTAGATTGCTTCCAAATCAAAGCAATACTCTCTTAGATTCTATGCCTCTAGATTGCTTATACATTCCATTTCACTCTCATTTCAATAAACAAATTTCTGCATTGAACTTTTAGGATTTAGCCGTTGAACTTGTAGGAATTTCTATTACGTTCATAAAATTTTGGACTTTCAATTTTTTTCTTTTGCATGTATTAAATGTTTGAGTGAGCTTTACCGTTCATCGTTCATCTAATGGGTTTCAATTTGTATCACTTAACTTTTCGGTTTTGTGTTTAATATGTGTCATCACTTGTAAATTTGCT ATGTTGGGGCCCACAAGTGTTGGCCCATACTCTGAACTCCTCTGCCCATCGTTCTTGGAGCTTCTTTACTCTGTAATGGCGTCCTGCAGCTTGAGAACTGCAGACTTTAAAGTCTTCAGGTTGGATGTTTGTAGGGAAAGAGTCTCTACTTTACCATCTTGTAGCTTAAGAAATTGGAGCAGGACACCGCAGCGATATTCGAGTTTGATAATATCATGTTCGTCTCGAAGAGATTTGCGCGCTTGTTGTAATGCATCGCCTGAGACCCGGACCATAACCGGGTCCGAAACAGTTTCTGAAGAAACAAAACCTTCCAGTTCGGCCAGCCAACTTATCCCAAATTTGCAGGAGGTGGAAACCCTGCTCACAAACATATGTGACACATCTTCGATTGCAGAGTTCGAATTGAAACTCAAAGGATTCAAGTTGCAGATAGTGAGGGCTTTAAAAAGCGAAAATGTACCTCTTCCTCCAGTTCCAGAACCAGCTCCAGCTCCAGCTCCTGATATTCAAAGTGCAAGTTCTATACAATCGGATTCAAACGGAACGGTTAAAACAACATCATTGGCTTTATTCAAACCAGAACCTGTTTCTTCTTCGTCTCCGGAGGGGATCTCCAGATTTGTAGAGAGAGCTAGAGATGAAGGCCTAGCAATACTTTCATCTCCTAAAGTTGGGTTTTTTAGGCGGTGTCGAACCATAAAAGGCAAGCTTGCTCCGCCGTCTTGTAAAGAGAACCAGGTTGTAAAAGAGGGTCAAGTGCTTTGTTTCATTGATCAGTTAAGTGCCGAGATCCCTATCGAGTCGGACATATCTGGAGAAGTCGTGAAGATACTGCGCAAGGATGGCGAGGCTGTTGGATATGGTGATGCTCTTATTGCAATTCTGCCTTCATTTCCTGGGATAAAGAAGCTTCAGTAGATTGCTTCCAAATCAAAGCAATACTCTCTTAGATTCTATGCCTCTAGATTGCTTATACATTCCATTTCACTCTCATTTCAATAAACAAATTTCTGCATTGAACTTTTAGGATTTAGCCGTTGAACTTGTAGGAATTTCTATTACGTTCATAAAATTTTGGACTTTCAATTTTTTTCTTTTGCATGTATTAAATGTTTGAGTGAGCTTTACCGTTCATCGTTCATCTAATGGGTTTCAATTTGTATCACTTAACTTTTCGGTTTTGTGTTTAATATGTGTCATCACTTGTAAATTTGCT ATGTTGGGGCCCACAAGTGTTGGCCCATACTCTGAACTCCTCTGCCCATCGTTCTTGGAGCTTCTTTACTCTGTAATGGCGTCCTGCAGCTTGAGAACTGCAGACTTTAAAGTCTTCAGGTTGGATGTTTGTAGGGAAAGAGTCTCTACTTTACCATCTTGTAGCTTAAGAAATTGGAGCAGGACACCGCAGCGATATTCGAGTTTGATAATATCATGTTCGTCTCGAAGAGATTTGCGCGCTTGTTGTAATGCATCGCCTGAGACCCGGACCATAACCGGGTCCGAAACAGTTTCTGAAGAAACAAAACCTTCCAGTTCGGCCAGCCAACTTATCCCAAATTTGCAGGAGGTGGAAACCCTGCTCACAAACATATGTGACACATCTTCGATTGCAGAGTTCGAATTGAAACTCAAAGGATTCAAGTTGCAGATAGTGAGGGCTTTAAAAAGCGAAAATGTACCTCTTCCTCCAGTTCCAGAACCAGCTCCAGCTCCAGCTCCTGATATTCAAAGTGCAAGTTCTATACAATCGGATTCAAACGGAACGGTTAAAACAACATCATTGGCTTTATTCAAACCAGAACCTGTTTCTTCTTCGTCTCCGGAGGGGATCTCCAGATTTGTAGAGAGAGCTAGAGATGAAGGCCTAGCAATACTTTCATCTCCTAAAGTTGGGTTTTTTAGGCGGTGTCGAACCATAAAAGGCAAGCTTGCTCCGCCGTCTTGTAAAGAGAACCAGGTTGTAAAAGAGGGTCAAGTGCTTTGTTTCATTGATCAGTTAAGTGCCGAGATCCCTATCGAGTCGGACATATCTGGAGAAGTCGTGAAGATACTGCGCAAGGATGGCGAGGCTGTTGGATATGGTGATGCTCTTATTGCAATTCTGCCTTCATTTCCTGGGATAAAGAAGCTTCAGTAG MLGPTSVGPYSELLCPSFLELLYSVMASCSLRTADFKVFRLDVCRERVSTLPSCSLRNWSRTPQRYSSLIISCSSRRDLRACCNASPETRTITGSETVSEETKPSSSASQLIPNLQEVETLLTNICDTSSIAEFELKLKGFKLQIVRALKSENVPLPPVPEPAPAPAPDIQSASSIQSDSNGTVKTTSLALFKPEPVSSSSPEGISRFVERARDEGLAILSSPKVGFFRRCRTIKGKLAPPSCKENQVVKEGQVLCFIDQLSAEIPIESDISGEVVKILRKDGEAVGYGDALIAILPSFPGIKKLQ
BLAST of CmaCh17G008440 vs. Swiss-Prot
Match: BCCP_NOSS1 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=accB PE=1 SV=2) HSP 1 Score: 65.5 bits (158), Expect = 1.2e-09 Identity = 60/195 (30.77%), Postives = 91/195 (46.67%), Query Frame = 1
BLAST of CmaCh17G008440 vs. TrEMBL
Match: A0A0A0KA77_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G433220 PE=4 SV=1) HSP 1 Score: 380.6 bits (976), Expect = 1.8e-102 Identity = 202/282 (71.63%), Postives = 232/282 (82.27%), Query Frame = 1
BLAST of CmaCh17G008440 vs. TrEMBL
Match: A0A0S3SFD9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G014900 PE=4 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 7.3e-67 Identity = 154/290 (53.10%), Postives = 193/290 (66.55%), Query Frame = 1
BLAST of CmaCh17G008440 vs. TrEMBL
Match: V7C1E7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G175100g PE=4 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 2.8e-66 Identity = 149/281 (53.02%), Postives = 183/281 (65.12%), Query Frame = 1
BLAST of CmaCh17G008440 vs. TrEMBL
Match: M5WUU1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009827mg PE=4 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 2.8e-66 Identity = 148/278 (53.24%), Postives = 188/278 (67.63%), Query Frame = 1
BLAST of CmaCh17G008440 vs. TrEMBL
Match: M5WT43_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009827mg PE=4 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 8.1e-66 Identity = 147/278 (52.88%), Postives = 188/278 (67.63%), Query Frame = 1
BLAST of CmaCh17G008440 vs. TAIR10
Match: AT3G15690.2 (AT3G15690.2 Single hybrid motif superfamily protein) HSP 1 Score: 218.8 bits (556), Expect = 4.7e-57 Identity = 135/283 (47.70%), Postives = 175/283 (61.84%), Query Frame = 1
BLAST of CmaCh17G008440 vs. TAIR10
Match: AT1G52670.1 (AT1G52670.1 Single hybrid motif superfamily protein) HSP 1 Score: 211.5 bits (537), Expect = 7.5e-55 Identity = 129/283 (45.58%), Postives = 172/283 (60.78%), Query Frame = 1
BLAST of CmaCh17G008440 vs. TAIR10
Match: AT3G56130.1 (AT3G56130.1 biotin/lipoyl attachment domain-containing protein) HSP 1 Score: 129.4 bits (324), Expect = 3.8e-30 Identity = 84/230 (36.52%), Postives = 127/230 (55.22%), Query Frame = 1
BLAST of CmaCh17G008440 vs. NCBI nr
Match: gi|659122330|ref|XP_008461084.1| (PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic isoform X1 [Cucumis melo]) HSP 1 Score: 414.1 bits (1063), Expect = 2.2e-112 Identity = 227/303 (74.92%), Postives = 252/303 (83.17%), Query Frame = 1
BLAST of CmaCh17G008440 vs. NCBI nr
Match: gi|449436116|ref|XP_004135840.1| (PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic [Cucumis sativus]) HSP 1 Score: 380.6 bits (976), Expect = 2.6e-102 Identity = 202/282 (71.63%), Postives = 232/282 (82.27%), Query Frame = 1
BLAST of CmaCh17G008440 vs. NCBI nr
Match: gi|659122332|ref|XP_008461085.1| (PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic isoform X2 [Cucumis melo]) HSP 1 Score: 288.5 bits (737), Expect = 1.4e-74 Identity = 154/188 (81.91%), Postives = 167/188 (88.83%), Query Frame = 1
BLAST of CmaCh17G008440 vs. NCBI nr
Match: gi|950964699|ref|XP_014498647.1| (PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase [Vigna radiata var. radiata]) HSP 1 Score: 271.2 bits (692), Expect = 2.3e-69 Identity = 155/285 (54.39%), Postives = 192/285 (67.37%), Query Frame = 1
BLAST of CmaCh17G008440 vs. NCBI nr
Match: gi|645244954|ref|XP_008228653.1| (PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic [Prunus mume]) HSP 1 Score: 270.0 bits (689), Expect = 5.0e-69 Identity = 151/282 (53.55%), Postives = 193/282 (68.44%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |