Cucsa.101790 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.101790
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
Description50S ribosomal protein L13, putative
Locationscaffold00927 : 974609 .. 978584 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCTCTCTATGCTCTAAACCCTCCCTCCAATTTTCAGCCACTGCACACTGCCGCCGCTCTTGCCCGACTCCGGCTCAGCGGCTGCCCTCGCACACTGCACTCTCAGCTGCCGCAGATATATTCTTCCCACGAACTCCCCGCTGCTCCTTCCGTCTCTCCGAGCATTCTGAGTTACTTATCTCTATCTTTCTCTCTCAGAATCACCGAGGTTCAGCCCCTCCACGCCGTTGGTGAGATCGCGCCGCCTTCGTTTATTGTTCAGATCCCCAAGGTTTTAGATTTTTTTTTTGTTTATTGGTTGGTTATCTTCACCCACAGAGAAGAAAATAAAAAAAAATTGTTTATAATTTTTTTTTCAACCCCCAGTCTAAATGATAACATAAAATTGAGAATGTGTAATCACAGGCTAGAGGGATGACAAGGAGCATATTAATCTTATATAAATCAATAATAATAATAATAATAATAACTTGTTGGAACTAAAAAGTTGCTCTGTGGGTGAAGAAATTTGTATTTGAAAATATTGGAAAAATTGTTTTGATGTTAATTGTTATTAGTTGAGGGTACTGATAAATGTCTTGTTGTGATGCGGAACAGTGAAAAGGTAGGACATTGAGAAATGGCAAGCCAAGCAGCTACTTCTATCACTGGCAACATGAAGGCAAGCCTTCTGTACTTTTACACCAATACATATTAATCATACGAAATGGTTGTGGAATGCATATTGTAGATTTAAGTTGTGCTTTTGGTTATGCGTGTTCTTGGTCAGTTGGTTTTAAAAATGATATTGTCTACTCTATCAGCTCTTGTTTCACAATCTCATGCTAGAGTTTGGGGAAATCTTTTATGCTACAGTTGGGGAACTGTTTGCTTGGAAACTCAGGTGGACCTGTTGCTGAACTTTATTTGATAAGAAACGTTGAATTAATAAAGAAGAACAATATTTCTATGCTAGGTTTGATTAGGGTTTACGTTCTGAACATTTAGAAACTGTTGTATTGTGTTTATTGTTACATTTTATTCGGGTAATTACCGCGTCTTTATAGGGTAAGGTGGTTAGATTTCCTTATGTCAGATCATTCTTAGTGTTACAGACTTCGAACATGCCTTCCCATGGTGTTTTATGTTAGCCATTAAATGATATTTTCTTCATGCACTGTTTGAAAATTAAGCTATCTTATGAATTTTGGTTTTCTATATATTTAGTTTTTCATCGTTTTTATTGATAACACCTGCCAGTTTCTTTAAATTGGATGAGGGGGGATTTTGGCACAGGCAATTTTAGAAAAAGGAGTAGGGCCTTTCTCCAAGTGGGTTTTGGAGATTCTATAAAGGACTATTTGGCATTCTATTATTAAAGAGAATACGTGTAGGATTTGGATGATTCATGAAGGAAAATTTCTATAGTAGCTGAAGAAGCCAGCGTTGTTTTCAATGACTTAAGTTACTATCTAATCGACAAGTGGCAGAAGAATGTAGAAGGCCCTTGGCTGGGCTTGGTACCTGTCTTCTCCAAGGATCCAAAGCTTTTGTACTATCATCAGTGATAAGCAGCAAGACACTAATAATTGCTAGATTTTTATCTTTTGAAGTAATTTGTGATTTAGAGAAATTTGAGACTGGTTTCATATGAGTGGAGCTGTAGAGATTCAGATTCCGCAAATACCTATTGTTAATAAATAAAAGAGGTAGTTAGACAAATTGACCTCTTTTCCCTCTTTTGTAAAGGACCTTAGCATACTTTTTAGAATATAAGTTCTCCCACTTCTATAGGTGAGCAAAGGAATTTACCCGCAAACCCAATATTAACTTGTAAGCTATTTGAAGGAGTAGCAAAATTCATTTTGTGATTGTCGTTGATGGTATAAATTCTGTAGGCAAAATTCCAGGAGATTCTCCTTGCTATATGAATACATTGTGTAGAAGGAGAAGTGAAGACTTAAAAACTGTATGTTGTGTTGATGCACTTCTAAGGACTTTCCAATGATTGAAGGAGCCTGTTTCCATGGATAATGAAGGAAGTTATGTTGGGATATGGGCGGGTTTATTTTAGCACTTAGGTTTCTCTGCTGTTATATGGATTATTTGATTAGAATGAGAAGAAATTTTTTATTTGGTTCTAAGTTATCAGCCAGGAACTTATGTAAGAATGAAATAGGAAGGCTTTCGTTTATAGTGGTTGGGATTTTATCCTCAATGAGTTTGGTCTGCCCTTGTGTCTTCCGGATCAGATTGATAGCCGGTTTAATTTCTCTTATTTTACTTAGCCTTTCCCCCGTGTTCTTTGAATAAGTGCTTTTGTTATACAAGCATAAACCATTAACATTGCTATGCATCAACAATGTTCCAGAAAGCACTTGCTGGCTTGAAACGCATCAATTTGGAAGGCCTGAGGTGGAGAGTGTTTGATGCCAAAGGCCAGGTTAGAATGCAATATTAACTCTTCACTTGATAGTAGGTTCCTCAGATTATGAGATAGAATGTTCAAGAGTAGTGATATTTGCTAGAAACAAAGAAAGATGCTCTAACTTTTTCTACCAGGTTCTTGGGAGATTGGCATCTCAAATATCTACTGTGATTCAAGGCAAGGATAAGCCAACATATGCACCCAATCGAGATGATGGGGATATGTGCATTGTGCTTAATGCTAAGGATATCGCTGTCACAGGAAGAAAACTCACTAAAAAAGTTTATTACTGGCATACAGGGTAAGTACTATATGTTTCTGTAGTTTTACTTAAAAAGTATTGGTCATTGGCACGTACTCTAAAGTTCGTTAATCTATTTTCATCAGTTAAGATTTCATTGGCATTTGTTTTGTTGAAATTTGAGGCAAAATTAGAACGGCATTAGTTTGTCGAAATTTTAGGCCCTGTTTGGTTCTTATTTTCAATTTCTTAAGTATCAGAGTTGAACTTTTAGCCAAATTTCACCAACAAAACACTTCTCCAAAAACTACTTTTTTTAGTTTTCAAACCACTACTTGCTTTTTAAGAACATTGATAAAAATTAGATAACCAAAAACAAAAAATCAAATGGTTATCAAAGAGGGGTTTAACTTTTGGTTAAATCTAAATGACTTAGAAGGCGTATTTGGATTACTTTTCTAAGACTTAAAAAAGAATTTTCTTCTCTTAAAAACCTTTTTCTAAAATCTTAAAAATTCAATCCAAACAAGTGCTTGATTTCTATCTGCAGAAAAGTAGAGGAAGGAGATCACTTTAGTGCTGCTTTGGTAATATAGTAACAGTTTGATGTGGTCTGTGTTTCATTATTTGTCTTCAACTATGCGTGGCCTTGTAGGTATGTTGGGAACCTGAAGGAAAGAACTTTGAGGGAACAGATGACCAGAGACCCTACAGAAGTCATACGTAAAGCTGTGTTACGCATGCTTCCAAAAAATAAACTGCGTGATGTTAGTCCTTAAATTTATTTGGTGTTTAAGATCTTCTGTTACCAATGGAGGACTACGTCAGTTGTTTATTAAATCTTCATCCTTTTTCATCCGCCATTGTACACTACAGGGTGGGTATTTATATTATAACTTCTATTTAATGCAGGATAGAGATCGAAAACTGAGAATTTTTGCTGGAGATGAACACCCTTTTGGCGACCGTCCACTGGAGCCCTATATCATGCCACCTCGTAATGTAAGAGAGATGCGTCCTCAGGTAAGACGGGCCATGATTCGAGCGCAAAAGATGGCCGAGCAACAACAAAACAACAAGAACGAAGGAAAGGAAAGTAGAAAGAAAGAAGAGAAGGTAGAAGTGACGGCCTGATTTCTTCTGTCCTTTGTGGGAGTTTTGTGTAGATCTGAATTAGCTTGGAATTTGATTGAATTGCATCAGAGCTGTCTTTAACGGAACCGTGTAACTGGGATTTGATATCATTTGTAAAGATATGATGCCATGTTTGTTCAATGCTTGGATATCCAAGGGAAACGTGTTTAGTTTCTTTTGCTTTAACTAATAA

mRNA sequence

ATTCTCTCTATGCTCTAAACCCTCCCTCCAATTTTCAGCCACTGCACACTGCCGCCGCTCTTGCCCGACTCCGGCTCAGCGGCTGCCCTCGCACACTGCACTCTCAGCTGCCGCAGATATATTCTTCCCACGAACTCCCCGCTGCTCCTTCCGTCTCTCCGAGCATTCTGAGTTACTTATCTCTATCTTTCTCTCTCAGAATCACCGAGGTTCAGCCCCTCCACGCCGTTGGTGAGATCGCGCCGCCTTCGTTTATTGTTCAGATCCCCAAGTGAAAAGGTAGGACATTGAGAAATGGCAAGCCAAGCAGCTACTTCTATCACTGGCAACATGAAGAAAGCACTTGCTGGCTTGAAACGCATCAATTTGGAAGGCCTGAGGTGGAGAGTGTTTGATGCCAAAGGCCAGGTTCTTGGGAGATTGGCATCTCAAATATCTACTGTGATTCAAGGCAAGGATAAGCCAACATATGCACCCAATCGAGATGATGGGGATATGTGCATTGTGCTTAATGCTAAGGATATCGCTGTCACAGGAAGAAAACTCACTAAAAAAGTTTATTACTGGCATACAGGGTATGTTGGGAACCTGAAGGAAAGAACTTTGAGGGAACAGATGACCAGAGACCCTACAGAAGTCATACGTAAAGCTGTGTTACGCATGCTTCCAAAAAATAAACTGCGTGATGATAGAGATCGAAAACTGAGAATTTTTGCTGGAGATGAACACCCTTTTGGCGACCGTCCACTGGAGCCCTATATCATGCCACCTCGTAATGTAAGAGAGATGCGTCCTCAGGTAAGACGGGCCATGATTCGAGCGCAAAAGATGGCCGAGCAACAACAAAACAACaagaacgaaggaaaggaaagtagaaagaaagaagagaaggtagaaGTGACGGCCTGATTTCTTCTGTCCTTTGTGGGAGTTTTGTGTAGATCTGAATTAGCTTGGAATTTGATTGAATTGCATCAGAGCTGTCTTTAACGGAACCGTGTAACTGGGATTTGATATCATTTGTAAAGATATGATGCCATGTTTGTTCAATGCTTGGATATCCAAGGGAAACGTGTTTAGTTTCTTTTGCTTTAACTAATAA

Coding sequence (CDS)

ATGGCAAGCCAAGCAGCTACTTCTATCACTGGCAACATGAAGAAAGCACTTGCTGGCTTGAAACGCATCAATTTGGAAGGCCTGAGGTGGAGAGTGTTTGATGCCAAAGGCCAGGTTCTTGGGAGATTGGCATCTCAAATATCTACTGTGATTCAAGGCAAGGATAAGCCAACATATGCACCCAATCGAGATGATGGGGATATGTGCATTGTGCTTAATGCTAAGGATATCGCTGTCACAGGAAGAAAACTCACTAAAAAAGTTTATTACTGGCATACAGGGTATGTTGGGAACCTGAAGGAAAGAACTTTGAGGGAACAGATGACCAGAGACCCTACAGAAGTCATACGTAAAGCTGTGTTACGCATGCTTCCAAAAAATAAACTGCGTGATGATAGAGATCGAAAACTGAGAATTTTTGCTGGAGATGAACACCCTTTTGGCGACCGTCCACTGGAGCCCTATATCATGCCACCTCGTAATGTAAGAGAGATGCGTCCTCAGGTAAGACGGGCCATGATTCGAGCGCAAAAGATGGCCGAGCAACAACAAAACAACAAGAACGAAGGAAAGGAAAGTAGAAAGAAAGAAGAGAAGGTAGAAGTGACGGCCTGA

Protein sequence

MASQAATSITGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGNLKERTLREQMTRDPTEVIRKAVLRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKMAEQQQNNKNEGKESRKKEEKVEVTA*
Homology
[Close]
BLAST of Cucsa.101790 vs. Swiss-Prot
Match: RL13_RUBXD (50S ribosomal protein L13 OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=rplM PE=3 SV=2)

HSP 1 Score: 139.0 bits (349), Expect = 5.6e-32
Identity = 63/127 (49.61%), Postives = 91/127 (71.65%), Query Frame = 1 

Query: 29  RWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLNAKDIAVTGRKLTKKV 88
           +W V DA+G+ LGRLA++IS +++GK+KP Y P+ D GD  +V+NA  + VTGRK  +KV
Sbjct: 14  KWYVIDAEGKTLGRLAAEISRLLRGKNKPQYTPHVDVGDFVVVVNADKVEVTGRKAEQKV 73

Query: 89  YYWHTGYVGNLKERTLREQMTRDPTEVIRKAVLRMLPKNKLRDDRDRKLRIFAGDEHPFG 148
           Y WHTGY G L+ER+ R+ + + P E++R+AV  M+PK +L   + +KLRI+AG EHP  
Sbjct: 74  YRWHTGYPGGLRERSYRQMLRKRPEEILRQAVRGMMPKTRLARRQLKKLRIYAGPEHPHA 133

Query: 149 DRPLEPY 156
            +  EPY
Sbjct: 134 GQTPEPY 140

[Close]
BLAST of Cucsa.101790 vs. Swiss-Prot
Match: RL13_AQUAE (50S ribosomal protein L13 OS=Aquifex aeolicus (strain VF5) GN=rplM PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.4e-30
Identity = 65/126 (51.59%), Postives = 87/126 (69.05%), Query Frame = 1 

Query: 29  RWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLNAKDIAVTGRKLTKKV 88
           +W V DA G+ LGRLAS+I+ +++GK KP Y P+ D GD  IV+NA+ I VTG+KL +K 
Sbjct: 14  KWWVVDATGKTLGRLASEIAKILRGKHKPYYQPDVDCGDFVIVINAEKIRVTGKKLEQKK 73

Query: 89  YYWHTGYVGNLKERTLREQMTRDPTEVIRKAVLRMLPKNKLRDDRDRKLRIFAGDEHPFG 148
           YYWH+ Y G LKERTL+  +   P EVIR AV RMLPKN+L     +KL+++ G EHP  
Sbjct: 74  YYWHSRYPGGLKERTLKWMLENKPEEVIRLAVKRMLPKNRLGHRMLKKLKVYRGPEHPHQ 133

Query: 149 DRPLEP 155
            +  +P
Sbjct: 134 AQKPQP 139

[Close]
BLAST of Cucsa.101790 vs. Swiss-Prot
Match: RL13_CHLAD (50S ribosomal protein L13 OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=rplM PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 6.9e-30
Identity = 64/127 (50.39%), Postives = 87/127 (68.50%), Query Frame = 1 

Query: 30  WRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLNAKDIAVTGRKLTKKVY 89
           W V DA G+VLGRLA+QIST+++GK KPT+ P+ D GD  IV+NA+ I +TGRK  +K+Y
Sbjct: 15  WYVIDASGKVLGRLATQISTLLRGKHKPTFTPSIDGGDFVIVVNAEKIVLTGRKPEQKIY 74

Query: 90  YWHTGYVGNLKERTLREQMTRDPTEVIRKAVLRMLPKNKLRDDRDRKLRIFAGDEHPFGD 149
           Y H+GY G LKE   +  + + P  ++R AV RMLPKN++      KLRI+AG  HP   
Sbjct: 75  YRHSGYPGGLKEIPYKMMLAKHPERILRLAVKRMLPKNRMGRRLLSKLRIYAGPNHPHAA 134

Query: 150 RPLEPYI 157
           +  +PYI
Sbjct: 135 QQPKPYI 141

[Close]
BLAST of Cucsa.101790 vs. Swiss-Prot
Match: RL13_PEPD6 (50S ribosomal protein L13 OS=Peptoclostridium difficile (strain 630) GN=rplM PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 9.0e-30
Identity = 62/117 (52.99%), Postives = 86/117 (73.50%), Query Frame = 1 

Query: 29  RWRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLNAKDIAVTGRKLTKKV 88
           +W + DA+G+ LGRLA++I+TV++GK KPT+ P+ D GD  +V+NA+ I ++G+KL +K 
Sbjct: 14  KWYLVDAEGKTLGRLATEIATVLRGKHKPTFTPHVDGGDFVVVVNAEKIVLSGKKLDQKY 73

Query: 89  YYWHTGYVGNLKERTLREQMTRDPTEVIRKAVLRMLPKNKLRDDRDRKLRIFAGDEH 146
           Y +HTGYVG LKE + R+ M + P EVI  AV  MLPKNKLR     +LR+FAG EH
Sbjct: 74  YRYHTGYVGGLKEISYRDMMDKKPEEVISHAVSGMLPKNKLRSRMMTRLRVFAGAEH 130

[Close]
BLAST of Cucsa.101790 vs. Swiss-Prot
Match: RL13_CHLSY (50S ribosomal protein L13 OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=rplM PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-29
Identity = 63/127 (49.61%), Postives = 86/127 (67.72%), Query Frame = 1 

Query: 30  WRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLNAKDIAVTGRKLTKKVY 89
           W V DA G+VLGRLA+QIST+++GK KPT+ P+ D GD  IV+NA+ I +TGRK  +K+Y
Sbjct: 15  WYVIDASGKVLGRLATQISTLLRGKHKPTFTPSIDGGDFVIVVNAEKIVLTGRKPDQKIY 74

Query: 90  YWHTGYVGNLKERTLREQMTRDPTEVIRKAVLRMLPKNKLRDDRDRKLRIFAGDEHPFGD 149
           Y HTGY G +K    +  + + P  ++R AV RMLPKN++      KLRI+AG  HP   
Sbjct: 75  YRHTGYPGGIKATPYKMMLAKHPDRILRLAVKRMLPKNRMGRRLLSKLRIYAGPNHPHAA 134

Query: 150 RPLEPYI 157
           +  +PYI
Sbjct: 135 QQPKPYI 141

[Close]
BLAST of Cucsa.101790 vs. TrEMBL
Match: A0A0A0KL19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487720 PE=3 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 2.5e-111
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1 

Query: 1   MASQAATSITGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYA 60
           MASQAATSITGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYA
Sbjct: 1   MASQAATSITGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYA 60

Query: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGNLKERTLREQMTRDPTEVIRKAV 120
           PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGNLKERTLREQMTRDPTEVIRKAV
Sbjct: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGNLKERTLREQMTRDPTEVIRKAV 120

Query: 121 LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKMA 180
           LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKMA
Sbjct: 121 LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKMA 180

Query: 181 EQQQNNKNEGKESRKKEEKVEVTA 205
           EQQQNNKNEGKESRKKEEKVEVTA
Sbjct: 181 EQQQNNKNEGKESRKKEEKVEVTA 204

[Close]
BLAST of Cucsa.101790 vs. TrEMBL
Match: V4U8B9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016747mg PE=3 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 8.9e-93
Identity = 168/204 (82.35%), Postives = 188/204 (92.16%), Query Frame = 1 

Query: 1   MASQAATSITGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYA 60
           MA+QAAT+ +GNMKKALAGL+RINLEGLRWRVFDAKGQVLGRLASQ++TV+QGKDKPTYA
Sbjct: 1   MANQAATAFSGNMKKALAGLRRINLEGLRWRVFDAKGQVLGRLASQVATVVQGKDKPTYA 60

Query: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGNLKERTLREQMTRDPTEVIRKAV 120
           PNRDDGDMCIVLNAKDI VTGRKL  KVYYWHTGY+G+LKERTL+EQM RDPTE IRKAV
Sbjct: 61  PNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAV 120

Query: 121 LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKMA 180
           LRMLP+NKLRDDRDRKLRIF G EHPFGDRPLEPY+MPPR VRE+RP+VRRAMIR QK A
Sbjct: 121 LRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEPYVMPPRRVRELRPRVRRAMIREQKKA 180

Query: 181 EQQQNNKNEGKESRKKEEKVEVTA 205
           E QQ+NK + +++RKKE + EVTA
Sbjct: 181 EMQQSNK-DMRKNRKKEVEAEVTA 203

[Close]
BLAST of Cucsa.101790 vs. TrEMBL
Match: A0A067EP51_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028816mg PE=3 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 8.9e-93
Identity = 168/204 (82.35%), Postives = 188/204 (92.16%), Query Frame = 1 

Query: 1   MASQAATSITGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYA 60
           MA+QAAT+ +GNMKKALAGL+RINLEGLRWRVFDAKGQVLGRLASQ++TV+QGKDKPTYA
Sbjct: 1   MANQAATAFSGNMKKALAGLRRINLEGLRWRVFDAKGQVLGRLASQVATVVQGKDKPTYA 60

Query: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGNLKERTLREQMTRDPTEVIRKAV 120
           PNRDDGDMCIVLNAKDI VTGRKL  KVYYWHTGY+G+LKERTL+EQM RDPTE IRKAV
Sbjct: 61  PNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAV 120

Query: 121 LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKMA 180
           LRMLP+NKLRDDRDRKLRIF G EHPFGDRPLEPY+MPPR VRE+RP+VRRAMIR QK A
Sbjct: 121 LRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEPYVMPPRRVRELRPRVRRAMIREQKKA 180

Query: 181 EQQQNNKNEGKESRKKEEKVEVTA 205
           E QQ+NK + +++RKKE + EVTA
Sbjct: 181 EMQQSNK-DMRKNRKKEVEAEVTA 203

[Close]
BLAST of Cucsa.101790 vs. TrEMBL
Match: A0A061FIY2_THECC (Ribosomal protein L13 family protein OS=Theobroma cacao GN=TCM_035802 PE=3 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.1e-90
Identity = 163/205 (79.51%), Postives = 186/205 (90.73%), Query Frame = 1 

Query: 1   MASQAA-TSITGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTY 60
           MA+QAA T+  GN+KKALAGL+RINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKP Y
Sbjct: 1   MATQAAATTFNGNLKKALAGLRRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPIY 60

Query: 61  APNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGNLKERTLREQMTRDPTEVIRKA 120
           APNRDDGDMCIV+NAKD+ VTGRKLT K YYWHTGYVGNLKER+L++QM +DPTEVIRKA
Sbjct: 61  APNRDDGDMCIVINAKDVCVTGRKLTDKFYYWHTGYVGNLKERSLKDQMAKDPTEVIRKA 120

Query: 121 VLRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKM 180
           VLRMLP+NKLRDDRDRKLRIFA  EHPFGDRPL+PY+MPPR VREMRP+ RRA+IRAQK 
Sbjct: 121 VLRMLPRNKLRDDRDRKLRIFANSEHPFGDRPLKPYVMPPRTVREMRPRARRALIRAQKK 180

Query: 181 AEQQQNNKNEGKESRKKEEKVEVTA 205
           AE+Q+   N+ ++ ++KE K+EVTA
Sbjct: 181 AEEQEQGGNQSRKGKRKEAKMEVTA 205

[Close]
BLAST of Cucsa.101790 vs. TrEMBL
Match: M5XDK1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011613mg PE=3 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 1.2e-89
Identity = 162/204 (79.41%), Postives = 185/204 (90.69%), Query Frame = 1 

Query: 1   MASQAATSITGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYA 60
           MASQAATS  GN+KKALAGL+RI+L+GLRW+VFDAKGQVLGRLASQISTVIQGKDKPTYA
Sbjct: 1   MASQAATSFNGNLKKALAGLRRIDLDGLRWKVFDAKGQVLGRLASQISTVIQGKDKPTYA 60

Query: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGNLKERTLREQMTRDPTEVIRKAV 120
           PNRDDGDMCIVLNAKD+ VTGRKLT KVY+WHTGY+G+LKERTL++QM +DPTEVIRKAV
Sbjct: 61  PNRDDGDMCIVLNAKDVCVTGRKLTDKVYHWHTGYIGHLKERTLKDQMAKDPTEVIRKAV 120

Query: 121 LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKMA 180
           LRMLP+NKLRDDRDRKLRIF G EHPFGDRPLEPY+MP R VREMRP+ RRAM+RAQK A
Sbjct: 121 LRMLPRNKLRDDRDRKLRIFVGGEHPFGDRPLEPYLMPSRQVREMRPRTRRAMVRAQKKA 180

Query: 181 EQQQNNKNEGKESRKKEEKVEVTA 205
           EQQQ + N+ +  ++K ++ EV A
Sbjct: 181 EQQQQDANDPRRGKRK-DRPEVNA 203

[Close]
BLAST of Cucsa.101790 vs. TAIR10
Match: AT3G01790.1 (AT3G01790.1 Ribosomal protein L13 family protein)

HSP 1 Score: 308.5 bits (789), Expect = 3.0e-84
Identity = 148/198 (74.75%), Postives = 171/198 (86.36%), Query Frame = 1 

Query: 1   MASQAAT--SITGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPT 60
           MA+QAA   S  GN+KKA+AG+KRINL+GLRWRVFDA+GQVLGRLASQISTV+Q KDKPT
Sbjct: 1   MATQAAAAASFKGNLKKAVAGIKRINLDGLRWRVFDARGQVLGRLASQISTVLQAKDKPT 60

Query: 61  YAPNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGNLKERTLREQMTRDPTEVIRK 120
           Y PNRDDGD+CIVLNAK+I  TGRKLT K Y WHTGY+G+LKER+L++QM +DPTEVIRK
Sbjct: 61  YCPNRDDGDICIVLNAKEIGFTGRKLTDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRK 120

Query: 121 AVLRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQK 180
           AV RMLP N LRDDRDRKLRIF G EHPFGD+PLEP++MPPR VREMRP+ RRAMIRAQK
Sbjct: 121 AVWRMLPSNNLRDDRDRKLRIFEGGEHPFGDKPLEPFVMPPRRVREMRPRARRAMIRAQK 180

Query: 181 MAEQQQNNKNEGKESRKK 197
            AEQ +N   E K+ +K+
Sbjct: 181 KAEQAENEGTEVKKGKKR 198

[Close]
BLAST of Cucsa.101790 vs. TAIR10
Match: AT1G78630.1 (AT1G78630.1 Ribosomal protein L13 family protein)

HSP 1 Score: 89.7 bits (221), Expect = 2.2e-18
Identity = 50/135 (37.04%), Postives = 78/135 (57.78%), Query Frame = 1 

Query: 30  WRVFDAKGQVLGRLASQISTVIQGKDKPTYAPNRDDGDMCIVLNAKDIAVTGRKLTKKVY 89
           W V DA  ++LGRLAS I+  I+GK+  +Y P+ D G   IV+NA+ +AV+G+K  +K+Y
Sbjct: 105 WFVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLY 164

Query: 90  YWHTGYVGNLKERTLREQMTRDPTEVIRKAVLRMLPKNKLRDDRDRKLRIFAGDEHPF-G 149
             H+G  G +   T  +   R P  ++  AV  MLPK +L       L+++ G +HP   
Sbjct: 165 RRHSGRPGGMTVETFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEA 224

Query: 150 DRPLEPYIMPPRNVR 164
            +PL+   +P R+ R
Sbjct: 225 QKPLD---LPIRDKR 236

[Close]
BLAST of Cucsa.101790 vs. NCBI nr
Match: gi|778718104|ref|XP_011657807.1| (PREDICTED: 50S ribosomal protein L13, chloroplastic [Cucumis sativus])

HSP 1 Score: 409.5 bits (1051), Expect = 3.6e-111
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1 

Query: 1   MASQAATSITGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYA 60
           MASQAATSITGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYA
Sbjct: 1   MASQAATSITGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYA 60

Query: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGNLKERTLREQMTRDPTEVIRKAV 120
           PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGNLKERTLREQMTRDPTEVIRKAV
Sbjct: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGNLKERTLREQMTRDPTEVIRKAV 120

Query: 121 LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKMA 180
           LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKMA
Sbjct: 121 LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKMA 180

Query: 181 EQQQNNKNEGKESRKKEEKVEVTA 205
           EQQQNNKNEGKESRKKEEKVEVTA
Sbjct: 181 EQQQNNKNEGKESRKKEEKVEVTA 204

[Close]
BLAST of Cucsa.101790 vs. NCBI nr
Match: gi|659079262|ref|XP_008440163.1| (PREDICTED: 50S ribosomal protein L13, chloroplastic [Cucumis melo])

HSP 1 Score: 383.6 bits (984), Expect = 2.1e-103
Identity = 191/204 (93.63%), Postives = 197/204 (96.57%), Query Frame = 1 

Query: 1   MASQAATSITGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYA 60
           MASQAA+SI GNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLAS+ISTVIQGKDKPTY 
Sbjct: 1   MASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYT 60

Query: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGNLKERTLREQMTRDPTEVIRKAV 120
           PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVG+LKERTLREQM RDPTEVIRKAV
Sbjct: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAV 120

Query: 121 LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKMA 180
           LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQK A
Sbjct: 121 LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKKA 180

Query: 181 EQQQNNKNEGKESRKKEEKVEVTA 205
           EQQ+N+K+E K SRKKEEKVEV A
Sbjct: 181 EQQENSKSERKGSRKKEEKVEVKA 204

[Close]
BLAST of Cucsa.101790 vs. NCBI nr
Match: gi|567909623|ref|XP_006447125.1| (hypothetical protein CICLE_v10016747mg [Citrus clementina])

HSP 1 Score: 347.8 bits (891), Expect = 1.3e-92
Identity = 168/204 (82.35%), Postives = 188/204 (92.16%), Query Frame = 1 

Query: 1   MASQAATSITGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYA 60
           MA+QAAT+ +GNMKKALAGL+RINLEGLRWRVFDAKGQVLGRLASQ++TV+QGKDKPTYA
Sbjct: 1   MANQAATAFSGNMKKALAGLRRINLEGLRWRVFDAKGQVLGRLASQVATVVQGKDKPTYA 60

Query: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGNLKERTLREQMTRDPTEVIRKAV 120
           PNRDDGDMCIVLNAKDI VTGRKL  KVYYWHTGY+G+LKERTL+EQM RDPTE IRKAV
Sbjct: 61  PNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAV 120

Query: 121 LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKMA 180
           LRMLP+NKLRDDRDRKLRIF G EHPFGDRPLEPY+MPPR VRE+RP+VRRAMIR QK A
Sbjct: 121 LRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEPYVMPPRRVRELRPRVRRAMIREQKKA 180

Query: 181 EQQQNNKNEGKESRKKEEKVEVTA 205
           E QQ+NK + +++RKKE + EVTA
Sbjct: 181 EMQQSNK-DMRKNRKKEVEAEVTA 203

[Close]
BLAST of Cucsa.101790 vs. NCBI nr
Match: gi|590601607|ref|XP_007019643.1| (Ribosomal protein L13 family protein [Theobroma cacao])

HSP 1 Score: 340.9 bits (873), Expect = 1.6e-90
Identity = 163/205 (79.51%), Postives = 186/205 (90.73%), Query Frame = 1 

Query: 1   MASQAA-TSITGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTY 60
           MA+QAA T+  GN+KKALAGL+RINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKP Y
Sbjct: 1   MATQAAATTFNGNLKKALAGLRRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPIY 60

Query: 61  APNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGNLKERTLREQMTRDPTEVIRKA 120
           APNRDDGDMCIV+NAKD+ VTGRKLT K YYWHTGYVGNLKER+L++QM +DPTEVIRKA
Sbjct: 61  APNRDDGDMCIVINAKDVCVTGRKLTDKFYYWHTGYVGNLKERSLKDQMAKDPTEVIRKA 120

Query: 121 VLRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKM 180
           VLRMLP+NKLRDDRDRKLRIFA  EHPFGDRPL+PY+MPPR VREMRP+ RRA+IRAQK 
Sbjct: 121 VLRMLPRNKLRDDRDRKLRIFANSEHPFGDRPLKPYVMPPRTVREMRPRARRALIRAQKK 180

Query: 181 AEQQQNNKNEGKESRKKEEKVEVTA 205
           AE+Q+   N+ ++ ++KE K+EVTA
Sbjct: 181 AEEQEQGGNQSRKGKRKEAKMEVTA 205

[Close]
BLAST of Cucsa.101790 vs. NCBI nr
Match: gi|645246260|ref|XP_008229271.1| (PREDICTED: 50S ribosomal protein L13, chloroplastic [Prunus mume])

HSP 1 Score: 338.6 bits (867), Expect = 7.7e-90
Identity = 162/204 (79.41%), Postives = 186/204 (91.18%), Query Frame = 1 

Query: 1   MASQAATSITGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYA 60
           MASQAATS  GN+KKALAGL+RI+L+GLRW+VFDAKGQVLGRLASQISTVIQGKDKPTYA
Sbjct: 1   MASQAATSFNGNLKKALAGLRRIDLDGLRWKVFDAKGQVLGRLASQISTVIQGKDKPTYA 60

Query: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGNLKERTLREQMTRDPTEVIRKAV 120
           PNRDDGDMCIVLNAKD+ VTGRKLT KVY+WHTGY+G+LKERTL++QM +DPTEVIRKAV
Sbjct: 61  PNRDDGDMCIVLNAKDVCVTGRKLTDKVYHWHTGYIGHLKERTLKDQMAKDPTEVIRKAV 120

Query: 121 LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKMA 180
           LRMLP+NKLRDDRDRKLRIF G EHPFGDRPLEPY+MPPR VREMRP+ RRAM+RAQK A
Sbjct: 121 LRMLPRNKLRDDRDRKLRIFVGGEHPFGDRPLEPYLMPPRQVREMRPRTRRAMVRAQKKA 180

Query: 181 EQQQNNKNEGKESRKKEEKVEVTA 205
           EQQ+ + N+ +  ++K ++ EV A
Sbjct: 181 EQQKQDVNDPRRGKRK-DRPEVNA 203

The following BLAST results are available for this feature:
BLAST of Cucsa.101790 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RL13_RUBXD5.6e-3249.6150S ribosomal protein L13 OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16... [more]
RL13_AQUAE2.4e-3051.5950S ribosomal protein L13 OS=Aquifex aeolicus (strain VF5) GN=rplM PE=3 SV=1[more]
RL13_CHLAD6.9e-3050.3950S ribosomal protein L13 OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN... [more]
RL13_PEPD69.0e-3052.9950S ribosomal protein L13 OS=Peptoclostridium difficile (strain 630) GN=rplM PE=... [more]
RL13_CHLSY1.2e-2949.6150S ribosomal protein L13 OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 6... [more]
BLAST of Cucsa.101790 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KL19_CUCSA2.5e-111100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487720 PE=3 SV=1[more]
V4U8B9_9ROSI8.9e-9382.35Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016747mg PE=3 SV=1[more]
A0A067EP51_CITSI8.9e-9382.35Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028816mg PE=3 SV=1[more]
A0A061FIY2_THECC1.1e-9079.51Ribosomal protein L13 family protein OS=Theobroma cacao GN=TCM_035802 PE=3 SV=1[more]
M5XDK1_PRUPE1.2e-8979.41Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011613mg PE=3 SV=1[more]
BLAST of Cucsa.101790 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G01790.13.0e-8474.75 Ribosomal protein L13 family protein[more]
AT1G78630.12.2e-1837.04 Ribosomal protein L13 family protein[more]
BLAST of Cucsa.101790 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778718104|ref|XP_011657807.1|3.6e-111100.00PREDICTED: 50S ribosomal protein L13, chloroplastic [Cucumis sativus][more]
gi|659079262|ref|XP_008440163.1|2.1e-10393.63PREDICTED: 50S ribosomal protein L13, chloroplastic [Cucumis melo][more]
gi|567909623|ref|XP_006447125.1|1.3e-9282.35hypothetical protein CICLE_v10016747mg [Citrus clementina][more]
gi|590601607|ref|XP_007019643.1|1.6e-9079.51Ribosomal protein L13 family protein [Theobroma cacao][more]
gi|645246260|ref|XP_008229271.1|7.7e-9079.41PREDICTED: 50S ribosomal protein L13, chloroplastic [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005822Ribosomal_L13
IPR005823Ribosomal_L13_bac-type
IPR005822Ribosomal_L13
IPR005823Ribosomal_L13_bac-type
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.101790.2Cucsa.101790.2mRNA
Cucsa.101790.1Cucsa.101790.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005822Ribosomal protein L13GENE3DG3DSA:3.90.1180.10coord: 29..149
score: 1.8
IPR005822Ribosomal protein L13HAMAPMF_01366Ribosomal_L13coord: 30..153
score: 26
IPR005822Ribosomal protein L13PIRPIRSF002181RPL13p_RPL13Aa_RPL16e_RPL13ocoord: 13..198
score: 1.8
IPR005822Ribosomal protein L13PANTHERPTHR11545RIBOSOMAL PROTEIN L13coord: 12..175
score: 7.3
IPR005822Ribosomal protein L13PFAMPF00572Ribosomal_L13coord: 29..147
score: 6.0
IPR005822Ribosomal protein L13unknownSSF52161Ribosomal protein L13coord: 29..151
score: 3.92
IPR005823Ribosomal protein L13, bacterial-typeTIGRFAMsTIGR01066TIGR01066coord: 29..147
score: 3.7
NoneNo IPR availableunknownCoilCoilcoord: 179..199
scor

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.101790Cla008513Watermelon (97103) v1cgywmB137
Cucsa.101790Csa6G487720Cucumber (Chinese Long) v2cgycuB121
Cucsa.101790MELO3C007496Melon (DHL92) v3.5.1cgymeB131
Cucsa.101790ClCG01G016260Watermelon (Charleston Gray)cgywcgB134
Cucsa.101790CSPI06G27420Wild cucumber (PI 183967)cgycpiB122
Cucsa.101790CmaCh07G007490Cucurbita maxima (Rimu)cgycmaB0235
Cucsa.101790CmoCh07G007710Cucurbita moschata (Rifu)cgycmoB0233
Cucsa.101790Lsi01G010470Bottle gourd (USVL1VR-Ls)cgylsiB125
Cucsa.101790Cp4.1LG19g11710Cucurbita pepo (Zucchini)cgycpeB0220
Cucsa.101790MELO3C007496.2Melon (DHL92) v3.6.1cgymedB131
Cucsa.101790CsaV3_6G042550Cucumber (Chinese Long) v3cgycucB126
Cucsa.101790Cla97C01G015260Watermelon (97103) v2cgywmbB127
Cucsa.101790Bhi03G001519Wax gourdcgywgoB155
Cucsa.101790Carg05258Silver-seed gourdcarcgyB0918
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.101790Melon (DHL92) v3.6.1cgymedB127
Cucsa.101790Silver-seed gourdcarcgyB0219
Cucsa.101790Silver-seed gourdcarcgyB0467
Cucsa.101790Cucumber (Chinese Long) v3cgycucB119
Cucsa.101790Watermelon (97103) v2cgywmbB134
Cucsa.101790Wax gourdcgywgoB147
Cucsa.101790Cucumber (Gy14) v1cgycgyB045
Cucsa.101790Cucurbita maxima (Rimu)cgycmaB0231
Cucsa.101790Cucurbita maxima (Rimu)cgycmaB0234
Cucsa.101790Cucurbita moschata (Rifu)cgycmoB0217
Cucsa.101790Cucurbita moschata (Rifu)cgycmoB0223
Cucsa.101790Cucurbita moschata (Rifu)cgycmoB0227
Cucsa.101790Cucurbita moschata (Rifu)cgycmoB0232
Cucsa.101790Wild cucumber (PI 183967)cgycpiB118
Cucsa.101790Cucumber (Chinese Long) v2cgycuB116
Cucsa.101790Melon (DHL92) v3.5.1cgymeB128
Cucsa.101790Watermelon (Charleston Gray)cgywcgB139
Cucsa.101790Watermelon (97103) v1cgywmB133
Cucsa.101790Cucurbita pepo (Zucchini)cgycpeB0211
Cucsa.101790Cucurbita pepo (Zucchini)cgycpeB0214
Cucsa.101790Cucurbita pepo (Zucchini)cgycpeB0226
Cucsa.101790Bottle gourd (USVL1VR-Ls)cgylsiB130