Cucsa.100140 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.100140
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	RRP15-like protein
Location	scaffold00926 : 729962 .. 733705 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCCTCCCCCGCCTGCCGCACTCCCTCCGCTCTTCCTCCTACCGGACGGCGCACTAACAGCTGCCGCAGCCTCAGCCTCAGCCTTCCGGCGAATTCGCTGTTGCCCCCCTCCATCTTACACTCTCGCCTCTTCCAGCAATCTGAGTTGCTTATATCTGTTTTTCATTCTTCTTAGAAGCACACTGGTTCAGCCCCTTGTCATCGCCGCCGTTGCTCATTTTTCAGGTCTCCAAGGTTTTTTTTTTCGCTTTATTTTGTTTTGTTGGGCTATGTTGGTTTATTCTCTTCACCGACGGAGAAGAAAAATCGATAGTGTTTTTTTTGGGGTTGTTGATTGCTTCTTCAACCAATGTTCAAGTAGTCTGAATGAAATTATAAAGTTAAGAATTTTTATTAGAGGGAAAAAAAGATTGAATCAAGAGGAATAAGGGAAAAAACTTATCATTCCTATCGGTGTTAGTAAATGAAATGATAAAATGTTTAAGAAGATGAACAAAGAAAAAGAGAAAATTCACTTAGTTTGTTTGGCTATAAAAAGACTTGTTGGAATAGAAAGCCTGTGTTTAAATATATTAAAGTTATTGTTATCAATTAAAAACAAAATCAACATTGGACAAATAAACTAGAAAGATAACATTGAGTTTGAGTCTGATCGAACGACATCGAATCTTCTTGAATATTGAAGAAACTATGAATGCCTACGAACTGGCATATGGTGGTTTTTGTTAGACAGGCGTAAATTAAATTTATACATATATAAGAAATCTTATGAGGTGTTCATATATATTATGGGGTAGAATTGTAAACAGGTGTGTGTATATTAGTTTCAACTGATGTCATTTTTCAAACAATTGGTTTCATTTTTTTGGGACATCCGAAAACACTGATTTGTAATCCTTCCAAATTCAGGGGTTTCAAACAGGGGTTAAGATCTTTTGGAATATTTGTTTCGGATAAGCTTTGCATTAGAATCAGGTACTATGACTGACGTCGGGAATGCGGTAGAATTGGTTAGAGGTGCAAAGAGGAGGAAAAAGATGGGTTCCAGGAACAATAAAAGGCCGAGGATGATGGGTGGAAGTGGAAACAAAGTTAAGATTGATAAGAAGATGAAGAAACTCTTCCAAAAACGGGCGCGGGAGTATAATTCAGACGATGACGATGATGATGGTGAGAAGGCTCCAAGAGTTAAAAAGGAGAGCAAAATTTTGGTGCGCAGTCATGAGGAGGAGGTTGGAGATGAAGAGTTTTCTGAGGGTGAAGAGGAAAGGAAGGATGTGAATGCAGATGTCGAGCTGTCTGAAGATGATGAAAATGGTGAAATTCAACCTGGTATAACAAAGTTTACAGAAGGTTGTAGAGCATTCCGAGCTGCATTCATGAGTATTCTCAAGAAGAACATATCTGATGAAACTCTGGTAGTTTATCTTAAATATGTCCAAATTGTTTTTAACAGTTGAAGTAATGAAGACATGATTGTGCCATATTTGTGATACAGGGTCCGATATTATCAGCAAACAAGAAGCTTGTTGCTGAAAAGCTTGCAGAAGAGGAAGCTGAGCGGAAGGTTAAAGGAGAGGCCAGGAAAGCAAAACAACTGGTATTTCCTTTTAAATCAAATATCTTGTTTGTTCTATGATTGAGCTTTTTCTTGAAATTGGTCGAATGTAAATGTTCAAATATTGCAGGTAGGAGAAAAAGGTCATGTGAAACCGGCTACATACCTGGATTCTCACGAAAAATTTCTTATTGGTGTTGCTACAAAAGGAGGTAGCATAGTTCTATTTTACTTTGAGATGGGCGTGGTTATCTTTTTTATTTTGACTTTGTTTATTATGTCTCTCATCATTCTAACACATTTATCTCCATGTGTATTGTTGCTTGCTGAATGTTAGTCGTCAAGTTGTTTAATGCTGTAAGTAGCCAAGTTTTGATTTCAGACAACTTTTTTGCTGCATCCTCCTTAACTATGTTGTGTTCATCGCTGAATTCCATTATTTTCAATATGACAGGTGAACAAGGCACAACATGCTCAGAAAGGGTTGAATCCTTCGAGAACTAAAGATGCTAAAGGTATTATGATCTCAGAAGTTTACAAAATCTCAGATTGTGTATGAGTATGAGTAATATAATCTTCAGTTTCTTTTCTCTTGCCGCATGAATATGTTGTCCCTAAATTTTCATTCAGTTGATGTCTTTGTCGTTGCATGCTGCATCATATTAAATCTTGTAGTTTAATTTTTCTAGTCATATGATGTATGTCTTTTATTTCTTTTCGTGGTTTCTGCTTTGTACTTGTTGAAAATTATGTTCGTATAGTCTGACCACGTATTGAACTTCTAATAAATGAGTCATGGTCAACTTGACTAATATATTGCCTTTGATAGGAAATATGTCTGTGATTGGAGTAATCAGTGATTTGAAGTTAGCCCCTCAAATTGATCGACATATTAGTTTCTCATTCTTACTCCCAGTCAATTAATGCCTTACCCTGTTTGCTTATATAGTAATAGTATTATGTAATGTTCAGCGTAACCTTGTTAGACCCATTTTGTTTGTGTATCAAGATACTTATCCTTTATTTCCTGAATTGTGAATCTGAGTTGCCATTCAAGATTGAGGGTGAAACCATGTCTTGAGTGGTTTTTCATTCTATCATGTCTCATTCTGAGCAAATTATTTGGTTTATATTGCCAGCTATAAATAAACGCAGAAAAGAAGCTTTCTTTTCTGAGTTGGGCAAGCCAACTTTGTCTGCAACAAACAGTAATGCGAAGGTCAGTTATTTTTCTACTTTTTAGTTCTCAACTAACTGCTGGTAAATTCTATTTTTAATCTCTTACAAGCGATTTTAGTTTTTACAAACACCTAAGCTCGGTGCCCAGAGGCAAAGCTTATGCATGTCCATCATCCTTATTGTATGTGGGTAGCGGAATTGGAAGGGTAGGGATGCCCATGGTTGGGGCAAGAACAGGGATAACTTTCATGTCTCCACAAAATTTCTGTTAAATTTATGCAGATCGGGATAGGGATAGGGATCTCCTACGAGGCATTCTAATTTAATAATACATAATTAAAAAAGGTAAATGGGATGGGGAGCGGGGACCAAGCCCTATGGGGAAAATTGACATAGAAAGGGGTGTTGATTAAGGGAGTGAAACTCAGGTCACCATCATACACTATCTGAGTATCTGTTCTTTCATGTCCATAATGCAACAAACTCAAATAGCCATCTCTGTGTTGAACAGTTAAACACATCAGGTGGTGCAGCGGACACTGAAGGCCCTGCCTGGGCTCCGTTACGCGACAATTATATGCTGACCAATTCCAAATTAAAAGACTGGGATAAGATGCCAGTAAGATACGATATATTTTCAAAGCCTACTGTAGGTTGGATCTCTGTTTTTATCAGTTACGATATTCATATCATTTGGATTGATTATACGTGCAGGATAATATGATGACAGCGGCAGAGGACAATGGGAGGGTGTTGGAAGACAGTAGTTCAGATGAAGATGATTGACTAGTCTAACACTACAAGTGAATTGCCTAGTTTGTAGTAGCTTTCAAGTTGCCTATAGTATACTTAAAAAGCTAAGCTCGATTTTGGCTTGTTAGCAAATTCAGCACATGTATGTCTCAGCTATATGTTATCCAGCAAAAAGAAAGAATTTCCCCCCTATTTTATTATCCAATTTTTTAGTCTGTGCCATCTGGTGAGATTAAATTGTATAAATGCCGCC

mRNA sequence

AACCCTCCCCCGCCTGCCGCACTCCCTCCGCTCTTCCTCCTACCGGACGGCGCACTAACAGCTGCCGCAGCCTCAGCCTCAGCCTTCCGGCGAATTCGCTGTTGCCCCCCTCCATCTTACACTCTCGCCTCTTCCAGCAATCTGAGTTGCTTATATCTGTTTTTCATTCTTCTTAGAAGCACACTGGTTCAGCCCCTTGTCATCGCCGCCGTTGCTCATTTTTCAGGGGTTTCAAACAGGGGTTAAGATCTTTTGGAATATTTGTTTCGGATAAGCTTTGCATTAGAATCAGGTACTATGACTGACGTCGGGAATGCGGTAGAATTGGTTAGAGGTGCAAAGAGGAGGAAAAAGATGGGTTCCAGGAACAATAAAAGGCCGAGGATGATGGGTGGAAGTGGAAACAAAGTTAAGATTGATAAGAAGATGAAGAAACTCTTCCAAAAACGGGCGCGGGAGTATAATTCAGACGATGACGATGATGATGGTGAGAAGGCTCCAAGAGTTAAAAAGGAGAGCAAAATTTTGGTGCGCAGTCATGAGGAGGAGGTTGGAGATGAAGAGTTTTCTGAGGGTGAAGAGGAAAGGAAGGATGTGAATGCAGATGTCGAGCTGTCTGAAGATGATGAAAATGGTGAAATTCAACCTGGTATAACAAAGTTTACAGAAGGTTGTAGAGCATTCCGAGCTGCATTCATGAGTATTCTCAAGAAGAACATATCTGATGAAACTCTGGGTCCGATATTATCAGCAAACAAGAAGCTTGTTGCTGAAAAGCTTGCAGAAGAGGAAGCTGAGCGGAAGGTTAAAGGAGAGGCCAGGAAAGCAAAACAACTGGTAGGAGAAAAAGGTCATGTGAAACCGGCTACATACCTGGATTCTCACGAAAAATTTCTTATTGGTGTTGCTACAAAAGGAGTCGTCAAGTTGTTTAATGCTGTGAACAAGGCACAACATGCTCAGAAAGGGTTGAATCCTTCGAGAACTAAAGATGCTAAAGCTATAAATAAACGCAGAAAAGAAGCTTTCTTTTCTGAGTTGGGCAAGCCAACTTTGTCTGCAACAAACAGTAATGCGAAGTTAAACACATCAGGTGGTGCAGCGGACACTGAAGGCCCTGCCTGGGCTCCGTTACGCGACAATTATATGCTGACCAATTCCAAATTAAAAGACTGGGATAAGATGCCAGATAATATGATGACAGCGGCAGAGGACAATGGGAGGGTGTTGGAAGACAGTAGTTCAGATGAAGATGATTGACTAGTCTAACACTACAAGTGAATTGCCTAGTTTGTAGTAGCTTTCAAGTTGCCTATAGTATACTTAAAAAGCTAAGCTCGATTTTGGCTTGTTAGCAAATTCAGCACATGTATGTCTCAGCTATATGTTATCCAGCAAAAAGAAAGAATTTCCCCCCTATTTTATTATCCAATTTTTTAGTCTGTGCCATCTGGTGAGATTAAATTGTATAAATGCCGCC

Coding sequence (CDS)

ATGACTGACGTCGGGAATGCGGTAGAATTGGTTAGAGGTGCAAAGAGGAGGAAAAAGATGGGTTCCAGGAACAATAAAAGGCCGAGGATGATGGGTGGAAGTGGAAACAAAGTTAAGATTGATAAGAAGATGAAGAAACTCTTCCAAAAACGGGCGCGGGAGTATAATTCAGACGATGACGATGATGATGGTGAGAAGGCTCCAAGAGTTAAAAAGGAGAGCAAAATTTTGGTGCGCAGTCATGAGGAGGAGGTTGGAGATGAAGAGTTTTCTGAGGGTGAAGAGGAAAGGAAGGATGTGAATGCAGATGTCGAGCTGTCTGAAGATGATGAAAATGGTGAAATTCAACCTGGTATAACAAAGTTTACAGAAGGTTGTAGAGCATTCCGAGCTGCATTCATGAGTATTCTCAAGAAGAACATATCTGATGAAACTCTGGGTCCGATATTATCAGCAAACAAGAAGCTTGTTGCTGAAAAGCTTGCAGAAGAGGAAGCTGAGCGGAAGGTTAAAGGAGAGGCCAGGAAAGCAAAACAACTGGTAGGAGAAAAAGGTCATGTGAAACCGGCTACATACCTGGATTCTCACGAAAAATTTCTTATTGGTGTTGCTACAAAAGGAGTCGTCAAGTTGTTTAATGCTGTGAACAAGGCACAACATGCTCAGAAAGGGTTGAATCCTTCGAGAACTAAAGATGCTAAAGCTATAAATAAACGCAGAAAAGAAGCTTTCTTTTCTGAGTTGGGCAAGCCAACTTTGTCTGCAACAAACAGTAATGCGAAGTTAAACACATCAGGTGGTGCAGCGGACACTGAAGGCCCTGCCTGGGCTCCGTTACGCGACAATTATATGCTGACCAATTCCAAATTAAAAGACTGGGATAAGATGCCAGATAATATGATGACAGCGGCAGAGGACAATGGGAGGGTGTTGGAAGACAGTAGTTCAGATGAAGATGATTGA

Protein sequence

MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDDDDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGITKFTEGCRAFRAAFMSILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKRRKEAFFSELGKPTLSATNSNAKLNTSGGAADTEGPAWAPLRDNYMLTNSKLKDWDKMPDNMMTAAEDNGRVLEDSSSDEDD*

Homology

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BLAST of Cucsa.100140 vs. Swiss-Prot
Match: RRP15_BOVIN (RRP15-like protein OS=Bos taurus GN=RRP15 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 6.3e-14
Identity = 86/277 (31.05%), Postives = 125/277 (45.13%), Query Frame = 1


Query: 34  SGNKVKIDKKMKKLFQKRAREYNSDDDDDDGEKAPRVKKESKILVRSHEEEVGDEEFSEG 93
           +G K+KI  + K++    A   +  +D D           S  L + H        FS G
Sbjct: 12  AGKKLKISLRKKRMKMVVASVASELEDKDKDASDNEGSLGSCGLEKDH--------FSSG 71

Query: 94  EEERKDVNADVELSEDDENGEIQPGITKFTEGCRAFRAAFMS-ILKKNISDETLGPILSA 153
           +E  +  N D     +D+N        + T G  A  A  M+ IL K I  E+   IL  
Sbjct: 72  DEAVEADNEDEAEPREDDNDSA----AEATAGANAGWADAMARILSKKIP-ESKPTILVR 131

Query: 154 NKKLVAEK--LAEEEAERKVKGEARKAKQLVGEKGHVKPATYLDSH-EKFLIGVATKGVV 213
           NK+L  EK  L +E  E++ + + ++  +++     VKP    D   E+ L  +AT+GVV
Sbjct: 132 NKELEKEKEKLKQERLEKRKQLDKKREWEMMCR---VKPDVVKDKETERNLQRIATRGVV 191

Query: 214 KLFNAVNKAQ----HAQKGLNPSRTKDAKAINKRRKEAFFSELGKPTLSATNSNAKLNTS 273
           +LFNAV K Q       K    S  K AK I+   K+ F S L     SA+  N+    S
Sbjct: 192 QLFNAVQKHQKNVDEKVKEAGGSIRKRAKLISSVSKKDFISVLRGMDGSASEKNSAGKNS 251

Query: 274 GG----AADTEGPAWAPLRDNYMLTNSKLKDWDKMPD 299
                 A   EGP W  LRD++M+  + +KDWDK  D
Sbjct: 252 KAKQTEAKSEEGPGWTILRDDFMM-GASMKDWDKESD 271

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BLAST of Cucsa.100140 vs. Swiss-Prot
Match: RRP15_RAT (RRP15-like protein OS=Rattus norvegicus GN=Rrp15 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 5.4e-13
Identity = 70/247 (28.34%), Postives = 120/247 (48.58%), Query Frame = 1


Query: 65  EKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPG------ 124
           +K  ++KK +K  V   E+E+ D    EG  E +  ++D   +E D    ++        
Sbjct: 21  KKKKKMKKVAKAAVSKLEDELKDSSGGEGSCESEMDDSDDGAAEADSEDNVESCEEENEV 80

Query: 125 ITKFTEGCRAFRAAFMSILKKNISDETLGPILSANKKLVAEK--LAEEEAERKVKGEARK 184
             + + G  +  A  M+ +    + ++   IL+ NK+L  EK  L +E  E++ + + ++
Sbjct: 81  AAESSAGTNSGWADAMAKILNKKTPKSKPTILTKNKELEKEKEKLKQERLEKRKQIDKKR 140

Query: 185 AKQLVGEKGHVKPATYLDSH-EKFLIGVATKGVVKLFNAVNKAQ----HAQKGLNPSRTK 244
             +++     VKP    D   E+ L  +AT+GVV+LFNAV K Q       K +  S  K
Sbjct: 141 EWEMLCR---VKPDVIKDKEAERNLQRIATRGVVQLFNAVQKHQRNVDEKVKEVGGSIRK 200

Query: 245 DAKAINKRRKEAFFSELGKPTLSATNSNAKLNTSGGAADT---EGPAWAPLRDNYMLTNS 296
            AK ++   K+ F S L     ++ NS+A  +      +    EGP W  LRD++M+  +
Sbjct: 201 RAKLMSTVSKKDFISVLRGMDGASENSSAGKSPKARQTEVKSEEGPGWKILRDDFMM-GA 260

[Close]

BLAST of Cucsa.100140 vs. Swiss-Prot
Match: RRP15_HUMAN (RRP15-like protein OS=Homo sapiens GN=RRP15 PE=1 SV=2)

HSP 1 Score: 75.5 bits (184), Expect = 1.2e-12
Identity = 84/282 (29.79%), Postives = 128/282 (45.39%), Query Frame = 1


Query: 60  DDDDGEKAPRVKKE--SKILVRSHEEEVGDEEFSEGE--EERKDVNADVELSEDDENGEI 119
           ++++ +K P+ K +  +  +    E+E  D   SEG    E+    +D +  E D  G+ 
Sbjct: 12  EEENLKKTPKKKMKMVTGAVASVLEDEATDTSDSEGSCGSEKDHFYSDDDAIEADSEGDA 71

Query: 120 QP------GITKFTEGCRAFRAAFMSILKKNISDETLGPILSANKKLVAEK--LAEEEAE 179
           +P         + + G     A  M+ +    + E+   IL  NKKL  EK  L +E  E
Sbjct: 72  EPCDKENENDGESSVGTNMGWADAMAKVLNKKTPESKPTILVKNKKLEKEKEKLKQERLE 131

Query: 180 RKVKGEARKAKQLVGEKGHVKPATYLDSH-EKFLIGVATKGVVKLFNAVNKAQ----HAQ 239
           +  + + R   +++     VKP    D   E+ L  +AT+GVV+LFNAV K Q       
Sbjct: 132 KIKQRDKRLEWEMMCR---VKPDVVQDKETERNLQRIATRGVVQLFNAVQKHQKNVDEKV 191

Query: 240 KGLNPSRTKDAKAINKRRKEAFFSELGKPTLSATNSNAKLNTSGGAADT-----EGPAWA 299
           K    S  K AK I+   K+ F S L +    +TN  A       A  T     EGP W 
Sbjct: 192 KEAGSSMRKRAKLISTVSKKDFISVL-RGMDGSTNETASSRKKPKAKQTEVKSEEGPGWT 251

Query: 300 PLRDNYMLTNSKLKDWDKMPDNMMTAAEDNGRVLEDSSSDED 320
            LRD++M+  + +KDWDK  D       D+ R   +S+SD D
Sbjct: 252 ILRDDFMM-GASMKDWDKESD-----GPDDSR--PESASDSD 281

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BLAST of Cucsa.100140 vs. Swiss-Prot
Match: RRP15_MOUSE (RRP15-like protein OS=Mus musculus GN=Rrp15 PE=1 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 5.9e-12
Identity = 70/253 (27.67%), Postives = 122/253 (48.22%), Query Frame = 1


Query: 65  EKAPRVKKESKILVRSH----EEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQP--- 124
           +++P+ KK+ K++ ++     E+EV D    EG  + +  ++D   +E D    ++    
Sbjct: 17  KRSPKKKKKMKMVAKAAASKLEDEVKDSSDGEGSCDSEMDHSDDGAAEADSEDNVESCEE 76

Query: 125 ---GITKFTEGCRAFRAAFMSILKKNISDETLGPILSANKKLVAEK--LAEEEAERKVKG 184
                 + + G  +  A  M+ +    + ++   IL+ NK+L  EK  L +E  E++ + 
Sbjct: 77  DNEDAAESSAGTNSGWADAMAKILNKKTPKSKATILTKNKELEKEKEKLKQERLEKRKQL 136

Query: 185 EARKAKQLVGEKGHVKPATYLDSH-EKFLIGVATKGVVKLFNAVNKAQ----HAQKGLNP 244
           + ++  +++     VKP    D   E+ L  +AT+GVV+LFNAV K Q       K    
Sbjct: 137 DKKREWEMLCR---VKPDVVKDKEAERNLQRIATRGVVQLFNAVQKHQRNVGEKVKEAGG 196

Query: 245 SRTKDAKAINKRRKEAFFSELGKPTLSATNSNAKLNTSGGAADT-----EGPAWAPLRDN 296
           S  K AK ++   K+ F S L    +  T+ N+    S  A  T     E P W  LRD+
Sbjct: 197 SVRKRAKLMSTVSKKDFISVL--RGMDGTSRNSPAGKSPKARQTEVKSEESPGWKILRDD 256

[Close]

BLAST of Cucsa.100140 vs. Swiss-Prot
Match: RRP15_DANRE (RRP15-like protein OS=Danio rerio GN=rrp15 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.5e-10
Identity = 66/244 (27.05%), Postives = 109/244 (44.67%), Query Frame = 1


Query: 80  SHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGITKFTEGCRAFRAAFMSILKK 139
           S++EE G +   EG +     + D +   D+E  E  P           +  A   +L K
Sbjct: 25  SNDEESGADSDHEGADAEN--SGDEDGKSDEEQNEENPNA--------GWAEAMAKVLGK 84

Query: 140 NISDETLGPILSANKKL--VAEKLAEEEAERKVKGEARKAKQLVGEKGHVKPATYLD-SH 199
              D T   IL  NK+L  + EK  +E  E+K + + ++A + +  +   KP    D  H
Sbjct: 85  KTPD-TKPSILLKNKQLDKIKEKEKKERLEKKKQLDKKRAWENICRE---KPDVVQDREH 144

Query: 200 EKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKRRKEAFFSELGKPTLSAT 259
           E+ L  VAT+GVV+LFNA+   ++ QK +N  R K+     +++ +   S   K  +   
Sbjct: 145 ERNLQRVATRGVVQLFNAL---KNHQKNVN-ERIKEVGGSERKKSKILSSVSKKDFIDVL 204

Query: 260 NSNAKLNTSGGAADTEGPAWAPLRDNYMLTNSKLKDWDKMPDNMMTAAEDNGRVLEDSSS 319
                          E  +W+ L+D++M+  + +KDWDK  D      E++ R      S
Sbjct: 205 RGTDVAVKKEKEIKAEKSSWSVLKDDFMM-GASMKDWDKERDEDGGGGEEDEREPAQEYS 249

Query: 320 DEDD 321
            E D
Sbjct: 265 SESD 249

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BLAST of Cucsa.100140 vs. TrEMBL
Match: A0A0A0K320_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G031550 PE=4 SV=1)

HSP 1 Score: 634.4 bits (1635), Expect = 7.4e-179
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 1


Query: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60
           MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD
Sbjct: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60

Query: 61  DDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGIT 120
           DDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGIT
Sbjct: 61  DDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGIT 120

Query: 121 KFTEGCRAFRAAFMSILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQL 180
           KFTEGCRAFRAAFMSILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQL
Sbjct: 121 KFTEGCRAFRAAFMSILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQL 180

Query: 181 VGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKRR 240
           VGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKRR
Sbjct: 181 VGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKRR 240

Query: 241 KEAFFSELGKPTLSATNSNAKLNTSGGAADTEGPAWAPLRDNYMLTNSKLKDWDKMPDNM 300
           KEAFFSELGKPTLSATNSNAKLNTSGGAADTEGPAWAPLRDNYMLTNSKLKDWDKMPDNM
Sbjct: 241 KEAFFSELGKPTLSATNSNAKLNTSGGAADTEGPAWAPLRDNYMLTNSKLKDWDKMPDNM 300

Query: 301 MTAAEDNGRVLEDSSSDEDD 321
           MTAAEDNGRVLEDSSSDEDD
Sbjct: 301 MTAAEDNGRVLEDSSSDEDD 320

[Close]

BLAST of Cucsa.100140 vs. TrEMBL
Match: A0A067E7D6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0207781mg PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 1.5e-102
Identity = 192/309 (62.14%), Postives = 235/309 (76.05%), Query Frame = 1


Query: 12  RGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDDDDDGEKAPRVK 71
           R  K  KK G +  K+ ++M GSG +VKI+ KM+KLF+KRAR YNSDDD+D  E AP  +
Sbjct: 15  RKRKSSKKKGGKGKKKLKVMPGSGERVKINNKMRKLFRKRARAYNSDDDED--ESAPEFR 74

Query: 72  KESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGITKFTEGCRAFRA 131
            +S + V++ E E      +E E+       + E S+D+ENGEIQPGI  F EG RAF+ 
Sbjct: 75  GDSSLSVKNQEVEGRGSSDTEREDGMDLDVENEEFSDDEENGEIQPGIANFAEGSRAFKM 134

Query: 132 AFMSILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQLVGEKGHVKPAT 191
           AF SIL+K+++D+ LGP+LSA+KKLV EKLAEEEAERKVKGEA+K + L  EKGHVKPA 
Sbjct: 135 AFKSILRKSVADDALGPVLSAHKKLVGEKLAEEEAERKVKGEAKKERHLAAEKGHVKPAN 194

Query: 192 YLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKRRKEAFFSELGKP 251
           YLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSR+KD K + KRRKE FFSELGK 
Sbjct: 195 YLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDEKLLKKRRKETFFSELGKT 254

Query: 252 TLSATNSNAKLNTSGGAADTEGPAWAPLRDNYMLTNSKLKDWDKMPDNMMTAAEDNGRVL 311
           ++S  +++AK   S G AD EGPAWAPLRDNYMLT+SKLKDWDKMP +   AA++ GR+ 
Sbjct: 255 SVSTADASAKGPNSSGTADGEGPAWAPLRDNYMLTSSKLKDWDKMPQDSTVAADETGRLS 314

Query: 312 EDSSSDEDD 321
           E+  S +DD
Sbjct: 315 EEDGSSDDD 321

[Close]

BLAST of Cucsa.100140 vs. TrEMBL
Match: A0A067EAS1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0207781mg PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 4.3e-102
Identity = 193/309 (62.46%), Postives = 237/309 (76.70%), Query Frame = 1


Query: 12  RGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDDDDDGEKAPRVK 71
           R  K  KK G +  K+ ++M GSG +VKI+ KM+KLF+KRAR YNSDDD+D  E AP  +
Sbjct: 15  RKRKSSKKKGGKGKKKLKVMPGSGERVKINNKMRKLFRKRARAYNSDDDED--ESAPEFR 74

Query: 72  KESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGITKFTEGCRAFRA 131
            +S + V++ E E      +E E+       + E S+D+ENGEIQPGI  F EG RAF+ 
Sbjct: 75  GDSSLSVKNQEVEGRGSSDTEREDGMDLDVENEEFSDDEENGEIQPGIANFAEGSRAFKM 134

Query: 132 AFMSILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQLVGEKGHVKPAT 191
           AF SIL+K+++D+ LGP+LSA+KKLV EKLAEEEAERKVKGEA+K + L  EKGHVKPA 
Sbjct: 135 AFKSILRKSVADDALGPVLSAHKKLVGEKLAEEEAERKVKGEAKKERHLAAEKGHVKPAN 194

Query: 192 YLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKRRKEAFFSELGKP 251
           YLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSR+KD K + KRRKE FFSELGK 
Sbjct: 195 YLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDEKLLKKRRKETFFSELGKT 254

Query: 252 TLSATNSNAKLNTSGGAADTEGPAWAPLRDNYMLTNSKLKDWDKMPDNMMTAAEDNGRVL 311
           ++S  +++AK   S G AD EGPAWAPLRDNYMLT+SKLKDWDKMPD+ + AA++ GR+ 
Sbjct: 255 SVSTADASAKGPNSSGTADGEGPAWAPLRDNYMLTSSKLKDWDKMPDSTV-AADETGRLS 314

Query: 312 EDSSSDEDD 321
           E+  S +DD
Sbjct: 315 EEDGSSDDD 320

[Close]

BLAST of Cucsa.100140 vs. TrEMBL
Match: W9S4P7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006868 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 9.0e-100
Identity = 206/337 (61.13%), Postives = 240/337 (71.22%), Query Frame = 1


Query: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKI---------------DKKMK 60
           M +    +E   G K+RK  G R N  P+MM     K K+               D+ +K
Sbjct: 1   MVEEKGIMESTTGPKKRK-FGKRKN--PKMMKTKKKKKKVSHFPEGVGELKPKKSDRDIK 60

Query: 61  KLFQKRAREYNSDDDDDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEE--RKDVNA- 120
           KLF+KRAR+YNSD+++ + ++               EE  GD + SE  EE   ++VN  
Sbjct: 61  KLFRKRARDYNSDEEESEDKR---------------EENDGDGDSSEAAEELENQEVNKE 120

Query: 121 DVELSEDDENGEIQPGITKFTEGCRAFRAAFMSILKKNISDETLGPILSANKKLVAEKLA 180
           D E S+ DE GEIQPGITKFTEGCRAFR AF SI+KK ++D+ LGP+LSA+KKLVAEKLA
Sbjct: 121 DNEFSDVDEAGEIQPGITKFTEGCRAFRMAFKSIIKKAVNDDPLGPVLSAHKKLVAEKLA 180

Query: 181 EEEAERKVKGEARKAKQLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQ 240
           EEEAERKVKG+ +K K LVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQ
Sbjct: 181 EEEAERKVKGQTKKEKHLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQ 240

Query: 241 KGLNPSRTKDAKAINKRRKEAFFSELGKPTLSATNSNAKLNTSGGAADTEGPAWAPLRDN 300
           KGLNPS  KD KAI KRRKEAFF+ELGK   +A N+ AKL TS G AD EGPAWAPLRDN
Sbjct: 241 KGLNPSSFKDKKAIRKRRKEAFFTELGKTPSAAVNATAKLQTSSGQADDEGPAWAPLRDN 300

Query: 301 YMLTNSKLKDWDKMPDNMMTAAEDNGRVLEDSSSDED 320
           YMLT+SKLKDWDKMPD   T  ++ G V EDSSSD+D
Sbjct: 301 YMLTSSKLKDWDKMPDK--TVTDEIGNVSEDSSSDDD 317

[Close]

BLAST of Cucsa.100140 vs. TrEMBL
Match: V4UA95_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015959mg PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 4.5e-99
Identity = 190/309 (61.49%), Postives = 233/309 (75.40%), Query Frame = 1


Query: 12  RGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDDDDDGEKAPRVK 71
           R  K  KK G +  K+ ++M GSG +VKI+ KM+KLF+KRAR YNSDDD+   E AP  +
Sbjct: 15  RKRKSSKKKGGKGKKKLKVMPGSGERVKINNKMRKLFRKRARAYNSDDDE--AESAPEFR 74

Query: 72  KESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGITKFTEGCRAFRA 131
            +S + V++ E E      +E E+       + E S+D+ENGEIQPGI  F EG RAF+ 
Sbjct: 75  GDSSLSVKNQEVEGRGSSDTEREDGMDLDVENEEFSDDEENGEIQPGIANFAEGSRAFKM 134

Query: 132 AFMSILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQLVGEKGHVKPAT 191
           AF SIL+K+++D+ LGP+LSA+KKL  EKLAEEEAERKVKGEA+K + L  EKGHVKPA 
Sbjct: 135 AFKSILRKSVADDALGPVLSAHKKLFGEKLAEEEAERKVKGEAKKERHLAAEKGHVKPAN 194

Query: 192 YLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKRRKEAFFSELGKP 251
           YLDS EKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSR+KD K + KRRKE FFSELGK 
Sbjct: 195 YLDSCEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDEKLLKKRRKETFFSELGKT 254

Query: 252 TLSATNSNAKLNTSGGAADTEGPAWAPLRDNYMLTNSKLKDWDKMPDNMMTAAEDNGRVL 311
           ++S  ++ AK   S G AD EGPAWAPLRDNYMLT+SKLKDWDKMPD+ + AA++ GR+ 
Sbjct: 255 SVSTADACAKGPNSSGTADGEGPAWAPLRDNYMLTSSKLKDWDKMPDSTV-AADETGRLS 314

Query: 312 EDSSSDEDD 321
           E+  S +DD
Sbjct: 315 EEDGSSDDD 320

[Close]

BLAST of Cucsa.100140 vs. TAIR10
Match: AT5G48240.3 (AT5G48240.3 unknown protein)

HSP 1 Score: 265.4 bits (677), Expect = 4.6e-71
Identity = 150/295 (50.85%), Postives = 198/295 (67.12%), Query Frame = 1


Query: 12  RGAKRRK---KMGSR--NNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD---DDD 71
           RG+++R+   K G++   NK+ +    + ++ K+  K +KLFQKRAR+YNSDDD   DD+
Sbjct: 14  RGSRKRRVGVKKGTKAARNKKQKSKPSTSDRFKVTMKNQKLFQKRARDYNSDDDEEEDDE 73

Query: 72  GEKAPRVKKESKIL----VRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGI 131
            +K P V    KI     +  + EE+G+E+  E              S+ +++GEI+ GI
Sbjct: 74  SKKQPEVTIREKIFSDANMGPNYEEIGEEDNDEN-------------SDGEDHGEIESGI 133

Query: 132 TKF-TEGCRAFRAAFMSILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAK 191
           TKF T+GC AF+ AF +I+KK   D+TLGP+LSA+K L+ EKLAE+EAE+K KG+ARKAK
Sbjct: 134 TKFATDGCNAFKIAFKAIMKKTKGDDTLGPVLSAHKHLIGEKLAEDEAEKKAKGQARKAK 193

Query: 192 QLVGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINK 251
            L+ EKGHVKP +YLDSHEK LIGVATKGVVKLFNAVNKAQHAQKGLNPSR+KDAK + K
Sbjct: 194 HLIAEKGHVKPGSYLDSHEKILIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDAKVLKK 253

Query: 252 RRKEAFFSELGKPTLSATNSNAKLNTSGGAADTEGPAWAPLRD---NYMLTNSKL 291
           RRKEAF SELGK        +A+ N      D      AP+     N++++ SKL
Sbjct: 254 RRKEAFLSELGKTKTDTKPFDARRNKLVFCLDL-----APIESHEKNHLMSESKL 290

HSP 2 Score: 53.9 bits (128), Expect = 2.1e-07
Identity = 34/88 (38.64%), Postives = 40/88 (45.45%), Query Frame = 1


Query: 232 DAKAINKRRKEAFFSELGKPTLSATNSNAKLNTSGGAADTEGPAWAPLRDNYMLTNSKLK 291
           D   I    K    SE          S  K + S   ++ E P WAPLRDNYML N KLK
Sbjct: 272 DLAPIESHEKNHLMSESKLVFCLELASIEKGSPSAHKSEDEAPVWAPLRDNYMLANPKLK 331

Query: 292 DWDKMPDNMMTAAEDNGRVLEDSSSDED 320
           DWDK  +   T+  D+   L    S ED
Sbjct: 332 DWDKKQE---TSEGDDFAGLSGDESYED 356

[Close]

BLAST of Cucsa.100140 vs. NCBI nr
Match: gi|449453624|ref|XP_004144556.1| (PREDICTED: RRP15-like protein [Cucumis sativus])

HSP 1 Score: 634.4 bits (1635), Expect = 1.1e-178
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 1


Query: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60
           MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD
Sbjct: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60

Query: 61  DDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGIT 120
           DDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGIT
Sbjct: 61  DDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGIT 120

Query: 121 KFTEGCRAFRAAFMSILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQL 180
           KFTEGCRAFRAAFMSILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQL
Sbjct: 121 KFTEGCRAFRAAFMSILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQL 180

Query: 181 VGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKRR 240
           VGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKRR
Sbjct: 181 VGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKRR 240

Query: 241 KEAFFSELGKPTLSATNSNAKLNTSGGAADTEGPAWAPLRDNYMLTNSKLKDWDKMPDNM 300
           KEAFFSELGKPTLSATNSNAKLNTSGGAADTEGPAWAPLRDNYMLTNSKLKDWDKMPDNM
Sbjct: 241 KEAFFSELGKPTLSATNSNAKLNTSGGAADTEGPAWAPLRDNYMLTNSKLKDWDKMPDNM 300

Query: 301 MTAAEDNGRVLEDSSSDEDD 321
           MTAAEDNGRVLEDSSSDEDD
Sbjct: 301 MTAAEDNGRVLEDSSSDEDD 320

[Close]

BLAST of Cucsa.100140 vs. NCBI nr
Match: gi|659124195|ref|XP_008462030.1| (PREDICTED: RRP15-like protein [Cucumis melo])

HSP 1 Score: 615.9 bits (1587), Expect = 3.9e-173
Identity = 309/320 (96.56%), Postives = 313/320 (97.81%), Query Frame = 1


Query: 1   MTDVGNAVELVRGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDD 60
           MTDVGNA+ELVRGAKRRKKMGSRN KRPRMMGGSGNK K+DKKMKKLFQKRAREYNSDDD
Sbjct: 1   MTDVGNAIELVRGAKRRKKMGSRNKKRPRMMGGSGNKAKVDKKMKKLFQKRAREYNSDDD 60

Query: 61  DDDGEKAPRVKKESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGIT 120
           D+DGEKAP VK ESKILV SHEEEVGDEE SEGEEERKDVNADVELSEDDENGEIQPGIT
Sbjct: 61  DNDGEKAPTVKNESKILVHSHEEEVGDEELSEGEEERKDVNADVELSEDDENGEIQPGIT 120

Query: 121 KFTEGCRAFRAAFMSILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQL 180
           KFTEGCRAFRAAF+SILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQL
Sbjct: 121 KFTEGCRAFRAAFISILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQL 180

Query: 181 VGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKRR 240
           VGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKRR
Sbjct: 181 VGEKGHVKPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKRR 240

Query: 241 KEAFFSELGKPTLSATNSNAKLNTSGGAADTEGPAWAPLRDNYMLTNSKLKDWDKMPDNM 300
           KEAFFSELGKPTLSATNSNAKLNTSGGAAD EGPAWAPLRDNYMLTNSKLKDWDKMPDNM
Sbjct: 241 KEAFFSELGKPTLSATNSNAKLNTSGGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDNM 300

Query: 301 MTAAEDNGRVLEDSSSDEDD 321
           MTAAEDNGRVLEDSSSDEDD
Sbjct: 301 MTAAEDNGRVLEDSSSDEDD 320

[Close]

BLAST of Cucsa.100140 vs. NCBI nr
Match: gi|641831953|gb|KDO50998.1| (hypothetical protein CISIN_1g0207781mg [Citrus sinensis])

HSP 1 Score: 380.9 bits (977), Expect = 2.1e-102
Identity = 192/309 (62.14%), Postives = 235/309 (76.05%), Query Frame = 1


Query: 12  RGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDDDDDGEKAPRVK 71
           R  K  KK G +  K+ ++M GSG +VKI+ KM+KLF+KRAR YNSDDD+D  E AP  +
Sbjct: 15  RKRKSSKKKGGKGKKKLKVMPGSGERVKINNKMRKLFRKRARAYNSDDDED--ESAPEFR 74

Query: 72  KESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGITKFTEGCRAFRA 131
            +S + V++ E E      +E E+       + E S+D+ENGEIQPGI  F EG RAF+ 
Sbjct: 75  GDSSLSVKNQEVEGRGSSDTEREDGMDLDVENEEFSDDEENGEIQPGIANFAEGSRAFKM 134

Query: 132 AFMSILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQLVGEKGHVKPAT 191
           AF SIL+K+++D+ LGP+LSA+KKLV EKLAEEEAERKVKGEA+K + L  EKGHVKPA 
Sbjct: 135 AFKSILRKSVADDALGPVLSAHKKLVGEKLAEEEAERKVKGEAKKERHLAAEKGHVKPAN 194

Query: 192 YLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKRRKEAFFSELGKP 251
           YLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSR+KD K + KRRKE FFSELGK 
Sbjct: 195 YLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDEKLLKKRRKETFFSELGKT 254

Query: 252 TLSATNSNAKLNTSGGAADTEGPAWAPLRDNYMLTNSKLKDWDKMPDNMMTAAEDNGRVL 311
           ++S  +++AK   S G AD EGPAWAPLRDNYMLT+SKLKDWDKMP +   AA++ GR+ 
Sbjct: 255 SVSTADASAKGPNSSGTADGEGPAWAPLRDNYMLTSSKLKDWDKMPQDSTVAADETGRLS 314

Query: 312 EDSSSDEDD 321
           E+  S +DD
Sbjct: 315 EEDGSSDDD 321

[Close]

BLAST of Cucsa.100140 vs. NCBI nr
Match: gi|641831954|gb|KDO50999.1| (hypothetical protein CISIN_1g0207781mg [Citrus sinensis])

HSP 1 Score: 379.4 bits (973), Expect = 6.2e-102
Identity = 193/309 (62.46%), Postives = 237/309 (76.70%), Query Frame = 1


Query: 12  RGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDDDDDGEKAPRVK 71
           R  K  KK G +  K+ ++M GSG +VKI+ KM+KLF+KRAR YNSDDD+D  E AP  +
Sbjct: 15  RKRKSSKKKGGKGKKKLKVMPGSGERVKINNKMRKLFRKRARAYNSDDDED--ESAPEFR 74

Query: 72  KESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGITKFTEGCRAFRA 131
            +S + V++ E E      +E E+       + E S+D+ENGEIQPGI  F EG RAF+ 
Sbjct: 75  GDSSLSVKNQEVEGRGSSDTEREDGMDLDVENEEFSDDEENGEIQPGIANFAEGSRAFKM 134

Query: 132 AFMSILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQLVGEKGHVKPAT 191
           AF SIL+K+++D+ LGP+LSA+KKLV EKLAEEEAERKVKGEA+K + L  EKGHVKPA 
Sbjct: 135 AFKSILRKSVADDALGPVLSAHKKLVGEKLAEEEAERKVKGEAKKERHLAAEKGHVKPAN 194

Query: 192 YLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKRRKEAFFSELGKP 251
           YLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSR+KD K + KRRKE FFSELGK 
Sbjct: 195 YLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDEKLLKKRRKETFFSELGKT 254

Query: 252 TLSATNSNAKLNTSGGAADTEGPAWAPLRDNYMLTNSKLKDWDKMPDNMMTAAEDNGRVL 311
           ++S  +++AK   S G AD EGPAWAPLRDNYMLT+SKLKDWDKMPD+ + AA++ GR+ 
Sbjct: 255 SVSTADASAKGPNSSGTADGEGPAWAPLRDNYMLTSSKLKDWDKMPDSTV-AADETGRLS 314

Query: 312 EDSSSDEDD 321
           E+  S +DD
Sbjct: 315 EEDGSSDDD 320

[Close]

BLAST of Cucsa.100140 vs. NCBI nr
Match: gi|568830248|ref|XP_006469413.1| (PREDICTED: RRP15-like protein isoform X1 [Citrus sinensis])

HSP 1 Score: 376.7 bits (966), Expect = 4.0e-101
Identity = 191/309 (61.81%), Postives = 234/309 (75.73%), Query Frame = 1


Query: 12  RGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDDDDDGEKAPRVK 71
           R  K  KK G +  K+ ++M GSG +VKI+ KM+KLF+KRAR YNSDDD+D  E AP  +
Sbjct: 15  RKRKSSKKKGGKGKKKLKVMPGSGERVKINNKMRKLFRKRARAYNSDDDED--ESAPEFR 74

Query: 72  KESKILVRSHEEEVGDEEFSEGEEERKDVNADVELSEDDENGEIQPGITKFTEGCRAFRA 131
            +S + V++ E E      +E E+       + E S+D+ENGEIQPGI  F EG RAF+ 
Sbjct: 75  GDSSLSVKNQEVEGRGSSDTEREDGMDLDVENEEFSDDEENGEIQPGIANFAEGSRAFKM 134

Query: 132 AFMSILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQLVGEKGHVKPAT 191
           AF SIL+K+++D+ LGP+LSA+KKLV EKLAEEEAERKVKGEA+K + L  EKGHVKPA 
Sbjct: 135 AFKSILRKSVADDALGPVLSAHKKLVGEKLAEEEAERKVKGEAKKERHLAAEKGHVKPAN 194

Query: 192 YLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKRRKEAFFSELGKP 251
           YLDS EKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSR+KD K + KRRKE FFSELGK 
Sbjct: 195 YLDSCEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDEKLLKKRRKETFFSELGKT 254

Query: 252 TLSATNSNAKLNTSGGAADTEGPAWAPLRDNYMLTNSKLKDWDKMPDNMMTAAEDNGRVL 311
           ++S  +++AK   S G AD EGPAWAPLRDNYMLT+SKLKDWDKMP +   AA++ GR+ 
Sbjct: 255 SVSTADASAKGPNSSGTADGEGPAWAPLRDNYMLTSSKLKDWDKMPQDSTVAADETGRLS 314

Query: 312 EDSSSDEDD 321
           E+  S +DD
Sbjct: 315 EEDGSSDDD 321

The following BLAST results are available for this feature:

BLAST of Cucsa.100140 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RRP15_BOVIN	6.3e-14	31.05	RRP15-like protein OS=Bos taurus GN=RRP15 PE=2 SV=1	[more]
RRP15_RAT	5.4e-13	28.34	RRP15-like protein OS=Rattus norvegicus GN=Rrp15 PE=1 SV=1	[more]
RRP15_HUMAN	1.2e-12	29.79	RRP15-like protein OS=Homo sapiens GN=RRP15 PE=1 SV=2	[more]
RRP15_MOUSE	5.9e-12	27.67	RRP15-like protein OS=Mus musculus GN=Rrp15 PE=1 SV=2	[more]
RRP15_DANRE	1.5e-10	27.05	RRP15-like protein OS=Danio rerio GN=rrp15 PE=2 SV=1	[more]

BLAST of Cucsa.100140 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K320_CUCSA	7.4e-179	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G031550 PE=4 SV=1	[more]
A0A067E7D6_CITSI	1.5e-102	62.14	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0207781mg PE=4 SV=1	[more]
A0A067EAS1_CITSI	4.3e-102	62.46	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0207781mg PE=4 SV=1	[more]
W9S4P7_9ROSA	9.0e-100	61.13	Uncharacterized protein OS=Morus notabilis GN=L484_006868 PE=4 SV=1	[more]
V4UA95_9ROSI	4.5e-99	61.49	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015959mg PE=4 SV=1	[more]

BLAST of Cucsa.100140 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G48240.3	4.6e-71	50.85	unknown protein	[more]

BLAST of Cucsa.100140 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449453624\|ref\|XP_004144556.1\|	1.1e-178	100.00	PREDICTED: RRP15-like protein [Cucumis sativus]	[more]
gi\|659124195\|ref\|XP_008462030.1\|	3.9e-173	96.56	PREDICTED: RRP15-like protein [Cucumis melo]	[more]
gi\|641831953\|gb\|KDO50998.1\|	2.1e-102	62.14	hypothetical protein CISIN_1g0207781mg [Citrus sinensis]	[more]
gi\|641831954\|gb\|KDO50999.1\|	6.2e-102	62.46	hypothetical protein CISIN_1g0207781mg [Citrus sinensis]	[more]
gi\|568830248\|ref\|XP_006469413.1\|	4.0e-101	61.81	PREDICTED: RRP15-like protein isoform X1 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012459	Rrp15

Vocabulary: **Biological Process**
Term	Definition
GO:0006364	rRNA processing

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.100140.1	Cucsa.100140.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012459	Ribosomal RNA-processing protein 15	PANTHER	PTHR13245	FAMILY NOT NAMED	coord: 15..320 score: 3.1
IPR012459	Ribosomal RNA-processing protein 15	PFAM	PF07890	Rrp15p	coord: 129..248 score: 7.3
None	No IPR available	unknown	Coil	Coil	coord: 163..183 scor

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.100140	Cla015705	Watermelon (97103) v1	cgywmB130
Cucsa.100140	Csa7G031550	Cucumber (Chinese Long) v2	cgycuB111
Cucsa.100140	MELO3C024180	Melon (DHL92) v3.5.1	cgymeB121
Cucsa.100140	ClCG02G003040	Watermelon (Charleston Gray)	cgywcgB130
Cucsa.100140	CSPI07G02530	Wild cucumber (PI 183967)	cgycpiB112
Cucsa.100140	CmaCh11G013040	Cucurbita maxima (Rimu)	cgycmaB0215
Cucsa.100140	CmaCh19G008380	Cucurbita maxima (Rimu)	cgycmaB0216
Cucsa.100140	CmoCh19G008540	Cucurbita moschata (Rifu)	cgycmoB0210
Cucsa.100140	CmoCh11G018170	Cucurbita moschata (Rifu)	cgycmoB0209
Cucsa.100140	Lsi11G013320	Bottle gourd (USVL1VR-Ls)	cgylsiB122
Cucsa.100140	Cp4.1LG15g06730	Cucurbita pepo (Zucchini)	cgycpeB0206
Cucsa.100140	Cp4.1LG04g04260	Cucurbita pepo (Zucchini)	cgycpeB0209
Cucsa.100140	MELO3C024180.2	Melon (DHL92) v3.6.1	cgymedB119
Cucsa.100140	CsaV3_7G002370	Cucumber (Chinese Long) v3	cgycucB116
Cucsa.100140	Cla97C02G029550	Watermelon (97103) v2	cgywmbB125
Cucsa.100140	Bhi05G001313	Wax gourd	cgywgoB145
Cucsa.100140	Carg04131	Silver-seed gourd	carcgyB0237
Cucsa.100140	Carg18088	Silver-seed gourd	carcgyB1183

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.100140	Cucurbita maxima (Rimu)	cgycmaB0214
Cucsa.100140	Cucurbita maxima (Rimu)	cgycmaB0217
Cucsa.100140	Cucurbita moschata (Rifu)	cgycmoB0208
Cucsa.100140	Cucurbita moschata (Rifu)	cgycmoB0211
Cucsa.100140	Wild cucumber (PI 183967)	cgycpiB111
Cucsa.100140	Cucumber (Chinese Long) v2	cgycuB110
Cucsa.100140	Melon (DHL92) v3.5.1	cgymeB119
Cucsa.100140	Cucurbita pepo (Zucchini)	cgycpeB0207
Cucsa.100140	Cucurbita pepo (Zucchini)	cgycpeB0208
Cucsa.100140	Bottle gourd (USVL1VR-Ls)	cgylsiB121
Cucsa.100140	Melon (DHL92) v3.6.1	cgymedB116
Cucsa.100140	Silver-seed gourd	carcgyB0405
Cucsa.100140	Silver-seed gourd	carcgyB1182
Cucsa.100140	Cucumber (Chinese Long) v3	cgycucB115
Cucsa.100140	Cucumber (Gy14) v1	cgycgyB040