CSPI07G02530 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCCTCCTACCGGACGGCGCACTAACAGCTGCCGCAGCCTCAGCCTTCCGGCGAATTCGTTGTTGCCACCCTCCATCTTACACTCTCGCCTCTTCCAGCAATCTGAGTTGCTTATATCTGTTTTTCATTCTTCTTAGAAGCACACTGGTTCAGCCCCTTGTCATCGCCGCCGTTGCTCATTTTTCAGGTCTCCAAGGTTTTTTTTTTCGCTTTATTTTGTTTTGTTGGGCTATGTTGGTTTATTCTCTTCACCGACGGAGAAGAAAAATCGAGAGTGTTTTTTTTGGGGTTGTTGATTGCTTCTTCAACCAATGTTCAAGTAGTCTGAATGAAATTATAAAGTTAAGAATTTTTATTAGAGGGAAAAAAAGATTGAATCAAGAGGAATAAGGGAAAAAACTTATCATTCCTATCCGTGTTAGTAAATAAAATGATAAAATGTTTAAGAAGATGAACAAAGAAAAAGAGAAAATTCACCTAGTTTGTTTGGCTATAAAACGACTTGTTGGAATAGAAAGCCTGTGTTTAAATATATTAAAGTTATTGTTATCAATTAAAAACAAAATCAACATTGGACAAATAAACTAGAAAGATAACATTGAGTTTGAGTCTGATCGAACGACATTGAATCTTCTTGAATATTGAAGAAACTATGAATGCCTACGAACTGGCATATGGTGGTTTTTGTTAGACAGGCGTAAATTAAATTTATACATATATAAGAAATCTTATCGGGTAGAATTGTAAACAGGTGTTCATATATATTATGGGGTAGAATTGTAAACAGGTGTGTGTATATTAGTTTAAACTCATGTCATTTTTCAAACAATTGGTTTCATTTTTTTGGGACATCCGAAAACACTGATTTATAATCCTTCCAAATTCAGGGGTTTCAAACAGGGGTTAAGATCTTTTGGAATATTTGTTTCGGATAAGCTTTGCATTAGAATCAGGTACTATGACTGACGTCGGGAATGCGGTAGAATTGGTTAGAGGTGCAAAGAGGAGGAAAAAGATGGGTTCCAGGAACAATAAAAGGCCGAGGATGATGGGTGGAAGTGGAAACAAAGTTAAGATTGATAAGAAGATGAAGAAACTCTTCCAAAAACGGGCGCGGGAGTATAATTCAGACGATGACGATGATGATGGTGAGAAGGCTCCAAGAGTTAAAAAGGAGAGCAAAATTTTGGTGCGCAGTCATGAGGAGGAGGTTGGAGATGAAGAGTTTTCTGAGGGTGAAGAGGAAAGGAAGGATGTGAATGCAGATGTCGAGCTGTCTGAAGATGATGAAAATGGTGAAATTCAACCTGGTATAACAAAGTTTACAGAAGGTTGTAGAGCATTCCGAGCTGCATTCATGAGTATTCTCAAGAAGAACATATCTGATGAAACTCTGGTAGTTTATCTTAAATATGTCCAAATTGTTTTTAACAGTTGAAGTAATGAAGACATGATTGTGCCATATTTGTGATACAGGGTCCGATATTATCAGCAAACAAGAAGCTTGTTGCTGAAAAGCTTGCAGAAGAGGAAGCTGAGCGGAAGGTTAAAGGAGAGGCCAGGAAAGCAAAACAACTGGTATTTCCTTTTAAATCAAATATCTTGTTTGTTCTATGATTGAGCTTTTTCTTGAAATTGGTCGAATGTAAATGTTCGAATATTGCAGGTAGGAGAAAAAGGTCATGTGAAACCAGCTACATACCTGGATTCTCACGAAAAATTTCTTATTGGTGTTGCTACAAAAGGAGGTAGCATAGTTCTATTTTACTTTGAGATGGGCGTGGTTATCTTTTTTATTTTGACTTTGTTTATTATGTCTCTCATCATTCTAACACATTTATCTCCATGTGTATTGTTGCTTGCTGAATGTTAGTCGTCAAGTTGTTTAATGCTGTAAGTAGCCAAATTTTGATTTCAGACAACTTTTTTGCTGCATCCTCCTTAGCTATGTTGTGTTCATCGCTGAATTCCATTATTTTCAATATGACAGGTGAACAAGGCACAACATGCTCAGAAAGGGTTGAATCCTTCAAGAACTAAAGATGCTAAAGGTATTATGATCTCAGAAGTTTACAAAATCTCAGATTGTGTATGAGTATGAGTAATATAATCTTCAGTTTCTTTTCTCTTGCCGCATGAATATGTTGTCCCTAAATTTTCATTCAGTTGATGTCTTTGTCGTTGCATGCTGCATCATATTAAATCTTGTAGTTTAATTTTTCTAGTCATATGATGTATGTCTTTTATTTCTTTTCGTGGTTTCTGCTTTGTACTTGTTGAAAATTACGTTTGTATAGTCTGACCACGTATTGAACTTCTAATAAATGAGTCATGGTCAACTTGACTAATATATTGCCTTTGATAGGAAATATGTCTGTGATTGGAGTAATCAGTGATTTGAAGTTAGCCCCTCAAATTGATCGACATATTAGTTTCTCATTCTTACTCCCAGTCAATTAATGCCTTCCCCTGTTTGCTTATATAGTAATAGTATTATGTAATGTTCAGCGTAACCTTGTTAGACCCATTTTGTTTGTGTATCAAGATACTTATCCTTTATTTCCTGAATTGTGAATCTGAGTTGCCATTCAAGATTGAGGGTGAAACCATGTCTTGAGTGGTTTTTCATTCTATCATGTCTCATTCTGAGCAAATTATTTGGTTTATATTGCCAGCTATAAATAAACGCAGAAAAGAAGCTTTCTTTTCTGAGTTGGGCAAGCCAACTTTGTCTGCAACAAACAGTAATGCGAAGGTCAGTTATTTTTCTACTTTTTAGTTCTCAACTAACTGCTGGTAAATTCTATTTTTAATCTTTTACAAGCGATTTTAGTTTTTACAAACACCTAAGCTCGGTGCCCAGAGGCAAAGCTTATGCATGTCCATCATCCTTATTGTATGTGGGTAGTGGAATTGGAAGGGTAGGGATGCCCATGGTTGGGGCAAGAACAGGGATAACTTTCATGTCTCCACAAAATTTCTGTTAAATTTATGCAGATCGGGATAGGGATAGGGATCTCCTACGGGGCATTCTAATTTAATAATACATAATTAAAAAAGGTAAATGGGATGGGGAGCGGGGACCAAGCCCTATGGGGAAAATTGACATAGAAAGGGGTGTTGATTAAGGGAGTGAAACTCAGGTCACCATCATACACTATCTGAGTATCTGTTCTTTCATGTCCATAATGCAACAAACTCAAATAGCCATCTCTGTGTTGAACAGTTAAACACATCAGGTGGTGCAGCGGACACTGAAGGCCCTGCCTGGGCTCCGTTACGCGACAATTATATGCTGACCAATTCCAAATTAAAAGACTGGGATAAGATGCCAGTAAGATACGATATATTTTCAAAGCCTACTGTAGGTTGGATCTCTGTTTTTATCAGTTGTGATATTCATATCATTTGGATTGATTATACGTGCAGGATAATATGATGACAGCGGCAGAGGACAATGGGAGGGTGTTGGAAGACAGTAGTTCAGATGAAGATGATTGACTAGTCTAACACTACAAGTGAATTGCCTAGTTTGTAGTAGCTTTCAAGTTGCCTATAGTATACTTAAAAAGCTAAGCTCGATTTTGGCTTGTTAGCAAATTCAGCACATGTATGTCTCAGCTATATGTTATCCAGCAAAAAGAAAGAATTTCCCCCCTATTTTATTTTCCAATTTTTTAGTCTGTGCCATCTGGTGAGATTAAATTGTATAAATGCCGCCCATTTTGTAGGATTTTTGAGCAAATTGGTTTAAAGATACAAATTTTGGTCTACATTTGTATGGATTGCACAAACAGTTTGAAAGAAATGTGTATTTAACGTACCTATCCAATG ATGACTGACGTCGGGAATGCGGTAGAATTGGTTAGAGGTGCAAAGAGGAGGAAAAAGATGGGTTCCAGGAACAATAAAAGGCCGAGGATGATGGGTGGAAGTGGAAACAAAGTTAAGATTGATAAGAAGATGAAGAAACTCTTCCAAAAACGGGCGCGGGAGTATAATTCAGACGATGACGATGATGATGGTGAGAAGGCTCCAAGAGTTAAAAAGGAGAGCAAAATTTTGGTGCGCAGTCATGAGGAGGAGGTTGGAGATGAAGAGTTTTCTGAGGGTGAAGAGGAAAGGAAGGATGTGAATGCAGATGTCGAGCTGTCTGAAGATGATGAAAATGGTGAAATTCAACCTGGTATAACAAAGTTTACAGAAGGTTGTAGAGCATTCCGAGCTGCATTCATGAGTATTCTCAAGAAGAACATATCTGATGAAACTCTGGGTCCGATATTATCAGCAAACAAGAAGCTTGTTGCTGAAAAGCTTGCAGAAGAGGAAGCTGAGCGGAAGGTTAAAGGAGAGGCCAGGAAAGCAAAACAACTGGTAGGAGAAAAAGGTCATGTGAAACCAGCTACATACCTGGATTCTCACGAAAAATTTCTTATTGGTGTTGCTACAAAAGGAGTCGTCAAGTTGTTTAATGCTGTGAACAAGGCACAACATGCTCAGAAAGGGTTGAATCCTTCAAGAACTAAAGATGCTAAAGCTATAAATAAACGCAGAAAAGAAGCTTTCTTTTCTGAGTTGGGCAAGCCAACTTTGTCTGCAACAAACAGTAATGCGAAGTTAAACACATCAGGTGGTGCAGCGGACACTGAAGGCCCTGCCTGGGCTCCGTTACGCGACAATTATATGCTGACCAATTCCAAATTAAAAGACTGGGATAAGATGCCAGATAATATGATGACAGCGGCAGAGGACAATGGGAGGGTGTTGGAAGACAGTAGTTCAGATGAAGATGATTGA ATGACTGACGTCGGGAATGCGGTAGAATTGGTTAGAGGTGCAAAGAGGAGGAAAAAGATGGGTTCCAGGAACAATAAAAGGCCGAGGATGATGGGTGGAAGTGGAAACAAAGTTAAGATTGATAAGAAGATGAAGAAACTCTTCCAAAAACGGGCGCGGGAGTATAATTCAGACGATGACGATGATGATGGTGAGAAGGCTCCAAGAGTTAAAAAGGAGAGCAAAATTTTGGTGCGCAGTCATGAGGAGGAGGTTGGAGATGAAGAGTTTTCTGAGGGTGAAGAGGAAAGGAAGGATGTGAATGCAGATGTCGAGCTGTCTGAAGATGATGAAAATGGTGAAATTCAACCTGGTATAACAAAGTTTACAGAAGGTTGTAGAGCATTCCGAGCTGCATTCATGAGTATTCTCAAGAAGAACATATCTGATGAAACTCTGGGTCCGATATTATCAGCAAACAAGAAGCTTGTTGCTGAAAAGCTTGCAGAAGAGGAAGCTGAGCGGAAGGTTAAAGGAGAGGCCAGGAAAGCAAAACAACTGGTAGGAGAAAAAGGTCATGTGAAACCAGCTACATACCTGGATTCTCACGAAAAATTTCTTATTGGTGTTGCTACAAAAGGAGTCGTCAAGTTGTTTAATGCTGTGAACAAGGCACAACATGCTCAGAAAGGGTTGAATCCTTCAAGAACTAAAGATGCTAAAGCTATAAATAAACGCAGAAAAGAAGCTTTCTTTTCTGAGTTGGGCAAGCCAACTTTGTCTGCAACAAACAGTAATGCGAAGTTAAACACATCAGGTGGTGCAGCGGACACTGAAGGCCCTGCCTGGGCTCCGTTACGCGACAATTATATGCTGACCAATTCCAAATTAAAAGACTGGGATAAGATGCCAGATAATATGATGACAGCGGCAGAGGACAATGGGAGGGTGTTGGAAGACAGTAGTTCAGATGAAGATGATTGA
BLAST of CSPI07G02530 vs. Swiss-Prot
Match: RRP15_BOVIN (RRP15-like protein OS=Bos taurus GN=RRP15 PE=2 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 4.0e-08 Identity = 86/277 (31.05%), Postives = 125/277 (45.13%), Query Frame = 1
BLAST of CSPI07G02530 vs. Swiss-Prot
Match: RRP15_RAT (RRP15-like protein OS=Rattus norvegicus GN=Rrp15 PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 5.2e-08 Identity = 70/247 (28.34%), Postives = 120/247 (48.58%), Query Frame = 1
BLAST of CSPI07G02530 vs. Swiss-Prot
Match: RRP15_MOUSE (RRP15-like protein OS=Mus musculus GN=Rrp15 PE=1 SV=2) HSP 1 Score: 57.0 bits (136), Expect = 4.4e-07 Identity = 70/253 (27.67%), Postives = 122/253 (48.22%), Query Frame = 1
BLAST of CSPI07G02530 vs. Swiss-Prot
Match: RRP15_HUMAN (RRP15-like protein OS=Homo sapiens GN=RRP15 PE=1 SV=2) HSP 1 Score: 53.9 bits (128), Expect = 3.7e-06 Identity = 84/282 (29.79%), Postives = 128/282 (45.39%), Query Frame = 1
BLAST of CSPI07G02530 vs. TrEMBL
Match: A0A0A0K320_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G031550 PE=4 SV=1) HSP 1 Score: 605.1 bits (1559), Expect = 4.8e-170 Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 1
BLAST of CSPI07G02530 vs. TrEMBL
Match: A0A067E7D6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0207781mg PE=4 SV=1) HSP 1 Score: 351.3 bits (900), Expect = 1.3e-93 Identity = 192/309 (62.14%), Postives = 235/309 (76.05%), Query Frame = 1
BLAST of CSPI07G02530 vs. TrEMBL
Match: A0A067EAS1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0207781mg PE=4 SV=1) HSP 1 Score: 349.7 bits (896), Expect = 3.7e-93 Identity = 193/309 (62.46%), Postives = 237/309 (76.70%), Query Frame = 1
BLAST of CSPI07G02530 vs. TrEMBL
Match: W9S4P7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006868 PE=4 SV=1) HSP 1 Score: 344.4 bits (882), Expect = 1.5e-91 Identity = 206/337 (61.13%), Postives = 240/337 (71.22%), Query Frame = 1
BLAST of CSPI07G02530 vs. TrEMBL
Match: V4UA95_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015959mg PE=4 SV=1) HSP 1 Score: 340.1 bits (871), Expect = 2.9e-90 Identity = 190/309 (61.49%), Postives = 233/309 (75.40%), Query Frame = 1
BLAST of CSPI07G02530 vs. TAIR10
Match: AT5G48240.3 (AT5G48240.3 unknown protein) HSP 1 Score: 242.3 bits (617), Expect = 4.2e-64 Identity = 150/295 (50.85%), Postives = 198/295 (67.12%), Query Frame = 1
BLAST of CSPI07G02530 vs. NCBI nr
Match: gi|449453624|ref|XP_004144556.1| (PREDICTED: RRP15-like protein [Cucumis sativus]) HSP 1 Score: 605.1 bits (1559), Expect = 6.9e-170 Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 1
BLAST of CSPI07G02530 vs. NCBI nr
Match: gi|659124195|ref|XP_008462030.1| (PREDICTED: RRP15-like protein [Cucumis melo]) HSP 1 Score: 586.6 bits (1511), Expect = 2.6e-164 Identity = 309/320 (96.56%), Postives = 313/320 (97.81%), Query Frame = 1
BLAST of CSPI07G02530 vs. NCBI nr
Match: gi|641831953|gb|KDO50998.1| (hypothetical protein CISIN_1g0207781mg [Citrus sinensis]) HSP 1 Score: 351.3 bits (900), Expect = 1.8e-93 Identity = 192/309 (62.14%), Postives = 235/309 (76.05%), Query Frame = 1
BLAST of CSPI07G02530 vs. NCBI nr
Match: gi|641831954|gb|KDO50999.1| (hypothetical protein CISIN_1g0207781mg [Citrus sinensis]) HSP 1 Score: 349.7 bits (896), Expect = 5.3e-93 Identity = 193/309 (62.46%), Postives = 237/309 (76.70%), Query Frame = 1
BLAST of CSPI07G02530 vs. NCBI nr
Match: gi|568830248|ref|XP_006469413.1| (PREDICTED: RRP15-like protein isoform X1 [Citrus sinensis]) HSP 1 Score: 347.1 bits (889), Expect = 3.4e-92 Identity = 191/309 (61.81%), Postives = 234/309 (75.73%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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