Cucsa.099610 (gene) Cucumber (Gy14) v1

NameCucsa.099610
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold00926 : 339864 .. 340810 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTAAGAAGGTACCACATCTATCTTTCCTATCTAAAAAATACACAGAAACAAGTAATAAACTTTCAATGCTTTAGAAGAATGAACCGAATTTTACATCACAAGGTCTATCTAAACTTGGGCTTAAATTACAATTCTAAACAGAACTCAAAACATTTTAAGAACTGACTTCATAGCTAAATCGCTACTCCACAAAGACAGGAAATCTTTCATGATAAAAGAAATCTAACAGGGATAACCTCTGGGATCTTGTTAAACATTTTCCTTCTACTTGATCGACTTCTTCTAATTTGTCTAGAAATTATAGCATACCTCAATTACTCACTAGATGAGAAGTTTATCGTGATCCTTTGGTAAGTGAGAATATCTCATCTCCTCCTTTTCTATCTCCCCTTTGACAATGAAGTTTTTGTTTCTTAGAAAATAAATCGAATTTGCTAGACACATAGATTCATCACGAGTAAATTTCAAAAATACTATTTATTTTCAGAGAAGGCTTCATTTGCCTCAGCTACTCCGATGAAACATGGAAGGATGGAAGCTAATGAATCAGTTAAATTCGGTGGTAATCACCTGGTACATATTTGTGCTCATTTCACCTTATAGCCAAAAGGGTACCGATGCCACAACTAACCTCGACGAAGAAGGAAACTGTGTAAACTCCGCAAACCCAAATGGAAGAAAGGCAAGAAGAGTAAATGGAAATCAAAGTTTCAAAAATACTAATAAGATACTGATAAATTTTGGAGAGAAGCGGGAATCACGAATCAAACTTTGAATATAGTCATAAAACCATTCAAACATTAACGGAAATGGAGATGATAGCAGCTACTCCCAACCAAAAaGAAAAAAAAaaTCAGAGAAATCGCCATTAGAATCAAGAAGAAAACAGAGCCACAGAACGACCGAATAGTCAATAAACGACGCCGTAGAGCTTCATCAAAACTGA

mRNA sequence

ATTAAGAAGGTACCACATCTATCTTTCCTATCTAAAAAATACACAGAAACAAGTAATAAACTTTCAATGCTTTAGAAGAATGAACCGAATTTTACATCACAAGGTCTATCTAAACTTGGGCTTAAATTACAATTCTAAACAGAACTCAAAACATTTTAAGAACTGACTTCATAGCTAAATCGCTACTCCACAAAGACAGGAaatctttcatgataaaagaaatctaacagggataacctctgggatcttgttaaacattttccttctacttgatcgacttcttctaatttgtctagaaattatagcatacctcaattactcactagatgagaagtttatcgtgatcctttggtaagtgagaatatctcatctcctccttttctatctcccctttgacaatgaagtttttgtttcttagaaaataaatCGAATTTGCTAGACACATAGATTCATCACGAGTAAATTTCAAAAATACTATTTATTTTCAGAGAAGGCTTCATTTGCCTCAGCTACTCCGATGAAACATGGAAGGATGGAAGCTAATGAATCAGTTAAATTCGGTGGTAATCACCTGGTACATATTTGTGCTCATTTCACCTTATAGCCAAAAGGGTACCGATGCCACAACTAACCTCGACGAAGAAGGAAACTGTGTAAACTCCGCAAACCCAAATGGAAGAAAGGCAAGAAGAGTAAATGGAAATCAAAGTTTCAAAAATACTAATAAGATACTGATAAATTTTGGAGAGAAGCGGGAATCACGAATCAAACTTTGAATATAGTCATAAAACCATTCAAACATTAACGGAAATGGAGATGATAGCAGCTACTCCCAACCAAAAAGAAAAAAAAAATCAGAGAAATCGCCATTAGAATCAAGAAGAAAACAGAGCCACAGAACGACCGAATAGTCAATAAACGACGCCGTAGAGCTTCATCAAAACTGA

Coding sequence (CDS)

ATGGAAGGATGGAAGCTAATGAATCAGTTAAATTCGGTGGTAATCACCTGGTACATATTTGTGCTCATTTCACCTTATAGCCAAAAGGGTACCGATGCCACAACTAACCTCGACGAAGAAGGAAACTGTGTAAACTCCGCAAACCCAAATGGAAGAAAGGCAAGAAGAGTAAATGGAAATCAAAGTTTCAAAAATACTAATAAGATACTGATAAATTTTGGAGAGAAGCGGGAATCACGAATCAAACTTTGA

Protein sequence

MEGWKLMNQLNSVVITWYIFVLISPYSQKGTDATTNLDEEGNCVNSANPNGRKARRVNGNQSFKNTNKILINFGEKRESRIKL*
BLAST of Cucsa.099610 vs. TrEMBL
Match: A0A0A0K670_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G024050 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.2e-24
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 1

Query: 1  MEGWKLMNQLNSVVITWYIFVLISPYSQKGTDATTNLDEEGNCVNSANPNGRKARR 57
          MEGWKLMNQLNSVVITWYIFVLISPYSQKGTDATTNLDEEGNCVNSANPNGRKARR
Sbjct: 1  MEGWKLMNQLNSVVITWYIFVLISPYSQKGTDATTNLDEEGNCVNSANPNGRKARR 56

BLAST of Cucsa.099610 vs. NCBI nr
Match: gi|700188098|gb|KGN43331.1| (hypothetical protein Csa_7G024050 [Cucumis sativus])

HSP 1 Score: 120.2 bits (300), Expect = 1.8e-24
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 1

Query: 1  MEGWKLMNQLNSVVITWYIFVLISPYSQKGTDATTNLDEEGNCVNSANPNGRKARR 57
          MEGWKLMNQLNSVVITWYIFVLISPYSQKGTDATTNLDEEGNCVNSANPNGRKARR
Sbjct: 1  MEGWKLMNQLNSVVITWYIFVLISPYSQKGTDATTNLDEEGNCVNSANPNGRKARR 56

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K670_CUCSA1.2e-24100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G024050 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700188098|gb|KGN43331.1|1.8e-24100.00hypothetical protein Csa_7G024050 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.099610.1Cucsa.099610.1mRNA