Csa7G024050 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G024050
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 1291269 .. 1292001 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGATGGAAGCTAATGAATCAGTTAAATTCGGTGGTAATCACCTGGTACATATTTGTGCTCATTTCACCTTATAGCCAAAAGGGTACCGATGCCACAACTAACCTCGACGAAGAAGGAAACTGTGTAAACTCCGCAAACCCAAATGGAAGAAAGGCAAGAAGAGTAAATGGAAATCAAAGTTTCAAAAATACTAATAAGATACTGATAAATTTTGGAGAGAAGCGGGAATCACGAATCAAACTTTGAATATAGTCATAAAACCATTCAAACATTAACGGAAATGGAGATGATAGCAGCTACTCCCAACCAAAAAGAAAAAAAAAATCAGAGAAATCGCCATTAGAATCAAGAAGAAAACAGAGCCACAGAACGACCGAATAGTCAATAAACGACGCCGTAGAGCTTCATCAAAACTGATTGGTCACAGAGACGAAAGAAAGGAATTCCCTTACCCGAATCAGGAATAAACCCTAGAGAACTGTGCAGCAGAAGCACGGGGAAGGCACGTGACTTGGGGAGTCCCGTGCGTCCCGTCAGCGTCCCACTACGACGGAGGGGAAGAAAATTTTGCCAATTGCTAACCTCCAAATTCCAATACACCTCTATCCTTATCGTCTCTTTATATCAATTCCTTTCACCATCAAAGCTTGAGCTAGCGATCTTCGTCACTCTCGGTCAGAATGACGCACATCGTCCACCGTTGCGGCCGGTCGCCGGCGTTGCTTGA

mRNA sequence

ATGGAAGGATGGAAGCTAATGAATCAGTTAAATTCGGTGGTAATCACCTGGTACATATTTGTGCTCATTTCACCTTATAGCCAAAAGGGTACCGATGCCACAACTAACCTCGACGAAGAAGGAAACTGTGTAAACTCCGCAAACCCAAATGGAAGAAAGGCAAGAAGAAGACGAAAGAAAGGAATTCCCTTACCCGAATCAGGAATAAACCCTAGAGAACTGTGCAGCAGAAGCACGGGGAAGGCACGTGACTTGGGGAGTCCCGTGCGTCCCGTCAGCGTCCCACTACGACGGAGGGGAAGAAAATTTTGCCAATTGCTAACCTCCAAATTCCAATACACCTCTATCCTTATCGTCTCTTTATATCAATTCCTTTCACCATCAAAGCTTGAGCTAGCGATCTTCGTCACTCTCGGTCAGAATGACGCACATCGTCCACCGTTGCGGCCGGTCGCCGGCGTTGCTTGA

Coding sequence (CDS)

ATGGAAGGATGGAAGCTAATGAATCAGTTAAATTCGGTGGTAATCACCTGGTACATATTTGTGCTCATTTCACCTTATAGCCAAAAGGGTACCGATGCCACAACTAACCTCGACGAAGAAGGAAACTGTGTAAACTCCGCAAACCCAAATGGAAGAAAGGCAAGAAGAAGACGAAAGAAAGGAATTCCCTTACCCGAATCAGGAATAAACCCTAGAGAACTGTGCAGCAGAAGCACGGGGAAGGCACGTGACTTGGGGAGTCCCGTGCGTCCCGTCAGCGTCCCACTACGACGGAGGGGAAGAAAATTTTGCCAATTGCTAACCTCCAAATTCCAATACACCTCTATCCTTATCGTCTCTTTATATCAATTCCTTTCACCATCAAAGCTTGAGCTAGCGATCTTCGTCACTCTCGGTCAGAATGACGCACATCGTCCACCGTTGCGGCCGGTCGCCGGCGTTGCTTGA

Protein sequence

MEGWKLMNQLNSVVITWYIFVLISPYSQKGTDATTNLDEEGNCVNSANPNGRKARRRRKKGIPLPESGINPRELCSRSTGKARDLGSPVRPVSVPLRRRGRKFCQLLTSKFQYTSILIVSLYQFLSPSKLELAIFVTLGQNDAHRPPLRPVAGVA*
Homology
[Close]
BLAST of Csa7G024050 vs. TrEMBL
Match: A0A0A0K670_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G024050 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 6.3e-83
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1 

Query: 1   MEGWKLMNQLNSVVITWYIFVLISPYSQKGTDATTNLDEEGNCVNSANPNGRKARRRRKK 60
           MEGWKLMNQLNSVVITWYIFVLISPYSQKGTDATTNLDEEGNCVNSANPNGRKARRRRKK
Sbjct: 1   MEGWKLMNQLNSVVITWYIFVLISPYSQKGTDATTNLDEEGNCVNSANPNGRKARRRRKK 60

Query: 61  GIPLPESGINPRELCSRSTGKARDLGSPVRPVSVPLRRRGRKFCQLLTSKFQYTSILIVS 120
           GIPLPESGINPRELCSRSTGKARDLGSPVRPVSVPLRRRGRKFCQLLTSKFQYTSILIVS
Sbjct: 61  GIPLPESGINPRELCSRSTGKARDLGSPVRPVSVPLRRRGRKFCQLLTSKFQYTSILIVS 120

Query: 121 LYQFLSPSKLELAIFVTLGQNDAHRPPLRPVAGVA 156
           LYQFLSPSKLELAIFVTLGQNDAHRPPLRPVAGVA
Sbjct: 121 LYQFLSPSKLELAIFVTLGQNDAHRPPLRPVAGVA 155

[Close]
BLAST of Csa7G024050 vs. NCBI nr
Match: gi|700188098|gb|KGN43331.1| (hypothetical protein Csa_7G024050 [Cucumis sativus])

HSP 1 Score: 314.7 bits (805), Expect = 9.1e-83
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1 

Query: 1   MEGWKLMNQLNSVVITWYIFVLISPYSQKGTDATTNLDEEGNCVNSANPNGRKARRRRKK 60
           MEGWKLMNQLNSVVITWYIFVLISPYSQKGTDATTNLDEEGNCVNSANPNGRKARRRRKK
Sbjct: 1   MEGWKLMNQLNSVVITWYIFVLISPYSQKGTDATTNLDEEGNCVNSANPNGRKARRRRKK 60

Query: 61  GIPLPESGINPRELCSRSTGKARDLGSPVRPVSVPLRRRGRKFCQLLTSKFQYTSILIVS 120
           GIPLPESGINPRELCSRSTGKARDLGSPVRPVSVPLRRRGRKFCQLLTSKFQYTSILIVS
Sbjct: 61  GIPLPESGINPRELCSRSTGKARDLGSPVRPVSVPLRRRGRKFCQLLTSKFQYTSILIVS 120

Query: 121 LYQFLSPSKLELAIFVTLGQNDAHRPPLRPVAGVA 156
           LYQFLSPSKLELAIFVTLGQNDAHRPPLRPVAGVA
Sbjct: 121 LYQFLSPSKLELAIFVTLGQNDAHRPPLRPVAGVA 155

The following BLAST results are available for this feature:
BLAST of Csa7G024050 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K670_CUCSA6.3e-83100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G024050 PE=4 SV=1[more]
BLAST of Csa7G024050 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188098|gb|KGN43331.1|9.1e-83100.00hypothetical protein Csa_7G024050 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009626 plant-type hypersensitive response
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU125726cucumber EST collection version 3.0transcribed_cluster
CU127368cucumber EST collection version 3.0transcribed_cluster
CU130957cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G024050.1Csa7G024050.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU127368CU127368transcribed_cluster
CU130957CU130957transcribed_cluster
CU125726CU125726transcribed_cluster