Cucsa.097460 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.097460
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	40S ribosomal protein S29
Location	scaffold00919 : 2672362 .. 2674023 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCACAAAATTTTGTGCTTCACGTTGTGATTTCGGAGCATCTCAATACCCTAACAATCATGGGACACTCGAACGTTTGGAACTCTCATCCTAAGAACTATGGACCTGGTTCTCGCACTTGGTAAGCAAATATCTTCTCACTCATCTACTTTTTATTGGTGGAACATGAATCTCGAACACAATGTTTCCTTTTTTtTTTttGTGTCTAGTTTATTTCAACGACTTGAGAGTTCATCAACTGATTAGCTCATATTAACTTTGCGCGCTTCGTAATGGGACCTGAAGAATATTGTTTGATTGAAGATTTATTTATTATGTATTACTTTTCTTGTTTTGATAGATAACCAGATACCTACGTTTCAGTTCGATTTTTAATATTTTAACATGGCTTTAAGTTTAATCTGTTGTTCTAAAGGTTTTTCCAACTTGGATTCGATTTTGTGATGCTTAAAAGTTTGTGTTGACTTTTGGGGTTTCTGTTATCGCGTTGTAAAAGGCTTCGCTAATTGCAGAAGATTTATAATTTGAACCCGGATTTACATATCGATCGATTATGTCATGGTTTTGTTAAGGCGGATGAAAGGTTATAGCTGATGTTATGTGATGTATGGGATCTGTAGTAGGCGAGAAAATCTTTATACTTTATGCGTATTTTATCCTTCTCTCCTTTAATCCGAATGAATCACTTTGCTTGGTTGAGTTTTTTtAGTTCCTACGTCTATTAGATCAATTTTTGTCGGTTACCCAGAAGTTATTGAGTCTACCTAAGAGTAATGGAACACATTTTTATCCTTAATGGATCTCTTAGGCTTCATTCGGTAGCCTTTTTGTTTTtGGTTTTTGGATTTTGCAAATTAAGCAGATTTCCTCCCACTTTTGCTTACCTTGGTGTGGAAAATAGTTGAATATTTAGCCAAATTTTTAGTAACtATTTTTTTTTtGGTTTTCAAATTTTGGCTTGGTTTTTTAAATCATTGGTTAAAAGTAAATAACATAACAAGAAATTTAAATTTGAAGTAGTGTTTGTAGGCTCAATTTTTTTTTTttAAAAAAaGACCTAATGGCTAGGAAATGAGGCCTTGGTGGTTAAAGGTTGTCTATAGTATTTGTTGACTTTTGAGAAAGCTGAAATTCAATAGCTCCTTTCTTTGAATCCTCTTCTCAGTCGTGTGTGCGGAAATCCCCATGGGTTGATCAGGAAGTATGGACTTATGTGTTGCAGACAATGCTTCCGCAGCAATGCCAAGGAAATTGGTTTCATCAAGGCAAGTTAATTTTGTGTTATCATCATTTATTTGATGTCACATACACACACAGATTTATCTTCTACATTCTCTAAACTTTGAACTTTCCCATTTGTGCAGTACCGCTAAGAAGCTAATTATCCCTAGAAGAGAGAATGGGTTGAATTTACATTGAAGAAGGTTTCCCATGTTTTGCTTTTGTTTACTCAGTATGGAATATGAAATGATTGTCAGAAGACGTTTTTGACACTTTTGTTCTGAACATTTAAAGTTTCTTAATTGAGCTTCTTGAGATTATTTTGACATATATTCCTTCCATTATTATTTTTCAGTTCTTAAGCCTGTTTGATGTGCGTGATGCCTAGTCAGTTTAGGATTCGGAGGGTTTAGGCTATATGGTATCGTTAATCAGTTTGTG

mRNA sequence

CCTCACAAAATTTTGTGCTTCACGTTGTGATTTCGGAGCATCTCAATACCCTAACAATCATGGGACACTCGAACGTTTGGAACTCTCATCCTAAGAACTATGGACCTGGTTCTCGCACTTGTCGTGTGTGCGGAAATCCCCATGGGTTGATCAGGAAGTATGGACTTATGTGTTGCAGACAATGCTTCCGCAGCAATGCCAAGGAAATTGGTTTCATCAAGTACCGCTAAGAAGCTAATTATCCCTAGAAGAGAGAATGGGTTGAATTTACATTGAAGAAGGTTTCCCATGTTTTGCTTTTGTTTACTCAGTATGGAATATGAAATGATTGTCAGAAGACGTTTTTGACACTTTTGTTCTGAACATTTAAAGTTTCTTAATTGAGCTTCTTGAGATTATTTTGACATATATTCCTTCCATTATTATTTTTCAGTTCTTAAGCCTGTTTGATGTGCGTGATGCCTAGTCAGTTTAGGATTCGGAGGGTTTAGGCTATATGGTATCGTTAATCAGTTTGTG

Coding sequence (CDS)

ATGGGACACTCGAACGTTTGGAACTCTCATCCTAAGAACTATGGACCTGGTTCTCGCACTTGTCGTGTGTGCGGAAATCCCCATGGGTTGATCAGGAAGTATGGACTTATGTGTTGCAGACAATGCTTCCGCAGCAATGCCAAGGAAATTGGTTTCATCAAGTACCGCTAA

Protein sequence

MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR*

Homology

[Close]

BLAST of Cucsa.097460 vs. Swiss-Prot
Match: RS29_ARATH (40S ribosomal protein S29 OS=Arabidopsis thaliana GN=RPS29A PE=3 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 4.4e-27
Identity = 52/56 (92.86%), Postives = 52/56 (92.86%), Query Frame = 1


Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Sbjct: 1  MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56

[Close]

BLAST of Cucsa.097460 vs. Swiss-Prot
Match: RS29_WHEAT (40S ribosomal protein S29 OS=Triticum aestivum GN=RPS29 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 7.5e-27
Identity = 51/56 (91.07%), Postives = 53/56 (94.64%), Query Frame = 1


Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSNVWNSHPKNYG GSR CRVCGN HGLIRKYGLMCCRQCFRS+AK+IGFIKYR
Sbjct: 1  MGHSNVWNSHPKNYGAGSRVCRVCGNSHGLIRKYGLMCCRQCFRSDAKDIGFIKYR 56

[Close]

BLAST of Cucsa.097460 vs. Swiss-Prot
Match: RS29_GRIJA (40S ribosomal protein S29 OS=Griffithsia japonica GN=RPS29 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 3.1e-20
Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 1


Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGH N+W SHP+ YG GSR+C++CGN HGLIRKY +  CRQCFR  AK+IGFIKYR
Sbjct: 1  MGHQNIWYSHPRKYGKGSRSCKICGNKHGLIRKYSMNICRQCFREYAKDIGFIKYR 56

[Close]

BLAST of Cucsa.097460 vs. Swiss-Prot
Match: RS29_IXOSC (40S ribosomal protein S29 OS=Ixodes scapularis GN=RpS29 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 4.9e-18
Identity = 38/54 (70.37%), Postives = 42/54 (77.78%), Query Frame = 1


Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK 55
          MGH N+W SHP+ YGPGSR CRVC N HGLIRKYGL  CR+CFR  A +IGF K
Sbjct: 1  MGHENIWYSHPRKYGPGSRYCRVCANHHGLIRKYGLNICRRCFRQYAADIGFKK 54

[Close]

BLAST of Cucsa.097460 vs. Swiss-Prot
Match: RS29_ASHGO (40S ribosomal protein S29 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPS29 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 8.3e-18
Identity = 39/56 (69.64%), Postives = 42/56 (75.00%), Query Frame = 1


Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          M H NVW SHP+NYG GSR CRVC +  GLIRKYGL  CRQCFR  A +IGF KYR
Sbjct: 1  MAHENVWFSHPRNYGKGSRQCRVCASHSGLIRKYGLNICRQCFREKANDIGFHKYR 56

[Close]

BLAST of Cucsa.097460 vs. TrEMBL
Match: A0A0B2PC09_GLYSO (40S ribosomal protein S29 OS=Glycine soja GN=glysoja_020036 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 3.6e-28
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 1


Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Sbjct: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 56

[Close]

BLAST of Cucsa.097460 vs. TrEMBL
Match: B9R720_RICCO (40S ribosomal protein S29, putative OS=Ricinus communis GN=RCOM_1587780 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 3.6e-28
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 1


Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Sbjct: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 56

[Close]

BLAST of Cucsa.097460 vs. TrEMBL
Match: A0A0A0L3R9_CUCSA (40S ribosomal protein S29 OS=Cucumis sativus GN=Csa_4G642380 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 3.6e-28
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 1


Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Sbjct: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 56

[Close]

BLAST of Cucsa.097460 vs. TrEMBL
Match: A9P9S8_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 8.1e-28
Identity = 54/56 (96.43%), Postives = 56/56 (100.00%), Query Frame = 1


Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSN+WNSHPKNYGPGSRTCRVCGNPHG+IRKYGLMCCRQCFRSNAKEIGFIKYR
Sbjct: 1  MGHSNIWNSHPKNYGPGSRTCRVCGNPHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 56

[Close]

BLAST of Cucsa.097460 vs. TrEMBL
Match: V7BB27_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G043800g PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 1.4e-27
Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 1


Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSNVWNSHPK+YGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Sbjct: 1  MGHSNVWNSHPKSYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 56

[Close]

BLAST of Cucsa.097460 vs. TAIR10
Match: AT3G43980.1 (AT3G43980.1 Ribosomal protein S14p/S29e family protein)

HSP 1 Score: 120.9 bits (302), Expect = 2.5e-28
Identity = 52/56 (92.86%), Postives = 52/56 (92.86%), Query Frame = 1


Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Sbjct: 1  MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56

[Close]

BLAST of Cucsa.097460 vs. TAIR10
Match: AT3G44010.1 (AT3G44010.1 Ribosomal protein S14p/S29e family protein)

HSP 1 Score: 120.9 bits (302), Expect = 2.5e-28
Identity = 52/56 (92.86%), Postives = 52/56 (92.86%), Query Frame = 1


Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Sbjct: 1  MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56

[Close]

BLAST of Cucsa.097460 vs. TAIR10
Match: AT4G33865.1 (AT4G33865.1 Ribosomal protein S14p/S29e family protein)

HSP 1 Score: 120.9 bits (302), Expect = 2.5e-28
Identity = 52/56 (92.86%), Postives = 52/56 (92.86%), Query Frame = 1


Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Sbjct: 1  MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56

[Close]

BLAST of Cucsa.097460 vs. NCBI nr
Match: gi|225442077|ref|XP_002271801.1| (PREDICTED: 40S ribosomal protein S29-like [Vitis vinifera])

HSP 1 Score: 131.3 bits (329), Expect = 5.2e-28
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 1


Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Sbjct: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 56

[Close]

BLAST of Cucsa.097460 vs. NCBI nr
Match: gi|747063168|ref|XP_011078121.1| (PREDICTED: 40S ribosomal protein S29 [Sesamum indicum])

HSP 1 Score: 131.0 bits (328), Expect = 6.8e-28
Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 1


Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSN+WNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Sbjct: 1  MGHSNIWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 56

[Close]

BLAST of Cucsa.097460 vs. NCBI nr
Match: gi|1009143052|ref|XP_015889056.1| (PREDICTED: 40S ribosomal protein S29-like [Ziziphus jujuba])

HSP 1 Score: 130.6 bits (327), Expect = 8.9e-28
Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 1


Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYG+MCCRQCFRSNAKEIGFIKYR
Sbjct: 37 MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGIMCCRQCFRSNAKEIGFIKYR 92

[Close]

BLAST of Cucsa.097460 vs. NCBI nr
Match: gi|1009150100|ref|XP_015892836.1| (PREDICTED: 40S ribosomal protein S29 [Ziziphus jujuba])

HSP 1 Score: 130.6 bits (327), Expect = 8.9e-28
Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 1


Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYG+MCCRQCFRSNAKEIGFIKYR
Sbjct: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGIMCCRQCFRSNAKEIGFIKYR 56

[Close]

BLAST of Cucsa.097460 vs. NCBI nr
Match: gi|1009150098|ref|XP_015892835.1| (PREDICTED: 40S ribosomal protein S29 [Ziziphus jujuba])

HSP 1 Score: 130.6 bits (327), Expect = 8.9e-28
Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 1


Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSNVWNSHPKNYGPGSRTCRVCGNPHG+IRKYGLMCCRQCFRSNAKEIGFIKYR
Sbjct: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 56

The following BLAST results are available for this feature:

BLAST of Cucsa.097460 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RS29_ARATH	4.4e-27	92.86	40S ribosomal protein S29 OS=Arabidopsis thaliana GN=RPS29A PE=3 SV=2	[more]
RS29_WHEAT	7.5e-27	91.07	40S ribosomal protein S29 OS=Triticum aestivum GN=RPS29 PE=1 SV=1	[more]
RS29_GRIJA	3.1e-20	69.64	40S ribosomal protein S29 OS=Griffithsia japonica GN=RPS29 PE=3 SV=1	[more]
RS29_IXOSC	4.9e-18	70.37	40S ribosomal protein S29 OS=Ixodes scapularis GN=RpS29 PE=3 SV=1	[more]
RS29_ASHGO	8.3e-18	69.64	40S ribosomal protein S29 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / F...	[more]

BLAST of Cucsa.097460 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0B2PC09_GLYSO	3.6e-28	100.00	40S ribosomal protein S29 OS=Glycine soja GN=glysoja_020036 PE=4 SV=1	[more]
B9R720_RICCO	3.6e-28	100.00	40S ribosomal protein S29, putative OS=Ricinus communis GN=RCOM_1587780 PE=4 SV=...	[more]
A0A0A0L3R9_CUCSA	3.6e-28	100.00	40S ribosomal protein S29 OS=Cucumis sativus GN=Csa_4G642380 PE=4 SV=1	[more]
A9P9S8_POPTR	8.1e-28	96.43	Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1	[more]
V7BB27_PHAVU	1.4e-27	98.21	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G043800g PE=4 SV=1	[more]

BLAST of Cucsa.097460 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G43980.1	2.5e-28	92.86	Ribosomal protein S14p/S29e family protein	[more]
AT3G44010.1	2.5e-28	92.86	Ribosomal protein S14p/S29e family protein	[more]
AT4G33865.1	2.5e-28	92.86	Ribosomal protein S14p/S29e family protein	[more]

BLAST of Cucsa.097460 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|225442077\|ref\|XP_002271801.1\|	5.2e-28	100.00	PREDICTED: 40S ribosomal protein S29-like [Vitis vinifera]	[more]
gi\|747063168\|ref\|XP_011078121.1\|	6.8e-28	98.21	PREDICTED: 40S ribosomal protein S29 [Sesamum indicum]	[more]
gi\|1009143052\|ref\|XP_015889056.1\|	8.9e-28	98.21	PREDICTED: 40S ribosomal protein S29-like [Ziziphus jujuba]	[more]
gi\|1009150100\|ref\|XP_015892836.1\|	8.9e-28	98.21	PREDICTED: 40S ribosomal protein S29 [Ziziphus jujuba]	[more]
gi\|1009150098\|ref\|XP_015892835.1\|	8.9e-28	98.21	PREDICTED: 40S ribosomal protein S29 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001209	Ribosomal_S14

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005634	nucleus
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.097460.1	Cucsa.097460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001209	Ribosomal protein S14	PFAM	PF00253	Ribosomal_S14	coord: 7..56 score: 2.7
None	No IPR available	GENE3D	G3DSA:4.10.830.10		coord: 19..49 score: 1.
None	No IPR available	PANTHER	PTHR12010	40S RIBOSOMAL PROTEIN S29	coord: 1..56 score: 6.2
None	No IPR available	PANTHER	PTHR12010:SF6	40S RIBOSOMAL PROTEIN S29	coord: 1..56 score: 6.2
None	No IPR available	unknown	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 13..49 score: 4.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.097460	Csa4G000930	Cucumber (Chinese Long) v2	cgycuB102
Cucsa.097460	MELO3C017993	Melon (DHL92) v3.5.1	cgymeB111
Cucsa.097460	CSPI04G00470	Wild cucumber (PI 183967)	cgycpiB103
Cucsa.097460	CmaCh16G003270	Cucurbita maxima (Rimu)	cgycmaB0197
Cucsa.097460	CmaCh04G004540	Cucurbita maxima (Rimu)	cgycmaB0204
Cucsa.097460	CmoCh04G004860	Cucurbita moschata (Rifu)	cgycmoB0198
Cucsa.097460	CmoCh16G003450	Cucurbita moschata (Rifu)	cgycmoB0190
Cucsa.097460	MELO3C017993.2	Melon (DHL92) v3.6.1	cgymedB109
Cucsa.097460	CsaV3_4G000420	Cucumber (Chinese Long) v3	cgycucB102
Cucsa.097460	Cla97C10G193430	Watermelon (97103) v2	cgywmbB108
Cucsa.097460	Carg19680	Silver-seed gourd	carcgyB0343
Cucsa.097460	Carg08125	Silver-seed gourd	carcgyB0432

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.097460	Watermelon (Charleston Gray)	cgywcgB113
Cucsa.097460	Watermelon (97103) v1	cgywmB115
Cucsa.097460	Cucurbita pepo (Zucchini)	cgycpeB0192
Cucsa.097460	Cucurbita pepo (Zucchini)	cgycpeB0188
Cucsa.097460	Bottle gourd (USVL1VR-Ls)	cgylsiB111
Cucsa.097460	Wax gourd	cgywgoB125