CsaV3_4G000420 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGACACTCGAACGTTTGGAACTCTCATCCTAAGAACTATGGACCTGGTTCTCGCACTTGGTAAGCAAATATCTTCTCACTCATCTACTTTTTATTGGTGGAACATGAATCTCGAACACAATGTTTCCTTTTTTTTTTTTTTGTGTCTAGTTTATTTCAACGACTTGAGAGTTCATCAACTGATTAGCTCATATTAACTTTGCGCGCTTCGTAATGGGACCTGAAGAATATTGTTTGATTGAAGATTTATTTATTATGTATTACTTTTCTTGTTTTGATAGATAACCAGATACCTACGTTTCAGTTCGATTTTTAATATTTTAACATGGCTTTAAGTTTAATCTGTTGTTCTAAAGGTTTTTCCAACTTGGATTCGATTTTGTGATGCTTAAAAGTTTGTGTTGACTTTTGGGGTTTCTGTTATCGCGTTGTAAAAGGCTTCGCTAATTGCAGAAGATTTATAATTTGAACCCGGATTTACATATCGATCGATTATGTCATGGTTTTGTTAAGGCGGATGAAAGGTTATAGCTGATGTTATGTGATGTATGGGATCTGTAGTAGGCGAGAAAATCTTTATACTTTATGCGTATTTTATCCTTCTCTCCTTTAATCCGAATGAATCACTTTGCTTGGTTGAGTTTTTTTAGTTCCTACGTCTATTAGATCAATTTTTGTCGGTTACCCAGAAGTTATTGAGTCTACCTAAGAGTAATGGAACACATTTTTATCCTTAATGGATCTCTTAGGCTTCATTCGGTAGCCTTTTTGTTTTTGGTTTTTGGATTTTGCAAATTAAGCAGATTTCCTCCCACTTTTGCTTACCTTGGTGTGGAAAATAGTTGAATATTTAGCCAAATTTTTAGTAACTATTTTTTTTTTTGGTTTTCAAATTTTGGCTTGGTTTTTTAAATCATTGGTTAAAAGTAAATAACATAACAAGAAATTTAAATTTGAAGTAGTGTTTGTAGGCTCAATTTTTTTTTTTTTTAAAAAAAGACCTAATGGCTAGGAAATGAGGCCTTGGTGGTTAAAGGTTGTCTATAGTATTTGTTGACTTTTGAGAAAGCTGAAATTCAATAGCTCCTTTCTTTGAATCCTCTTCTCAGTCGTGTGTGCGGAAATCCCCATGGGTTGATCAGGAAGTATGGACTTATGTGTTGCAGACAATGCTTCCGCAGCAATGCCAAGGAAATTGGTTTCATCAAGGCAAGTTAA ATGGGACACTCGAACGTTTGGAACTCTCATCCTAAGAACTATGGACCTGGTTCTCGCACTTGTCGTGTGTGCGGAAATCCCCATGGGTTGATCAGGAAGTATGGACTTATGTGTTGCAGACAATGCTTCCGCAGCAATGCCAAGGAAATTGGTTTCATCAAGGCAAGTTAA ATGGGACACTCGAACGTTTGGAACTCTCATCCTAAGAACTATGGACCTGGTTCTCGCACTTGTCGTGTGTGCGGAAATCCCCATGGGTTGATCAGGAAGTATGGACTTATGTGTTGCAGACAATGCTTCCGCAGCAATGCCAAGGAAATTGGTTTCATCAAGGCAAGTTAA MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKAS
BLAST of CsaV3_4G000420 vs. NCBI nr
Match: KGN52774.1 (hypothetical protein Csa_4G000930 [Cucumis sativus]) HSP 1 Score: 131.0 bits (328), Expect = 1.3e-27 Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of CsaV3_4G000420 vs. NCBI nr
Match: KDP41637.1 (hypothetical protein JCGZ_16044 [Jatropha curcas]) HSP 1 Score: 129.4 bits (324), Expect = 3.9e-27 Identity = 55/56 (98.21%), Postives = 55/56 (98.21%), Query Frame = 0
BLAST of CsaV3_4G000420 vs. NCBI nr
Match: BAU00845.1 (hypothetical protein VIGAN_10248000 [Vigna angularis var. angularis]) HSP 1 Score: 128.3 bits (321), Expect = 8.6e-27 Identity = 54/56 (96.43%), Postives = 55/56 (98.21%), Query Frame = 0
BLAST of CsaV3_4G000420 vs. NCBI nr
Match: CBI27789.3 (unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 127.5 bits (319), Expect = 1.5e-26 Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0
BLAST of CsaV3_4G000420 vs. NCBI nr
Match: KGN43857.1 (hypothetical protein Csa_7G071460 [Cucumis sativus]) HSP 1 Score: 127.5 bits (319), Expect = 1.5e-26 Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0
BLAST of CsaV3_4G000420 vs. TAIR10
Match: AT3G43980.1 (Ribosomal protein S14p/S29e family protein) HSP 1 Score: 117.1 bits (292), Expect = 3.6e-27 Identity = 50/54 (92.59%), Postives = 50/54 (92.59%), Query Frame = 0
BLAST of CsaV3_4G000420 vs. TAIR10
Match: AT3G44010.1 (Ribosomal protein S14p/S29e family protein) HSP 1 Score: 117.1 bits (292), Expect = 3.6e-27 Identity = 50/54 (92.59%), Postives = 50/54 (92.59%), Query Frame = 0
BLAST of CsaV3_4G000420 vs. TAIR10
Match: AT4G33865.1 (Ribosomal protein S14p/S29e family protein) HSP 1 Score: 117.1 bits (292), Expect = 3.6e-27 Identity = 50/54 (92.59%), Postives = 50/54 (92.59%), Query Frame = 0
BLAST of CsaV3_4G000420 vs. Swiss-Prot
Match: sp|Q680P8|RS29_ARATH (40S ribosomal protein S29 OS=Arabidopsis thaliana OX=3702 GN=RPS29A PE=3 SV=2) HSP 1 Score: 117.1 bits (292), Expect = 6.5e-26 Identity = 50/54 (92.59%), Postives = 50/54 (92.59%), Query Frame = 0
BLAST of CsaV3_4G000420 vs. Swiss-Prot
Match: sp|Q5I7K3|RS29_WHEAT (40S ribosomal protein S29 OS=Triticum aestivum OX=4565 GN=RPS29 PE=1 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 1.1e-25 Identity = 49/54 (90.74%), Postives = 51/54 (94.44%), Query Frame = 0
BLAST of CsaV3_4G000420 vs. Swiss-Prot
Match: sp|Q7XYB0|RS29_GRIJA (40S ribosomal protein S29 OS=Griffithsia japonica OX=83288 GN=RPS29 PE=3 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 4.5e-19 Identity = 37/54 (68.52%), Postives = 44/54 (81.48%), Query Frame = 0
BLAST of CsaV3_4G000420 vs. Swiss-Prot
Match: sp|Q4PM47|RS29_IXOSC (40S ribosomal protein S29 OS=Ixodes scapularis OX=6945 GN=RpS29 PE=3 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 2.9e-18 Identity = 38/54 (70.37%), Postives = 42/54 (77.78%), Query Frame = 0
BLAST of CsaV3_4G000420 vs. Swiss-Prot
Match: sp|Q6F473|RS29_PLUXY (40S ribosomal protein S29 OS=Plutella xylostella OX=51655 GN=RpS29 PE=3 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 6.5e-18 Identity = 37/54 (68.52%), Postives = 42/54 (77.78%), Query Frame = 0
BLAST of CsaV3_4G000420 vs. TrEMBL
Match: tr|A0A0A0KV31|A0A0A0KV31_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000930 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 8.8e-28 Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of CsaV3_4G000420 vs. TrEMBL
Match: tr|F6HXU9|F6HXU9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_09s0002g00970 PE=3 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 2.5e-27 Identity = 55/56 (98.21%), Postives = 55/56 (98.21%), Query Frame = 0
BLAST of CsaV3_4G000420 vs. TrEMBL
Match: tr|A0A067KZM9|A0A067KZM9_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16044 PE=3 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 2.5e-27 Identity = 55/56 (98.21%), Postives = 55/56 (98.21%), Query Frame = 0
BLAST of CsaV3_4G000420 vs. TrEMBL
Match: tr|A0A0S3T7T0|A0A0S3T7T0_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.10G248000 PE=3 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 5.7e-27 Identity = 54/56 (96.43%), Postives = 55/56 (98.21%), Query Frame = 0
BLAST of CsaV3_4G000420 vs. TrEMBL
Match: tr|A0A2P5BZY0|A0A2P5BZY0_9ROSA (Ribosomal protein OS=Trema orientalis OX=63057 GN=TorRG33x02_136200 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 9.7e-27 Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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