Cucsa.087920 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCCcGAAACAAAACCAAAATCTCTGGCTATGGAACTTCCGACTTCCTTCTTCTTCAACTTCTTTCCGATTCCGTCATCTTTGCTGTTCGATTAACGCTTCGTCTTCCACATTAGGGTTTTTAGCTATTTCATTTCTCCACTAATTCCATGCGACCCAACTGTTTCTCTTGAATTCCAACACAATGAGCGCGGTTAATATCACCAACGTTGCAGTTCTTGACAACCCATCTCCCTTCTCTACTCCCCTTCAGTTTGAGATCTCCTACGAGTGTTTGTCTGCTCTCAAATACGGTATTTCTTCCATCTATGCTTTTTTCGCTTTTTATTTCTTACATGTGTTCAATCATGATTGTACTGTTTGAATTGCATTCTATTAGGGTTTACTTTTTACGATTTGATCTTTCGGAGTTTTTCCTTCCATAATTGACTGTGATTTTTAAATGCATGGTTGTAAAAGTTCAACTGATGATAGATAGTTTTGTTGATGGTTATGCGGTTGGGGAACTTACGAAGAAGTTCGTTGTAGGGAGAGCGCCTTCATATCGAGGACCTATTGGTTTTTGCCTTCGATTTTGCGTAACTGAATATAAGATTTCAGTATTGCTTCATGGCCTGAGGCATTTCTGCTTACAGCAGCCGAATTACTCGATTGAACGAAGAATGTTCTTTGATTGTAAAATACAGTGTAAGATACTAAGAGGTCGTATCTGAGTTAAACAGTTTGGGGTATGAAATTATACCTTTGGTCTTTAGATCAGTAATGAATTGTATTTATACCTTTCAGTTTTTTCTTTCCACTTATTCTCTATGATTTTCTAAGATGTTTAGGATGTTATGTTTTTGTTACATCTTCATGGGCGCTCTAGATTTTGTTTTCTTTTTTAACAGAAACAACTTTAATTAAGAAAAAAAATGAAAGAATACAAGGGCATAACAAACCCAACAAGAAACCTCCCACTAAAGGAAGGGGATACAAGTAAAAGATATATTTCCCAGTGGATAGTTATAGAAAAGCTTCGAAAATGAAGCCCAAAGGAGCACATGAAATCTCACCAAAGACCAAACCTCACAAGGGTCCCTATCCTTCCTTCTAAGGACTCTATCATTTCTCTCCCCCAAATATCCcAAATGAAAATAAGGTTCAAAGTTGTTCTGTATTTTCTATATTAAAATGGAGAGACCTTAGGTCAATTTATATACAGGAACCGTAATTTAGGGCAAGTAAAAATAAGAAAAAAATAGAAAACAACATGGCACAACACAATATTACACGAGAACAAACTTTCAACCAAATAATGCTTTTGGAATAATTGAGCTGGAATATCTTCTGCTAAGTTGATTGTATTGAATGACATACTTGGACTGAGCTCGCCTGGGTGTGGAGTTTTCCTCTAGCTGACTCACTTCCTTAACTGTACACCCCCCAACAAGCCACAAAAACAGCCTTTCACTTTGAAAGGCGTATGGAGACAGAACTCCTCGATTATTGCTCGAACATCTCTGACCAACAATGCTAACATTGAACTTCTACAAGAACAAACTCCACATCGTCCTCACATACTGGCCGCCCCAAAAGAGATGATTTAGGTCTTCTCTGCCTTCTGACAAAGAATGCAGCAAAAAGGCCCCACAAGCGAAGTTTTTCTTCTAACAAGCCTATCACAAGTGTTTACACGACCAAGCAAGACTTGCTAGATAAAAAaCCTGATTTTCTTAGGAATCTTAATCCTTCAAATGGTATCAAACATGGTCTTCCCGGTGGGAGAGGGGTCTAATAACAATTTGAAGAAGGATTTACAAGAAAATCCCTCCCTAGGAGTCGGACTCCAAATACGAACATCCCTCCTCCCCTCCCTAAAAGTGCACGCCTCCAATAAAGAAAGCAAAGAGGCAACCTTCGCCTTTTTCGTATTGGaCAAATTGTGACGGAACCTAAAGGAAAAaGACACAGTTCTCAAACCAAATCAAGAAGTTAGAGAATAGATGATTTTTAGGGGAAGAAAGGTGATAAATATAAGGAAGGACAGAACAAAGAGCGCTCCAGACTATATCATTCTACCGGGTTGTGGCTAGTGAGAGgGGGGATGTAATATGTCTAGAACTGGATCTGTGGTTTCGGCAAAATGGCTAGTTAACTCAGTTGACATTCGTTTTGTCTTTGACTTTTAGGTGAGTATTTTATAGTCATCTTGGTCCAAGTTTTACCTGTGAGATTGCAAATTTTTCTGCATGCTTTCTGAATATGAGCCTGGGATACATATGGAAATGTATGACCTTGTTCTTGATGTTGTATTACATATTATTCATTGTGCCAAATGATTGTCATATCAAGATTCTTAATGTTTTCCTGCTGTATTTATTATTACTCCATCTAGGTAAGTAATCGATGTTGTTGGCCCTATATGTGTTGATGGATATTATACTGCTAGTTTTCAATTTATTGAATCTGTAGCGGGCTCATGGATGTGAACAGAATATTTATCTTAGTTTGTTTATGTATCTTTGTCAGCTGAGATTACTCTATAAGCGTATTGAGCAAAGATTTTTGACATTTACAGATTATGATTAATTTTTTGTGATGATGACAACATTAAATAGGCTGTAGTGGCTTAATTAGGGTATCAAGTTAAAAGTTTATTCTGATAGAGGTTTATGACGAATTTTTAAACGTTGTTGGATGACATGGTTTTGAACTTTTGATGTTTGTTATTGAAAGGGCACCATTGTAGTTCTTCAACATTTTACTTTGTGTCCAACTTTAGAATTTCTCAGAAGAGACTATGTTCTTTCTTTAGTCCATACTCCTGCGGAAGGTCTATATTTTATTACGCTGTTTGAGGTATTTATGTTGGTATATGTGTAAAGGACATACTTATGTAGTTTAGTACTTAGGTGGTATATGTAAATAGGAAGGCAGGGAACAGAATCTGAATTACTCTGTCTGATTTATGGATTAGGCTTTAGGTCATTGAATCATTCCCTTTTTTtATTTGGACCAACGGATACTCTGTTTATAAAAGGCTTCAATGAATGATGTCTTGAAGATGTTCTTACAGAAATTCAGCTTTTtTTTtAATAAAAAAAAAaTCATTTATTTTTtAGGAACCTGTTAGAAACACAAGTTGTATGTTACATGAAAGGAGTGCATTTAGGCAAAGCCAACTAGTATATTTAGGCCATATCATCTTAGAACAGTGGGTCCAGACTGACCAAAAGAATGTCCAGTCAATGTCGGATTGATAAACACCCAACGTCTTCTTTAATCGAGGAGCATAAAGTTCTCCTTGATCTTCTCATGGGTTACTCCAGTAAAACTTGTGGCTAGGTATTGTTCTTTAGCACGCCCATTTGAACAGTAACTAGAGATGCAGTGCCGTATTTGCTTTCAATTAGCTCAAGTTGGCCATCATAGAAGTACCCACGTCAGTTTTCTGTATTTCTTAAAGCAGTTTGTATTTGAATGAATGCGTCTAGCTATGGTTTGATCGCTGTGTCGTATAGTTTTGGTTTTGTTATTTCCAAAGCAGCCAAGGAGGAGCTCTTCAAGCATTGTCCACTAAATTCTAGTTTATCTTTAAAATACCCTTCAGATAGGAATTCTGAAGCATTTTCTTCCACCCTTTTTGGTAGTACCCTGTGGTAAAATTGCACTGCCAAAAAAAAaGATTATGAAATTCATCTCTATGTCTGCAAATTTAAGAAATTGGAAGACGGGGGTTACTTGATGGAACTATGCCTCAAGTGTTTAAGATGTGTGCAGGGTTCTAGATAAAGAATTTGGTTCTTTTTGGACCTTGGTGTCCTTGCCTCTTCTAAACTAGGTTACAGTTACCCAGATTTAAGACACTAGAGCTGAATTCAGAACTCTGTTAGCTGAAAATAACCCTAAATGTCCAGGAAATTCCAATGTATGCTATCACTGGCTTGGTTTGATCTGGCCTCTTGTACCAAAAAaGTAAGCCTTATTGCCCATTCTTCTCTCTATCTCTGCGACCTTATCTCAGCAGGCTGCTGTGTGGATTAGCTCTTGGTGGAATAAAATGCAGTTTTGGATTGTTAGAATTGAATTGGCTAAGAGGCAGAGCACAAATGATACAGTTCACTAATTTCCCTCTTAAAGACGTGGAATTTGCTATGGGTGTCTTGGTTCATTGAAACTTCAGCCATTCATTCTACAGTTTGTATTAGGGTGCAGCGTGCAGATATGAAAAATTTACTTCTTGCTGTTGTGGTCCACTTCGCATCATCCGAAGAAGTGGGTACAATTGCTACAGATTGGAGTTGGGACACAACGGAAGCCTTTGGATAGGGACAAATAAAGCTCTTATTGATATTCTTGCTGTGTATAGTGTTGGTAGTGTATGGATCTGGTGCACTTTCCAAGAGACTTCGCCTCCTTAATGAGGCACATGCCTTGGCCTTTTTtATTTTtCCCTTGATAGGGGGTAAATAAGGCTCTTCTTCATATTTTGCCCTATGATTTTGGTAATGTATGGATCTGGTGCAGTTTCCAAGAAGCAAGGGTTCATTACTCACTTGTGTACCTCAGCCTTTTTTCTTTGTTCGTTTTTtATGATAAATATTCGCAAAGTCAATTGTTCTTGTAAACAACTCTTACAATAGCTCTAATTTCCTCATTTTATTATTCATGTTACTATATCGTTTTCGATTGTATTGTCCCGAAGAACATAGATTATATTGTATCGTGCATATTTCTTGTAGAAGCATCAAGTTTTTTCTATCGCACCACCGAGAAGCATGCGTATATCTAATTGATAATTCGAAAGGTTGTTTAACTTTGTTATTTAGAAGGAAATTTGAGGGAAAGTAGGGAGTATTTTTAAAGATGATGAGCACTTGGCAGTTAGTTCATAAAGAATGTTTTTCTTATTGGAACTTCTATTTTATTAGATTAAAAATATATCCTACACAGTGGAAGAAACTCTACCTGTTTTTACTTTCTTAGATGTCTAGCGCTCAATTGCATTGATCTACCATTGCACCTATATTAGTACCTTGTTGACTGAACGTTTCTACTGTTTTCTCATCCTGTTTCAGATTTGGAATGGAAACTAATTTACGTGGGATCTGCTGAGGTTGAGACATATGATCAACTATTGGAGTGTGTTCTTGTGGGACCTGTCAATGTCGGTAACTATCGTTTTGTATTGCAGGTAAAAGTTCCATGACAAATTTCTGTATTCGGTTATCATACATTATCTTGTTCATGGAGTTAACCTTGTCATCTCTCCCAGGCTGACCCTCCAGACCCGTCCAAAATCCCTGAAGAAGATATCATTGGTGTAACTGTACTTCTGTTGACCTGCTCGTATATGGGGCAGGAGTTCATCCGTGTTGGTTACTATGTAAACAATGATTACGATGATGAGCAGCTCAGAGAAGAACCTCCAGCCAAAGTCTTGATCGATAGGGTTCAGAGAAACATCCTATCTGATAAACCCAGGGTTACAAAGTTTCCCATTAATTTCTACCCTGAGACTAATGATAGTGGAGAGGAACCTCCTTCTAACGATCCGGTATCAGCCGAAACCGACGGTGACGAACAACTACCTGCATCTCCTGAACATCCTTCAAATGATCAAAATCCCTAGATTTTGGAACTTCCTGCCAAACACCAAGTCGTGGCCACTTGTTGTAAGAGATCATCATGGGTGGAGTCTTGAATGGGTTTTGGGTTCAAAAGTTGAGACATCTTTTGAGAATATGATGGTTGGAATGCAGTGTTCAACTTCAGTTGCTGAATTTGCAACGCAGTTGGTTGCATGTTGGTTTGTAGTTGTACAAAGATAGTGCAAATTCATTGTTTTGAAGGCCTTGTTTGATATCTAAAAAACTTTTGGTCTATAAATCTACAATGCTATTTTACTTCTGATCTTAAAGTTACTGCATGGGTCAGCCATCTGCAGTACGTGCAACTTGCAAGCCTTTTAACATTTTTTTTTttCTCTAAAGAAAGATAGAGAGA CCCCCGAAACAAAACCAAAATCTCTGGCTATGGAACTTCCGACTTCCTTCTTCTTCAACTTCTTTCCGATTCCGTCATCTTTGCTGTTCGATTAACGCTTCGTCTTCCACATTAGGGTTTTTAGCTATTTCATTTCTCCACTAATTCCATGCGACCCAACTGTTTCTCTTGAATTCCAACACAATGAGCGCGGTTAATATCACCAACGTTGCAGTTCTTGACAACCCATCTCCCTTCTCTACTCCCCTTCAGTTTGAGATCTCCTACGAGTGTTTGTCTGCTCTCAAATACGATTTGGAATGGAAACTAATTTACGTGGGATCTGCTGAGGTTGAGACATATGATCAACTATTGGAGTGTGTTCTTGTGGGACCTGTCAATGTCGGTAACTATCGTTTTGTATTGCAGGCTGACCCTCCAGACCCGTCCAAAATCCCTGAAGAAGATATCATTGGTGTAACTGTACTTCTGTTGACCTGCTCGTATATGGGGCAGGAGTTCATCCGTGTTGGTTACTATGTAAACAATGATTACGATGATGAGCAGCTCAGAGAAGAACCTCCAGCCAAAGTCTTGATCGATAGGGTTCAGAGAAACATCCTATCTGATAAACCCAGGGTTACAAAGTTTCCCATTAATTTCTACCCTGAGACTAATGATAGTGGAGAGGAACCTCCTTCTAACGATCCGGTATCAGCCGAAACCGACGGTGACGAACAACTACCTGCATCTCCTGAACATCCTTCAAATGATCAAAATCCCTAGATTTTGGAACTTCCTGCCAAACACCAAGTCGTGGCCACTTGTTGTAAGAGATCATCATGGGTGGAGTCTTGAATGGGTTTTGGGTTCAAAAGTTGAGACATCTTTTGAGAATATGATGGTTGGAATGCAGTGTTCAACTTCAGTTGCTGAATTTGCAACGCAGTTGGTTGCATGTTGGTTTGTAGTTGTACAAAGATAGTGCAAATTCATTGTTTTGAAGGCCTTGTTTGATATCTAAAAAACTTTTGGTCTATAAATCTACAATGCTATTTTACTTCTGATCTTAAAGTTACTGCATGGGTCAGCCATCTGCAGTACGTGCAACTTGCAAGCcttttaacatttttttttttctctaaagaaagatagagaga ATGAGCGCGGTTAATATCACCAACGTTGCAGTTCTTGACAACCCATCTCCCTTCTCTACTCCCCTTCAGTTTGAGATCTCCTACGAGTGTTTGTCTGCTCTCAAATACGATTTGGAATGGAAACTAATTTACGTGGGATCTGCTGAGGTTGAGACATATGATCAACTATTGGAGTGTGTTCTTGTGGGACCTGTCAATGTCGGTAACTATCGTTTTGTATTGCAGGCTGACCCTCCAGACCCGTCCAAAATCCCTGAAGAAGATATCATTGGTGTAACTGTACTTCTGTTGACCTGCTCGTATATGGGGCAGGAGTTCATCCGTGTTGGTTACTATGTAAACAATGATTACGATGATGAGCAGCTCAGAGAAGAACCTCCAGCCAAAGTCTTGATCGATAGGGTTCAGAGAAACATCCTATCTGATAAACCCAGGGTTACAAAGTTTCCCATTAATTTCTACCCTGAGACTAATGATAGTGGAGAGGAACCTCCTTCTAACGATCCGGTATCAGCCGAAACCGACGGTGACGAACAACTACCTGCATCTCCTGAACATCCTTCAAATGATCAAAATCCCTAG MSAVNITNVAVLDNPSPFSTPLQFEISYECLSALKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCSYMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETDGDEQLPASPEHPSNDQNP*
BLAST of Cucsa.087920 vs. Swiss-Prot
Match: ASF1A_ARATH (Probable histone chaperone ASF1A OS=Arabidopsis thaliana GN=ASF1A PE=2 SV=1) HSP 1 Score: 285.0 bits (728), Expect = 6.0e-76 Identity = 143/196 (72.96%), Postives = 161/196 (82.14%), Query Frame = 1
BLAST of Cucsa.087920 vs. Swiss-Prot
Match: ASF1B_ARATH (Histone chaperone ASF1B OS=Arabidopsis thaliana GN=ASF1B PE=1 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 2.3e-75 Identity = 143/192 (74.48%), Postives = 159/192 (82.81%), Query Frame = 1
BLAST of Cucsa.087920 vs. Swiss-Prot
Match: ASF1_DROME (Histone chaperone asf1 OS=Drosophila melanogaster GN=asf1 PE=1 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 2.4e-56 Identity = 105/195 (53.85%), Postives = 139/195 (71.28%), Query Frame = 1
BLAST of Cucsa.087920 vs. Swiss-Prot
Match: ASF1A_BOVIN (Histone chaperone ASF1A OS=Bos taurus GN=ASF1A PE=2 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 4.2e-53 Identity = 101/192 (52.60%), Postives = 134/192 (69.79%), Query Frame = 1
BLAST of Cucsa.087920 vs. Swiss-Prot
Match: ASF1A_HUMAN (Histone chaperone ASF1A OS=Homo sapiens GN=ASF1A PE=1 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 4.2e-53 Identity = 101/192 (52.60%), Postives = 134/192 (69.79%), Query Frame = 1
BLAST of Cucsa.087920 vs. TrEMBL
Match: A0A0A0LMW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G404990 PE=4 SV=1) HSP 1 Score: 398.3 bits (1022), Expect = 5.4e-108 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 1
BLAST of Cucsa.087920 vs. TrEMBL
Match: U5GIA8_POPTR (ASF1-like anti-silencing family protein OS=Populus trichocarpa GN=POPTR_0005s14990g PE=4 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 2.5e-84 Identity = 157/194 (80.93%), Postives = 172/194 (88.66%), Query Frame = 1
BLAST of Cucsa.087920 vs. TrEMBL
Match: A0A067FNL9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029646mg PE=4 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 3.5e-83 Identity = 154/191 (80.63%), Postives = 168/191 (87.96%), Query Frame = 1
BLAST of Cucsa.087920 vs. TrEMBL
Match: V4W628_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016840mg PE=4 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 3.5e-83 Identity = 154/191 (80.63%), Postives = 168/191 (87.96%), Query Frame = 1
BLAST of Cucsa.087920 vs. TrEMBL
Match: A0A061EHD2_THECC (Histone chaperone ASF1A OS=Theobroma cacao GN=TCM_019326 PE=4 SV=1) HSP 1 Score: 314.7 bits (805), Expect = 7.9e-83 Identity = 155/193 (80.31%), Postives = 167/193 (86.53%), Query Frame = 1
BLAST of Cucsa.087920 vs. TAIR10
Match: AT1G66740.1 (AT1G66740.1 ASF1 like histone chaperone) HSP 1 Score: 285.0 bits (728), Expect = 3.4e-77 Identity = 143/196 (72.96%), Postives = 161/196 (82.14%), Query Frame = 1
BLAST of Cucsa.087920 vs. TAIR10
Match: AT5G38110.1 (AT5G38110.1 anti- silencing function 1b) HSP 1 Score: 283.1 bits (723), Expect = 1.3e-76 Identity = 143/192 (74.48%), Postives = 159/192 (82.81%), Query Frame = 1
BLAST of Cucsa.087920 vs. NCBI nr
Match: gi|449441716|ref|XP_004138628.1| (PREDICTED: probable histone chaperone ASF1A [Cucumis sativus]) HSP 1 Score: 398.3 bits (1022), Expect = 7.8e-108 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 1
BLAST of Cucsa.087920 vs. NCBI nr
Match: gi|659081380|ref|XP_008441304.1| (PREDICTED: probable histone chaperone ASF1A [Cucumis melo]) HSP 1 Score: 394.4 bits (1012), Expect = 1.1e-106 Identity = 192/193 (99.48%), Postives = 192/193 (99.48%), Query Frame = 1
BLAST of Cucsa.087920 vs. NCBI nr
Match: gi|566171447|ref|XP_006383375.1| (ASF1-like anti-silencing family protein [Populus trichocarpa]) HSP 1 Score: 319.7 bits (818), Expect = 3.5e-84 Identity = 157/194 (80.93%), Postives = 172/194 (88.66%), Query Frame = 1
BLAST of Cucsa.087920 vs. NCBI nr
Match: gi|743821085|ref|XP_011021322.1| (PREDICTED: histone chaperone ASF1B [Populus euphratica]) HSP 1 Score: 318.5 bits (815), Expect = 7.8e-84 Identity = 156/194 (80.41%), Postives = 172/194 (88.66%), Query Frame = 1
BLAST of Cucsa.087920 vs. NCBI nr
Match: gi|567912021|ref|XP_006448324.1| (hypothetical protein CICLE_v10016840mg [Citrus clementina]) HSP 1 Score: 315.8 bits (808), Expect = 5.1e-83 Identity = 154/191 (80.63%), Postives = 168/191 (87.96%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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