CmoCh04G031050 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G031050
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	ASF1 like histone chaperone
Location	Cmo_Chr04 : 21592313 .. 21595891 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGCCTGAAATTCGACGTCAACTCTGCTCGCCAAACGCCACCACAGCTGACCGATGATGTTCGTGCCCTATCGACTCCCGCCAAATCCCGCTACCGGTTATCGCCGGTGACCGCTCCACATTTCCGGTATTCTTCCCCTTTTTCTCGAACAAACAAAAACTCAGACCCAAAACTCTTATTCTCGAACAAAAAACAGTAAACAAAGATCTCTCTTCGTTGGTTACTTCCAGACTTCCTTCTTCTTCAACCTCTTTCCGATTCCATCATTTTCGGAGTTCGATTCACGCATCGAATTGGACGAGTAGAGTCTTGAGCTATTTCATTTCTCCGCTAATTCCATGCGAGCTGTCTGTTTCTGTCGAAATCAACGACAATGAGCGCTGTGAATATCACTAACGTTGCAGTTCTCGACAACCCATCGCCCTTCTCTACCCCTCTTCAGTTTGAGATCTCCTACGAGTGTTTGTCTCCTCTCAAATACGGTATTCCCTCGATCTACTTTTTGTCGCTTTTTATTTTCTCTGTGTTCAATCATTATTTCCCTTTCAATACTATTTCTATTAAGTTTCTATTAGGGTTTACTTTCTAGGTTTAAATCTGTTTCGAACTTCTTGTATAATTGACTGTGAATGCAAGCTGGTAAAAATTGAACTTACAAACGAGTTTGTGGTTGCTAAACTGAATATAAATTTTTCAATGTTGCGTCATGTGTCCAAGGAATTTCTACTTACAGCGGACGAATTACTTGATGGAATGAAAAATGTGGTTTGATTGGAGAAGGCAGTTCAAGAGATCATTTATGAGAGAATATGGCGTTAAAAAATTTGGGTTATGAAATTGTTCCTCGGTTTTTAGATCGACAATGAATAACATTCTCCTAATCTCTCTATTCGATTTGTCTAAGATGTTTGGGGTATTGTAGTTTTTGTTACCTCCTTATGGGAGCTCTAGTTTATACCATTTGGTGCAAACTATAAATGTTCTGGGACTGAATACTTGATATCGGCAAAATGGCTACTTAGCTTAGTTGACCTTCTTTTGGATGAGAGTGTCTTATTGTCGTCACCGTTCAAGTTTTTACTAACTTGTACCTGTAAGGTTGCAAAATTCTCAGCATACTTTCTGAACCTGTACCTGGAAATACATTTGGAAAGTGTAGGACCCTTGTTTTGTATGTTGTATTGTATATTATTCAGTATTCCATTGATTATCATATCAAGATTCGTAATGTTTTCCCTCTGCATTCGGTGCCACACCATGTAAGATTGAAGATAGGTAATTGACGTTGTTAGCCCGATATACGTTGATGGATAGGATATTGCAAAATTTTAACTTATTGCATCTGTAGCGGAGTAATGGATGTCAGCCGAATATTTACCTGAGTTTATTTATATATCTTGGTCAAGGGGATTTTTGTATTAGCATACCCAACAAATAATTTTGGCATATCCGGAGTATGATTAACTTTTGTGATGCTAGCAAAATTAGATATGCTGCAGTTGCTTTCTTGGTTTCAATTTAAAAAATTATTTTGATAGAGGTTTATGATGAAACATAAAAAGTAATTGTTTGATGTGAATATGGTTTTGATATTGGATATTTAAAGGGCACCATTTTAGTTCTCCAACTTTTTACTTCATGTTGATCTCTAGATATCTCAGAAGAGACTGTGTCCTTTGTTTAGTCTATACTCCAGCAGCAAGGTCTATAATTGATTAGGCTTTTTGAGGTACTCGTGGTATATGTTTAAGAAAATTCTTGATGGTTGTAGTATAGAACTTAGGTGGTAGGTGTTGACGGGAAGGCAGGAAACTGAATCACAATCACTTTATGTGGTATGATATGGAATAATGACTGAAGGTCAATGAAATCAATTACATTTTTTGCTTTGACCAACCCACACTCTGTTTTTACGGCTTCAATGAATGATTTATTGAAGATGTTCTTACAGAAATTCAGATTTGCTTTTATTTTTAGGGTACCTGTTAAGAAACACAAGTTGTATACAGTATATTAAGTAAATGGAGAGAGCATTTATGCAAAGACAACCAATATATTTAGGACATATCATGTCAGACTAACAAAAAATAAAGTTCAGGCAATGTTTGATTGGTCAACACCCAATGCATGCTTCAATCCAGGAGCTTAAGGTTTTCCTTGCTAACAAGTTACTATTCGAAAGATTGTGGCTAGGTATAATTCTATAGCATGGCCATTAGAACAGGAACTAGATAGGGACTAGTTTAGATAGAATTACAGGGCCAAATTTTCTTTGAATCAAGCTCATGTTAGCCATGACATAAATACCAACATCAGTTTTGCAGGATTTCTTAGAAAAGTTTGTAATTGAAATGAATCCTACTAGACTCTAGTTACGGGTTGATGGTGTGTCAAATCCAACCTTGGAATATTTTTGAGTTTCTTTCTTTCTGAAGCAGCCAAAGATCTCTACAAGCTTCTCTACACAAAATTCTAGCTTTATTTTTTCATTATTGTATTATTTATAATTCCATATCTTTTTCTACCGTATCGTGTTGTATACCTCACAGTAAAAAGCCCCCGCTACATGTTTAAGCACCATATGACCTATTGCAATCGGAAGTAATTGTTTCCTAAAAAAAGGGAAAATTTGATTAAGCAAGAGCAACTAGATTCTATTATATGATGAGACGTGGATATTTCTTTAAGATGTGTGAATTTGCAGTTTTTTCTATGACACCTTCGAGAAAAGTATATCCAATTGATGACTGGAAACGTTCACTCTGTTATTTAGAAGGAAATTTGAGTGTAAGTATTTAGTTTATTCTTAAGTGTGATACGCACTTTAGTTTATAAAAAAAGTTAGTTTTATTATTGAACTCTGTACTTGGGTAAAAATTTATCATATTACGTGTGACACCTATTGCATTTTTTTAGAAGTCTAGTCAATCACATTGGTGATCATTGGACTTGCAGTAGTGCCCTTTTGACTGAATCTTTCTGTCCCGACTGTTTTCTCTTTCTGCTTCAGATTTGGAATGGAAGCTAATTTACGTAGGGTCTGCTGAGGTTGAGACTTATGATCAACTCTTGGAGTGTGTTCTTGTGGGTCCTGTCAATGTTGGCAATTATCGTTTTGTATTGCAGGTAAATTTCCTTGACCAATTTCTGTATTTTGTTAATACACCATCTTGTTTATAGAGATAACCTTGCTATCCCCTCCCATATGGATCATTCCCAGGCCGACCCTCCGGACCCATCCAAAATTCCTGAAGAAGATATCATTGGCGTAACTGTACTTCTGTTGACCTGCTCATATATGGGTCAGGAGTTTATCCGCGTTGGTTACTATGTAAACAATGATTATGATGACGAGCAGCTCAGAGAAGAACCTCCAACCAAAGTCTTGATCGATAGGGTTCAGAGAAACATTCTATCTGATAAACCCAGGGTTACAAAATTTCCCATTAATTTTTACCCTGAGACCAATGATAGTGGAGAGGAACCTCCTCCTAACGATCCTGTATTGGCTGAAACTGACGGTGACGATCAACTACCCGCTTCGCCTGAACATCCTTCGGACGAACAAATTCCTTAG

mRNA sequence

ATTTGCCTGAAATTCGACGTCAACTCTGCTCGCCAAACGCCACCACAGCTGACCGATGATGTTCGTGCCCTATCGACTCCCGCCAAATCCCGCTACCGGTTATCGCCGGTGACCGCTCCACATTTCCGACTTCCTTCTTCTTCAACCTCTTTCCGATTCCATCATTTTCGGAGTTCGATTCACGCATCGAATTGGACGAGTAGAGTCTTGAGCTATTTCATTTCTCCGCTAATTCCATGCGAGCTGTCTGTTTCTGTCGAAATCAACGACAATGAGCGCTGTGAATATCACTAACGTTGCAGTTCTCGACAACCCATCGCCCTTCTCTACCCCTCTTCAGTTTGAGATCTCCTACGAGTGTTTGTCTCCTCTCAAATACGATTTGGAATGGAAGCTAATTTACGTAGGGTCTGCTGAGGTTGAGACTTATGATCAACTCTTGGAGTGTGTTCTTGTGGGTCCTGTCAATGTTGGCAATTATCGTTTTGTATTGCAGGCCGACCCTCCGGACCCATCCAAAATTCCTGAAGAAGATATCATTGGCGTAACTGTACTTCTGTTGACCTGCTCATATATGGGTCAGGAGTTTATCCGCGTTGGTTACTATGTAAACAATGATTATGATGACGAGCAGCTCAGAGAAGAACCTCCAACCAAAGTCTTGATCGATAGGGTTCAGAGAAACATTCTATCTGATAAACCCAGGGTTACAAAATTTCCCATTAATTTTTACCCTGAGACCAATGATAGTGGAGAGGAACCTCCTCCTAACGATCCTGTATTGGCTGAAACTGACGGTGACGATCAACTACCCGCTTCGCCTGAACATCCTTCGGACGAACAAATTCCTTAG

Coding sequence (CDS)

ATGAGCGCTGTGAATATCACTAACGTTGCAGTTCTCGACAACCCATCGCCCTTCTCTACCCCTCTTCAGTTTGAGATCTCCTACGAGTGTTTGTCTCCTCTCAAATACGATTTGGAATGGAAGCTAATTTACGTAGGGTCTGCTGAGGTTGAGACTTATGATCAACTCTTGGAGTGTGTTCTTGTGGGTCCTGTCAATGTTGGCAATTATCGTTTTGTATTGCAGGCCGACCCTCCGGACCCATCCAAAATTCCTGAAGAAGATATCATTGGCGTAACTGTACTTCTGTTGACCTGCTCATATATGGGTCAGGAGTTTATCCGCGTTGGTTACTATGTAAACAATGATTATGATGACGAGCAGCTCAGAGAAGAACCTCCAACCAAAGTCTTGATCGATAGGGTTCAGAGAAACATTCTATCTGATAAACCCAGGGTTACAAAATTTCCCATTAATTTTTACCCTGAGACCAATGATAGTGGAGAGGAACCTCCTCCTAACGATCCTGTATTGGCTGAAACTGACGGTGACGATCAACTACCCGCTTCGCCTGAACATCCTTCGGACGAACAAATTCCTTAG

Homology

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BLAST of CmoCh04G031050 vs. Swiss-Prot
Match: ASF1B_ARATH (Histone chaperone ASF1B OS=Arabidopsis thaliana GN=ASF1B PE=1 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 3.9e-75
Identity = 145/192 (75.52%), Postives = 160/192 (83.33%), Query Frame = 1


Query: 1   MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECV 60
           MS++NITNV VLDNP+PF  P QFEISYECL+ LK DLEWKLIYVGSAE ETYDQ+LE V
Sbjct: 1   MSSINITNVTVLDNPAPFVNPFQFEISYECLTSLKDDLEWKLIYVGSAEDETYDQVLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQAD PDP KI EEDIIGVTVLLLTCSYM QEFIRVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADSPDPLKIREEDIIGVTVLLLTCSYMDQEFIRVGYYVNNDYDDE 120

Query: 121 QLREEPPTKVLIDRVQRNILSDKPRVTKFPINFYPETNDS-GEEPPPNDPVLAETDGDDQ 180
           QLREEPPTKVLID+VQRNIL+DKPRVTKFPINF+PE   + G+ P P +P  A++  + +
Sbjct: 121 QLREEPPTKVLIDKVQRNILTDKPRVTKFPINFHPENEQTLGDGPAPTEP-FADSVVNGE 180

Query: 181 LPASPEHPSDEQ 192
            P   E P   Q
Sbjct: 181 APVFLEQPQKLQ 191

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BLAST of CmoCh04G031050 vs. Swiss-Prot
Match: ASF1A_ARATH (Probable histone chaperone ASF1A OS=Arabidopsis thaliana GN=ASF1A PE=2 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.5e-74
Identity = 145/195 (74.36%), Postives = 160/195 (82.05%), Query Frame = 1


Query: 1   MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECV 60
           MSA+ ITNVAVL NP+PF +P QFEISYECL+ LK DLEWKLIYVGSAE ETYDQLLE V
Sbjct: 1   MSAIKITNVAVLHNPAPFVSPFQFEISYECLNSLKDDLEWKLIYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFV QADPPDPSKI EEDIIGVTVLLLTCSYMGQEF+RVGYYVNNDY+DE
Sbjct: 61  LVGPVNVGNYRFVFQADPPDPSKIQEEDIIGVTVLLLTCSYMGQEFLRVGYYVNNDYEDE 120

Query: 121 QLREEPPTKVLIDRVQRNILSDKPRVTKFPINFYPE---TNDSGEEPPPNDPVLAETDGD 180
           QL+EEPPTKVLID+VQRNILSDKPRVTKFPI+F+PE   T  +   P  +D      +G+
Sbjct: 121 QLKEEPPTKVLIDKVQRNILSDKPRVTKFPIDFHPEEEQTAATAAPPEQSDEQQPNVNGE 180

Query: 181 DQ-LPASPEHPSDEQ 192
            Q LP     P  E+
Sbjct: 181 AQVLPDQSVEPKPEE 195

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BLAST of CmoCh04G031050 vs. Swiss-Prot
Match: ASF1_DROME (Histone chaperone asf1 OS=Drosophila melanogaster GN=asf1 PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 5.8e-55
Identity = 106/193 (54.92%), Postives = 138/193 (71.50%), Query Frame = 1


Query: 1   MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECV 60
           M+ V+ITNV VLDNPS F  P QFE+++EC+  LK DLEWK+IYVGSAE E +DQ+L+ +
Sbjct: 1   MAKVHITNVVVLDNPSSFFNPFQFELTFECIEELKEDLEWKMIYVGSAESEEHDQVLDTI 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
            VGPV  G + FV QADPPD SKIPE D +GVT++LLTCSY GQEF+RVGYYVNNDY D 
Sbjct: 61  YVGPVPEGRHIFVFQADPPDVSKIPEPDAVGVTIVLLTCSYRGQEFVRVGYYVNNDYADP 120

Query: 121 QLREEPPTKVLIDRVQRNILSDKPRVTKFPINF---YPETNDSGEEPPPNDPVLAETDGD 180
           ++RE PPTK L +++ RNIL+ KPRVT+F IN+   +   N +G E    D +  +    
Sbjct: 121 EMRENPPTKPLFEKLTRNILASKPRVTRFKINWDYGHINGNGNGVENGHQDEMATDGPST 180

Query: 181 DQLPASPEHPSDE 191
            +  ++  HP D+
Sbjct: 181 SEAASAVIHPEDD 193

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BLAST of CmoCh04G031050 vs. Swiss-Prot
Match: ASF1A_BOVIN (Histone chaperone ASF1A OS=Bos taurus GN=ASF1A PE=2 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.9e-53
Identity = 102/177 (57.63%), Postives = 126/177 (71.19%), Query Frame = 1


Query: 1   MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECV 60
           M+ V + NV VLDNPSPF  P QFEI++EC+  L  DLEWK+IYVGSAE E YDQ+L+ V
Sbjct: 1   MAKVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPV  G + FV QAD P+P  IP+ D +GVTV+L+TC+Y GQEFIRVGYYVNN+Y + 
Sbjct: 61  LVGPVPAGRHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTET 120

Query: 121 QLREEPPTKVLIDRVQRNILSDKPRVTKFPINFYPETN--DSGEEPPPNDPVLAETD 176
           +LRE PP K    ++QRNIL+  PRVT+F IN+   T   +  E   PN P L  TD
Sbjct: 121 ELRENPPVKPDFSKLQRNILASNPRVTRFHINWEDNTEKLEDAESSNPNLPSLLSTD 177

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BLAST of CmoCh04G031050 vs. Swiss-Prot
Match: AS1AA_XENLA (Histone chaperone asf1a-A OS=Xenopus laevis GN=asf1aa PE=1 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 4.2e-53
Identity = 99/172 (57.56%), Postives = 124/172 (72.09%), Query Frame = 1


Query: 1   MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECV 60
           M+ V + NV VLDNPSPF  P QFEI++EC+  L  DLEWK+IYVGSAE E YDQ+L+ V
Sbjct: 1   MAKVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPV  G + FV QAD P+P  IP+ D +GVTV+L+TC+Y GQEFIRVGYYVNN+Y + 
Sbjct: 61  LVGPVPAGRHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTET 120

Query: 121 QLREEPPTKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPPNDPVLA 173
           +LRE PP K    ++QRNIL+  PRVT+F IN+   T    +  P   PVL+
Sbjct: 121 ELRENPPVKPDFSKLQRNILASNPRVTRFHINWEENTEKLDDSNPHMHPVLS 172

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BLAST of CmoCh04G031050 vs. TrEMBL
Match: A0A0A0LMW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G404990 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 1.3e-101
Identity = 185/193 (95.85%), Postives = 188/193 (97.41%), Query Frame = 1


Query: 1   MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECV 60
           MSAVNITNVAVLDNPSPFSTPLQFEISYECLS LKYDLEWKLIYVGSAEVETYDQLLECV
Sbjct: 1   MSAVNITNVAVLDNPSPFSTPLQFEISYECLSALKYDLEWKLIYVGSAEVETYDQLLECV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120

Query: 121 QLREEPPTKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPPNDPVLAETDGDDQL 180
           QLREEPP KVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPP NDPV AETDGD+QL
Sbjct: 121 QLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETDGDEQL 180

Query: 181 PASPEHPSDEQIP 194
           PASPEHPS++Q P
Sbjct: 181 PASPEHPSNDQNP 193

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BLAST of CmoCh04G031050 vs. TrEMBL
Match: U5GIA8_POPTR (ASF1-like anti-silencing family protein OS=Populus trichocarpa GN=POPTR_0005s14990g PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 2.7e-83
Identity = 158/194 (81.44%), Postives = 174/194 (89.69%), Query Frame = 1


Query: 1   MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECV 60
           MSAVN+TNV VLDNP+PF +P QFEISYECL+PLK DLEWKLIYVGSAE ETYDQLLE V
Sbjct: 1   MSAVNLTNVTVLDNPAPFPSPFQFEISYECLTPLKDDLEWKLIYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQA+PPDPSKI EEDIIGVTVLLLTCSY+GQEF+RVGYYVNNDY+DE
Sbjct: 61  LVGPVNVGNYRFVLQANPPDPSKIREEDIIGVTVLLLTCSYLGQEFVRVGYYVNNDYEDE 120

Query: 121 QLREEPPTKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPPNDPVLAETDG-DDQ 180
           QLREEPP KVLID+VQRNILSDKPRVTKFPINFYPE  ++ EEPP ND   A+TDG ++Q
Sbjct: 121 QLREEPPPKVLIDKVQRNILSDKPRVTKFPINFYPENTEAAEEPPENDQP-AKTDGNEEQ 180

Query: 181 LPASPEHPSDEQIP 194
           LPASP H  D++ P
Sbjct: 181 LPASPHHALDKEGP 193

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BLAST of CmoCh04G031050 vs. TrEMBL
Match: V4W628_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016840mg PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 7.8e-83
Identity = 156/191 (81.68%), Postives = 169/191 (88.48%), Query Frame = 1


Query: 1   MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECV 60
           MSAVNITNV VLDNP+ F  P QFEISYECL+PLK DLEWKLIYVGSAE ETYDQLLE V
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLIYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQADPPDPSKI EEDIIGVTVLLLTCSY+GQEF+RVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYIGQEFVRVGYYVNNDYDDE 120

Query: 121 QLREEPPTKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPPNDPVLAETDGDDQL 180
           QLREEPP KVLIDRVQRNIL+DKPRVTKFPINF+PE N+ GE+ PP+       +G++QL
Sbjct: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENNEHGEDSPPDQATETNENGEEQL 180

Query: 181 PASPEHPSDEQ 192
           P SP+HPS EQ
Sbjct: 181 P-SPDHPSHEQ 190

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BLAST of CmoCh04G031050 vs. TrEMBL
Match: A0A067FNL9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029646mg PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 7.8e-83
Identity = 156/191 (81.68%), Postives = 169/191 (88.48%), Query Frame = 1


Query: 1   MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECV 60
           MSAVNITNV VLDNP+ F  P QFEISYECL+PLK DLEWKLIYVGSAE ETYDQLLE V
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLIYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQADPPDPSKI EEDIIGVTVLLLTCSY+GQEF+RVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYIGQEFVRVGYYVNNDYDDE 120

Query: 121 QLREEPPTKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPPNDPVLAETDGDDQL 180
           QLREEPP KVLIDRVQRNIL+DKPRVTKFPINF+PE N+ GE+ PP+       +G++QL
Sbjct: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENNEHGEDSPPDQATETNENGEEQL 180

Query: 181 PASPEHPSDEQ 192
           P SP+HPS EQ
Sbjct: 181 P-SPDHPSHEQ 190

[Close]

BLAST of CmoCh04G031050 vs. TrEMBL
Match: A0A061EHD2_THECC (Histone chaperone ASF1A OS=Theobroma cacao GN=TCM_019326 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 8.7e-82
Identity = 158/193 (81.87%), Postives = 170/193 (88.08%), Query Frame = 1


Query: 1   MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECV 60
           MSAVNITNVAVLDNP+ F TP QFEISYECL+PLK DLEWKLIYVGSAE ETYDQLLE V
Sbjct: 1   MSAVNITNVAVLDNPASFLTPFQFEISYECLTPLKDDLEWKLIYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQADPPDPSKI EEDIIGVTVLLLTCSY+GQEF+RVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFVRVGYYVNNDYDDE 120

Query: 121 QLREEPPTKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPPNDPVLAETDGDDQL 180
           QLREEPP KVLI++VQRNILSDKPRVTKFPINF+PE N   EEPPP D    E DG+++L
Sbjct: 121 QLREEPPPKVLIEKVQRNILSDKPRVTKFPINFHPE-NGGNEEPPPADHP-GENDGNEEL 180

Query: 181 PASPEHPSDEQIP 194
           PASP    ++Q P
Sbjct: 181 PASPNQKEEQQGP 191

[Close]

BLAST of CmoCh04G031050 vs. TAIR10
Match: AT5G38110.1 (AT5G38110.1 anti- silencing function 1b)

HSP 1 Score: 282.3 bits (721), Expect = 2.2e-76
Identity = 145/192 (75.52%), Postives = 160/192 (83.33%), Query Frame = 1


Query: 1   MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECV 60
           MS++NITNV VLDNP+PF  P QFEISYECL+ LK DLEWKLIYVGSAE ETYDQ+LE V
Sbjct: 1   MSSINITNVTVLDNPAPFVNPFQFEISYECLTSLKDDLEWKLIYVGSAEDETYDQVLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQAD PDP KI EEDIIGVTVLLLTCSYM QEFIRVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADSPDPLKIREEDIIGVTVLLLTCSYMDQEFIRVGYYVNNDYDDE 120

Query: 121 QLREEPPTKVLIDRVQRNILSDKPRVTKFPINFYPETNDS-GEEPPPNDPVLAETDGDDQ 180
           QLREEPPTKVLID+VQRNIL+DKPRVTKFPINF+PE   + G+ P P +P  A++  + +
Sbjct: 121 QLREEPPTKVLIDKVQRNILTDKPRVTKFPINFHPENEQTLGDGPAPTEP-FADSVVNGE 180

Query: 181 LPASPEHPSDEQ 192
            P   E P   Q
Sbjct: 181 APVFLEQPQKLQ 191

[Close]

BLAST of CmoCh04G031050 vs. TAIR10
Match: AT1G66740.1 (AT1G66740.1 ASF1 like histone chaperone)

HSP 1 Score: 280.4 bits (716), Expect = 8.3e-76
Identity = 145/195 (74.36%), Postives = 160/195 (82.05%), Query Frame = 1


Query: 1   MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECV 60
           MSA+ ITNVAVL NP+PF +P QFEISYECL+ LK DLEWKLIYVGSAE ETYDQLLE V
Sbjct: 1   MSAIKITNVAVLHNPAPFVSPFQFEISYECLNSLKDDLEWKLIYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFV QADPPDPSKI EEDIIGVTVLLLTCSYMGQEF+RVGYYVNNDY+DE
Sbjct: 61  LVGPVNVGNYRFVFQADPPDPSKIQEEDIIGVTVLLLTCSYMGQEFLRVGYYVNNDYEDE 120

Query: 121 QLREEPPTKVLIDRVQRNILSDKPRVTKFPINFYPE---TNDSGEEPPPNDPVLAETDGD 180
           QL+EEPPTKVLID+VQRNILSDKPRVTKFPI+F+PE   T  +   P  +D      +G+
Sbjct: 121 QLKEEPPTKVLIDKVQRNILSDKPRVTKFPIDFHPEEEQTAATAAPPEQSDEQQPNVNGE 180

Query: 181 DQ-LPASPEHPSDEQ 192
            Q LP     P  E+
Sbjct: 181 AQVLPDQSVEPKPEE 195

[Close]

BLAST of CmoCh04G031050 vs. NCBI nr
Match: gi|449441716|ref|XP_004138628.1| (PREDICTED: probable histone chaperone ASF1A [Cucumis sativus])

HSP 1 Score: 377.1 bits (967), Expect = 1.8e-101
Identity = 185/193 (95.85%), Postives = 188/193 (97.41%), Query Frame = 1


Query: 1   MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECV 60
           MSAVNITNVAVLDNPSPFSTPLQFEISYECLS LKYDLEWKLIYVGSAEVETYDQLLECV
Sbjct: 1   MSAVNITNVAVLDNPSPFSTPLQFEISYECLSALKYDLEWKLIYVGSAEVETYDQLLECV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120

Query: 121 QLREEPPTKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPPNDPVLAETDGDDQL 180
           QLREEPP KVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPP NDPV AETDGD+QL
Sbjct: 121 QLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETDGDEQL 180

Query: 181 PASPEHPSDEQIP 194
           PASPEHPS++Q P
Sbjct: 181 PASPEHPSNDQNP 193

[Close]

BLAST of CmoCh04G031050 vs. NCBI nr
Match: gi|659081380|ref|XP_008441304.1| (PREDICTED: probable histone chaperone ASF1A [Cucumis melo])

HSP 1 Score: 373.2 bits (957), Expect = 2.7e-100
Identity = 184/193 (95.34%), Postives = 187/193 (96.89%), Query Frame = 1


Query: 1   MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECV 60
           MSAVNITNVAVLDNPSPFSTPLQFEISYECLS LKYDLEWKLIYVGSAEVETYDQLLECV
Sbjct: 64  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSALKYDLEWKLIYVGSAEVETYDQLLECV 123

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE
Sbjct: 124 LVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 183

Query: 121 QLREEPPTKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPPNDPVLAETDGDDQL 180
           QLREEPP KVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPP NDPV AETDGD+QL
Sbjct: 184 QLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETDGDEQL 243

Query: 181 PASPEHPSDEQIP 194
            ASPEHPS++Q P
Sbjct: 244 LASPEHPSNDQNP 256

[Close]

BLAST of CmoCh04G031050 vs. NCBI nr
Match: gi|566171447|ref|XP_006383375.1| (ASF1-like anti-silencing family protein [Populus trichocarpa])

HSP 1 Score: 316.2 bits (809), Expect = 3.9e-83
Identity = 158/194 (81.44%), Postives = 174/194 (89.69%), Query Frame = 1


Query: 1   MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECV 60
           MSAVN+TNV VLDNP+PF +P QFEISYECL+PLK DLEWKLIYVGSAE ETYDQLLE V
Sbjct: 1   MSAVNLTNVTVLDNPAPFPSPFQFEISYECLTPLKDDLEWKLIYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQA+PPDPSKI EEDIIGVTVLLLTCSY+GQEF+RVGYYVNNDY+DE
Sbjct: 61  LVGPVNVGNYRFVLQANPPDPSKIREEDIIGVTVLLLTCSYLGQEFVRVGYYVNNDYEDE 120

Query: 121 QLREEPPTKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPPNDPVLAETDG-DDQ 180
           QLREEPP KVLID+VQRNILSDKPRVTKFPINFYPE  ++ EEPP ND   A+TDG ++Q
Sbjct: 121 QLREEPPPKVLIDKVQRNILSDKPRVTKFPINFYPENTEAAEEPPENDQP-AKTDGNEEQ 180

Query: 181 LPASPEHPSDEQIP 194
           LPASP H  D++ P
Sbjct: 181 LPASPHHALDKEGP 193

[Close]

BLAST of CmoCh04G031050 vs. NCBI nr
Match: gi|743821085|ref|XP_011021322.1| (PREDICTED: histone chaperone ASF1B [Populus euphratica])

HSP 1 Score: 314.7 bits (805), Expect = 1.1e-82
Identity = 157/194 (80.93%), Postives = 173/194 (89.18%), Query Frame = 1


Query: 1   MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECV 60
           MSAVN+TNV VLDNP+PF +P QFEISYECL+PLK DLEWKLIYVGSAE ETYDQLLE V
Sbjct: 1   MSAVNLTNVTVLDNPAPFPSPFQFEISYECLTPLKDDLEWKLIYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQA+PPDPSKI EEDIIGVTVLLLTCSY+GQEF+RVGYYVNNDY+DE
Sbjct: 61  LVGPVNVGNYRFVLQANPPDPSKIREEDIIGVTVLLLTCSYLGQEFVRVGYYVNNDYEDE 120

Query: 121 QLREEPPTKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPPNDPVLAETDG-DDQ 180
           QLREEPP KVLID+VQRNILSDKPRVTKFPINFYPE  ++ EEPP ND   A+TDG ++Q
Sbjct: 121 QLREEPPPKVLIDKVQRNILSDKPRVTKFPINFYPENTEAAEEPPANDQP-AKTDGNEEQ 180

Query: 181 LPASPEHPSDEQIP 194
           LP SP H  D++ P
Sbjct: 181 LPTSPHHALDKEGP 193

[Close]

BLAST of CmoCh04G031050 vs. NCBI nr
Match: gi|567912021|ref|XP_006448324.1| (hypothetical protein CICLE_v10016840mg [Citrus clementina])

HSP 1 Score: 314.7 bits (805), Expect = 1.1e-82
Identity = 156/191 (81.68%), Postives = 169/191 (88.48%), Query Frame = 1


Query: 1   MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECV 60
           MSAVNITNV VLDNP+ F  P QFEISYECL+PLK DLEWKLIYVGSAE ETYDQLLE V
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLIYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQADPPDPSKI EEDIIGVTVLLLTCSY+GQEF+RVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYIGQEFVRVGYYVNNDYDDE 120

Query: 121 QLREEPPTKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPPNDPVLAETDGDDQL 180
           QLREEPP KVLIDRVQRNIL+DKPRVTKFPINF+PE N+ GE+ PP+       +G++QL
Sbjct: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENNEHGEDSPPDQATETNENGEEQL 180

Query: 181 PASPEHPSDEQ 192
           P SP+HPS EQ
Sbjct: 181 P-SPDHPSHEQ 190

The following BLAST results are available for this feature:

BLAST of CmoCh04G031050 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ASF1B_ARATH	3.9e-75	75.52	Histone chaperone ASF1B OS=Arabidopsis thaliana GN=ASF1B PE=1 SV=1	[more]
ASF1A_ARATH	1.5e-74	74.36	Probable histone chaperone ASF1A OS=Arabidopsis thaliana GN=ASF1A PE=2 SV=1	[more]
ASF1_DROME	5.8e-55	54.92	Histone chaperone asf1 OS=Drosophila melanogaster GN=asf1 PE=1 SV=1	[more]
ASF1A_BOVIN	1.9e-53	57.63	Histone chaperone ASF1A OS=Bos taurus GN=ASF1A PE=2 SV=1	[more]
AS1AA_XENLA	4.2e-53	57.56	Histone chaperone asf1a-A OS=Xenopus laevis GN=asf1aa PE=1 SV=1	[more]

BLAST of CmoCh04G031050 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMW6_CUCSA	1.3e-101	95.85	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G404990 PE=4 SV=1	[more]
U5GIA8_POPTR	2.7e-83	81.44	ASF1-like anti-silencing family protein OS=Populus trichocarpa GN=POPTR_0005s149...	[more]
V4W628_9ROSI	7.8e-83	81.68	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016840mg PE=4 SV=1	[more]
A0A067FNL9_CITSI	7.8e-83	81.68	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029646mg PE=4 SV=1	[more]
A0A061EHD2_THECC	8.7e-82	81.87	Histone chaperone ASF1A OS=Theobroma cacao GN=TCM_019326 PE=4 SV=1	[more]

BLAST of CmoCh04G031050 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G38110.1	2.2e-76	75.52	anti- silencing function 1b	[more]
AT1G66740.1	8.3e-76	74.36	ASF1 like histone chaperone	[more]

BLAST of CmoCh04G031050 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449441716\|ref\|XP_004138628.1\|	1.8e-101	95.85	PREDICTED: probable histone chaperone ASF1A [Cucumis sativus]	[more]
gi\|659081380\|ref\|XP_008441304.1\|	2.7e-100	95.34	PREDICTED: probable histone chaperone ASF1A [Cucumis melo]	[more]
gi\|566171447\|ref\|XP_006383375.1\|	3.9e-83	81.44	ASF1-like anti-silencing family protein [Populus trichocarpa]	[more]
gi\|743821085\|ref\|XP_011021322.1\|	1.1e-82	80.93	PREDICTED: histone chaperone ASF1B [Populus euphratica]	[more]
gi\|567912021\|ref\|XP_006448324.1\|	1.1e-82	81.68	hypothetical protein CICLE_v10016840mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006818	ASF1-like

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006333	chromatin assembly or disassembly

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006333	chromatin assembly or disassembly
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G031050.1	CmoCh04G031050.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006818	Histone chaperone ASF1-like	GENE3D	G3DSA:2.60.40.1490		coord: 1..153 score: 1.3
IPR006818	Histone chaperone ASF1-like	PANTHER	PTHR12040	ANTI-SILENCING PROTEIN 1	coord: 2..191 score: 3.1E
IPR006818	Histone chaperone ASF1-like	PFAM	PF04729	ASF1_hist_chap	coord: 1..153 score: 3.8
IPR006818	Histone chaperone ASF1-like	unknown	SSF101546	ASF1-like	coord: 1..153 score: 2.49

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G031050	Cucsa.087920	Cucumber (Gy14) v1	cgycmoB0166
CmoCh04G031050	CmaCh15G000660	Cucurbita maxima (Rimu)	cmacmoB308
CmoCh04G031050	CmaCh04G029850	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G031050	Cla011851	Watermelon (97103) v1	cmowmB723
CmoCh04G031050	Csa2G404990	Cucumber (Chinese Long) v2	cmocuB684
CmoCh04G031050	MELO3C008167	Melon (DHL92) v3.5.1	cmomeB671
CmoCh04G031050	ClCG11G007620	Watermelon (Charleston Gray)	cmowcgB622
CmoCh04G031050	CSPI02G25420	Wild cucumber (PI 183967)	cmocpiB695
CmoCh04G031050	Lsi03G004150	Bottle gourd (USVL1VR-Ls)	cmolsiB645
CmoCh04G031050	Cp4.1LG01g25890	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G031050	MELO3C008167.2	Melon (DHL92) v3.6.1	cmomedB759
CmoCh04G031050	CsaV3_2G033940	Cucumber (Chinese Long) v3	cmocucB0812
CmoCh04G031050	Cla97C11G215860	Watermelon (97103) v2	cmowmbB708
CmoCh04G031050	Bhi04G002006	Wax gourd	cmowgoB0857
CmoCh04G031050	CsGy2G025060	Cucumber (Gy14) v2	cgybcmoB236
CmoCh04G031050	Carg24288	Silver-seed gourd	carcmoB1360
CmoCh04G031050	Carg06058	Silver-seed gourd	carcmoB0033

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G031050	CmoCh15G000660	Cucurbita moschata (Rifu)	cmocmoB261

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G031050	Cucurbita pepo (Zucchini)	cmocpeB657