CmoCh15G000660 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTGACCCAGGACTTGGTCGCCCTTATGTGAGCCCGATCGAATCCTGGTTCTTGAGCGTTAGATTTGTAATAAAAATTTGCCTGAAAATGAAATTCGTCTGCCCGCCATACGCCACCACAATCATTTTCGTGCCCACACCACTCCCGCCAAATCCTGCAACCGGTGATCGCCGGTGACCGCCCCAAACTTCCGGTATCCTTCATTTTCTTGTTAATCTCTCTTCCCGGCTTTTTTTTCCATTTTTCTTGCCGTGGGACTTCCGACTTCGTTCCTCTTCAACTTCTTTTTGATTCCGCCATGTTTGATGTTCGATTAACGATTTGAATTGGCCAGTAGGGTTTTGAGTTATTTCATTTCTCCGCTTATTCTATGTGAGCCGACTGTTTCTATCGAATTCGAACACAATGAGCGCTGTGAATATCACGAACGTTGCAGTTCTTGACAATCCATCGCCCTTCTCTACTCCCCTTCAGTTCGAGATCTCCTACGAGTGTTTGTCTTCTCTCAAATACGGTATTCCCTCGATCTACTTTTTGTCGCTTTCTATGTCCTATGTGTGTTCATTGATGATTTCCTGTTCAGTACTATTTCAATTAAGTTTTATTAGGGTTTACTTTTTAGAGGTTAATCTTCCAGAGCTTTTTGCATAATTGACTGTGAATGCAATCTCGGAAAAGTTAAACTAATGTCAGATAGTTTTTGGTAACGTACGAACAGGTTTGTAGTACTCGGGCGCACCTTCATACTGAAGTCCTTTAGTTTTGACTTTGAATCCTGTATCTAATATTTCTTATCTGTGAATAAAGTTTTCAATATTGCCTGAAGGATCCGAGGAATTTCTGCTTACATCAGCCGAATTACTTGATGGAAAGAAAAATGTGGTTTGATTGTAAAAGAACGTGTAAGATGACCTTTCTGGGACTTGTAAGAGAATATAGATCTGAACAGTTTGGGGGAATGAAATTAATCCCTTGATTTTTGGATTGGTAATGAATAGTGTTTATTCCTTAAAAAAAAAAAAAAAAAAAATTGTCTCCACTCAATCTTTAATATAGTTTCTGTCTCCTCTTCATGGGCGCTTTAGTTTATACCATTCTAGTGAGTAGTGACTAGTGAGAAGGGGAGATGCTGTAGTTATTTCTAGGCTTTGTCCTTATCATTTGGTGCAAACGGTAAATGTTCTAGAACTGGATATTTGGTTTCGGCAAAATGGCTAGTTAACTCTGTCTTGGACTTTTAGGTGAGTATCTTATTGTCGTCTTGGTCCACGCTTTTATTTACCTGTACCTCTAAGGTTGCAAAATTCTCTGCATGCTTTTTGAACATGAGCCTGAAGATACACTTGGAAAGTCTAGGACCTTATTCTCTATGTTATATTGCATGTTAGTGAGTCTGCCAGTGATTATCATATCATGATTCCTAATATTTTCCCTCTGTATTCATTTCTACTCCATCTAAGATTGAAGGTAAATAATTGATGTGTTAGCCCTATATATGTTGAGGGATAGGATATTACTAATTTTCAATTTATTGGATATGTAATGGGATCACTGATGATGAACCAGAATATTTATCTTAGTTTATTTATGTATCTTGGTCAATTGGATTATTGTATGAGCATATCAAGCAAAGAATTTTGGCGTTTCCTGAGTATGATTAAATTTTTGTGATGATAGCAACATTACTTATAGGCTGCTTGGTATCAAGTTAAAAAAATTACTTTGATAGAGGTTTATGATGAAACTTAAAAGGTGATTGTTTGATATGTATATGGTTTGGATGTTGGCTATTGAAAATGCACCATTTAGTTATCCAACTTCTTACTTTGCGCACAACATTAGGATATCTCAGAAGAAACTATGTTCTTTGTTTAGTCAATACTCCAGCAACGTGGTATGTATTTGATTAGGCTCTTGAGGTACTTGTGGCATATGTTTAAAGAACACTCTTGTGTACTTTAGAACTTAAGCGGTATATGTTAACAGGAAGGCAGGGAACAGAATCTGAAATACTTTCTGGTATTTTTTATGGAAAAATGGCTACAGGTCATTGAAATCAGTCACATTTTTTTTTCTTAAGGCTTCAATGAATGATGTATTGAAGACGTCCTTACAGAAATTCAGATTTGTTTTTTACTTTTATTATTTATTTTTAAGGAACCTGTTAGAAACACAAGATCTGTTTTAAATAAAAGGAAAGTGCATTTATGCAAAGCCAACTAGTATATATAGTAGGCCATAGCACCTCAGAACAATTGGTTCAGACTGACCAAAGAAAGTCTAAGCAATGTTGGATTGGATTAACTCTCGGTGGAATGGAATTGGCTTAGAGTCAAATGTAACAGTTAGCTAACTTCCGTCTGACAGACATGGAATATGCAACAGGTGCATTGGTTCATTTGAAACTTTGGCCGTACAGTCAACAGTCTTTATTAGATCGAAGATATGAAAATTTGACTTCTCACTGTTGTTGTCCACTTTGTATCATCCATAGAGTGGGTACAATCGCTTACAGTCTGGAGTTACCTTCAGGTGCTCTTATTCATCTGATGTTTCATATTTTCAAACACAGTCCCTATGGAGTTGGGACACAACCGAACCCCCTGGATAAGGCAAAAATGAAGCTCTTCTTGATATTTTCGGTCTGTATTTTGTGGTAATGTATGGATCTGGAGTAGTTTGTAAGAAGCTTCATAGAAGCAAGGGAAAAAAAAAAAGAAAAAAAAAAGAAGAGAAGTATGATTAAGCAACTAGATCGAATTGTATCATTAGGCGTGGATATTTCTTGAAGAGGTGTGAATATGCAGTTTTTTCTGTGACACCCCGAGAATAGTATAGCCAATTGATGAATGGAAATACTGTTAACTCTATTTTTAGAAGGAAATTTGAGTGGAAGTATGGAGTCTTTTTCTCAAGGTGATAAGCACCTAGTGCATAAGAAATTATTTTTATTATTGAAATATTTATTTTATTGGATTAGAAGTACATCATTTTATTGGATTGATCTATCATTGTACTTATAGTAGTACCCTCTTGGCTTAACGTTTCTACTGTTTTCTCATTCTGTTTCAGATTTGGAATGGAAACTAATTTACGTGGGGTCTGCTGAGGTTGAGACTTATGATCAACTCTTGGAGTGTGTTCTTGTTGGACCTGTCAATGTTGGTAATTACCGTTTCGTATTGCAGGTAAACTTCTGTAACGAATTTCTGTATTTTGTTATCATACATCATCTTGATTATAGAGCTACCCTTGCTATCACTCCCACATGGACCATTCCCAGGCTGACCCTCCGGACCCGTCCAGAATTCCTGAAGAAGATATCATTGGTGTAACTGTACTTCTGTTGACCTGCTCATACATGGGTCAGGAGTTTGTCCGCGTCGGTTACTACGTAAACAATGATTATGACGATGAGCAGCTAAGAGAAGAACCTCCAGCCAAAGTCCTGATCGATAGGGTTCAGAGAAACATTCTCTCTGATAAACCGAGGGTTACAAAGTTTCCCATTAATTTTTACCCAGAGACTAATGATAGTGGAGAGGAACCTCCCAACGATCCTGTATTAGCTGAAACCGACGGAGACGAACAACTACCTGCTTCGCCTGAACATCCTTCAGACGAACAAAGTCCTAAAGTTTAGCTTTGATAAAGGGACTACCATTCCAACTAAGTCAGAGTATTCCTGTGTCATGGTCGTTAACTTGTTCTCAGAGATCATCATTGCTGGAATGTGGATGGTTTTTGGGTCCAAAAGCTGAGATATTTTTTGAGAATATGATGGCTGAAATGCAGCCTTCAACAGCTGAGTTTGCGACTCAGTTCATTACACGTTGACTTGTATTCCCATGGTTTGTACTTTGTACAAAGATAGTACAAATTCATTATTTTGAAGGCCTTGTTTGATAGCTAGAAAACTTTTTTGCGTTTAAATGGAGCCAAAAAACTGTTAGATAGGAGTATGTTCATATTTTGAACAACTGTGTGTTGAATTGACCACAAAAACCAATCTACAAAGCTATTTTGTT GTTGACCCAGGACTTGGTCGCCCTTATGTGAGCCCGATCGAATCCTGGTTCTTGAGCGTTAGATTTGTAATAAAAATTTGCCTGAAAATGAAATTCGTCTGCCCGCCATACGCCACCACAATCATTTTCGTGCCCACACCACTCCCGCCAAATCCTGCAACCGGTGATCGCCGGTGACCGCCCCAAACTTCCGTAGGGTTTTGAGTTATTTCATTTCTCCGCTTATTCTATGTGAGCCGACTGTTTCTATCGAATTCGAACACAATGAGCGCTGTGAATATCACGAACGTTGCAGTTCTTGACAATCCATCGCCCTTCTCTACTCCCCTTCAGTTCGAGATCTCCTACGAGTGTTTGTCTTCTCTCAAATACGATTTGGAATGGAAACTAATTTACGTGGGGTCTGCTGAGGTTGAGACTTATGATCAACTCTTGGAGTGTGTTCTTGTTGGACCTGTCAATGTTGGTAATTACCGTTTCGTATTGCAGGCTGACCCTCCGGACCCGTCCAGAATTCCTGAAGAAGATATCATTGGTGTAACTGTACTTCTGTTGACCTGCTCATACATGGGTCAGGAGTTTGTCCGCGTCGGTTACTACGTAAACAATGATTATGACGATGAGCAGCTAAGAGAAGAACCTCCAGCCAAAGTCCTGATCGATAGGGTTCAGAGAAACATTCTCTCTGATAAACCGAGGGTTACAAAGTTTCCCATTAATTTTTACCCAGAGACTAATGATAGTGGAGAGGAACCTCCCAACGATCCTGTATTAGCTGAAACCGACGGAGACGAACAACTACCTGCTTCGCCTGAACATCCTTCAGACGAACAAAGTCCTAAAGTTTAGCTTTGATAAAGGGACTACCATTCCAACTAAGTCAGAGTATTCCTGTGTCATGGTCGTTAACTTGTTCTCAGAGATCATCATTGCTGGAATGTGGATGGTTTTTGGGTCCAAAAGCTGAGATATTTTTTGAGAATATGATGGCTGAAATGCAGCCTTCAACAGCTGAGTTTGCGACTCAGTTCATTACACGTTGACTTGTATTCCCATGGTTTGTACTTTGTACAAAGATAGTACAAATTCATTATTTTGAAGGCCTTGTTTGATAGCTAGAAAACTTTTTTGCGTTTAAATGGAGCCAAAAAACTGTTAGATAGGAGTATGTTCATATTTTGAACAACTGTGTGTTGAATTGACCACAAAAACCAATCTACAAAGCTATTTTGTT ATGAGCGCTGTGAATATCACGAACGTTGCAGTTCTTGACAATCCATCGCCCTTCTCTACTCCCCTTCAGTTCGAGATCTCCTACGAGTGTTTGTCTTCTCTCAAATACGATTTGGAATGGAAACTAATTTACGTGGGGTCTGCTGAGGTTGAGACTTATGATCAACTCTTGGAGTGTGTTCTTGTTGGACCTGTCAATGTTGGTAATTACCGTTTCGTATTGCAGGCTGACCCTCCGGACCCGTCCAGAATTCCTGAAGAAGATATCATTGGTGTAACTGTACTTCTGTTGACCTGCTCATACATGGGTCAGGAGTTTGTCCGCGTCGGTTACTACGTAAACAATGATTATGACGATGAGCAGCTAAGAGAAGAACCTCCAGCCAAAGTCCTGATCGATAGGGTTCAGAGAAACATTCTCTCTGATAAACCGAGGGTTACAAAGTTTCCCATTAATTTTTACCCAGAGACTAATGATAGTGGAGAGGAACCTCCCAACGATCCTGTATTAGCTGAAACCGACGGAGACGAACAACTACCTGCTTCGCCTGAACATCCTTCAGACGAACAAAGTCCTAAAGTTTAG
BLAST of CmoCh15G000660 vs. Swiss-Prot
Match: ASF1A_ARATH (Probable histone chaperone ASF1A OS=Arabidopsis thaliana GN=ASF1A PE=2 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 3.0e-75 Identity = 143/194 (73.71%), Postives = 156/194 (80.41%), Query Frame = 1
BLAST of CmoCh15G000660 vs. Swiss-Prot
Match: ASF1B_ARATH (Histone chaperone ASF1B OS=Arabidopsis thaliana GN=ASF1B PE=1 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 9.6e-74 Identity = 141/191 (73.82%), Postives = 157/191 (82.20%), Query Frame = 1
BLAST of CmoCh15G000660 vs. Swiss-Prot
Match: ASF1_DROME (Histone chaperone asf1 OS=Drosophila melanogaster GN=asf1 PE=1 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 7.6e-55 Identity = 107/195 (54.87%), Postives = 138/195 (70.77%), Query Frame = 1
BLAST of CmoCh15G000660 vs. Swiss-Prot
Match: ASF1A_BOVIN (Histone chaperone ASF1A OS=Bos taurus GN=ASF1A PE=2 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 1.9e-53 Identity = 101/177 (57.06%), Postives = 126/177 (71.19%), Query Frame = 1
BLAST of CmoCh15G000660 vs. Swiss-Prot
Match: ASF1_EMENI (Histone chaperone asf1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=asf1 PE=3 SV=2) HSP 1 Score: 207.6 bits (527), Expect = 1.2e-52 Identity = 100/175 (57.14%), Postives = 132/175 (75.43%), Query Frame = 1
BLAST of CmoCh15G000660 vs. TrEMBL
Match: A0A0A0LMW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G404990 PE=4 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 2.2e-101 Identity = 185/193 (95.85%), Postives = 191/193 (98.96%), Query Frame = 1
BLAST of CmoCh15G000660 vs. TrEMBL
Match: U5GIA8_POPTR (ASF1-like anti-silencing family protein OS=Populus trichocarpa GN=POPTR_0005s14990g PE=4 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 6.0e-83 Identity = 156/193 (80.83%), Postives = 172/193 (89.12%), Query Frame = 1
BLAST of CmoCh15G000660 vs. TrEMBL
Match: A0A067FNL9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029646mg PE=4 SV=1) HSP 1 Score: 308.5 bits (789), Expect = 5.7e-81 Identity = 156/191 (81.68%), Postives = 168/191 (87.96%), Query Frame = 1
BLAST of CmoCh15G000660 vs. TrEMBL
Match: V4W628_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016840mg PE=4 SV=1) HSP 1 Score: 308.5 bits (789), Expect = 5.7e-81 Identity = 156/191 (81.68%), Postives = 168/191 (87.96%), Query Frame = 1
BLAST of CmoCh15G000660 vs. TrEMBL
Match: A0A061EHD2_THECC (Histone chaperone ASF1A OS=Theobroma cacao GN=TCM_019326 PE=4 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 7.4e-81 Identity = 156/192 (81.25%), Postives = 167/192 (86.98%), Query Frame = 1
BLAST of CmoCh15G000660 vs. TAIR10
Match: AT1G66740.1 (AT1G66740.1 ASF1 like histone chaperone) HSP 1 Score: 282.7 bits (722), Expect = 1.7e-76 Identity = 143/194 (73.71%), Postives = 156/194 (80.41%), Query Frame = 1
BLAST of CmoCh15G000660 vs. TAIR10
Match: AT5G38110.1 (AT5G38110.1 anti- silencing function 1b) HSP 1 Score: 277.7 bits (709), Expect = 5.4e-75 Identity = 141/191 (73.82%), Postives = 157/191 (82.20%), Query Frame = 1
BLAST of CmoCh15G000660 vs. NCBI nr
Match: gi|449441716|ref|XP_004138628.1| (PREDICTED: probable histone chaperone ASF1A [Cucumis sativus]) HSP 1 Score: 376.3 bits (965), Expect = 3.2e-101 Identity = 185/193 (95.85%), Postives = 191/193 (98.96%), Query Frame = 1
BLAST of CmoCh15G000660 vs. NCBI nr
Match: gi|659081380|ref|XP_008441304.1| (PREDICTED: probable histone chaperone ASF1A [Cucumis melo]) HSP 1 Score: 372.5 bits (955), Expect = 4.6e-100 Identity = 184/193 (95.34%), Postives = 190/193 (98.45%), Query Frame = 1
BLAST of CmoCh15G000660 vs. NCBI nr
Match: gi|566171447|ref|XP_006383375.1| (ASF1-like anti-silencing family protein [Populus trichocarpa]) HSP 1 Score: 315.1 bits (806), Expect = 8.7e-83 Identity = 156/193 (80.83%), Postives = 172/193 (89.12%), Query Frame = 1
BLAST of CmoCh15G000660 vs. NCBI nr
Match: gi|743821085|ref|XP_011021322.1| (PREDICTED: histone chaperone ASF1B [Populus euphratica]) HSP 1 Score: 312.8 bits (800), Expect = 4.3e-82 Identity = 155/193 (80.31%), Postives = 171/193 (88.60%), Query Frame = 1
BLAST of CmoCh15G000660 vs. NCBI nr
Match: gi|743876232|ref|XP_011035137.1| (PREDICTED: histone chaperone ASF1B-like [Populus euphratica]) HSP 1 Score: 310.1 bits (793), Expect = 2.8e-81 Identity = 155/193 (80.31%), Postives = 170/193 (88.08%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|