Cucsa.085240 (gene) Cucumber (Gy14) v1

NameCucsa.085240
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionRNA-binding protein 47B
Locationscaffold00867 : 114342 .. 118677 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTTTCTCTCTCTCTTtCTCTCTAGTCTTCATTCAGCAGCCTCTCTCTCTTTTTTtCTtCTCTCTCTCTCTCTCCCTCTCCAACCTGGTCTTGTtCCTTCAAATCTAACCAGGGCCGTCGTCGCTCGGATATTTCGCCGGAGAGAGAGAGAAAAGCGAAGGAGGCGGAGACGGAGACGGAAACAGAGTGACTTTGGAGATCATGGCTCAGCCTTCAAACGGTGCCGATCTCAATCCCCAGGCTCCTCATCCTCACCACCAATGGTTtCAACAACAACAACAGTATCAGCAGCAATGGATGGCGATGCAGTACCCTGCCGCCGCCATGGCCATGATGCACCAACAGCAGATGGTGATGTATCCTCCTCAGCATTATATGGCGTATTCTCACCATCCTTATCAACAGCAACAACAGCAACAACAGCAGCCGTCGTCGCAACAGCAGCAACAGCATGCTCAGTCGCAGAGACCTCGTAGACAGGGGTCAACGGACGAGGTTAAGACGCTTTGGATTGGTGACCTTCAGCCTTGGATGGACGAGACCTACCTCAATAATTGTTTCGCTCACACCGGCGAGGTCTAAACTTACTTGTCGTATTGAGCTTTTATTTTTCACGTCTCTCTACCTCTAATTGTTGTTCGAGTTTCTGTAGATCGTTTCGAGACTTTCTGCAAGGAGATCGATCGGATTTCTTTATCTTTTCTTGTGCTTTTGCGTTCTCGAATTGATTTGAACTCTGTGAATCTGTGGTTGTTGACATTATTGTTGCTGCATCTTATATTGTTCTGAAACTGGTTTGGTGGTCCAATACGAGTCTAGCCAATGTGAGAAGACTTGTTACTAAAGAGGGGACGAGTCTTAGACCGATTTATTGTTGTATGAACATTTCTCTTTTTGCTTCCGTTAACTCAAGATGGGCTAGGACTAGGACTAGTAATTTTCATTTTCATTTTCATTTTCATTTTAGAATGTGCTTTACTATACCTCTGTCTTTGTTTTGACACTTCAATTATTCTTGATATCTTAATGATGGAGACAATTAGGCACAAGTAAATTAAGTGCAATGAGTGACATTTGATTCACAACTAGGTAATTGCTATTTTCATACATAAGCAATTTAGATGATCAGAACTCAGGATGTTTAGCACTAAGAGTCATGATCTGGTCATTTGGAATAATATGGAATAGTTGGAATTGTAACTTTGATTTTTTAGATGCTAAAGACATGGCTATTTCCTACTTCATTCACAACCTTTGCTAGGCCATTAAATTTTTtGTTTCCTTCCTCATGATTCATGAAATGCATATTGTTTTAAATCAAAACATCTACGTTTAGTTTAAATTGAAATAACGTGTGTTCTTTTCTGTGTTTCTTGTCTTAAAATATCTTGCTGCTGAATTTTTTTTCATACACTGTATGATTGGTCTTCAGTGTCATCAAATATTCTTTTGAAGGAATTGGTGTATAGTAATGTATAAGTATGACTGTATGATTACCATTTTTTTTACTTCACCTGTGCAGAATTTTTGGGTGACATTTTCTTCCTTGTATATCTTGGTCAATGTCTATATGGATACCAGACTGTTAGGTTTGGATCTTAGTTGAAGTTTCATATGTTCTTTTGGGCTTCGGTTTCGAAGCTTTTCTGTAACTATTCTCTTGGTAACATTGTACTTAGTTGGAATGGAACCCCTTCCTTTAGTAGGGGTGTTTTGGTGGACTGGCTTTTTtCTATGTCCTTTTATTCTTTCATTTTTCTTCTTAGTGAAAGTTGTTGTGTATATGAAAAAAaGTATGGATACCTCCAGACCGTCTTTTATATTTCCCCTTGTCTAAATCAATGTCCATCTAGACCATCATTTTTGGTCTTCAGTTGACTAAACTGTTTCTCTTCTTTTGCTTCATAACACGCAGGTTTCCTCTGTTAAGGTTATATGCAATAAGCAAACTGGTCAATCGGAGGGCTATGGTTTTGTTGAGTTCTTCTCGCATACGACAGCCGAAAAAGTATTGCAGAATTATAATGGTACTATCATGCCTAATACAGAGCTGCCTTTCCGTCTCAATTGGGCAACCTTTAGTGCAAATGATAGGCGACCAGACACTGGTTCTGACCTATCAATATTTGTTGGTGACTTGGCTGCCGATGTGACTGATGCTATACTGCAAGAAACTTTTTCTAGTAGATACACATCTGTTAAAGGCGCAAAGGTGGTTATTGATTCAAATTCAGGTCGTTCAAAAGGTTACGGCTTTGTCAGGTTTGGTGATGAAAATGAAAGGACAAGGGCTATGACTGAAATGAATGGGATTTATTGTTCAAGTAGACCCATGCGCATTGGTGTTGCAACACCAAAGAAAGCATCTGGATATCAACAAGGTTACGCTTCACAAGGTTAGTCTTTGTTCTTCTGGCATCACTGTTGGGTGGTGTTTCTAAGAAAATTGAAAATCTAGAAATCATCATATCTCAGACTTAATGAATGAATGATCTCATGTACCGTTATCCCTAGCACACACACCTAACAAAAAGGCAATAAAAATGCAGAACCCAAAAATATACACACAATTTACCATTCAAATTGTCTTGTTTTCAAGCAACAAGATTAGTAAATGAAAAGATGATGGTTATTATAGAAGTTTGTCATGTACAGCAGTAGAATTCTTGGCGATGGTACTTCTGACAGTTTATTACTCCGTTCTGCTAGTTTTATGAAATTACTTCAGCCACAAAAGGGTTGATGGTACTGAGGCTAGGGTCTTACTTTATTTATGTATTTtCTGGAATTCTATATTCCATTGATATATCTTTGCAATACAGGTTGAACACTTTTAGAATATGAAATCTCTTATATTAACACTTTTCAAGATTTTTCATTATTTATCCAATGCTTCTTTTCCCCACTAAATCTTCCCCTCTAAATGCTGAACCATCTCAACATTTTTGATTTTCGAGTCCATTGATGAATCTATCATTCTGTTGGTCTGGTCATGCTTTTTGGCACATTATTCTTTATTTTTGGAAATCCATGTTGGATTGTATAGTAACTTTTCTGGTGCTGGTTTTTCTTGGATGGAGAATTTCTTTTTCATTTTATCTTTTCCCTCCTGCTGCAATGATGAGTGAAGCGTCATTTTCCAAGAAATTTAGTGAACGAGTGTACTGGCCAGTATTAATGTTGTTGGCTGTTTGCCAACTAGGAGAAGAAGACTAGAACTAGAAGTGATTGATGTTTTCCATTGGCAGGAGGAGGATCCTGATCATCTTTTGTGAGTTGGAACTTGGCAGTTTGTTTATTCCTTGTGGAGTCGGCTTTTAAAGGTTTGGGGTTGTGGTGGGTAATAGGAATTGTCGCTCTAGCCTCTATGTTGGAAGAGATACTGATGAACTCTTCCTTTCGTGATAAAGGAAGAGTCATTTGACAGGCTTGCTCTTTTTCTATATTTTGGGGAGTATGACTTGAGAAGAATAGTAGAGTTTTTAGAAAGATCGAGAGGTCTTTTGAGAACGCGTGGGAGGTTGTGAGGTTTATTAATGTGTTCATAAATTAGTCTTTCTGTAGTTTTCAGCATGGTGTTATTTTCTGAATTGAAGTCTGTTTATGTAGTTGTTAAGGACTACTTTTGCAGTCTTGTTTTTTTttCCTTTTTTTTtGTATGCACTTATGAATTGTTTCATTTCTCTCCATGAAAGCTTGGTTTCTTATCTAGAAAAAGGTTTGATATTTTAATATGATACGGGCATGGTTCTTTAGGCATCTGCCCCAGTGATATTTTCTTCTTCACAAATGGGTTTTAGACATAAGCATAAGGAACATGGAACGGGCTTCTACTTCTTGTGGAGAAGATGTTCTACTAATTTATTGTGAAGTTATAAGGTGTAAATGTTATTTTTTTtCTGTTGAAGGAAACGGGCCTCTTTATTGATATAAGGTGTAAATGTTATTAAAAGGTAATTTTtGGGTTTtCATTTTGTATGTTAGATGGATGGTTGAGTCTGATGCCAATTTCTGTCTTCTTTTATTTTTATTTTATTTTATTTAGCTTTGGTACTGGCCGGTGGACATCCCAATGGCATGGCTGTTCAAGGTTCACAATCAGACAGCGAGTCAAACAACACGACTGTTAGTTTATCCCTCCCCGTCTCATGTTAATTTTCTTTCTTCCAATACATACCTAACTAACTTGTGGTACCTCAGATATTTGTTGGTGGTCTCGATTCTGATGTTAGTGATGAAGATCTGAAGCAAGCTTTCTCTAAGTTTGGTGACGTTGTCTCTGTGAAAATTCCAATTGGAAAAGGATGTGGATTTGTGCAATTTGCTAACAGGTAT

mRNA sequence

ctctttctctctctctttctctctAGTCTTCATTCAGCAGCctctctctctttttttcttctctctctctctctccctctcCAACCTGGTCTTGTTCCTTCAAATCTAACCAGGGCCGTCGTCGCTCGGATATTTCGCCGGAGAGAGAGAGAAAAGCGAAGGAGGCGGAGACGGAGACGGAAACAGAGTGACTTTGGAGATCATGGCTCAGCCTTCAAACGGTGCCGATCTCAATCCCCAGGCTCCTCATCCTCACCACCAATGGTTTCAACAACAACAACAGTATCAGCAGCAATGGATGGCGATGCAGTACCCTGCCGCCGCCATGGCCATGATGCACCAACAGCAGATGGTGATGTATCCTCCTCAGCATTATATGGCGTATTCTCACCATCCTTATcaacagcaacaacagcaacaacagcagccgtcgtcgcaacagcagcaacagcaTGCTCAGTCGCAGAGACCTCGTAGACAGGGGTCAACGGACGAGGTTAAGACGCTTTGGATTGGTGACCTTCAGCCTTGGATGGACGAGACCTACCTCAATAATTGTTTCGCTCACACCGGCGAGGTTTCCTCTGTTAAGGTTATATGCAATAAGCAAACTGGTCAATCGGAGGGCTATGGTTTTGTTGAGTTCTTCTCGCATACGACAGCCGAAAAAGTATTGCAGAATTATAATGGTACTATCATGCCTAATACAGAGCTGCCTTTCCGTCTCAATTGGGCAACCTTTAGTGCAAATGATAGGCGACCAGACACTGGTTCTGACCTATCAATATTTGTTGGTGACTTGGCTGCCGATGTGACTGATGCTATACTGCAAGAAACTTTTTCTAGTAGATACACATCTGTTAAAGGCGCAAAGGTGGTTATTGATTCAAATTCAGGTCGTTCAAAAGGTTACGGCTTTGTCAGGTTTGGTGATGAAAATGAAAGGACAAGGGCTATGACTGAAATGAATGGGATTTATTGTTCAAGTAGACCCATGCGCATTGGTGTTGCAACACCAAAGAAAGCATCTGGATATCAACAAGGTTACGCTTCACAAGGAAACGGGCCTCTTTATTGATATAAGGTGTAAATGTTATTAAAAGCTTTGGTACTGGCCGGTGGACATCCCAATGGCATGGCTGTTCAAGGTTCACAATCAGACAGCGAGTCAAACAACACGACTATATTTGTTGGTGGTCTCGATTCTGATGTTAGTGATGAAGATCTGAAGCAAGCTTTCTCTAAGTTTGGTGACGTTGTCTCTGTGAAAATTCCAATTGGAAAAGGATGTGGATTTGTGCAATTTGCTAACAGGTAT

Coding sequence (CDS)

ATGGCTCAGCCTTCAAACGGTGCCGATCTCAATCCCCAGGCTCCTCATCCTCACCACCAATGGTTtCAACAACAACAACAGTATCAGCAGCAATGGATGGCGATGCAGTACCCTGCCGCCGCCATGGCCATGATGCACCAACAGCAGATGGTGATGTATCCTCCTCAGCATTATATGGCGTATTCTCACCATCCTTATCAACAGCAACAACAGCAACAACAGCAGCCGTCGTCGCAACAGCAGCAACAGCATGCTCAGTCGCAGAGACCTCGTAGACAGGGGTCAACGGACGAGGTTAAGACGCTTTGGATTGGTGACCTTCAGCCTTGGATGGACGAGACCTACCTCAATAATTGTTTCGCTCACACCGGCGAGGTTTCCTCTGTTAAGGTTATATGCAATAAGCAAACTGGTCAATCGGAGGGCTATGGTTTTGTTGAGTTCTTCTCGCATACGACAGCCGAAAAAGTATTGCAGAATTATAATGGTACTATCATGCCTAATACAGAGCTGCCTTTCCGTCTCAATTGGGCAACCTTTAGTGCAAATGATAGGCGACCAGACACTGGTTCTGACCTATCAATATTTGTTGGTGACTTGGCTGCCGATGTGACTGATGCTATACTGCAAGAAACTTTTTCTAGTAGATACACATCTGTTAAAGGCGCAAAGGTGGTTATTGATTCAAATTCAGGTCGTTCAAAAGGTTACGGCTTTGTCAGGTTTGGTGATGAAAATGAAAGGACAAGGGCTATGACTGAAATGAATGGGATTTATTGTTCAAGTAGACCCATGCGCATTGGTGTTGCAACACCAAAGAAAGCATCTGGATATCAACAAGGTTACGCTTCACAAGGAAACGGGCCTCTTTATTGA

Protein sequence

MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMVMYPPQHYMAYSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATFSANDRRPDTGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQGNGPLY*
BLAST of Cucsa.085240 vs. Swiss-Prot
Match: RB47B_ARATH (Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana GN=RBP47B PE=2 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 6.9e-100
Identity = 190/296 (64.19%), Postives = 224/296 (75.68%), Query Frame = 1

Query: 3   QPSNGADL----------NPQAPHPHHQWFQQQQQYQQQWM-AMQY-PAAAMAMMHQQQM 62
           Q +NG+D           N Q P P  QW QQQQQ QQQWM AMQY PAAAM MM QQQM
Sbjct: 2   QTTNGSDSTLATSGATPPNQQTPPPPQQW-QQQQQQQQQWMAAMQYPPAAAMMMMQQQQM 61

Query: 63  VMYPPQHYMAYSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPW 122
           +MYP Q Y+ Y+  PYQQ   Q  Q  S QQ QH Q +   R GS D+VKTLW+GDL  W
Sbjct: 62  LMYPHQ-YVPYNQGPYQQHHPQLHQYGSYQQHQHQQHKAIDR-GSGDDVKTLWVGDLLHW 121

Query: 123 MDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTE 182
           MDETYL++CF+HTGEVSSVKVI NK T QSEGYGFVEF S   AE+VLQNY+G++MPN++
Sbjct: 122 MDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSD 181

Query: 183 LPFRLNWATFSANDRRP-DTGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDS 242
            PFR+NWA+FS  ++R  + G DLS+FVGDL+ DVTD +L ETFS RY SVK AKVVIDS
Sbjct: 182 QPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDS 241

Query: 243 NSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQ 286
           N+GRSKGYGFVRFGDENER+RA+TEMNG YCS+R MR+G+ATPK+A   QQ ++SQ
Sbjct: 242 NTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQ 294


HSP 2 Score: 65.1 bits (157), Expect = 1.5e-09
Identity = 60/222 (27.03%), Postives = 97/222 (43.69%), Query Frame = 1

Query: 101 TLWIGDLQPWMDETYLNNCFAHT-GEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQ 160
           ++++GDL P + +  L+  F+     V S KV+ +  TG+S+GYGFV F       + L 
Sbjct: 203 SVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALT 262

Query: 161 NYNGTIMPNTELPFRLNWAT---FSANDRRPDT------------------------GSD 220
             NG    N ++  R+  AT     AN ++  +                         ++
Sbjct: 263 EMNGAYCSNRQM--RVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTN 322

Query: 221 LSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAM 280
            +IFVG +  DV D  L++ F S++  V   K+ +       KG GFV+F D      A+
Sbjct: 323 ATIFVGGIDPDVIDEDLRQPF-SQFGEVVSVKIPV------GKGCGFVQFADRKSAEDAI 382

Query: 281 TEMNGIYCSSRPMRIGVA-TPKKA----SGYQ-QGYASQGNG 289
             +NG       +R+    +P K     SG Q  G  S+G+G
Sbjct: 383 ESLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWNGGYSRGHG 415

BLAST of Cucsa.085240 vs. Swiss-Prot
Match: RB47A_ARATH (Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana GN=RBP47A PE=2 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 1.3e-98
Identity = 185/277 (66.79%), Postives = 212/277 (76.53%), Query Frame = 1

Query: 13  QAPHPHHQWFQQQQQYQQQWMA--MQYPAAAMAMMHQQQMVMYPPQHYMAYSHHPYQQQQ 72
           Q+  P  Q  QQQ Q QQQWMA   QYPAAAMAMM QQQM+MYP   Y  Y+   YQQ  
Sbjct: 29  QSTPPPQQQQQQQWQQQQQWMAAMQQYPAAAMAMMQQQQMMMYPHPQYAPYNQAAYQQHP 88

Query: 73  QQQQQPSSQQQQQHAQSQRPRRQGST-DEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSV 132
           Q Q     QQQQQH QSQ+  R GS  D+VKTLW+GDL  WMDETYL+ CF+HT EVSSV
Sbjct: 89  QFQYAAYQQQQQQHHQSQQQPRGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSV 148

Query: 133 KVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATFSANDRR-PD 192
           KVI NKQT QSEGYGFVEF S + AE+ LQ+++G  MPN E PFRLNWA+FS  ++R  +
Sbjct: 149 KVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRASE 208

Query: 193 TGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENER 252
            G DLSIFVGDLA DV+DA+L ETF+ RY SVKGAKVVIDSN+GRSKGYGFVRFGDENER
Sbjct: 209 NGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENER 268

Query: 253 TRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQ 286
           +RAMTEMNG +CSSR MR+G+ATPK+A+ Y Q   SQ
Sbjct: 269 SRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQ 305


HSP 2 Score: 65.9 bits (159), Expect = 8.6e-10
Identity = 60/225 (26.67%), Postives = 90/225 (40.00%), Query Frame = 1

Query: 101 TLWIGDLQPWMDETYLNNCFA-HTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQ 160
           ++++GDL P + +  L   FA     V   KV+ +  TG+S+GYGFV F       + + 
Sbjct: 214 SIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMT 273

Query: 161 NYNGTIMPNTELPFRLNWAT---------------------FSANDRRPDTGSDLS-IFV 220
             NG    + ++  R+  AT                        N    D  S+ S IFV
Sbjct: 274 EMNGAFCSSRQM--RVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSMSDGESNNSTIFV 333

Query: 221 GDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNG 280
           G L ADVT+  L + FS  +  V   K+ +       KG GFV+F +      A+  +NG
Sbjct: 334 GGLDADVTEEDLMQPFSD-FGEVVSVKIPV------GKGCGFVQFANRQSAEEAIGNLNG 393

Query: 281 IYCSSRPMRIGVA-TPKK----------------ASGYQQGYASQ 286
                  +R+    +P K                  GY  GYA+Q
Sbjct: 394 TVIGKNTVRLSWGRSPNKQWRSDSGNQWNGGYSRGQGYNNGYANQ 429

BLAST of Cucsa.085240 vs. Swiss-Prot
Match: RBP47_NICPL (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia GN=RBP47 PE=1 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 3.5e-96
Identity = 183/297 (61.62%), Postives = 218/297 (73.40%), Query Frame = 1

Query: 6   NGADLNPQAPHPHHQWFQQQQQ------YQQQWMAMQYPAAAMAMMHQQQMVMYPPQHYM 65
           NG D+N Q      Q  QQQQQ      YQQQWMAMQYPAAAMAM   QQ +MY  Q+  
Sbjct: 2   NGGDMNQQQQQQQQQHQQQQQQWLAMQQYQQQWMAMQYPAAAMAM---QQQMMYGQQYMP 61

Query: 66  AYSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNC 125
            Y  H  QQQQ+ QQ P+             + Q S+++ KT+WIGDLQ WMDE+YL++C
Sbjct: 62  YYQQH--QQQQKMQQSPT-------------QIQSSSEDNKTIWIGDLQQWMDESYLHSC 121

Query: 126 FAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWAT 185
           F+  GEV SVK+I NKQTGQSE YGFVEF +H  AEKVLQ+YNGT+MPNTE PFRLNWA 
Sbjct: 122 FSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAG 181

Query: 186 FSANDRRPDTGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGF 245
           FS  ++R +TGSD SIFVGDLA+DVTD +L++TF+SRY S+KGAKVV+D+N+G SKGYGF
Sbjct: 182 FSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGF 241

Query: 246 VRFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQ----------GYASQG 287
           VRFGDE+ER+RAMTEMNG+YCSSR MRIGVATPKK S ++Q          GYAS G
Sbjct: 242 VRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKPSAHEQYSSQAVILSGGYASNG 280


HSP 2 Score: 45.8 bits (107), Expect = 9.2e-04
Identity = 30/92 (32.61%), Postives = 48/92 (52.17%), Query Frame = 1

Query: 101 TLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQN 160
           T+++G L   + +  L   F   GEV SVK+   K      G GFV+F   ++A++ +Q 
Sbjct: 296 TIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPAGK------GCGFVQFSDRSSAQEAIQK 355

Query: 161 YNGTIMPNTELPFRLNWATFSANDR-RPDTGS 192
            +G I+    +  RL+W    AN + R D+GS
Sbjct: 356 LSGAIIGKQAV--RLSWGRSPANKQMRTDSGS 379

BLAST of Cucsa.085240 vs. Swiss-Prot
Match: RBP45_NICPL (Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia GN=RBP45 PE=1 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 2.9e-74
Identity = 160/291 (54.98%), Postives = 189/291 (64.95%), Query Frame = 1

Query: 4   PSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMVMYPPQHYMAYSH 63
           P +G    P AP         Q QYQQQ      P        QQQ  M PPQ       
Sbjct: 3   PQSGVAQPPMAPMS-----MDQHQYQQQ-----APPPT-----QQQQWMMPPQQPQQPQF 62

Query: 64  HPYQQQQQQQQQPSSQQQQQHAQSQ-RPRRQGSTDEVKTLWIGDLQPWMDETYLNNCFAH 123
            P Q Q    QQPS QQ    A +   P   G+ +EV++LWIGDLQ WMDE YL+ CF H
Sbjct: 63  QP-QSQPAWAQQPSQQQYGAMATTNPNPSPTGNPNEVRSLWIGDLQYWMDENYLSTCFYH 122

Query: 124 TGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATFSA 183
           TGE+ S KVI NKQTGQSEGYGF+EF SH  AE +LQ YNGT+MPN E  FR+NWA+  A
Sbjct: 123 TGELVSAKVIRNKQTGQSEGYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGA 182

Query: 184 NDRRPDTGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRF 243
            +RR D+ ++ +IFVGDLAADVTD ILQETF S Y+SV+GAKVV D  +GRSKGYGFV+F
Sbjct: 183 GERRDDS-AEHTIFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKF 242

Query: 244 GDENERTRAMTEMNGIYCSSRPMRIG-------VATPKKASGYQQGYASQG 287
            DE+E+ RAMTEMNG+ CS+RPMRIG       V TP+KA+ YQ   A+QG
Sbjct: 243 ADESEQLRAMTEMNGVLCSTRPMRIGPAANKKPVGTPQKAT-YQNPQATQG 275


HSP 2 Score: 61.6 bits (148), Expect = 1.6e-08
Identity = 57/228 (25.00%), Postives = 95/228 (41.67%), Query Frame = 1

Query: 91  RRQGSTDEVKTLWIGDLQPWMDETYLNNCFAHT-GEVSSVKVICNKQTGQSEGYGFVEFF 150
           RR  S +   T+++GDL   + +  L   F      V   KV+ ++ TG+S+GYGFV+F 
Sbjct: 169 RRDDSAEH--TIFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFA 228

Query: 151 SHTTAEKVLQNYNGTIMPNTEL-------------PFRLNWATFSANDRRPDTGSDLSIF 210
             +   + +   NG +     +             P +  +    A     D  ++ +IF
Sbjct: 229 DESEQLRAMTEMNGVLCSTRPMRIGPAANKKPVGTPQKATYQNPQATQGESDP-NNTTIF 288

Query: 211 VGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMN 270
           VG L   V +  L++ FS  Y  +   K+V        K  GFV+FG      +A++ +N
Sbjct: 289 VGGLDPTVAEEHLRQVFSP-YGELVHVKIV------AGKRCGFVQFGTRASAEQALSSLN 348

Query: 271 GIYCSSRPMRI--GVATPKKAS-------------GYQQGYASQGNGP 290
           G     + +R+  G +   K +             GY QGY + G  P
Sbjct: 349 GTQLGGQSIRLSWGRSPSSKQTDQTQWGGSGGAYYGYGQGYEAYGYAP 386

BLAST of Cucsa.085240 vs. Swiss-Prot
Match: R47CP_ARATH (Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana GN=RBP47C' PE=2 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 7.9e-72
Identity = 154/287 (53.66%), Postives = 183/287 (63.76%), Query Frame = 1

Query: 6   NGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMVMYPPQHYMAYSHHP 65
           N    +P  P PH  W             M+YP   M  M      MY P   M +S  P
Sbjct: 39  NQPKTSPTPPPPH--W-------------MRYPPVLMPQM------MYAPPPPMPFS--P 98

Query: 66  YQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTD-EVKTLWIGDLQPWMDETYLNNCF--AH 125
           Y Q               H QS+  + Q + + E KT+W+GDLQ WMDE YLN+ F  A 
Sbjct: 99  YHQYPNHHHF--------HHQSRGNKHQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAE 158

Query: 126 TGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATFSA 185
             E+ S+KVI NK  G SEGYGFVEF SH  A+KVLQ +NG  MPNT+ PFRLNWA+FS 
Sbjct: 159 EREIVSLKVIRNKHNGSSEGYGFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWASFST 218

Query: 186 NDRR-PDTGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVR 245
            ++R  + G DLSIFVGDLA DV+DA+L ETFS +Y SVK AKVV+D+N+GRSKGYGFVR
Sbjct: 219 GEKRLENNGPDLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVR 278

Query: 246 FGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQ--GYASQG 287
           FGDENERT+AMTEMNG+ CSSR MRIG ATP+K +GYQQ  GY   G
Sbjct: 279 FGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQQGGYMPSG 294


HSP 2 Score: 64.7 bits (156), Expect = 1.9e-09
Identity = 51/205 (24.88%), Postives = 88/205 (42.93%), Query Frame = 1

Query: 101 TLWIGDLQPWMDETYLNNCFAHT-GEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQ 160
           ++++GDL P + +  L+  F+     V + KV+ +  TG+S+GYGFV F       K + 
Sbjct: 200 SIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMT 259

Query: 161 NYNGTIMPNTEL------PFRLN-------WATFSANDRRPDTGSDLSIFVGDLAADVTD 220
             NG    +  +      P + N       +    A  R      + +IFVG L + VTD
Sbjct: 260 EMNGVKCSSRAMRIGPATPRKTNGYQQQGGYMPSGAFTRSEGDTINTTIFVGGLDSSVTD 319

Query: 221 AILQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRPMR 280
             L++ F S +  +   K+ +       KG GFV+F +      A+ ++NG     + +R
Sbjct: 320 EDLKQPF-SEFGEIVSVKIPV------GKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVR 379

Query: 281 IGVATPKKASGYQQGYASQGNGPLY 292
           +           +  Y +Q   P Y
Sbjct: 380 LSWGRNPANKQPRDKYGNQWVDPYY 397

BLAST of Cucsa.085240 vs. TrEMBL
Match: M5VJS3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005661mg PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 1.3e-110
Identity = 211/307 (68.73%), Postives = 234/307 (76.22%), Query Frame = 1

Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQ-------YQQQWMAMQYPAAAMAMMHQQQMVMY 60
           MAQ SNG DL  Q      Q  QQQQQ       +QQQWMAMQYPAAAMAMM QQ MV  
Sbjct: 1   MAQQSNGGDLGTQQQQQQQQQQQQQQQQWMHQHQHQQQWMAMQYPAAAMAMMQQQMMVY- 60

Query: 61  PPQHYMAYS----------HHPYQQQQQ-----QQQQPSSQQQQQHAQSQRPRRQGSTDE 120
            PQHYM Y+          H+PYQQQ Q     QQQQP  Q QQ  +Q     +QG TDE
Sbjct: 61  -PQHYMPYAAAAAHPHHPHHNPYQQQPQGVPYQQQQQPPKQLQQSPSQ-----KQGPTDE 120

Query: 121 VKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVL 180
           ++T+W+GDL  WMDETYL+ CFAHTG+VS+VKVI NKQT QSEGYGFVEFFS   AE+VL
Sbjct: 121 IRTIWVGDLHHWMDETYLHGCFAHTGQVSTVKVIRNKQTAQSEGYGFVEFFSREAAEEVL 180

Query: 181 QNYNGTIMPNTELPFRLNWATFSANDRRPDTGSDLSIFVGDLAADVTDAILQETFSSRYT 240
           Q+YNG  MPNTE PFRLNWATFSA DRR DT SDLSIFVGDLA DVTD +LQETF SRY+
Sbjct: 181 QSYNGAAMPNTEQPFRLNWATFSAGDRRADTSSDLSIFVGDLATDVTDTMLQETFGSRYS 240

Query: 241 SVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGY 286
           SVKGAKVV+D+N+GRSKGYGFVRFGDENER+RA+TEMNG YCSSRPMRIGVATPKK+  Y
Sbjct: 241 SVKGAKVVLDANTGRSKGYGFVRFGDENERSRAITEMNGAYCSSRPMRIGVATPKKSPAY 300

BLAST of Cucsa.085240 vs. TrEMBL
Match: A0A151UAI9_CAJCA (Putative RNA-binding protein C23E6.01c OS=Cajanus cajan GN=KK1_020572 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 1.8e-110
Identity = 206/286 (72.03%), Postives = 224/286 (78.32%), Query Frame = 1

Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMVMYPPQHYMA 60
           MAQPS   DLN QA  P  QW  Q  QYQ QWMAMQYPA AMAMM QQQM+MYP QHYM 
Sbjct: 1   MAQPSTNGDLNQQAQQPQQQW-PQPPQYQHQWMAMQYPATAMAMM-QQQMMMYP-QHYMP 60

Query: 61  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF 120
           Y HH Y         P  Q    H   Q      S+DE++T+W+GDL  WMDE YL+NCF
Sbjct: 61  YVHHQYPPPP-----PPPQHHHHHNTKQLSAAASSSDEIRTIWLGDLHHWMDENYLHNCF 120

Query: 121 AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATF 180
           AHTGEV S KVI NKQTGQSEGYGFVEF+S  TAEKVLQNYNGT+MPNT+  FRLNWATF
Sbjct: 121 AHTGEVVSAKVIRNKQTGQSEGYGFVEFYSRVTAEKVLQNYNGTMMPNTDQAFRLNWATF 180

Query: 181 SANDRRP-DTGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGF 240
           SA DRR  D  SDLSIFVGDLA DVTDA+LQETF+SR++S+KGAKVVIDSN+GRSKGYGF
Sbjct: 181 SAGDRRSSDATSDLSIFVGDLAIDVTDAMLQETFASRFSSIKGAKVVIDSNTGRSKGYGF 240

Query: 241 VRFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQ 286
           VRFGDENERTRAMTEMNG+YCSSRPMRIGVATPKK  GYQQ Y+SQ
Sbjct: 241 VRFGDENERTRAMTEMNGVYCSSRPMRIGVATPKKTYGYQQQYSSQ 278

BLAST of Cucsa.085240 vs. TrEMBL
Match: A0A151UAI9_CAJCA (Putative RNA-binding protein C23E6.01c OS=Cajanus cajan GN=KK1_020572 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 9.0e-06
Identity = 50/205 (24.39%), Postives = 85/205 (41.46%), Query Frame = 1

Query: 91  RRQGSTDEVKTLWIGDLQPWMDETYLNNCFAHT-GEVSSVKVICNKQTGQSEGYGFVEFF 150
           RR        ++++GDL   + +  L   FA     +   KV+ +  TG+S+GYGFV F 
Sbjct: 177 RRSSDATSDLSIFVGDLAIDVTDAMLQETFASRFSSIKGAKVVIDSNTGRSKGYGFVRFG 236

Query: 151 SHTTAEKVLQNYNGTIMPNTELPFRLNWAT----------FSAN-----DRRPDTG---- 210
                 + +   NG     +  P R+  AT          +S+         P  G    
Sbjct: 237 DENERTRAMTEMNGVYC--SSRPMRIGVATPKKTYGYQQQYSSQAVVLAGGHPANGAVAQ 296

Query: 211 --------SDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRF 268
                   ++ +IFVG L +D++D  L++ F  ++  V   K+ +       KG GFV+F
Sbjct: 297 GSHSEGDFNNTTIFVGGLDSDISDEELRQPF-LQFGEVVSVKIPV------GKGCGFVQF 356


HSP 2 Score: 406.8 bits (1044), Expect = 2.3e-110
Identity = 207/286 (72.38%), Postives = 225/286 (78.67%), Query Frame = 1

Query: 3   QPSNGADLNPQAPHPHHQWFQQQQQYQQQ---WMAMQYPAAAMAMMHQQQMVMYPPQHYM 62
           Q SNG D++      H QW QQQQQ QQQ   WMAMQYPAAAM M HQ   +MYP QHYM
Sbjct: 2   QTSNGGDMSQD----HQQWMQQQQQQQQQQQQWMAMQYPAAAMVMQHQ---MMYP-QHYM 61

Query: 63  AYSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNC 122
            Y HHP   QQ Q Q P   Q Q H         GSTDE+KTLW+GDL  WMD+ YL  C
Sbjct: 62  PY-HHPQPPQQYQNQPP---QHQMH---------GSTDEIKTLWVGDLHQWMDDNYLRTC 121

Query: 123 FAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWAT 182
           F HTGEVSS+K+I NKQTGQSEGYGFVEFFS  TAEK+L +YNGT+MPNTE PFRLNWAT
Sbjct: 122 FGHTGEVSSIKIIRNKQTGQSEGYGFVEFFSRATAEKILHSYNGTLMPNTEQPFRLNWAT 181

Query: 183 FSANDRRPDTGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGF 242
           FS  DRR D GSDLSIFVGDLA+DVTDA+LQETF++RY SVKGAKVV DSN+GRSKGYGF
Sbjct: 182 FSTGDRRTDAGSDLSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGF 241

Query: 243 VRFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQ 286
           VRFGDENER+RAM EMNGIYCSSRPMRIGVATPKKASGYQQ Y+SQ
Sbjct: 242 VRFGDENERSRAMNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQ 266

BLAST of Cucsa.085240 vs. TrEMBL
Match: F6HQD9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g00850 PE=4 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 6.0e-02
Identity = 32/112 (28.57%), Postives = 50/112 (44.64%), Query Frame = 1

Query: 66  YQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCFAHTGE 125
           YQQQ   Q    +     +    +  +        T+++G L   + +  L   F+  GE
Sbjct: 259 YQQQYSSQALVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGE 318

Query: 126 VSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNW 178
           V SVK+   K      G GFV+F +  +AE  LQ  NGT++    +  RL+W
Sbjct: 319 VVSVKIPVGK------GCGFVQFANRNSAEDALQRLNGTVIGKQTV--RLSW 362


HSP 2 Score: 405.2 bits (1040), Expect = 6.7e-110
Identity = 208/288 (72.22%), Postives = 233/288 (80.90%), Query Frame = 1

Query: 5   SNGADLNP--QAPHPHHQWFQQQQQYQQ----QWM-AMQYPAAAMAMMHQQQMVMYPPQH 64
           +N  DLN   Q   P  Q  QQQQQ+ Q    QWM AMQYPAAAM MM QQQM+MYP  H
Sbjct: 6   TNAPDLNSKQQQQPPTQQTRQQQQQHPQWVPNQWMGAMQYPAAAMVMM-QQQMMMYPHHH 65

Query: 65  YMAYSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLN 124
           YMAY++H Y  QQ QQQQ   Q+QQQ   S         DEVKT+W+GDL  WMDETYL+
Sbjct: 66  YMAYNNHHYHYQQYQQQQQQQQKQQQGCNS---------DEVKTIWVGDLVHWMDETYLH 125

Query: 125 NCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNW 184
            CF+HTGEVSSVK+I NKQTGQSEGYGFVEF+S  TAEKVLQ+YNG++MPNTE  FRLNW
Sbjct: 126 GCFSHTGEVSSVKIIRNKQTGQSEGYGFVEFYSRATAEKVLQSYNGSLMPNTEQTFRLNW 185

Query: 185 ATFSANDRRPDTGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGY 244
           A+FS N+RRPD GSDLSIFVGDLA DVTD+IL ETFSSR+ SVKGAKVVIDSN+GRSKGY
Sbjct: 186 ASFSVNERRPDAGSDLSIFVGDLATDVTDSILLETFSSRFQSVKGAKVVIDSNTGRSKGY 245

Query: 245 GFVRFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQ 286
           GFVRFGDENER+RAMTEMNG+YCS+RPMRIGVATPKKASG+QQ Y+SQ
Sbjct: 246 GFVRFGDENERSRAMTEMNGVYCSNRPMRIGVATPKKASGHQQQYSSQ 283

BLAST of Cucsa.085240 vs. TrEMBL
Match: A0A0D2R7U8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G025400 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 6.7e-110
Identity = 208/288 (72.22%), Postives = 233/288 (80.90%), Query Frame = 1

Query: 5   SNGADLNP--QAPHPHHQWFQQQQQYQQ----QWM-AMQYPAAAMAMMHQQQMVMYPPQH 64
           +N  DLN   Q   P  Q  QQQQQ+ Q    QWM AMQYPAAAM MM QQQM+MYP  H
Sbjct: 6   TNAPDLNSKQQQQPPTQQTRQQQQQHPQWVPNQWMGAMQYPAAAMVMM-QQQMMMYPHHH 65

Query: 65  YMAYSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLN 124
           YMAY++H Y  QQ QQQQ   Q+QQQ   S         DEVKT+W+GDL  WMDETYL+
Sbjct: 66  YMAYNNHHYHYQQYQQQQQQQQKQQQGCNS---------DEVKTIWVGDLVHWMDETYLH 125

Query: 125 NCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNW 184
            CF+HTGEVSSVK+I NKQTGQSEGYGFVEF+S  TAEKVLQ+YNG++MPNTE  FRLNW
Sbjct: 126 GCFSHTGEVSSVKIIRNKQTGQSEGYGFVEFYSRATAEKVLQSYNGSLMPNTEQTFRLNW 185

Query: 185 ATFSANDRRPDTGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGY 244
           A+FS N+RRPD GSDLSIFVGDLA DVTD+IL ETFSSR+ SVKGAKVVIDSN+GRSKGY
Sbjct: 186 ASFSVNERRPDAGSDLSIFVGDLATDVTDSILLETFSSRFQSVKGAKVVIDSNTGRSKGY 245

Query: 245 GFVRFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQ 286
           GFVRFGDENER+RAMTEMNG+YCS+RPMRIGVATPKKASG+QQ Y+SQ
Sbjct: 246 GFVRFGDENERSRAMTEMNGVYCSNRPMRIGVATPKKASGHQQQYSSQ 283

BLAST of Cucsa.085240 vs. TAIR10
Match: AT3G19130.1 (AT3G19130.1 RNA-binding protein 47B)

HSP 1 Score: 365.2 bits (936), Expect = 3.9e-101
Identity = 190/296 (64.19%), Postives = 224/296 (75.68%), Query Frame = 1

Query: 3   QPSNGADL----------NPQAPHPHHQWFQQQQQYQQQWM-AMQY-PAAAMAMMHQQQM 62
           Q +NG+D           N Q P P  QW QQQQQ QQQWM AMQY PAAAM MM QQQM
Sbjct: 2   QTTNGSDSTLATSGATPPNQQTPPPPQQW-QQQQQQQQQWMAAMQYPPAAAMMMMQQQQM 61

Query: 63  VMYPPQHYMAYSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPW 122
           +MYP Q Y+ Y+  PYQQ   Q  Q  S QQ QH Q +   R GS D+VKTLW+GDL  W
Sbjct: 62  LMYPHQ-YVPYNQGPYQQHHPQLHQYGSYQQHQHQQHKAIDR-GSGDDVKTLWVGDLLHW 121

Query: 123 MDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTE 182
           MDETYL++CF+HTGEVSSVKVI NK T QSEGYGFVEF S   AE+VLQNY+G++MPN++
Sbjct: 122 MDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSD 181

Query: 183 LPFRLNWATFSANDRRP-DTGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDS 242
            PFR+NWA+FS  ++R  + G DLS+FVGDL+ DVTD +L ETFS RY SVK AKVVIDS
Sbjct: 182 QPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDS 241

Query: 243 NSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQ 286
           N+GRSKGYGFVRFGDENER+RA+TEMNG YCS+R MR+G+ATPK+A   QQ ++SQ
Sbjct: 242 NTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQ 294


HSP 2 Score: 65.1 bits (157), Expect = 8.3e-11
Identity = 60/222 (27.03%), Postives = 97/222 (43.69%), Query Frame = 1

Query: 101 TLWIGDLQPWMDETYLNNCFAHT-GEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQ 160
           ++++GDL P + +  L+  F+     V S KV+ +  TG+S+GYGFV F       + L 
Sbjct: 203 SVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALT 262

Query: 161 NYNGTIMPNTELPFRLNWAT---FSANDRRPDT------------------------GSD 220
             NG    N ++  R+  AT     AN ++  +                         ++
Sbjct: 263 EMNGAYCSNRQM--RVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTN 322

Query: 221 LSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAM 280
            +IFVG +  DV D  L++ F S++  V   K+ +       KG GFV+F D      A+
Sbjct: 323 ATIFVGGIDPDVIDEDLRQPF-SQFGEVVSVKIPV------GKGCGFVQFADRKSAEDAI 382

Query: 281 TEMNGIYCSSRPMRIGVA-TPKKA----SGYQ-QGYASQGNG 289
             +NG       +R+    +P K     SG Q  G  S+G+G
Sbjct: 383 ESLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWNGGYSRGHG 415

BLAST of Cucsa.085240 vs. TAIR10
Match: AT1G49600.1 (AT1G49600.1 RNA-binding protein 47A)

HSP 1 Score: 360.9 bits (925), Expect = 7.3e-100
Identity = 185/277 (66.79%), Postives = 212/277 (76.53%), Query Frame = 1

Query: 13  QAPHPHHQWFQQQQQYQQQWMA--MQYPAAAMAMMHQQQMVMYPPQHYMAYSHHPYQQQQ 72
           Q+  P  Q  QQQ Q QQQWMA   QYPAAAMAMM QQQM+MYP   Y  Y+   YQQ  
Sbjct: 29  QSTPPPQQQQQQQWQQQQQWMAAMQQYPAAAMAMMQQQQMMMYPHPQYAPYNQAAYQQHP 88

Query: 73  QQQQQPSSQQQQQHAQSQRPRRQGST-DEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSV 132
           Q Q     QQQQQH QSQ+  R GS  D+VKTLW+GDL  WMDETYL+ CF+HT EVSSV
Sbjct: 89  QFQYAAYQQQQQQHHQSQQQPRGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSV 148

Query: 133 KVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATFSANDRR-PD 192
           KVI NKQT QSEGYGFVEF S + AE+ LQ+++G  MPN E PFRLNWA+FS  ++R  +
Sbjct: 149 KVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRASE 208

Query: 193 TGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENER 252
            G DLSIFVGDLA DV+DA+L ETF+ RY SVKGAKVVIDSN+GRSKGYGFVRFGDENER
Sbjct: 209 NGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENER 268

Query: 253 TRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQ 286
           +RAMTEMNG +CSSR MR+G+ATPK+A+ Y Q   SQ
Sbjct: 269 SRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQ 305


HSP 2 Score: 65.9 bits (159), Expect = 4.9e-11
Identity = 60/225 (26.67%), Postives = 90/225 (40.00%), Query Frame = 1

Query: 101 TLWIGDLQPWMDETYLNNCFA-HTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQ 160
           ++++GDL P + +  L   FA     V   KV+ +  TG+S+GYGFV F       + + 
Sbjct: 214 SIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMT 273

Query: 161 NYNGTIMPNTELPFRLNWAT---------------------FSANDRRPDTGSDLS-IFV 220
             NG    + ++  R+  AT                        N    D  S+ S IFV
Sbjct: 274 EMNGAFCSSRQM--RVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSMSDGESNNSTIFV 333

Query: 221 GDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNG 280
           G L ADVT+  L + FS  +  V   K+ +       KG GFV+F +      A+  +NG
Sbjct: 334 GGLDADVTEEDLMQPFSD-FGEVVSVKIPV------GKGCGFVQFANRQSAEEAIGNLNG 393

Query: 281 IYCSSRPMRIGVA-TPKK----------------ASGYQQGYASQ 286
                  +R+    +P K                  GY  GYA+Q
Sbjct: 394 TVIGKNTVRLSWGRSPNKQWRSDSGNQWNGGYSRGQGYNNGYANQ 429

BLAST of Cucsa.085240 vs. TAIR10
Match: AT1G47500.1 (AT1G47500.1 RNA-binding protein 47C')

HSP 1 Score: 271.9 bits (694), Expect = 4.5e-73
Identity = 154/287 (53.66%), Postives = 183/287 (63.76%), Query Frame = 1

Query: 6   NGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMVMYPPQHYMAYSHHP 65
           N    +P  P PH  W             M+YP   M  M      MY P   M +S  P
Sbjct: 39  NQPKTSPTPPPPH--W-------------MRYPPVLMPQM------MYAPPPPMPFS--P 98

Query: 66  YQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTD-EVKTLWIGDLQPWMDETYLNNCF--AH 125
           Y Q               H QS+  + Q + + E KT+W+GDLQ WMDE YLN+ F  A 
Sbjct: 99  YHQYPNHHHF--------HHQSRGNKHQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAE 158

Query: 126 TGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATFSA 185
             E+ S+KVI NK  G SEGYGFVEF SH  A+KVLQ +NG  MPNT+ PFRLNWA+FS 
Sbjct: 159 EREIVSLKVIRNKHNGSSEGYGFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWASFST 218

Query: 186 NDRR-PDTGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVR 245
            ++R  + G DLSIFVGDLA DV+DA+L ETFS +Y SVK AKVV+D+N+GRSKGYGFVR
Sbjct: 219 GEKRLENNGPDLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVR 278

Query: 246 FGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQ--GYASQG 287
           FGDENERT+AMTEMNG+ CSSR MRIG ATP+K +GYQQ  GY   G
Sbjct: 279 FGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQQGGYMPSG 294


HSP 2 Score: 64.7 bits (156), Expect = 1.1e-10
Identity = 51/205 (24.88%), Postives = 88/205 (42.93%), Query Frame = 1

Query: 101 TLWIGDLQPWMDETYLNNCFAHT-GEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQ 160
           ++++GDL P + +  L+  F+     V + KV+ +  TG+S+GYGFV F       K + 
Sbjct: 200 SIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMT 259

Query: 161 NYNGTIMPNTEL------PFRLN-------WATFSANDRRPDTGSDLSIFVGDLAADVTD 220
             NG    +  +      P + N       +    A  R      + +IFVG L + VTD
Sbjct: 260 EMNGVKCSSRAMRIGPATPRKTNGYQQQGGYMPSGAFTRSEGDTINTTIFVGGLDSSVTD 319

Query: 221 AILQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRPMR 280
             L++ F S +  +   K+ +       KG GFV+F +      A+ ++NG     + +R
Sbjct: 320 EDLKQPF-SEFGEIVSVKIPV------GKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVR 379

Query: 281 IGVATPKKASGYQQGYASQGNGPLY 292
           +           +  Y +Q   P Y
Sbjct: 380 LSWGRNPANKQPRDKYGNQWVDPYY 397

BLAST of Cucsa.085240 vs. TAIR10
Match: AT1G47490.1 (AT1G47490.1 RNA-binding protein 47C)

HSP 1 Score: 267.3 bits (682), Expect = 1.1e-71
Identity = 146/291 (50.17%), Postives = 185/291 (63.57%), Query Frame = 1

Query: 9   DLNPQAPHPHHQWFQQQQQYQQQWMA------MQYPAAAMAMMHQQQMVMYPPQHYMAYS 68
           D  P  P P  Q   ++++ Q +         M+YP   + + HQ   +MY P  +  Y 
Sbjct: 20  DNQPPPPPPPPQQPAKEEENQPKTSPTPPPHWMRYPPTVI-IPHQ---MMYAPPPFPPYH 79

Query: 69  HHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCFAH 128
            +P       Q + +  Q   + ++            KT+W+GDL  WMDE YLN+ FA 
Sbjct: 80  QYPNHHHLHHQSRGNKHQNAFNGEN------------KTIWVGDLHHWMDEAYLNSSFAS 139

Query: 129 TGE--VSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATF 188
             E  + SVKVI NK  G SEGYGFVEF SH  A+KVL+ +NGT MPNT+ PFRLNWA+F
Sbjct: 140 GDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNWASF 199

Query: 189 SANDRR-PDTGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGF 248
           S  ++R  + G DLSIFVGDL+ DV+D +L ETFS +Y SVK AKVV+D+N+GRSKGYGF
Sbjct: 200 STGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGF 259

Query: 249 VRFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQGNGPL 291
           VRFGDENERT+AMTEMNG+ CSSR MRIG ATP+K +GYQQ      NG L
Sbjct: 260 VRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQQGGYMPNGTL 294


HSP 2 Score: 62.8 bits (151), Expect = 4.1e-10
Identity = 50/207 (24.15%), Postives = 88/207 (42.51%), Query Frame = 1

Query: 101 TLWIGDLQPWMDETYLNNCFAHT-GEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQ 160
           ++++GDL P + +  L+  F+     V + KV+ +  TG+S+GYGFV F       K + 
Sbjct: 198 SIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMT 257

Query: 161 NYNGTIMPNTELPFRLNWATFSANDRRPDTGS---------------DLSIFVGDLAADV 220
             NG    +  +  R+  AT    +     G                + +IFVG L + V
Sbjct: 258 EMNGVKCSSRAM--RIGPATPRKTNGYQQQGGYMPNGTLTRPEGDIMNTTIFVGGLDSSV 317

Query: 221 TDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRP 280
           TD  L++ F + +  +   K+ +       KG GFV+F +      A+ ++NG     + 
Sbjct: 318 TDEDLKQPF-NEFGEIVSVKIPV------GKGCGFVQFVNRPNAEEALEKLNGTVIGKQT 377

Query: 281 MRIGVATPKKASGYQQGYASQGNGPLY 292
           +R+           +  Y +Q   P Y
Sbjct: 378 VRLSWGRNPANKQPRDKYGNQWVDPYY 395

BLAST of Cucsa.085240 vs. TAIR10
Match: AT4G27000.1 (AT4G27000.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 263.5 bits (672), Expect = 1.6e-70
Identity = 147/278 (52.88%), Postives = 170/278 (61.15%), Query Frame = 1

Query: 1   MAQP---SNGADLNP-QAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMVMYPPQ 60
           M QP   SNGA   P Q P     + QQQQ     WM          M HQQQ    PP 
Sbjct: 2   MQQPPPASNGAATGPGQIPSDQQAYLQQQQS----WM----------MQHQQQQQGQPPA 61

Query: 61  HYMAYSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYL 120
            +            QQ    S Q QQQ       +  GS  E+++LWIGDLQPWMDE YL
Sbjct: 62  GW-----------NQQSAPSSGQPQQQQYGGGGSQNPGSAGEIRSLWIGDLQPWMDENYL 121

Query: 121 NNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLN 180
            N F  TGE ++ KVI NKQ G SEGYGF+EF +H TAE+ LQ YNG  MP++E  FRLN
Sbjct: 122 MNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQTYNGAPMPSSEQAFRLN 181

Query: 181 WATFSANDRRPDTGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKG 240
           WA   A +RR   G + ++FVGDLA DVTD +L ETF + Y+SVKGAKVV D  +GRSKG
Sbjct: 182 WAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKG 241

Query: 241 YGFVRFGDENERTRAMTEMNGIYCSSRPMRIGVATPKK 275
           YGFVRF DE+E+ RAMTEMNG YCSSRPMR G A  KK
Sbjct: 242 YGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAANKK 254

BLAST of Cucsa.085240 vs. NCBI nr
Match: gi|778669135|ref|XP_004145357.2| (PREDICTED: polyadenylate-binding protein RBP47 [Cucumis sativus])

HSP 1 Score: 595.9 bits (1535), Expect = 3.8e-167
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 1

Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMVMYPPQHYMA 60
           MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMVMYPPQHYMA
Sbjct: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMVMYPPQHYMA 60

Query: 61  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF 120
           YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF
Sbjct: 61  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF 120

Query: 121 AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATF 180
           AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATF
Sbjct: 121 AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATF 180

Query: 181 SANDRRPDTGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV 240
           SANDRRPDTGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV
Sbjct: 181 SANDRRPDTGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV 240

Query: 241 RFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQ 286
           RFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQ
Sbjct: 241 RFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQ 285

BLAST of Cucsa.085240 vs. NCBI nr
Match: gi|659118615|ref|XP_008459212.1| (PREDICTED: polyadenylate-binding protein RBP47 [Cucumis melo])

HSP 1 Score: 591.7 bits (1524), Expect = 7.2e-166
Identity = 282/285 (98.95%), Postives = 284/285 (99.65%), Query Frame = 1

Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMVMYPPQHYMA 60
           MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQM+MYPPQHYMA
Sbjct: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMA 60

Query: 61  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF 120
           YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF
Sbjct: 61  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF 120

Query: 121 AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATF 180
           AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATF
Sbjct: 121 AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATF 180

Query: 181 SANDRRPDTGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV 240
           SANDRRPDTGSDLSIFVGDLAADVTDA+LQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV
Sbjct: 181 SANDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV 240

Query: 241 RFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQ 286
           RFGDENERTRAM EMNGIYCSSRPMRIGVATPKKASGYQQGYASQ
Sbjct: 241 RFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQ 285

BLAST of Cucsa.085240 vs. NCBI nr
Match: gi|645262115|ref|XP_008236618.1| (PREDICTED: polyadenylate-binding protein RBP47-like isoform X2 [Prunus mume])

HSP 1 Score: 410.2 bits (1053), Expect = 3.0e-111
Identity = 212/311 (68.17%), Postives = 235/311 (75.56%), Query Frame = 1

Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQ-------YQQQWMAMQYPAAAMAMMHQQQMVMY 60
           MAQ SNG DL  Q      Q  QQQQQ       +QQQWMAMQYPAAAMAMM QQ MV  
Sbjct: 1   MAQQSNGGDLGTQQQQQQQQQQQQQQQQWMHQHQHQQQWMAMQYPAAAMAMMQQQMMVY- 60

Query: 61  PPQHYMAYS----------HHPYQQQ------QQQQQQPSSQQQQQHAQSQRPRRQGSTD 120
            PQHYM Y+          H+PYQQQ      QQQQQQP  Q QQ  +Q     +QG TD
Sbjct: 61  -PQHYMPYAAAAGHPHHPHHNPYQQQPQGVPYQQQQQQPPKQLQQSPSQ-----KQGPTD 120

Query: 121 EVKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKV 180
           E++T+W+GDL  WMDETYL+ CFAHTG+VS+VKVI NKQT QSEGYGFVEFFS   AE+V
Sbjct: 121 EIRTIWVGDLHHWMDETYLHGCFAHTGQVSTVKVIRNKQTAQSEGYGFVEFFSREAAEEV 180

Query: 181 LQNYNGTIMPNTELPFRLNWATFSANDRRPDTGSDLSIFVGDLAADVTDAILQETFSSRY 240
           LQ+YNG  MPNTE PFRLNWATFS  DRR DT SDLSIFVGDLA DVTD +LQETF SRY
Sbjct: 181 LQSYNGAAMPNTEQPFRLNWATFSVGDRRADTSSDLSIFVGDLATDVTDTMLQETFGSRY 240

Query: 241 TSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASG 289
           +SVKGAKVV+D+N+GRSKGYGFVRFGDENER+RA+TEMNG YCSSRPMRIGVATPKK+  
Sbjct: 241 SSVKGAKVVLDANTGRSKGYGFVRFGDENERSRAITEMNGAYCSSRPMRIGVATPKKSPA 300

BLAST of Cucsa.085240 vs. NCBI nr
Match: gi|657999742|ref|XP_008392304.1| (PREDICTED: polyadenylate-binding protein RBP47 [Malus domestica])

HSP 1 Score: 409.1 bits (1050), Expect = 6.6e-111
Identity = 214/299 (71.57%), Postives = 235/299 (78.60%), Query Frame = 1

Query: 1   MAQPSNG-ADLN-PQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMVMYPPQHY 60
           MAQ SNG +DL  PQ      Q  QQQ  +QQQWMAMQYPAAAMAMM QQ MV   PQHY
Sbjct: 1   MAQQSNGGSDLGTPQHQQQQQQHHQQQWMHQQQWMAMQYPAAAMAMMQQQMMVY--PQHY 60

Query: 61  MAYS---HHP----YQQQQQ-----QQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGD 120
           M Y    HHP    YQQQ Q     QQQQP  Q QQQ + SQ+   QG  DEV+T+W+GD
Sbjct: 61  MPYGAAPHHPHPNPYQQQPQAVAYQQQQQPPKQLQQQQSPSQK---QGPNDEVRTIWVGD 120

Query: 121 LQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIM 180
           L  WMDETYL+ CFAHTG+VSS+KVI NKQTGQSEGYGFVEF+S   AE+VLQNYNGT M
Sbjct: 121 LHHWMDETYLHGCFAHTGQVSSIKVIRNKQTGQSEGYGFVEFYSREAAEEVLQNYNGTAM 180

Query: 181 PNTELPFRLNWATFSANDRRPDTGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVV 240
           PNTE PFRLNWATFSA DRR DT +DLSIFVGDLA DVTD +LQETFSSRY+SVKGAKVV
Sbjct: 181 PNTEQPFRLNWATFSAGDRRADTSADLSIFVGDLATDVTDTMLQETFSSRYSSVKGAKVV 240

Query: 241 IDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQ 286
           +D+N+GRSKGYGFVRFGDENER+RA+ EMNG YCSSR MRIGVATPKKA  YQQ Y+SQ
Sbjct: 241 LDANTGRSKGYGFVRFGDENERSRAIAEMNGAYCSSRAMRIGVATPKKAPAYQQQYSSQ 294

BLAST of Cucsa.085240 vs. NCBI nr
Match: gi|645262113|ref|XP_008236617.1| (PREDICTED: polyadenylate-binding protein RBP47-like isoform X1 [Prunus mume])

HSP 1 Score: 407.9 bits (1047), Expect = 1.5e-110
Identity = 211/308 (68.51%), Postives = 234/308 (75.97%), Query Frame = 1

Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQ-------YQQQWMAMQYPAAAMAMMHQQQMVMY 60
           MAQ SNG DL  Q      Q  QQQQQ       +QQQWMAMQYPAAAMAMM QQ MV  
Sbjct: 1   MAQQSNGGDLGTQQQQQQQQQQQQQQQQWMHQHQHQQQWMAMQYPAAAMAMMQQQMMVY- 60

Query: 61  PPQHYMAYS----------HHPYQQQ------QQQQQQPSSQQQQQHAQSQRPRRQGSTD 120
            PQHYM Y+          H+PYQQQ      QQQQQQP  Q QQ  +Q     +QG TD
Sbjct: 61  -PQHYMPYAAAAGHPHHPHHNPYQQQPQGVPYQQQQQQPPKQLQQSPSQ-----KQGPTD 120

Query: 121 EVKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKV 180
           E++T+W+GDL  WMDETYL+ CFAHTG+VS+VKVI NKQT QSEGYGFVEFFS   AE+V
Sbjct: 121 EIRTIWVGDLHHWMDETYLHGCFAHTGQVSTVKVIRNKQTAQSEGYGFVEFFSREAAEEV 180

Query: 181 LQNYNGTIMPNTELPFRLNWATFSANDRRPDTGSDLSIFVGDLAADVTDAILQETFSSRY 240
           LQ+YNG  MPNTE PFRLNWATFS  DRR DT SDLSIFVGDLA DVTD +LQETF SRY
Sbjct: 181 LQSYNGAAMPNTEQPFRLNWATFSVGDRRADTSSDLSIFVGDLATDVTDTMLQETFGSRY 240

Query: 241 TSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASG 286
           +SVKGAKVV+D+N+GRSKGYGFVRFGDENER+RA+TEMNG YCSSRPMRIGVATPKK+  
Sbjct: 241 SSVKGAKVVLDANTGRSKGYGFVRFGDENERSRAITEMNGAYCSSRPMRIGVATPKKSPA 300

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RB47B_ARATH6.9e-10064.19Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana GN=RBP47B PE=2 SV=1[more]
RB47A_ARATH1.3e-9866.79Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana GN=RBP47A PE=2 SV=1[more]
RBP47_NICPL3.5e-9661.62Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia GN=RBP47 PE=1 S... [more]
RBP45_NICPL2.9e-7454.98Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia GN=RBP45 PE=1 S... [more]
R47CP_ARATH7.9e-7253.66Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana GN=RBP47C' PE=2 SV... [more]
Match NameE-valueIdentityDescription
M5VJS3_PRUPE1.3e-11068.73Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005661mg PE=4 SV=1[more]
A0A151UAI9_CAJCA1.8e-11072.03Putative RNA-binding protein C23E6.01c OS=Cajanus cajan GN=KK1_020572 PE=4 SV=1[more]
A0A151UAI9_CAJCA9.0e-0624.39Putative RNA-binding protein C23E6.01c OS=Cajanus cajan GN=KK1_020572 PE=4 SV=1[more]
F6HQD9_VITVI6.0e-0228.57Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g00850 PE=4 SV=... [more]
A0A0D2R7U8_GOSRA6.7e-11072.22Uncharacterized protein OS=Gossypium raimondii GN=B456_008G025400 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G19130.13.9e-10164.19 RNA-binding protein 47B[more]
AT1G49600.17.3e-10066.79 RNA-binding protein 47A[more]
AT1G47500.14.5e-7353.66 RNA-binding protein 47C'[more]
AT1G47490.11.1e-7150.17 RNA-binding protein 47C[more]
AT4G27000.11.6e-7052.88 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
Match NameE-valueIdentityDescription
gi|778669135|ref|XP_004145357.2|3.8e-167100.00PREDICTED: polyadenylate-binding protein RBP47 [Cucumis sativus][more]
gi|659118615|ref|XP_008459212.1|7.2e-16698.95PREDICTED: polyadenylate-binding protein RBP47 [Cucumis melo][more]
gi|645262115|ref|XP_008236618.1|3.0e-11168.17PREDICTED: polyadenylate-binding protein RBP47-like isoform X2 [Prunus mume][more]
gi|657999742|ref|XP_008392304.1|6.6e-11171.57PREDICTED: polyadenylate-binding protein RBP47 [Malus domestica][more]
gi|645262113|ref|XP_008236617.1|1.5e-11068.51PREDICTED: polyadenylate-binding protein RBP47-like isoform X1 [Prunus mume][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.085240.1Cucsa.085240.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 102..171
score: 2.4E-15coord: 195..265
score: 1.5
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 101..174
score: 2.6E-14coord: 194..268
score: 7.2
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 100..180
score: 14.436coord: 193..272
score: 16
IPR012677Nucleotide-binding alpha-beta plait domainGENE3DG3DSA:3.30.70.330coord: 65..178
score: 5.0E-24coord: 183..286
score: 5.4
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 175..288
score: 2.71E-23coord: 64..184
score: 1.49
NoneNo IPR availablePANTHERPTHR24012FAMILY NOT NAMEDcoord: 170..280
score: 3.0
NoneNo IPR availablePANTHERPTHR24012:SF403POLYADENYLATE-BINDING PROTEIN RBP47Acoord: 170..280
score: 3.0