Carg24057 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24057
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Polyadenylate-binding protein
Location	Cucurbita_argyrosperma_scaffold_166 : 311035 .. 314065 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCAGCCTTCCAACGCTGCTGATCTCAATCCTCAAGCCCCTCACCCTCACCATCAATGGTATCAACAACAACGACAGTATCAGCAGCAATGGATGGCGGTGCAGTACCCTGCCGCCGCCATGGCCATGATGCAACAACAGCAGATGATGATGTATCCTCCTCAGCATTACGTGGCGTATTCTCACCATCCTTATCAACAGCAGCAACAGCCACAGCAGCAGCCACCGCCGTCGCAGCAGCAGCAGCAGCAACAGCAGCAACAGCAGCAACCTCAGTCGCAGCGACCTCGCAGACAGGGGTCAACGGACGACGTTAAGACGCTTTGGATTGGTGACCTTCAGGCCTGGATGGACGAGACCTATCTCCATAACTGTTTCGCTCACACCGGCGAGGTCTAACTTGCTTATCGTATCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTCTTAACGAATCTCTATCTGTAATTTTTCCTTGATTTTTTCCTGTTAGATCGTTTTGAGACTTTCTGTAGTGAGATCGATCGCATTTCTTTACTTTTTTTTTCTCGCGCTTACGCGTTCTTGAATTGATTTGAAGTTTGTGAATCTGTGGTCGTCGACATTATCATTGCTGCATCTTCTATTGTCCTGCAATTGAAATGGTGGTCCAAAGCGAGTCTACCCAACACGAGAAGAATTGTTACTAAAGAGGCAAATTTTAGATTGATTTATTTTTGTATGAGCATCTCTCTTTTTCCAGCGATAAACTCAAGAAGGACTTGCACTAGTAATTTTAGTTTTAGAGTGTGCTTTTCTTATTACTATTCCTCTGTCCTAGTTTTGACACTTCAATTATCCTTGCAATCTTAATGATGGAGACAATCAGATCACAAGTAATTTATGTGTAATGAGTGAAATCTTGGTCCCCAACTAGTAATTGCTATTTCACTATTAGTTTAGATGGTCTGTACTGAGGTTAGGTTGTTTAGCTCTACTAAGTTGAGATTACAACTTTGGAATAACATATACCCGGTATTCTTTTCTGAGTTTCTTGTTTTAAAATAATTTGTAGCTGAATTTCTTCAAAATGATTGGTTCTTGGTGTCATTGTTTGCAATTTTGAATGAATTAGTGTGCATGCTAATATATGATTTCCATATATCTTATTTCACTGTGCAACATTTCTAAGTGACAATTGGTTACTTCTGATTTTTACTGGCAACGTTTAGATGGATTAGCTGCAGACTGTGTTTTATGTTTCCTCTTGTATGAATCGATCTCCATCAAGAGCATCTTTTTTGGTCATCAGTTGACTGAACTGTTTCTCTTCCTTTTGCTTCATGAACACGCAGGTTTTCTCGGTTAAGGTCATATGCAATAAGCAAACTGGTCAATCTGAGGGCTATGGATTTGTTGAGTTCTATTCACATGCAACAGCTGATAAAGTGTTGCAGAACTATAATGGTGCTATGATGCCAAACACAGATCTGCCTTTCCGTCTCAATTGGGCAACCTTTAGTGGAAATGATAGGCGACCGGACACTGGTTCTGACCTATCTATATTTGTTGGTGATTTGGCTGCTGATGTAACTGATGCTATGCTGCAAGAAACTTTCTCTAGTAAATACACATCTGTTAAAGGAGCAAAGGTGGTTATTGATTCAAATTCAGGGCGTTCAAAGGGTTATGGATTTGTCAGGTTTGGTGATGAAAATGAAAAGTCCAGGGCTATGACTGAAATGAATGGGATATATTGTTCAAGTAGACCCATGCGCATTGGTGTTGCAACACCAAAGAAAGCATCTGGATATCAACAAGGTTATTCTTCACAGGGTTAGTATTGGTTCGCTTCTGGCATCACTGCTGGATGTTGTTGTTTATTGATCTATTATTCAGTTTTTCATGCTTTTGGTGACATTATTCTTTATTATGGGACATCCAAGTTGGAGTGTATTTCATCTTTTTGGTACTGTGTTTTTCTGGATGGCAAGTTTCTTTTTTCTTTTTATCTTTCTCCTCCTGGTGCAATGATAAGTGAAGCATTATTTTCAAGAAGTTTATGGAACCAGCTGGCAGTATTAATGTTTTTGGCTGTATGTCAACTAGAAGACTAGAAGTTTAATATTTCCACCTGACATGTGCATGGTTCTTTAGCATCTGTCCCAGTAATATTTTCTTTTTTCATGAATGGGTTTTAGACATTGGCATAATGAACATGGGTTTTGTTAGGCCTCCAATTGTGAATGTTTATTCTAGGCAGGGTAGGGAATGGAAAGAATAGTTAGTTAGCTGTGGAGCATTTTTTGCCTTTTTAGTGTGGGGAGGTAGTAAGGAACGTTTTATGAGATATCTTGGGAATTGTGGAGCATTTTTGTAGAGATCGACCCTCTTGAATTAGCTAGGAATCTTATATGGTGATATTATCACTCTGTCTACTTTAACATAAATAAACGATCCCAGATACCTATAAGATTTGCATTCTACCTCTTGTGTAGAAGATGTTATAATGATTGATTTATTTCTTAGTTATAAGGTAAGGTGTGAGTAAAATGCAGTTAATATGTTAACTCGTTTTTGAGATGAGATATTAATTGGATGCCTATTTCTGTTTTTCTTTAAAATTTTGTTTAGCTTTAGTTCTGGCTGGTGGACATGCAAATGGCATGGCTGTTCAGGGACCACAAGATGGCGAGTCGAACAACACGACTGTTAGTTTATTCCTTCCTGTCTCAATACTATTTTTTTTTTTCCGGCTAATACATACCTTACCAACTTGTTCTACTTCAGATATTTGTTGGCGGCCTTGATTCTGATGTTAGTGATGAAGATCTCAAGCAAACTTTCTCTAAATTTGGTGAGATTGTCTCTGTGAAAATTCCTATTGGAAAGGGATGTGGATTTGTGCAGTTTGCCAACAGGTATTCTTCTTATTTTTCTGTGGAGCTTTCTGTCGTTAAATATGCAGCTTCTATTGCCGATCTTTACATCTCGCAAGTAATTAGAGGTTACAAAAAGGCAAGGTCACTGGTCAAGTTGGATTGA

mRNA sequence

ATGGCCCAGCCTTCCAACGCTGCTGATCTCAATCCTCAAGCCCCTCACCCTCACCATCAATGGTATCAACAACAACGACAGTATCAGCAGCAATGGATGGCGGTGCAGTACCCTGCCGCCGCCATGGCCATGATGCAACAACAGCAGATGATGATGTATCCTCCTCAGCATTACGTGGCGTATTCTCACCATCCTTATCAACAGCAGCAACAGCCACAGCAGCAGCCACCGCCGTCGCAGCAGCAGCAGCAGCAACAGCAGCAACAGCAGCAACCTCAGTCGCAGCGACCTCGCAGACAGGGGTCAACGGACGACGTTAAGACGCTTTGGATTGGTGACCTTCAGGCCTGGATGGACGAGACCTATCTCCATAACTGTTTCGCTCACACCGGCGAGGTTTTCTCGGTTAAGGTCATATGCAATAAGCAAACTGGTCAATCTGAGGGCTATGGATTTGTTGAGTTCTATTCACATGCAACAGCTGATAAAGTGTTGCAGAACTATAATGGTGCTATGATGCCAAACACAGATCTGCCTTTCCGTCTCAATTGGGCAACCTTTAGTGGAAATGATAGGCGACCGGACACTGGTTCTGACCTATCTATATTTGTTGGTGATTTGGCTGCTGATGTAACTGATGCTATGCTGCAAGAAACTTTCTCTAGTAAATACACATCTGTTAAAGGAGCAAAGGTGGTTATTGATTCAAATTCAGGGCGTTCAAAGGGTTATGGATTTGTCAGGTTTGGTGATGAAAATGAAAAGTCCAGGGCTATGACTGAAATGAATGGGATATATTGTTCAAGTAGACCCATGCGCATTGGTGTTGCAACACCAAAGAAAGCATCTGGATATCAACAAGGTTATTCTTCACAGGCTTTAGTTCTGGCTGGTGGACATGCAAATGGCATGGCTGTTCAGGGACCACAAGATGGCGAGTCGAACAACACGACTATATTTGTTGGCGGCCTTGATTCTGATGTTAGTGATGAAGATCTCAAGCAAACTTTCTCTAAATTTGGTGAGATTGTCTCTGTGAAAATTCCTATTGGAAAGGGATGTGGATTTGTGCAGTTTGCCAACAGGTATTCTTCTTATTTTTCTGTGGAGCTTTCTGTCGTTAAATATGCAGCTTCTATTGCCGATCTTTACATCTCGCAAGTAATTAGAGGTTACAAAAAGGCAAGGTCACTGGTCAAGTTGGATTGA

Coding sequence (CDS)

ATGGCCCAGCCTTCCAACGCTGCTGATCTCAATCCTCAAGCCCCTCACCCTCACCATCAATGGTATCAACAACAACGACAGTATCAGCAGCAATGGATGGCGGTGCAGTACCCTGCCGCCGCCATGGCCATGATGCAACAACAGCAGATGATGATGTATCCTCCTCAGCATTACGTGGCGTATTCTCACCATCCTTATCAACAGCAGCAACAGCCACAGCAGCAGCCACCGCCGTCGCAGCAGCAGCAGCAGCAACAGCAGCAACAGCAGCAACCTCAGTCGCAGCGACCTCGCAGACAGGGGTCAACGGACGACGTTAAGACGCTTTGGATTGGTGACCTTCAGGCCTGGATGGACGAGACCTATCTCCATAACTGTTTCGCTCACACCGGCGAGGTTTTCTCGGTTAAGGTCATATGCAATAAGCAAACTGGTCAATCTGAGGGCTATGGATTTGTTGAGTTCTATTCACATGCAACAGCTGATAAAGTGTTGCAGAACTATAATGGTGCTATGATGCCAAACACAGATCTGCCTTTCCGTCTCAATTGGGCAACCTTTAGTGGAAATGATAGGCGACCGGACACTGGTTCTGACCTATCTATATTTGTTGGTGATTTGGCTGCTGATGTAACTGATGCTATGCTGCAAGAAACTTTCTCTAGTAAATACACATCTGTTAAAGGAGCAAAGGTGGTTATTGATTCAAATTCAGGGCGTTCAAAGGGTTATGGATTTGTCAGGTTTGGTGATGAAAATGAAAAGTCCAGGGCTATGACTGAAATGAATGGGATATATTGTTCAAGTAGACCCATGCGCATTGGTGTTGCAACACCAAAGAAAGCATCTGGATATCAACAAGGTTATTCTTCACAGGCTTTAGTTCTGGCTGGTGGACATGCAAATGGCATGGCTGTTCAGGGACCACAAGATGGCGAGTCGAACAACACGACTATATTTGTTGGCGGCCTTGATTCTGATGTTAGTGATGAAGATCTCAAGCAAACTTTCTCTAAATTTGGTGAGATTGTCTCTGTGAAAATTCCTATTGGAAAGGGATGTGGATTTGTGCAGTTTGCCAACAGGTATTCTTCTTATTTTTCTGTGGAGCTTTCTGTCGTTAAATATGCAGCTTCTATTGCCGATCTTTACATCTCGCAAGTAATTAGAGGTTACAAAAAGGCAAGGTCACTGGTCAAGTTGGATTGA

Protein sequence

MAQPSNAADLNPQAPHPHHQWYQQQRQYQQQWMAVQYPAAAMAMMQQQQMMMYPPQHYVAYSHHPYQQQQQPQQQPPPSQQQQQQQQQQQQPQSQRPRRQGSTDDVKTLWIGDLQAWMDETYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLNWATFSGNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQGPQDGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQFANRYSSYFSVELSVVKYAASIADLYISQVIRGYKKARSLVKLD

Homology

[Close]

BLAST of Carg24057 vs. NCBI nr
Match: XP_022947439.1 (polyadenylate-binding protein RBP47-like [Cucurbita moschata])

HSP 1 Score: 533.9 bits (1374), Expect = 4.8e-148
Identity = 354/370 (95.68%), Postives = 359/370 (97.03%), Query Frame = 0


Query: 1   MAQPSNAADLNPQAPHPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAQPSNAADLNPQ PHPH      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAQPSNAADLNPQTPHPH------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTDDVKTLWIGDLQAWMDE 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTDDVKTLWIGDLQAWMDE
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTDDVKTLWIGDLQAWMDE 120

Query: 121 TYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPF 180
           TYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPF
Sbjct: 121 TYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPF 180

Query: 181 RLNWATFSGNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGR 240
           RLNWATFSGNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGR
Sbjct: 181 RLNWATFSGNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGR 240

Query: 241 SKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGH 300
           SKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGH
Sbjct: 241 SKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGH 300

Query: 301 ANGMAVQGPQDGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQFA 360
           ANGMAVQGPQDGESNNTTIFVGGLDSDVSDEDLKQ FSKFGEIVSVKIPIGKGCGFVQFA
Sbjct: 301 ANGMAVQGPQDGESNNTTIFVGGLDSDVSDEDLKQPFSKFGEIVSVKIPIGKGCGFVQFA 360

Query: 361 NRYSSYFSVE 371
           NR ++  +++
Sbjct: 361 NRKNAEDAIQ 364

[Close]

BLAST of Carg24057 vs. NCBI nr
Match: XP_023533349.1 (polyadenylate-binding protein RBP47 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 533.9 bits (1374), Expect = 4.8e-148
Identity = 353/370 (95.41%), Postives = 358/370 (96.76%), Query Frame = 0


Query: 1   MAQPSNAADLNPQAPHPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAQPSNAADLNPQAPHPH       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAQPSNAADLNPQAPHPH-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTDDVKTLWIGDLQAWMDE 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTDDVKTLWIGDLQ WMDE
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTDDVKTLWIGDLQGWMDE 120

Query: 121 TYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPF 180
           TYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPF
Sbjct: 121 TYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPF 180

Query: 181 RLNWATFSGNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGR 240
           RLNWATFSGNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGR
Sbjct: 181 RLNWATFSGNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGR 240

Query: 241 SKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGH 300
           SKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGH
Sbjct: 241 SKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGH 300

Query: 301 ANGMAVQGPQDGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQFA 360
           ANGMAVQGPQDGESNNTTIFVGGLDSDVSDEDLKQ FSKFGEIVSVKIPIGKGCGFVQFA
Sbjct: 301 ANGMAVQGPQDGESNNTTIFVGGLDSDVSDEDLKQPFSKFGEIVSVKIPIGKGCGFVQFA 360

Query: 361 NRYSSYFSVE 371
           NR ++  +++
Sbjct: 361 NRKNAEDAIQ 363

[Close]

BLAST of Carg24057 vs. NCBI nr
Match: XP_023007482.1 (polyadenylate-binding protein RBP47-like [Cucurbita maxima])

HSP 1 Score: 529.3 bits (1362), Expect = 1.2e-146
Identity = 357/371 (96.23%), Postives = 362/371 (97.57%), Query Frame = 0


Query: 1   MAQPSNAADLNPQAPHPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAQPSN ADLNPQAPHPH   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAQPSNGADLNPQAPHPH---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTDDVKTLWIGDLQAWMDE 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTDDVKTLWIGDLQAWMDE
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTDDVKTLWIGDLQAWMDE 120

Query: 121 TYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPF 180
           TYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPF
Sbjct: 121 TYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPF 180

Query: 181 RLNWATFSGNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGR 240
           RLNWATFSGNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGR
Sbjct: 181 RLNWATFSGNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGR 240

Query: 241 SKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGH 300
           SKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGH
Sbjct: 241 SKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGH 300

Query: 301 ANGMAVQGPQ-DGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQF 360
           ANGMAVQGPQ DGESNNTTIFVGGLDSDVSDEDLKQ FSKFGEIVSVKIPIGKGCGFVQF
Sbjct: 301 ANGMAVQGPQSDGESNNTTIFVGGLDSDVSDEDLKQPFSKFGEIVSVKIPIGKGCGFVQF 360

Query: 361 ANRYSSYFSVE 371
           ANR ++  +++
Sbjct: 361 ANRKNAEDAIQ 368

[Close]

BLAST of Carg24057 vs. NCBI nr
Match: XP_023512881.1 (polyadenylate-binding protein RBP47B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 510.4 bits (1313), Expect = 5.7e-141
Identity = 336/364 (92.31%), Postives = 345/364 (94.78%), Query Frame = 0


Query: 1   MAQPSNAADLNPQAPHPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAQPSN ADLNPQAPHPH            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAQPSNGADLNPQAPHPH-----------QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTDDVKTLWIGDLQAWMDE 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GSTD+VKTLWIGDLQ WMDE
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGSTDEVKTLWIGDLQPWMDE 120

Query: 121 TYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPF 180
           TYLHNCFAH GEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQ+YNGA+MPNTDLPF
Sbjct: 121 TYLHNCFAHIGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQSYNGAIMPNTDLPF 180

Query: 181 RLNWATFSGNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGR 240
           RLNWATFSG+DRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGR
Sbjct: 181 RLNWATFSGSDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGR 240

Query: 241 SKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGH 300
           SKGYGFVRFGDE+E++RA+TEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGH
Sbjct: 241 SKGYGFVRFGDESERTRAVTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGH 300

Query: 301 ANGMAVQGPQ-DGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQF 360
           ANGMAVQG Q DGESNNTTIFVGGLDSDVSDEDL+Q FSKFGEIVSVKIPIGKGCGFVQF
Sbjct: 301 ANGMAVQGSQSDGESNNTTIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQF 353

Query: 361 ANRY 364
           ANRY
Sbjct: 361 ANRY 353

[Close]

BLAST of Carg24057 vs. NCBI nr
Match: XP_022943942.1 (polyadenylate-binding protein RBP47-like [Cucurbita moschata])

HSP 1 Score: 510.0 bits (1312), Expect = 7.4e-141
Identity = 335/371 (90.30%), Postives = 348/371 (93.80%), Query Frame = 0


Query: 1   MAQPSNAADLNPQAPHPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAQPSN ADLNPQAPHPH             XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAQPSNGADLNPQAPHPH------------QXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTDDVKTLWIGDLQAWMDE 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GSTD+VKTLWIGDLQ WMDE
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGSTDEVKTLWIGDLQPWMDE 120

Query: 121 TYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPF 180
           TYLHNCFAH GEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGA+MPNTDLPF
Sbjct: 121 TYLHNCFAHIGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTDLPF 180

Query: 181 RLNWATFSGNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGR 240
           RLNWATFSG+DRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGR
Sbjct: 181 RLNWATFSGSDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGR 240

Query: 241 SKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGH 300
           SKGYGFVRFGDE+E++RA+TEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGH
Sbjct: 241 SKGYGFVRFGDESERTRAVTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGH 300

Query: 301 ANGMAVQGPQ-DGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQF 360
           ANGMAVQG Q DGESNNTTIFVGGLDSDVSDEDL+Q FSKFGEIVSVKIPIGKGCGFVQF
Sbjct: 301 ANGMAVQGSQSDGESNNTTIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQF 359

Query: 361 ANRYSSYFSVE 371
           ANR ++  +++
Sbjct: 361 ANRKNAEDAIQ 359

[Close]

BLAST of Carg24057 vs. TAIR10
Match: AT3G19130.1 (RNA-binding protein 47B)

HSP 1 Score: 390.2 bits (1001), Expect = 1.5e-108
Identity = 192/273 (70.33%), Postives = 228/273 (83.52%), Query Frame = 0


Query: 101 GSTDDVKTLWIGDLQAWMDETYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHAT 160
           GS DDVKTLW+GDL  WMDETYLH+CF+HTGEV SVKVI NK T QSEGYGFVEF S A 
Sbjct: 102 GSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAA 161

Query: 161 ADKVLQNYNGAMMPNTDLPFRLNWATFS-GNDRRPDTGSDLSIFVGDLAADVTDAMLQET 220
           A++VLQNY+G++MPN+D PFR+NWA+FS G  R  + G DLS+FVGDL+ DVTD +L ET
Sbjct: 162 AEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHET 221

Query: 221 FSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATP 280
           FS +Y SVK AKVVIDSN+GRSKGYGFVRFGDENE+SRA+TEMNG YCS+R MR+G+ATP
Sbjct: 222 FSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATP 281

Query: 281 KKASGYQQGYSSQALVLAGGH-ANGMAVQGPQ-DGESNNTTIFVGGLDSDVSDEDLKQTF 340
           K+A   QQ +SSQA++LAGGH +NG    G Q DGES N TIFVGG+D DV DEDL+Q F
Sbjct: 282 KRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPF 341

Query: 341 SKFGEIVSVKIPIGKGCGFVQFANRYSSYFSVE 371
           S+FGE+VSVKIP+GKGCGFVQFA+R S+  ++E
Sbjct: 342 SQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIE 374

[Close]

BLAST of Carg24057 vs. TAIR10
Match: AT1G49600.1 (RNA-binding protein 47A)

HSP 1 Score: 374.4 bits (960), Expect = 8.8e-104
Identity = 184/261 (70.50%), Postives = 215/261 (82.38%), Query Frame = 0


Query: 106 VKTLWIGDLQAWMDETYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVL 165
           VKTLW+GDL  WMDETYLH CF+HT EV SVKVI NKQT QSEGYGFVEF S + A++ L
Sbjct: 118 VKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEAL 177

Query: 166 QNYNGAMMPNTDLPFRLNWATFS-GNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKY 225
           Q+++G  MPN + PFRLNWA+FS G  R  + G DLSIFVGDLA DV+DA+L ETF+ +Y
Sbjct: 178 QSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRY 237

Query: 226 TSVKGAKVVIDSNSGRSKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKASG 285
            SVKGAKVVIDSN+GRSKGYGFVRFGDENE+SRAMTEMNG +CSSR MR+G+ATPK+A+ 
Sbjct: 238 PSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAA 297

Query: 286 YQQGYSSQALVLAGGHANGMAVQGPQDGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIV 345
           Y Q   SQAL LAGGH    ++    DGESNN+TIFVGGLD+DV++EDL Q FS FGE+V
Sbjct: 298 YGQQNGSQALTLAGGHGGNGSM---SDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVV 357

Query: 346 SVKIPIGKGCGFVQFANRYSS 366
           SVKIP+GKGCGFVQFANR S+
Sbjct: 358 SVKIPVGKGCGFVQFANRQSA 375

[Close]

BLAST of Carg24057 vs. TAIR10
Match: AT1G47500.1 (RNA-binding protein 47C')

HSP 1 Score: 339.0 bits (868), Expect = 4.1e-93
Identity = 175/267 (65.54%), Postives = 206/267 (77.15%), Query Frame = 0


Query: 107 KTLWIGDLQAWMDETYLHNCF--AHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKV 166
           KT+W+GDLQ WMDE YL++ F  A   E+ S+KVI NK  G SEGYGFVEF SH  ADKV
Sbjct: 103 KTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVADKV 162

Query: 167 LQNYNGAMMPNTDLPFRLNWATFS-GNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSK 226
           LQ +NGA MPNTD PFRLNWA+FS G  R  + G DLSIFVGDLA DV+DA+L ETFS K
Sbjct: 163 LQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDALLHETFSEK 222

Query: 227 YTSVKGAKVVIDSNSGRSKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKAS 286
           Y SVK AKVV+D+N+GRSKGYGFVRFGDENE+++AMTEMNG+ CSSR MRIG ATP+K +
Sbjct: 223 YPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTN 282

Query: 287 GYQQGYSSQALVLAGGHANGMAVQGPQDGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEI 346
           GYQQ          GG+    A     +G++ NTTIFVGGLDS V+DEDLKQ FS+FGEI
Sbjct: 283 GYQQ---------QGGYMPSGAFT-RSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEI 342

Query: 347 VSVKIPIGKGCGFVQFANRYSSYFSVE 371
           VSVKIP+GKGCGFVQF NR ++  ++E
Sbjct: 343 VSVKIPVGKGCGFVQFVNRPNAEEALE 359

[Close]

BLAST of Carg24057 vs. TAIR10
Match: AT1G47490.1 (RNA-binding protein 47C)

HSP 1 Score: 330.1 bits (845), Expect = 1.9e-90
Identity = 170/267 (63.67%), Postives = 203/267 (76.03%), Query Frame = 0


Query: 107 KTLWIGDLQAWMDETYLHNCFA--HTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKV 166
           KT+W+GDL  WMDE YL++ FA     E+ SVKVI NK  G SEGYGFVEF SH  ADKV
Sbjct: 101 KTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKV 160

Query: 167 LQNYNGAMMPNTDLPFRLNWATFS-GNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSK 226
           L+ +NG  MPNTD PFRLNWA+FS G  R  + G DLSIFVGDL+ DV+D +L ETFS K
Sbjct: 161 LREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEK 220

Query: 227 YTSVKGAKVVIDSNSGRSKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKAS 286
           Y SVK AKVV+D+N+GRSKGYGFVRFGDENE+++AMTEMNG+ CSSR MRIG ATP+K +
Sbjct: 221 YPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTN 280

Query: 287 GYQQGYSSQALVLAGGHANGMAVQGPQDGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEI 346
           GYQQ          GG+     +  P +G+  NTTIFVGGLDS V+DEDLKQ F++FGEI
Sbjct: 281 GYQQ---------QGGYMPNGTLTRP-EGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEI 340

Query: 347 VSVKIPIGKGCGFVQFANRYSSYFSVE 371
           VSVKIP+GKGCGFVQF NR ++  ++E
Sbjct: 341 VSVKIPVGKGCGFVQFVNRPNAEEALE 357

[Close]

BLAST of Carg24057 vs. TAIR10
Match: AT1G11650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 307.0 bits (785), Expect = 1.7e-83
Identity = 156/263 (59.32%), Postives = 193/263 (73.38%), Query Frame = 0


Query: 102 STDDVKTLWIGDLQAWMDETYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATA 161
           + D+++TLWIGDLQ WMDE +L+ CFAHTGE+ S KVI NKQTGQ EGYGF+EF SHA A
Sbjct: 57  TADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAA 116

Query: 162 DKVLQNYNGAMMPN-TDLPFRLNWATFSGNDRRPDTGSDLSIFVGDLAADVTDAMLQETF 221
           ++VLQ +N A +P+  D  FRLNWA+ S  D+R D+  D +IFVGDLAADVTD +L ETF
Sbjct: 117 ERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDS-PDYTIFVGDLAADVTDYILLETF 176

Query: 222 SSKYTSVKGAKVVIDSNSGRSKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPK 281
            + Y SVKGAKVVID  +GR+KGYGFVRF DE+E+ RAMTEMNG+ CS+RPMRIG A  K
Sbjct: 177 RASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASK 236

Query: 282 K-ASGYQQGYSSQALVLAGGHANGMAVQGPQDGESNNTTIFVGGLDSDVSDEDLKQTFSK 341
           K  +G +  Y S A  +              D + NNTT+FVGGLD+ V+D+ LK  FS+
Sbjct: 237 KGVTGQRDSYQSSAAGVT------------TDNDPNNTTVFVGGLDASVTDDHLKNVFSQ 296

Query: 342 FGEIVSVKIPIGKGCGFVQFANR 363
           +GEIV VKIP GK CGFVQF+ +
Sbjct: 297 YGEIVHVKIPAGKRCGFVQFSEK 306

[Close]

BLAST of Carg24057 vs. Swiss-Prot
Match: sp|Q9LEB3|RBP47_NICPL (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP47 PE=1 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 8.7e-109
Identity = 189/270 (70.00%), Postives = 237/270 (87.78%), Query Frame = 0


Query: 103 TDDVKTLWIGDLQAWMDETYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATAD 162
           ++D KT+WIGDLQ WMDE+YLH+CF+  GEV SVK+I NKQTGQSE YGFVEF +HA A+
Sbjct: 80  SEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAE 139

Query: 163 KVLQNYNGAMMPNTDLPFRLNWATFSGNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSS 222
           KVLQ+YNG MMPNT+ PFRLNWA FS  ++R +TGSD SIFVGDLA+DVTD ML++TF+S
Sbjct: 140 KVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTFAS 199

Query: 223 KYTSVKGAKVVIDSNSGRSKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKA 282
           +Y S+KGAKVV+D+N+G SKGYGFVRFGDE+E+SRAMTEMNG+YCSSR MRIGVATPKK 
Sbjct: 200 RYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKP 259

Query: 283 SGYQQGYSSQALVLAGGHA-NGMAVQGPQ-DGESNNTTIFVGGLDSDVSDEDLKQTFSKF 342
           S ++Q YSSQA++L+GG+A NG A  G Q DG+S+NTTIFVGGLDS+V+DE+L+Q+F++F
Sbjct: 260 SAHEQ-YSSQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDEELRQSFNQF 319

Query: 343 GEIVSVKIPIGKGCGFVQFANRYSSYFSVE 371
           GE+VSVKIP GKGCGFVQF++R S+  +++
Sbjct: 320 GEVVSVKIPAGKGCGFVQFSDRSSAQEAIQ 348

[Close]

BLAST of Carg24057 vs. Swiss-Prot
Match: sp|Q0WW84|RB47B_ARATH (Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B PE=2 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 2.8e-107
Identity = 192/273 (70.33%), Postives = 228/273 (83.52%), Query Frame = 0


Query: 101 GSTDDVKTLWIGDLQAWMDETYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHAT 160
           GS DDVKTLW+GDL  WMDETYLH+CF+HTGEV SVKVI NK T QSEGYGFVEF S A 
Sbjct: 102 GSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAA 161

Query: 161 ADKVLQNYNGAMMPNTDLPFRLNWATFS-GNDRRPDTGSDLSIFVGDLAADVTDAMLQET 220
           A++VLQNY+G++MPN+D PFR+NWA+FS G  R  + G DLS+FVGDL+ DVTD +L ET
Sbjct: 162 AEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHET 221

Query: 221 FSSKYTSVKGAKVVIDSNSGRSKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATP 280
           FS +Y SVK AKVVIDSN+GRSKGYGFVRFGDENE+SRA+TEMNG YCS+R MR+G+ATP
Sbjct: 222 FSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATP 281

Query: 281 KKASGYQQGYSSQALVLAGGH-ANGMAVQGPQ-DGESNNTTIFVGGLDSDVSDEDLKQTF 340
           K+A   QQ +SSQA++LAGGH +NG    G Q DGES N TIFVGG+D DV DEDL+Q F
Sbjct: 282 KRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPF 341

Query: 341 SKFGEIVSVKIPIGKGCGFVQFANRYSSYFSVE 371
           S+FGE+VSVKIP+GKGCGFVQFA+R S+  ++E
Sbjct: 342 SQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIE 374

[Close]

BLAST of Carg24057 vs. Swiss-Prot
Match: sp|F4I3B3|RB47A_ARATH (Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A PE=2 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 1.6e-102
Identity = 184/261 (70.50%), Postives = 215/261 (82.38%), Query Frame = 0


Query: 106 VKTLWIGDLQAWMDETYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVL 165
           VKTLW+GDL  WMDETYLH CF+HT EV SVKVI NKQT QSEGYGFVEF S + A++ L
Sbjct: 118 VKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEAL 177

Query: 166 QNYNGAMMPNTDLPFRLNWATFS-GNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKY 225
           Q+++G  MPN + PFRLNWA+FS G  R  + G DLSIFVGDLA DV+DA+L ETF+ +Y
Sbjct: 178 QSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRY 237

Query: 226 TSVKGAKVVIDSNSGRSKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKASG 285
            SVKGAKVVIDSN+GRSKGYGFVRFGDENE+SRAMTEMNG +CSSR MR+G+ATPK+A+ 
Sbjct: 238 PSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAA 297

Query: 286 YQQGYSSQALVLAGGHANGMAVQGPQDGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIV 345
           Y Q   SQAL LAGGH    ++    DGESNN+TIFVGGLD+DV++EDL Q FS FGE+V
Sbjct: 298 YGQQNGSQALTLAGGHGGNGSM---SDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVV 357

Query: 346 SVKIPIGKGCGFVQFANRYSS 366
           SVKIP+GKGCGFVQFANR S+
Sbjct: 358 SVKIPVGKGCGFVQFANRQSA 375

[Close]

BLAST of Carg24057 vs. Swiss-Prot
Match: sp|Q9SX80|R47CP_ARATH (Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C' PE=2 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 7.4e-92
Identity = 175/267 (65.54%), Postives = 206/267 (77.15%), Query Frame = 0


Query: 107 KTLWIGDLQAWMDETYLHNCF--AHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKV 166
           KT+W+GDLQ WMDE YL++ F  A   E+ S+KVI NK  G SEGYGFVEF SH  ADKV
Sbjct: 103 KTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVADKV 162

Query: 167 LQNYNGAMMPNTDLPFRLNWATFS-GNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSK 226
           LQ +NGA MPNTD PFRLNWA+FS G  R  + G DLSIFVGDLA DV+DA+L ETFS K
Sbjct: 163 LQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDALLHETFSEK 222

Query: 227 YTSVKGAKVVIDSNSGRSKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKAS 286
           Y SVK AKVV+D+N+GRSKGYGFVRFGDENE+++AMTEMNG+ CSSR MRIG ATP+K +
Sbjct: 223 YPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTN 282

Query: 287 GYQQGYSSQALVLAGGHANGMAVQGPQDGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEI 346
           GYQQ          GG+    A     +G++ NTTIFVGGLDS V+DEDLKQ FS+FGEI
Sbjct: 283 GYQQ---------QGGYMPSGAFT-RSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEI 342

Query: 347 VSVKIPIGKGCGFVQFANRYSSYFSVE 371
           VSVKIP+GKGCGFVQF NR ++  ++E
Sbjct: 343 VSVKIPVGKGCGFVQFVNRPNAEEALE 359

[Close]

BLAST of Carg24057 vs. Swiss-Prot
Match: sp|Q9SX79|RB47C_ARATH (Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C PE=2 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 3.4e-89
Identity = 170/267 (63.67%), Postives = 203/267 (76.03%), Query Frame = 0


Query: 107 KTLWIGDLQAWMDETYLHNCFA--HTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKV 166
           KT+W+GDL  WMDE YL++ FA     E+ SVKVI NK  G SEGYGFVEF SH  ADKV
Sbjct: 101 KTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKV 160

Query: 167 LQNYNGAMMPNTDLPFRLNWATFS-GNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSK 226
           L+ +NG  MPNTD PFRLNWA+FS G  R  + G DLSIFVGDL+ DV+D +L ETFS K
Sbjct: 161 LREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEK 220

Query: 227 YTSVKGAKVVIDSNSGRSKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKAS 286
           Y SVK AKVV+D+N+GRSKGYGFVRFGDENE+++AMTEMNG+ CSSR MRIG ATP+K +
Sbjct: 221 YPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTN 280

Query: 287 GYQQGYSSQALVLAGGHANGMAVQGPQDGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEI 346
           GYQQ          GG+     +  P +G+  NTTIFVGGLDS V+DEDLKQ F++FGEI
Sbjct: 281 GYQQ---------QGGYMPNGTLTRP-EGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEI 340

Query: 347 VSVKIPIGKGCGFVQFANRYSSYFSVE 371
           VSVKIP+GKGCGFVQF NR ++  ++E
Sbjct: 341 VSVKIPVGKGCGFVQFVNRPNAEEALE 357

[Close]

BLAST of Carg24057 vs. TrEMBL
Match: tr|A0A1S3C9N4|A0A1S3C9N4_CUCME (polyadenylate-binding protein RBP47 OS=Cucumis melo OX=3656 GN=LOC103498402 PE=4 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 4.0e-135
Identity = 326/363 (89.81%), Postives = 339/363 (93.39%), Query Frame = 0


Query: 1   MAQPSNAADLNPQAPHPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAQPSN ADLNPQAPHPH       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAQPSNGADLNPQAPHPH-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTDDVKTLWIGDLQAWMDE 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    GSTD+VKTLWIGDLQ WMDE
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRQGSTDEVKTLWIGDLQPWMDE 120

Query: 121 TYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPF 180
           TYL+NCFAHTGEV SVKVICNKQTGQSEGYGFVEF+SH TA+KVLQNYNG +MPNT+LPF
Sbjct: 121 TYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPF 180

Query: 181 RLNWATFSGNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGR 240
           RLNWATFS NDRRPDTGSDLSIFVGDLAADVTDAMLQETFSS+YTSVKGAKVVIDSNSGR
Sbjct: 181 RLNWATFSANDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGR 240

Query: 241 SKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGH 300
           SKGYGFVRFGDENE++RAM EMNGIYCSSRPMRIGVATPKKASGYQQGY+SQALVLAGGH
Sbjct: 241 SKGYGFVRFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGH 300

Query: 301 ANGMAVQGPQ-DGESNNTTIFVGGLDSDVSDEDLKQTFSKFGEIVSVKIPIGKGCGFVQF 360
            NGMAVQG Q D ESNNTTIFVGGLDSDVSDEDLK  FSKFG+++SVKIPIGKGCGFVQF
Sbjct: 301 PNGMAVQGSQSDSESNNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQF 356

Query: 361 ANR 363
           ANR
Sbjct: 361 ANR 356

[Close]

BLAST of Carg24057 vs. TrEMBL
Match: tr|A0A2I4FVA7|A0A2I4FVA7_9ROSI (polyadenylate-binding protein RBP47-like isoform X1 OS=Juglans regia OX=51240 GN=LOC109002343 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 2.6e-126
Identity = 226/272 (83.09%), Postives = 251/272 (92.28%), Query Frame = 0


Query: 101 GSTDDVKTLWIGDLQAWMDETYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHAT 160
           GS D+VKT+WIGDL  WMDE+YLHNCFAHTGEVFSVKVI NKQTGQSEGYGFVEFYSH+T
Sbjct: 106 GSADEVKTIWIGDLHHWMDESYLHNCFAHTGEVFSVKVIRNKQTGQSEGYGFVEFYSHST 165

Query: 161 ADKVLQNYNGAMMPNTDLPFRLNWATFSGNDRRPDTGSDLSIFVGDLAADVTDAMLQETF 220
           A+KVLQ+YNGA+MPNT+ PFRLNWATFS  D+R D GSDLSIFVGDLAADVTDAMLQETF
Sbjct: 166 AEKVLQSYNGAVMPNTEQPFRLNWATFSAGDKRSDVGSDLSIFVGDLAADVTDAMLQETF 225

Query: 221 SSKYTSVKGAKVVIDSNSGRSKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPK 280
           +S+Y SVKGAKVVIDSN+GRSKGYGFVRFGDE+E+SRA+TEMNG+YCSSRPMR+GVATPK
Sbjct: 226 ASRYPSVKGAKVVIDSNTGRSKGYGFVRFGDESERSRAITEMNGMYCSSRPMRLGVATPK 285

Query: 281 KASGYQQGYSSQALVLAGGHA-NGMAVQGPQ-DGESNNTTIFVGGLDSDVSDEDLKQTFS 340
           K+SGYQQ YSSQALVLAGGHA NG   QG Q DGESNNTTIFVGGLDSDVSDEDL+Q FS
Sbjct: 286 KSSGYQQQYSSQALVLAGGHASNGAVTQGSQSDGESNNTTIFVGGLDSDVSDEDLRQPFS 345

Query: 341 KFGEIVSVKIPIGKGCGFVQFANRYSSYFSVE 371
           +FGEIVSVKIP+GKGCGFVQFANR ++  ++E
Sbjct: 346 QFGEIVSVKIPVGKGCGFVQFANRKNAEDAME 377

[Close]

BLAST of Carg24057 vs. TrEMBL
Match: tr|A0A2I4FVA5|A0A2I4FVA5_9ROSI (polyadenylate-binding protein RBP47-like isoform X2 OS=Juglans regia OX=51240 GN=LOC109002343 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 5.1e-122
Identity = 221/272 (81.25%), Postives = 246/272 (90.44%), Query Frame = 0


Query: 101 GSTDDVKTLWIGDLQAWMDETYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHAT 160
           GS D+VKT+WIGDL  WMDE+YLHNCFAHTGEVFSVKVI NKQTGQSEGYGFVEFYSH+T
Sbjct: 106 GSADEVKTIWIGDLHHWMDESYLHNCFAHTGEVFSVKVIRNKQTGQSEGYGFVEFYSHST 165

Query: 161 ADKVLQNYNGAMMPNTDLPFRLNWATFSGNDRRPDTGSDLSIFVGDLAADVTDAMLQETF 220
           A+KVLQ+YNGA+MPNT+ PFRLNWATFS  D+R D GSDLSIFVGDLAADVTDAMLQETF
Sbjct: 166 AEKVLQSYNGAVMPNTEQPFRLNWATFSAGDKRSDVGSDLSIFVGDLAADVTDAMLQETF 225

Query: 221 SSKYTSVKGAKVVIDSNSGRSKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPK 280
           +S+Y SVKGAKVVIDSN+GRSKGYGFVRFGDE+E+SRA+TEMNG+YCSSRPMR+GVATPK
Sbjct: 226 ASRYPSVKGAKVVIDSNTGRSKGYGFVRFGDESERSRAITEMNGMYCSSRPMRLGVATPK 285

Query: 281 KASGYQQGYSSQALVLAGGHA-NGMAVQGPQ-DGESNNTTIFVGGLDSDVSDEDLKQTFS 340
           K+SGYQQ YSSQ     GGHA NG   QG Q DGESNNTTIFVGGLDSDVSDEDL+Q FS
Sbjct: 286 KSSGYQQQYSSQ-----GGHASNGAVTQGSQSDGESNNTTIFVGGLDSDVSDEDLRQPFS 345

Query: 341 KFGEIVSVKIPIGKGCGFVQFANRYSSYFSVE 371
           +FGEIVSVKIP+GKGCGFVQFANR ++  ++E
Sbjct: 346 QFGEIVSVKIPVGKGCGFVQFANRKNAEDAME 372

[Close]

BLAST of Carg24057 vs. TrEMBL
Match: tr|A0A2I4GDJ0|A0A2I4GDJ0_9ROSI (polyadenylate-binding protein RBP47-like isoform X1 OS=Juglans regia OX=51240 GN=LOC109006960 PE=4 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 1.1e-121
Identity = 214/263 (81.37%), Postives = 239/263 (90.87%), Query Frame = 0


Query: 101 GSTDDVKTLWIGDLQAWMDETYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHAT 160
           GS D+VKT+WIGDL  WMDE Y+HNCF HTGEV SVKVI NKQTGQSEGYGFVEFYSHAT
Sbjct: 81  GSPDEVKTIWIGDLHHWMDEAYVHNCFGHTGEVISVKVIRNKQTGQSEGYGFVEFYSHAT 140

Query: 161 ADKVLQNYNGAMMPNTDLPFRLNWATFSGNDRRPDTGSDLSIFVGDLAADVTDAMLQETF 220
           A+K LQ YNGAMMPNT+ PFRLNWATF   D+R D GS+LS+FVGDLAADVTDAMLQETF
Sbjct: 141 AEKFLQTYNGAMMPNTEQPFRLNWATFGAGDKRSDAGSELSLFVGDLAADVTDAMLQETF 200

Query: 221 SSKYTSVKGAKVVIDSNSGRSKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPK 280
           +++Y SVKGAKVVIDSN+GRSKGYGFVRFGDENE+SRA+TEMNG+YCSSRPMR+GVATPK
Sbjct: 201 ATRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAITEMNGMYCSSRPMRLGVATPK 260

Query: 281 KASGYQQGYSSQALVLAGGHANGMAVQGPQ-DGESNNTTIFVGGLDSDVSDEDLKQTFSK 340
           K++G+QQ YSSQALVLAGG A+   +QG Q DGESNNTTIFVGGLDSDVSDEDL+Q FS+
Sbjct: 261 KSAGHQQQYSSQALVLAGGQASNGVIQGSQSDGESNNTTIFVGGLDSDVSDEDLRQPFSQ 320

Query: 341 FGEIVSVKIPIGKGCGFVQFANR 363
           FGEIVSVKIP+GKGCGFVQF+NR
Sbjct: 321 FGEIVSVKIPVGKGCGFVQFSNR 343

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BLAST of Carg24057 vs. TrEMBL
Match: tr|A0A067JJK7|A0A067JJK7_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_01681 PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 6.2e-120
Identity = 214/263 (81.37%), Postives = 242/263 (92.02%), Query Frame = 0


Query: 102 STDDVKTLWIGDLQAWMDETYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATA 161
           + +DVKT+WIGDL  WMDE YLHNCF+HTGEV +VKVI NKQTGQSEGYGFVEF+SHATA
Sbjct: 92  AAEDVKTIWIGDLLNWMDEPYLHNCFSHTGEVSTVKVIRNKQTGQSEGYGFVEFHSHATA 151

Query: 162 DKVLQNYNGAMMPNTDLPFRLNWATFSGNDRRPDTGSDLSIFVGDLAADVTDAMLQETFS 221
           +KVLQNYNG++MPNT+ PFRLNWA+F+G DRR D+GSDLSIFVGDLA DVTD+MLQETF+
Sbjct: 152 EKVLQNYNGSVMPNTEQPFRLNWASFAG-DRRADSGSDLSIFVGDLATDVTDSMLQETFA 211

Query: 222 SKYTSVKGAKVVIDSNSGRSKGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPKK 281
           SKY+SVKGAKVV D N+GRSKGYGFVRFGDENE+SRAM+EMNG+YCSSRPMRIGVATPKK
Sbjct: 212 SKYSSVKGAKVVTDLNTGRSKGYGFVRFGDENERSRAMSEMNGVYCSSRPMRIGVATPKK 271

Query: 282 ASGYQQGYSSQALVLAGGHA-NGMAVQGPQ-DGESNNTTIFVGGLDSDVSDEDLKQTFSK 341
           +S YQQ YSSQALVLAGGHA NG   QG Q DG+SNNTTIFVGG+DSD+SDEDL+Q FS+
Sbjct: 272 SSAYQQQYSSQALVLAGGHAPNGAIAQGSQSDGDSNNTTIFVGGIDSDISDEDLRQPFSQ 331

Query: 342 FGEIVSVKIPIGKGCGFVQFANR 363
           FGE+VSVKIP+GKGCGFVQFANR
Sbjct: 332 FGEVVSVKIPVGKGCGFVQFANR 353

The following BLAST results are available for this feature:

BLAST of Carg24057 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947439.1	4.8e-148	95.68	polyadenylate-binding protein RBP47-like [Cucurbita moschata]	[more]
XP_023533349.1	4.8e-148	95.41	polyadenylate-binding protein RBP47 [Cucurbita pepo subsp. pepo]	[more]
XP_023007482.1	1.2e-146	96.23	polyadenylate-binding protein RBP47-like [Cucurbita maxima]	[more]
XP_023512881.1	5.7e-141	92.31	polyadenylate-binding protein RBP47B-like [Cucurbita pepo subsp. pepo]	[more]
XP_022943942.1	7.4e-141	90.30	polyadenylate-binding protein RBP47-like [Cucurbita moschata]	[more]

BLAST of Carg24057 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G19130.1	1.5e-108	70.33	RNA-binding protein 47B	[more]
AT1G49600.1	8.8e-104	70.50	RNA-binding protein 47A	[more]
AT1G47500.1	4.1e-93	65.54	RNA-binding protein 47C'	[more]
AT1G47490.1	1.9e-90	63.67	RNA-binding protein 47C	[more]
AT1G11650.2	1.7e-83	59.32	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

BLAST of Carg24057 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LEB3\|RBP47_NICPL	8.7e-109	70.00	Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
sp\|Q0WW84\|RB47B_ARATH	2.8e-107	70.33	Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B P...	[more]
sp\|F4I3B3\|RB47A_ARATH	1.6e-102	70.50	Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A P...	[more]
sp\|Q9SX80\|R47CP_ARATH	7.4e-92	65.54	Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C'...	[more]
sp\|Q9SX79\|RB47C_ARATH	3.4e-89	63.67	Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C P...	[more]

BLAST of Carg24057 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C9N4\|A0A1S3C9N4_CUCME	4.0e-135	89.81	polyadenylate-binding protein RBP47 OS=Cucumis melo OX=3656 GN=LOC103498402 PE=4...	[more]
tr\|A0A2I4FVA7\|A0A2I4FVA7_9ROSI	2.6e-126	83.09	polyadenylate-binding protein RBP47-like isoform X1 OS=Juglans regia OX=51240 GN...	[more]
tr\|A0A2I4FVA5\|A0A2I4FVA5_9ROSI	5.1e-122	81.25	polyadenylate-binding protein RBP47-like isoform X2 OS=Juglans regia OX=51240 GN...	[more]
tr\|A0A2I4GDJ0\|A0A2I4GDJ0_9ROSI	1.1e-121	81.37	polyadenylate-binding protein RBP47-like isoform X1 OS=Juglans regia OX=51240 GN...	[more]
tr\|A0A067JJK7\|A0A067JJK7_JATCU	6.2e-120	81.37	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_01681 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR035979	RBD_domain_sf
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR000504	RRM_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24057-RA	Carg24057-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 201..275 e-value: 8.3E-17 score: 71.8 coord: 318..386 e-value: 3.9E-11 score: 53.0 coord: 108..181 e-value: 4.8E-13 score: 59.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 319..363 e-value: 4.2E-13 score: 48.8 coord: 109..177 e-value: 2.1E-12 score: 46.6 coord: 202..272 e-value: 2.9E-14 score: 52.5
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 317..402 score: 13.891
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 107..187 score: 14.368
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 200..279 score: 17.063
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 191..293 e-value: 1.0E-21 score: 79.2 coord: 61..190 e-value: 4.1E-27 score: 96.7
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 309..365 e-value: 3.0E-16 score: 61.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..99
None	No IPR available	PANTHER	PTHR43955:SF6	POLYADENYLATE-BINDING PROTEIN RBP47A-RELATED	coord: 9..365
None	No IPR available	PANTHER	PTHR43955	FAMILY NOT NAMED	coord: 9..365
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 108..188 e-value: 7.09643E-44 score: 148.18
None	No IPR available	CDD	cd12345	RRM2_SECp43_like	coord: 199..278 e-value: 2.81005E-45 score: 151.663
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	SSF54928	RNA-binding domain, RBD	coord: 200..366
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	SSF54928	RNA-binding domain, RBD	coord: 70..192

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24057	Cla010259	Watermelon (97103) v1	carwmB1053
Carg24057	Csa2G234550	Cucumber (Chinese Long) v2	carcuB1068
Carg24057	MELO3C021906	Melon (DHL92) v3.5.1	carmeB1022
Carg24057	ClCG09G017440	Watermelon (Charleston Gray)	carwcgB1025
Carg24057	CSPI02G11600	Wild cucumber (PI 183967)	carcpiB1090
Carg24057	Cucsa.085240	Cucumber (Gy14) v1	carcgyB1168
Carg24057	CmaCh02G004430	Cucurbita maxima (Rimu)	carcmaB1460
Carg24057	CmaCh20G008920	Cucurbita maxima (Rimu)	carcmaB1459
Carg24057	CmoCh02G004520	Cucurbita moschata (Rifu)	carcmoB1415
Carg24057	CmoCh20G008990	Cucurbita moschata (Rifu)	carcmoB1414
Carg24057	Lsi10G003040	Bottle gourd (USVL1VR-Ls)	carlsiB961
Carg24057	Cp4.1LG16g02040	Cucurbita pepo (Zucchini)	carcpeB1468
Carg24057	Cp4.1LG05g12120	Cucurbita pepo (Zucchini)	carcpeB1469
Carg24057	CsGy2G011610	Cucumber (Gy14) v2	carcgybB1037
Carg24057	MELO3C021906.2	Melon (DHL92) v3.6.1	carmedB1035
Carg24057	CsaV3_2G014110	Cucumber (Chinese Long) v3	carcucB1101
Carg24057	Cla97C09G178870	Watermelon (97103) v2	carwmbB1112
Carg24057	Bhi10G001695	Wax gourd	carwgoB1239

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg24057	Carg23614	Silver-seed gourd	carcarB620

The following block(s) are covering this gene:

None